Psyllid ID: psy17162

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
MRSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITLW
Secondary Structure (PSIPRED)
ccEEEcEEEcccEEEEEEEccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHcccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEcEEEccccEEEEEEEcccccHHHHHHHcccHHHHHHHHHHHHHHHHcccEEHcccccccEEEEccHcccccccEEEEEcccccHHHHHHHHHcccccccccccccccEEccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccccccHHHHHHHHcc
Coil and Loop (DISEMBL)
mrsiravfnqdeigvtvssvkttddkkVVLVTGKGEAEKVQKELETLRCIYIqdyhlcvrstryfsvdTFHQRLQFLLHLFRFALSGNQDDLLIIRGlygadcdpnfirperidpsgnpsnydirsDVWSLGISLIELatgrfpydtwgspfeqlkqvvqddpprlppgefssdfkdFITLW
Flexible Loop (DISEMBL)
mrsiravfnqdeigvtvssvkttddkkvvlvtgkgeaekvqKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRperidpsgnpsnYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPprlppgefssdfkdfitlw
Low Complexity Region (SEG)
MRSIRAVFNQDEIGvtvssvkttddkkvvlvtgkgEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTfhqrlqfllhlfrfALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITLW
Disordered region (IsUnstruct)
******VFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPE*********NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQL***************************
Disordered Region (DISOPRED)
MRSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP*****EFSSDFKDFITLW
Disordered Region (DISEMBL)
MRSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITLW
Disordered Region (DISPRO)
MRSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITLW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITLW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	182	2.2.26 [Sep-21-2011]
Q9DGE0	361	Dual specificity mitogen-	yes	N/A	0.571	0.288	0.467	2e-22
P70236	334	Dual specificity mitogen-	yes	N/A	0.906	0.494	0.356	2e-22
P52564	334	Dual specificity mitogen-	yes	N/A	0.434	0.236	0.55	9e-22
Q5E9X2	334	Dual specificity mitogen-	yes	N/A	0.434	0.236	0.55	1e-21
O09110	347	Dual specificity mitogen-	no	N/A	0.434	0.227	0.537	2e-21
P46734	347	Dual specificity mitogen-	no	N/A	0.423	0.221	0.551	3e-21
P47809	397	Dual specificity mitogen-	no	N/A	0.554	0.254	0.514	9e-21
Q07192	446	Dual specificity mitogen-	N/A	N/A	0.549	0.224	0.509	1e-20
P45985	399	Dual specificity mitogen-	no	N/A	0.554	0.253	0.514	1e-20
Q4KSH7	419	Dual specificity mitogen-	no	N/A	0.395	0.171	0.552	1e-15

>sp|Q9DGE0|MP2K6_DANRE Dual specificity mitogen-activated protein kinase kinase 6 OS=Danio rerio GN=map2k6 PE=1 SV=2

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 72/107 (67%), Gaps = 3/107 (2%)

Query: 74  LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI 133
           +Q  + +  F +SG   D   +     A C P ++ PERI+P  N   Y+++SD+WSLGI
Sbjct: 216 MQGQVKMCDFGISGYLVDS--VAKTMDAGCKP-YMAPERINPETNQKGYNVKSDIWSLGI 272

Query: 134 SLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
           ++IELA  RFPYD+WG+PF+QLKQVV++  P+LP   FS+DF DF +
Sbjct: 273 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADRFSADFVDFTS 319

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Phosphorylation by MAP2K6 asymmetrically activates p38 on one side of the blastodisc, an event which is necessary for blastomere cleavage.
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 2

>sp|P70236|MP2K6_MOUSE Dual specificity mitogen-activated protein kinase kinase 6 OS=Mus musculus GN=Map2k6 PE=1 SV=1

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 20/185 (10%)

Query: 6   AVFNQDEIGVTVSSVKTTDDKKVVLVTGKGE----------AEKVQKELETLRCIYIQDY 55
           A+F + ++ + +  + T+ DK    V  KG+          A  + K LE L    +   
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVI 176

Query: 56  HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDP 115
           H  V+ +    ++T  Q     + +  F +SG   D   +     A C P ++ PERI+P
Sbjct: 177 HRDVKPSNVL-INTLGQ-----VKMCDFGISGYLVDS--VAKTIDAGCKP-YMAPERINP 227

Query: 116 SGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDF 175
             N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV++  P+LP  +FS+DF
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSADF 287

Query: 176 KDFIT 180
            DF +
Sbjct: 288 VDFTS 292

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P52564|MP2K6_HUMAN Dual specificity mitogen-activated protein kinase kinase 6 OS=Homo sapiens GN=MAP2K6 PE=1 SV=1

 Score =  103 bits (256), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct: 214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +  P+LP  +FS++F DF +
Sbjct: 273 EPSPQLPADKFSAEFVDFTS 292

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q5E9X2|MP2K6_BOVIN Dual specificity mitogen-activated protein kinase kinase 6 OS=Bos taurus GN=MAP2K6 PE=2 SV=1

 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct: 214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +  P+LP  +FS +F DF +
Sbjct: 273 EPSPQLPADKFSEEFVDFTS 292

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|O09110|MP2K3_MOUSE Dual specificity mitogen-activated protein kinase kinase 3 OS=Mus musculus GN=Map2k3 PE=1 SV=2

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 62/80 (77%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   Y+++SDVWSLGI++IE+A  RFPY++WG+PF+QLKQVV+
Sbjct: 225 AGCKP-YMAPERINPELNQKGYNVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 283

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +  P+LP  +FS +F DF +
Sbjct: 284 EPSPQLPADQFSPEFVDFTS 303

Dual specificity kinase. Is activated by cytokines and environmental stress in vivo. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinase p38.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P46734|MP2K3_HUMAN Dual specificity mitogen-activated protein kinase kinase 3 OS=Homo sapiens GN=MAP2K3 PE=1 SV=2

 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 1/78 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   Y+++SDVWSLGI++IE+A  RFPY++WG+PF+QLKQVV+
Sbjct: 225 AGCKP-YMAPERINPELNQKGYNVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 283

Query: 161 DDPPRLPPGEFSSDFKDF 178
           +  P+LP   FS +F DF
Sbjct: 284 EPSPQLPADRFSPEFVDF 301

Dual specificity kinase. Is activated by cytokines and environmental stress in vivo. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinase p38.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P47809|MP2K4_MOUSE Dual specificity mitogen-activated protein kinase kinase 4 OS=Mus musculus GN=Map2k4 PE=1 SV=2

 Score = 99.8 bits (247), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 6/107 (5%)

Query: 78  LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE 137
           + L  F +SG   D   I     A C P ++ PERIDPS +   YD+RSDVWSLGI+L E
Sbjct: 241 IKLCDFGISGQLVD--SIAKTRDAGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYE 297

Query: 138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG---EFSSDFKDFITL 181
           LATGRFPY  W S F+QL QVV+ DPP+L      EFS  F +F+ L
Sbjct: 298 LATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNL 344

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K7/MKK7, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The phosphorylation of the Thr residue by MAP2K7/MKK7 seems to be the prerequisite for JNK activation at least in response to proinflammatory cytokines, while other stimuli activate both MAP2K4/MKK4 and MAP2K7/MKK7 which synergistically phosphorylate JNKs. MAP2K4 is required for maintaining peripheral lymphoid homeostasis. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis. Whereas MAP2K7/MKK7 exclusively activates JNKs, MAP2K4/MKK4 additionally activates the p38 MAPKs MAPK11, MAPK12, MAPK13 and MAPK14.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q07192|MP2K2_XENLA Dual specificity mitogen-activated protein kinase kinase 2 (Fragment) OS=Xenopus laevis GN=map2k2 PE=1 SV=1

 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 65/106 (61%), Gaps = 6/106 (5%)

Query: 78  LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE 137
           + L  F +SG   D   I     A C P ++ PERIDPS +   YD+RSDVWSLGI+L E
Sbjct: 290 IKLCDFGISGQLVD--SIAKTRDAGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYE 346

Query: 138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG---EFSSDFKDFIT 180
           LATGRFPY  W S F+QL QVV+ DPP+L      EFS  F  F+ 
Sbjct: 347 LATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFTSFVN 392

Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P45985|MP2K4_HUMAN Dual specificity mitogen-activated protein kinase kinase 4 OS=Homo sapiens GN=MAP2K4 PE=1 SV=1

 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 67/107 (62%), Gaps = 6/107 (5%)

Query: 78  LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE 137
           + L  F +SG   D   I     A C P ++ PERIDPS +   YD+RSDVWSLGI+L E
Sbjct: 243 IKLCDFGISGQLVD--SIAKTRDAGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYE 299

Query: 138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG---EFSSDFKDFITL 181
           LATGRFPY  W S F+QL QVV+ DPP+L      EFS  F +F+ L
Sbjct: 300 LATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNL 346

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K7/MKK7, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The phosphorylation of the Thr residue by MAP2K7/MKK7 seems to be the prerequisite for JNK activation at least in response to proinflammatory cytokines, while other stimuli activate both MAP2K4/MKK4 and MAP2K7/MKK7 which synergistically phosphorylate JNKs. MAP2K4 is required for maintaining peripheral lymphoid homeostasis. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis. Whereas MAP2K7/MKK7 exclusively activates JNKs, MAP2K4/MKK4 additionally activates the p38 MAPKs MAPK11, MAPK12, MAPK13 and MAPK14.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q4KSH7|MP2K7_RAT Dual specificity mitogen-activated protein kinase kinase 7 OS=Rattus norvegicus GN=Map2k7 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 57/76 (75%), Gaps = 4/76 (5%)

Query: 107 FIRPERIDPSGNPS--NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           ++ PERIDP  +P+  +YDIR+DVWSLGISL+ELATG+FPY    + FE L +V+Q++PP
Sbjct: 283 YMAPERIDPP-DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP 341

Query: 165 RLPPGE-FSSDFKDFI 179
            LP    FS DF+ F+
Sbjct: 342 LLPGHMGFSGDFQSFV 357

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K4/MKK4, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4/MKK4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The monophosphorylation of JNKs on the Thr residue is sufficient to increase JNK activity indicating that MAP2K7/MKK7 is important to trigger JNK activity, while the additional phosphorylation of the Tyr residue by MAP2K4/MKK4 ensures optimal JNK activation. Has a specific role in JNK signal transduction pathway activated by proinflammatory cytokines. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
242015216	337	cAMP-dependent protein kinase catalytic	0.434	0.234	0.787	1e-31
261335949	336	putative mitogen-activated protein kinas	0.434	0.235	0.762	3e-30
443429407	336	dual specificity mitogen-activated prote	0.434	0.235	0.762	3e-30
193702398	338	PREDICTED: dual specificity mitogen-acti	0.428	0.230	0.759	9e-30
91088903	334	PREDICTED: similar to licorne CG12244-PA	0.434	0.236	0.762	9e-30
357608811	271	putative mitogen-activated protein kinas	0.434	0.291	0.75	1e-29
289739559	329	mitogen-activated protein kinase kinase	0.434	0.240	0.725	1e-29
149728109	330	mitogen-activated protein kinase [Lutzom	0.439	0.242	0.716	3e-29
307167495	336	Dual specificity mitogen-activated prote	0.434	0.235	0.725	4e-29
194764057	335	GF21403 [Drosophila ananassae] gi|190619	0.439	0.238	0.703	8e-29

>gi|242015216|ref|XP_002428268.1| cAMP-dependent protein kinase catalytic subunit, putative [Pediculus humanus corporis] gi|212512842|gb|EEB15530.1| cAMP-dependent protein kinase catalytic subunit, putative [Pediculus humanus corporis]

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/80 (78%), Positives = 72/80 (90%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDP+GNPSNYDIRSDVWSLGISLIELATG+FPY +WG+PFEQLKQVV 
Sbjct: 212 AGCKP-YMAPERIDPTGNPSNYDIRSDVWSLGISLIELATGKFPYKSWGTPFEQLKQVVT 270

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DDPP+LP G+FS+DF DFIT
Sbjct: 271 DDPPKLPQGQFSNDFDDFIT 290

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|261335949|emb|CBH09282.1| putative mitogen-activated protein kinase (MAPKK) [Heliconius melpomene]

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDPSGNP  YDIRSDVWSLGIS+IELATG+FPY+TWG+PFEQLKQVV+
Sbjct: 212 AGCKP-YMAPERIDPSGNPGQYDIRSDVWSLGISMIELATGKFPYNTWGTPFEQLKQVVK 270

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DDPP LP G+FSS+F+D IT
Sbjct: 271 DDPPSLPSGQFSSEFEDLIT 290

Source: Heliconius melpomene

Species: Heliconius melpomene

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443429407|gb|AGC92692.1| dual specificity mitogen-activated protein kinase kinase 6-like protein [Heliconius erato]

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDPSGNP  YDIRSDVWSLGIS+IELATG+FPY+TWG+PFEQLKQVV+
Sbjct: 212 AGCKP-YMAPERIDPSGNPGQYDIRSDVWSLGISMIELATGKFPYNTWGTPFEQLKQVVK 270

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DDPP LP G+FSS+F+D IT
Sbjct: 271 DDPPSLPSGQFSSEFEDLIT 290

Source: Heliconius erato

Species: Heliconius erato

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193702398|ref|XP_001952170.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 6-like [Acyrthosiphon pisum]

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 71/79 (89%), Gaps = 1/79 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDP+GNPSNYDIRSD+WSLGISL+ELATG+FPYDTWG+PFEQLKQVV+
Sbjct: 210 AGCKP-YMAPERIDPTGNPSNYDIRSDIWSLGISLVELATGKFPYDTWGTPFEQLKQVVK 268

Query: 161 DDPPRLPPGEFSSDFKDFI 179
           D+PPRL  G F+S F+DFI
Sbjct: 269 DEPPRLSTGMFTSYFEDFI 287

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088903|ref|XP_972852.1| PREDICTED: similar to licorne CG12244-PA [Tribolium castaneum] gi|270011581|gb|EFA08029.1| hypothetical protein TcasGA2_TC005618 [Tribolium castaneum]

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 70/80 (87%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDP GNPS YDIRSDVWSLGISLIELATG+FPY  WGSPFEQLKQVV 
Sbjct: 210 AGCKP-YMAPERIDPQGNPSQYDIRSDVWSLGISLIELATGQFPYPRWGSPFEQLKQVVT 268

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DDPPRLP G+F+++F+DFI+
Sbjct: 269 DDPPRLPSGQFTAEFEDFIS 288

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357608811|gb|EHJ66158.1| putative mitogen-activated protein kinase [Danaus plexippus]

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 70/80 (87%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDPSGNP  YDIRSDVWSLGIS+IELATG+FPY+TWG+PFEQLKQVV+
Sbjct: 147 AGCKP-YMAPERIDPSGNPGQYDIRSDVWSLGISMIELATGKFPYNTWGTPFEQLKQVVE 205

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DDPP LP G+FS +F+D IT
Sbjct: 206 DDPPSLPIGQFSPEFEDIIT 225

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289739559|gb|ADD18527.1| mitogen-activated protein kinase kinase MKK3/MKK6 [Glossina morsitans morsitans]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 71/80 (88%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDP+GNP+ YDIRSDVWSLGIS+IE+ATG+FPY +W +PFEQL+QVV+
Sbjct: 207 AGCKP-YMAPERIDPTGNPAQYDIRSDVWSLGISMIEMATGKFPYKSWKTPFEQLRQVVK 265

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DDPPRL PG FS+DF+DFIT
Sbjct: 266 DDPPRLEPGAFSTDFEDFIT 285

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|149728109|gb|ABR28347.1| mitogen-activated protein kinase [Lutzomyia longipalpis]

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 70/81 (86%), Gaps = 1/81 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDP+GNP  YDIRSDVWSLGIS+IE+ATG+FPY TWGSPFEQLKQVV 
Sbjct: 208 AGCKP-YMAPERIDPTGNPGQYDIRSDVWSLGISMIEMATGKFPYSTWGSPFEQLKQVVT 266

Query: 161 DDPPRLPPGEFSSDFKDFITL 181
           DDPPR+ PG+FS +F +FI++
Sbjct: 267 DDPPRVEPGKFSPEFTNFISV 287

Source: Lutzomyia longipalpis

Species: Lutzomyia longipalpis

Genus: Lutzomyia

Family: Psychodidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167495|gb|EFN61068.1| Dual specificity mitogen-activated protein kinase kinase 6 [Camponotus floridanus]

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 70/80 (87%), Gaps = 1/80 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDPSGNPS YDIRSDVWSLGISL+ELATG+FPY++WG+PFEQLKQVV+
Sbjct: 209 AGCKP-YMAPERIDPSGNPSQYDIRSDVWSLGISLVELATGKFPYESWGTPFEQLKQVVK 267

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           DD P+LP G+FS  F++FI 
Sbjct: 268 DDAPKLPAGKFSPSFEEFIN 287

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194764057|ref|XP_001964148.1| GF21403 [Drosophila ananassae] gi|190619073|gb|EDV34597.1| GF21403 [Drosophila ananassae]

 Score =  132 bits (331), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 70/81 (86%), Gaps = 1/81 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDP GNP+ YDIRSDVWSLGIS+IE+ATGRFPYD W +PFEQL+QVV+
Sbjct: 207 AGCKP-YMAPERIDPQGNPAQYDIRSDVWSLGISMIEMATGRFPYDNWRTPFEQLRQVVE 265

Query: 161 DDPPRLPPGEFSSDFKDFITL 181
           +DPPRLP G+FS +F+DFI +
Sbjct: 266 EDPPRLPAGKFSPEFEDFIAV 286

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
FB|FBgn0261524	335	lic "licorne" [Drosophila mela	0.439	0.238	0.679	2.4e-28
ZFIN|ZDB-GENE-010202-3	363	map2k6 "mitogen-activated prot	0.423	0.212	0.576	3.4e-22
MGI|MGI:1346870	334	Map2k6 "mitogen-activated prot	0.423	0.230	0.576	5.5e-22
RGD|620666	334	Map2k6 "mitogen-activated prot	0.423	0.230	0.576	5.5e-22
UNIPROTKB|F1NHE1	258	MAP2K3 "Uncharacterized protei	0.423	0.298	0.576	7e-22
UNIPROTKB|F1NMX4	346	MAP2K3 "Uncharacterized protei	0.423	0.222	0.576	7e-22
UNIPROTKB|F1NVF2	335	Gga.13002 "Uncharacterized pro	0.423	0.229	0.564	1.5e-21
UNIPROTKB|P52564	334	MAP2K6 "Dual specificity mitog	0.423	0.230	0.564	1.5e-21
UNIPROTKB|Q5E9X2	334	MAP2K6 "Dual specificity mitog	0.423	0.230	0.564	1.9e-21
UNIPROTKB|E2R7W7	334	MAP2K6 "Uncharacterized protei	0.423	0.230	0.564	1.9e-21

FB|FBgn0261524 lic "licorne" [Drosophila melanogaster (taxid:7227)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 55/81 (67%), Positives = 67/81 (82%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERIDP GNP+ YDIRSDVWSLGI +IE+ATGR+PYD W +PFEQL+QVV+
Sbjct:   207 AGCKP-YMAPERIDPQGNPAQYDIRSDVWSLGIGMIEMATGRYPYDNWRTPFEQLRQVVE 265

Query:   161 DDPPRLPPGEFSSDFKDFITL 181
             D PPRLP G FS +F+DFI +
Sbjct:   266 DSPPRLPEGTFSPEFEDFIAV 286

GO:0004708 "MAP kinase kinase activity" evidence=ISS;NAS;IDA;TAS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IGI

GO:0007309 "oocyte axis specification" evidence=IMP

GO:0000187 "activation of MAPK activity" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;NAS

GO:0007314 "oocyte anterior/posterior axis specification" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0002385 "mucosal immune response" evidence=IMP

GO:0001934 "positive regulation of protein phosphorylation" evidence=IGI

GO:0045793 "positive regulation of cell size" evidence=IGI;IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0048082 "regulation of adult chitin-containing cuticle pigmentation" evidence=IGI

ZFIN|ZDB-GENE-010202-3 map2k6 "mitogen-activated protein kinase kinase 6" [Danio rerio (taxid:7955)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 45/78 (57%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y+++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   243 AGCKP-YMAPERINPETNQKGYNVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 301

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP   FS+DF DF
Sbjct:   302 EPSPQLPADRFSADFVDF 319

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

MGI|MGI:1346870 Map2k6 "mitogen-activated protein kinase kinase 6" [Mus musculus (taxid:10090)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 45/78 (57%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP  +FS+DF DF
Sbjct:   273 EPSPQLPADKFSADFVDF 290

GO:0000165 "MAPK cascade" evidence=IPI

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IDA;IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019901 "protein kinase binding" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0060048 "cardiac muscle contraction" evidence=IMP

RGD|620666 Map2k6 "mitogen-activated protein kinase kinase 6" [Rattus norvegicus (taxid:10116)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 45/78 (57%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP  +FS+DF DF
Sbjct:   273 EPSPQLPADKFSADFVDF 290

GO:0000165 "MAPK cascade" evidence=IEA;ISO

GO:0000187 "activation of MAPK activity" evidence=IEA;ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEP

GO:0019901 "protein kinase binding" evidence=IEA;ISO

GO:0042493 "response to drug" evidence=IEP

GO:0043065 "positive regulation of apoptotic process" evidence=IMP

GO:0060048 "cardiac muscle contraction" evidence=IEA;ISO

UNIPROTKB|F1NHE1 MAP2K3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 45/78 (57%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y+++SDVWSLGI++IELA  RFPY++WG+PF+QLKQVV+
Sbjct:   136 AGCKP-YMAPERINPELNQKGYNVKSDVWSLGITMIELAILRFPYESWGTPFQQLKQVVE 194

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LPP  FS +F DF
Sbjct:   195 EPSPQLPPERFSKEFVDF 212

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

UNIPROTKB|F1NMX4 MAP2K3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 45/78 (57%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y+++SDVWSLGI++IELA  RFPY++WG+PF+QLKQVV+
Sbjct:   224 AGCKP-YMAPERINPELNQKGYNVKSDVWSLGITMIELAILRFPYESWGTPFQQLKQVVE 282

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LPP  FS +F DF
Sbjct:   283 EPSPQLPPERFSKEFVDF 300

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0006954 "inflammatory response" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

UNIPROTKB|F1NVF2 Gga.13002 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 44/78 (56%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   215 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 273

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP  +FS++F DF
Sbjct:   274 EPSPQLPADKFSAEFVDF 291

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000165 "MAPK cascade" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

UNIPROTKB|P52564 MAP2K6 "Dual specificity mitogen-activated protein kinase kinase 6" [Homo sapiens (taxid:9606)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 44/78 (56%), Positives = 61/78 (78%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP  +FS++F DF
Sbjct:   273 EPSPQLPADKFSAEFVDF 290

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0004708 "MAP kinase kinase activity" evidence=TAS

GO:0006975 "DNA damage induced protein phosphorylation" evidence=TAS

GO:0007050 "cell cycle arrest" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0035872 "nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway" evidence=TAS

GO:0042692 "muscle cell differentiation" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0051149 "positive regulation of muscle cell differentiation" evidence=TAS

GO:0051403 "stress-activated MAPK cascade" evidence=TAS

GO:0070423 "nucleotide-binding oligomerization domain containing signaling pathway" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5E9X2 MAP2K6 "Dual specificity mitogen-activated protein kinase kinase 6" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 44/78 (56%), Positives = 60/78 (76%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP  +FS +F DF
Sbjct:   273 EPSPQLPADKFSEEFVDF 290

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0000165 "MAPK cascade" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E2R7W7 MAP2K6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 44/78 (56%), Positives = 60/78 (76%)

Query:   101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct:   214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

Query:   161 DDPPRLPPGEFSSDFKDF 178
             +  P+LP  +FS +F DF
Sbjct:   273 EPSPQLPADKFSEEFVDF 290

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0000165 "MAPK cascade" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5E9X2	MP2K6_BOVIN	2, ., 7, ., 1, 2, ., 2	0.55	0.4340	0.2365	yes	N/A
P52564	MP2K6_HUMAN	2, ., 7, ., 1, 2, ., 2	0.55	0.4340	0.2365	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	182
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-41
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-34
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	9e-32
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-30
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-21
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	9e-20
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-18
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-17
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-13
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-12
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-12
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-12
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	8e-12
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-10
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-10
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	6e-10
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	9e-10
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-09
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-09
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-09
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-08
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-08
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	8e-08
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	6e-06
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-05
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-05
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	6e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	8e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.001
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.001
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.001
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.001
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.002
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.002
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.002
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	0.003
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.003
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.003
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.003
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	0.003
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.004
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.004

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score =  139 bits (353), Expect = 3e-41
 Identities = 47/82 (57%), Positives = 64/82 (78%), Gaps = 1/82 (1%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   YD++SDVWSLGI++IELATGRFPYD+W +PF+QLKQVV+
Sbjct: 164 AGCKP-YMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE 222

Query: 161 DDPPRLPPGEFSSDFKDFITLW 182
           +  P+LP  +FS +F+DF+   
Sbjct: 223 EPSPQLPAEKFSPEFQDFVNKC 244

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score =  122 bits (308), Expect = 2e-34
 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 5/84 (5%)

Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDPS     YD+RSDVWSLGI+L E+ATG+FPY  W S F+QL QVV+
Sbjct: 168 AGCRP-YMAPERIDPSARDG-YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK 225

Query: 161 DDPPRLPPG---EFSSDFKDFITL 181
            DPP L      EFS  F +FI L
Sbjct: 226 GDPPILSNSEEREFSPSFVNFINL 249

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  114 bits (288), Expect = 9e-32
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 8/80 (10%)

Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY----DTWGSPFEQLKQVVQD 161
           +++ PERI  +     Y ++SD+WSLG+SLIELATGRFPY    D     FE L+ +V +
Sbjct: 164 SYMAPERIQGND----YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE 219

Query: 162 DPPRLPPGEFSSDFKDFITL 181
            PPRLP G+FS DF+DF+ L
Sbjct: 220 PPPRLPSGKFSPDFQDFVNL 239

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score =  112 bits (282), Expect = 1e-30
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV 159
            A C   ++ PERIDP      YDIR+DVWSLGISL+ELATG+FPY    + FE L +++
Sbjct: 174 SAGC-AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL 232

Query: 160 QDDPPRLPPGE-FSSDFKDFITL 181
           Q++PP LPP E FS DF  F+ L
Sbjct: 233 QEEPPSLPPNEGFSPDFCSFVDL 255

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 86.9 bits (216), Expect = 4e-21
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 6/74 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY--DTWGSPFEQLKQVVQDDPPRLP 167
           PERI   G   +Y   +D+WSLG++L+E A G+FP+      S FE ++ +    PP LP
Sbjct: 169 PERIQ--GESYSYA--ADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLP 224

Query: 168 PGEFSSDFKDFITL 181
             EFS +F+DFI+ 
Sbjct: 225 AEEFSPEFRDFISA 238

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 83.4 bits (206), Expect = 9e-20
 Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 7/81 (8%)

Query: 106 NFIRPERI---DPSGNPSNYDIRSDVWSLGISLIELATGRFPY--DTWGSPFEQLKQVVQ 160
           +++ PERI    P+ NP+ Y ++SDVWSLG+S++E+A GR+PY  +T+ + F QL  +V 
Sbjct: 166 SYMAPERIKSGGPNQNPT-YTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD 224

Query: 161 DDPPRLPPGEFSSDFKDFITL 181
            DPP LP G +S D +DF+  
Sbjct: 225 GDPPTLPSG-YSDDAQDFVAK 244

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 80.3 bits (198), Expect = 2e-18
 Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 10/80 (12%)

Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY----DTWGS--PFEQLKQVVQ 160
           ++ PERI  SG    Y I SDVWSLGIS +ELA GRFPY       GS  P + L+ +V 
Sbjct: 159 YMAPERI--SGE--QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD 214

Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +DPP LP G+FS  F  FIT
Sbjct: 215 EDPPVLPVGQFSEKFVHFIT 234

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 77.5 bits (191), Expect = 2e-17
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 14/83 (16%)

Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY-------DTWGSP---FEQLK 156
           ++ PERI        Y ++SDVWSLGIS+IELA G+FP+       D    P    + L+
Sbjct: 168 YMSPERI----QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ 223

Query: 157 QVVQDDPPRLPPGEFSSDFKDFI 179
           Q+VQ+ PPRLP  +F  D +DF+
Sbjct: 224 QIVQEPPPRLPSSDFPEDLRDFV 246

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 67.5 bits (165), Expect = 8e-14
 Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 13/79 (16%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS----PFEQLKQVVQDDPPR 165
           PERI   G P  Y I SDVWSLG++L+E+A  RFP+   G     P E L  +V    P 
Sbjct: 172 PERI--QGKP--YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE 227

Query: 166 LP--PGE---FSSDFKDFI 179
           L   PG    +S +FKDFI
Sbjct: 228 LKDEPGNGIKWSEEFKDFI 246

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 6/78 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  +G P  YD ++D+WSLGI+ IELA G+ PY     P + L ++  + PP
Sbjct: 161 PYWMAPEVI--NGKP--YDYKADIWSLGITAIELAEGKPPYSELP-PMKALFKIATNGPP 215

Query: 165 RLPPGEFSSD-FKDFITL 181
            L   E  SD FKDF+  
Sbjct: 216 GLRNPEKWSDEFKDFLKK 233

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 64.9 bits (159), Expect = 5e-13
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE +   G    Y    D+WSLG+ L EL TG+ P+       E  K++ +  PP
Sbjct: 160 PEYMAPEVLLGKG----YGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP 215

Query: 165 -RLPPGEFSSDFKDFI 179
              P  + S + KD I
Sbjct: 216 FPPPEWDISPEAKDLI 231

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           S YD ++D+WSLGI+ IELA G  P      P   L  + +++PP L   +FS  FKDF+
Sbjct: 173 SGYDEKADIWSLGITAIELAKGEPPLSDL-HPMRVLFLIPKNNPPSLEGNKFSKPFKDFV 231

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I+ SG        SD+WSLG ++IEL TG  PY    +P   L ++VQDD P
Sbjct: 163 PYWMAPEVIEMSG----ASTASDIWSLGCTVIELLTGNPPYYD-LNPMAALFRIVQDDHP 217

Query: 165 RLPPGEFSSDFKDFIT 180
            LP G  S + KDF+ 
Sbjct: 218 PLPEG-ISPELKDFLM 232

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 39/108 (36%)

Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP---------------------- 144
           ++ PER+      ++Y ++SD+WSLG+SL+E+A GR+P                      
Sbjct: 164 YMSPERL----QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEA 219

Query: 145 ----YDTWGSP---------FEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
                   G P         FE L  +V + PP+LP G FS +F+DF+
Sbjct: 220 KESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFV 267

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 62.0 bits (151), Expect = 6e-12
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 5/64 (7%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGE----FSSDFKD 177
           YD ++D+WS GI+ IELATG  PY  +  P + L   +Q+DPP L  G     +S  F+ 
Sbjct: 184 YDFKADIWSFGITAIELATGAAPYSKY-PPMKVLMLTLQNDPPSLETGADYKKYSKSFRK 242

Query: 178 FITL 181
            I+L
Sbjct: 243 MISL 246

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 61.5 bits (150), Expect = 8e-12
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 105 PNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPY-DTWGSPFEQLKQVVQDD 162
           P ++ PE I     P ++YD RSDVWSLGI+ IELA G+ P  D    P   L ++ ++ 
Sbjct: 177 PYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM--HPMRALFKIPRNP 234

Query: 163 PPRL-PPGEFSSDFKDFIT 180
           PP L  P  +S  F DFI+
Sbjct: 235 PPTLKSPENWSKKFNDFIS 253

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 59.0 bits (143), Expect = 7e-11
 Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL-PPGEFSSDFKDFIT 180
           YD ++D+WSLGI+LIELA    P+    +P   L ++++ +PP L  P ++SS F DF+ 
Sbjct: 185 YDYKADIWSLGITLIELAQMEPPHHEL-NPMRVLLKILKSEPPTLDQPSKWSSSFNDFLK 243

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I        Y+ ++D+WSLGI+ IE+A G+ PY     P   +  +    PP
Sbjct: 163 PFWMAPEVI----QEIGYNNKADIWSLGITAIEMAEGKPPYSDI-HPMRAIFMIPNKPPP 217

Query: 165 RLP-PGEFSSDFKDFI 179
            L  P ++S +F DF+
Sbjct: 218 TLSDPEKWSPEFNDFV 233

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 57.9 bits (140), Expect = 2e-10
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q+D P
Sbjct: 175 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNDSP 232

Query: 165 RLPPGEFSSDFKDFITL 181
            L   ++S  F++F+  
Sbjct: 233 TLSSNDWSDYFRNFVDS 249

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 57.1 bits (138), Expect = 3e-10
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I        YD ++D+WSLGI++ E+ATG  PY      F  +  + +  PP
Sbjct: 165 PYWMAPEVITEG---KYYDTKADIWSLGITIYEMATGNPPYSDV-DAFRAMMLIPKSKPP 220

Query: 165 RLPPGEFSSDFKDFITL 181
           RL    +S   ++F+  
Sbjct: 221 RLEDNGYSKLLREFVAA 237

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 56.6 bits (136), Expect = 6e-10
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 49/120 (40%)

Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD---------TWGSP----- 151
           +++ PER+      ++Y ++SD+WS+G+SL+ELA GR+P            +G P     
Sbjct: 167 SYMSPERL----QGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGE 222

Query: 152 -------------------------------FEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                                          FE L  +V + PP+LP G F+ DF++F+ 
Sbjct: 223 EGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVN 282

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 55.8 bits (134), Expect = 9e-10
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 105 PNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P ++ PE I    NP + YD RSD+WSLGI+ IE+A G  P      P   L  + ++ P
Sbjct: 185 PYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPP 243

Query: 164 PRLPPGEFSSDFKDFI 179
           P+L   ++S  F DFI
Sbjct: 244 PKLKSKKWSKKFIDFI 259

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 55.8 bits (134), Expect = 1e-09
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 47/117 (40%)

Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 167 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDP 222

Query: 145 --YDTWGSP--------------------FEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
              +T   P                    FE L  +V + PP+LP G F ++F+DF+
Sbjct: 223 AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFV 279

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 54.7 bits (131), Expect = 2e-09
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 80  LFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA 139
           L  F ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA
Sbjct: 142 LADFGVAGQLTDTQIKRNTFVGT--PFWMAPEVIKQSA----YDFKADIWSLGITAIELA 195

Query: 140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
            G  P      P   L  + ++ PP L  G++S  FK+F+
Sbjct: 196 KGEPPNSDL-HPMRVLFLIPKNSPPTL-EGQYSKPFKEFV 233

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGE-FSSDFKDF 178
            +Y  + D+WSLGI  IE+A G  PY     P   L  +     P L   E +S +FKDF
Sbjct: 191 KDYGPKVDIWSLGIMCIEMAEGEPPYLRE-PPLRALFLITTKGIPPLKNPEKWSPEFKDF 249

Query: 179 I 179
           +
Sbjct: 250 L 250

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 53.9 bits (129), Expect = 4e-09
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFI 179
           YD ++DVWSLGI+LIE+A    P+    +P   L ++ + +PP L  P  +SS+FKDF+
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSEFKDFL 242

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 8/100 (8%)

Query: 80  LFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA 139
           L  F ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA
Sbjct: 142 LADFGVAGQLTDTQIKRNTFVGT--PFWMAPEVIQQSA----YDSKADIWSLGITAIELA 195

Query: 140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
            G  P ++   P   L  + +++PP L  GEFS  FK+FI
Sbjct: 196 KGE-PPNSDMHPMRVLFLIPKNNPPTL-TGEFSKPFKEFI 233

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV-QDDP 163
           P ++ PE I        Y   +D+WSLG ++IE+ATG+ P+   G+P   L ++    +P
Sbjct: 167 PYWMAPEVIRGEE----YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP 222

Query: 164 PRLPPGEFSSDFKDFI 179
           P +P    S + KDF+
Sbjct: 223 PEIPEH-LSEEAKDFL 237

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 52.0 bits (124), Expect = 2e-08
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL-PPGEFSSDFKDF 178
           + YD ++D+WSLGI+LIE+A    P+    +P   L ++ + +PP L  P ++S +F+DF
Sbjct: 190 TPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSEPPTLSQPSKWSMEFRDF 248

Query: 179 I 179
           +
Sbjct: 249 L 249

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 11/81 (13%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV----- 159
           P ++ PE +   G    Y  + DVWSLG+ L EL TG+ P+   G       Q++     
Sbjct: 162 PWYMAPEVL--LGGN-GYGPKVDVWSLGVILYELLTGKPPF--SGENILDQLQLIRRILG 216

Query: 160 -QDDPPRLPPGEFSSDFKDFI 179
              +         S + KD I
Sbjct: 217 PPLEFDEPKWSSGSEEAKDLI 237

Length = 260

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 50.9 bits (121), Expect = 5e-08
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 105 PNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P ++ PE I    NP + YD +SD+WSLGI+ IE+A G  P      P   L  + ++  
Sbjct: 175 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPA 233

Query: 164 PRLPPGEFSSDFKDFI 179
           PRL   ++S  F+ FI
Sbjct: 234 PRLKSKKWSKKFQSFI 249

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 51.0 bits (122), Expect = 6e-08
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 10/81 (12%)

Query: 107 FIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDT-----WGSPFEQLKQVVQ 160
           ++ PERI+   N   YD    D+WSLG+S++E   GRFP+       W S    +  +  
Sbjct: 234 YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS---LMCAICM 290

Query: 161 DDPPRLPPGEFSSDFKDFITL 181
             PP   P   S +F+ FI+ 
Sbjct: 291 SQPPE-APATASREFRHFISC 310

Length = 353

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 78  LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE 137
           + L  F ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IE
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGT--PFWMAPEVIKQSA----YDSKADIWSLGITAIE 193

Query: 138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           LA G  P+     P + L  + +++PP L  G +S   K+F+
Sbjct: 194 LAKGEPPHSEL-HPMKVLFLIPKNNPPTL-EGNYSKPLKEFV 233

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL-PPGEFSSDFKDF 178
           S YD R DVWSLGI+ IEL  G  P      P   L ++ ++ PP L  P  +S++F DF
Sbjct: 204 STYDARCDVWSLGITAIELGDGDPPLADL-HPMRALFKIPRNPPPTLHQPELWSNEFNDF 262

Query: 179 IT 180
           I 
Sbjct: 263 IR 264

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 48.1 bits (114), Expect = 5e-07
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP-YDTWGSPFEQLKQVVQDDP 163
           P ++ PERI  +G    Y+ +SD+WSLG  L E+A  + P Y    + F   +++ Q D 
Sbjct: 170 PYYMSPERIHENG----YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY 225

Query: 164 PRLPPGEFSSDFKDFITL 181
           P LP   +S   ++ +++
Sbjct: 226 PPLPTEHYSEKLRELVSM 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.4 bits (113), Expect = 8e-07
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 19/85 (22%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQ--------LK 156
           P ++ PERI  +G    Y+ +SD+WSLG  L E+A  +       SPF           K
Sbjct: 170 PYYMSPERIHENG----YNFKSDIWSLGCLLYEMAALQ-------SPFYGDKMNLYSLCK 218

Query: 157 QVVQDDPPRLPPGEFSSDFKDFITL 181
           ++ + D P LP   +S + +D ++ 
Sbjct: 219 KIEKCDYPPLPADHYSEELRDLVSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP-YDTWGSPFEQLKQVVQDDP 163
           P ++ PERI  +G    Y+ +SD+WSLG  L E+A  + P Y    + +   K++ Q D 
Sbjct: 170 PYYMSPERIHENG----YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 225

Query: 164 PRLPPGEFSSDFKDFITL 181
           P LP   +S + +  + +
Sbjct: 226 PPLPSDHYSEELRQLVNM 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 46.7 bits (109), Expect = 2e-06
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPF--EQLKQVVQ 160
             P ++ PE +    + +     SD+WSLGI+L EL TG  P++   +     Q  +++ 
Sbjct: 170 GTPGYMAPEVL-LGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228

Query: 161 DDPPRLPPGEFSSDFKDFITLW 182
           + P        S    + I+  
Sbjct: 229 ELPTPSLASPLSPSNPELISKA 250

Length = 384

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ-DDP 163
           P ++ PE I   G    Y + +D+WSLG +++E+ATG+ P+    S  E +  V +    
Sbjct: 165 PYWMAPEVIAQQGG---YGLAADIWSLGCTVLEMATGKPPW----SQLEGVAAVFKIGRS 217

Query: 164 PRLP--PGEFSSDFKDFITL 181
             LP  P   S + KDFI  
Sbjct: 218 KELPPIPDHLSDEAKDFILK 237

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQV--VQDDPP 164
           ++ PE ID    P  Y   +D+WSLG +++E+ATG+ P+   G P   + +V   +  P 
Sbjct: 175 YMAPEVIDKG--PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPE 232

Query: 165 RLPPGEFSSDFKDFI 179
              P   S++ K+FI
Sbjct: 233 --IPESLSAEAKNFI 245

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q+D P
Sbjct: 181 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNDSP 238

Query: 165 RLPPGEFSSDFKDFI 179
            L   E++  F+ F+
Sbjct: 239 TLQSNEWTDSFRGFV 253

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 44.4 bits (106), Expect = 7e-06
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
           Y    D WSLG+ L E+ TG+ P+  +    +++ + +  DP R P    S + +D I+
Sbjct: 170 YGKAVDWWSLGVLLYEMLTGKPPF--YAEDRKEIYEKILKDPLRFPEF-LSPEARDLIS 225

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE++  +     YD +SD+WSLG  + EL     P+        QL   +++   
Sbjct: 174 PYYMSPEQL--NHMS--YDEKSDIWSLGCLIYELCALSPPFT--ARNQLQLASKIKEGKF 227

Query: 165 RLPPGEFSSDFKDFITL 181
           R  P  +SS+  + I  
Sbjct: 228 RRIPYRYSSELNEVIKS 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRS-DVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P ++ PE I  +G       R+ D+WSLG  ++E+ATG+ P+    + F+ +  V     
Sbjct: 167 PAYMAPEVI--TGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHK 224

Query: 164 PRLP-PGEFSSDFKDFI 179
           P +P   + S + KDF+
Sbjct: 225 PPIPDSLQLSPEGKDFL 241

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP-YDTWGSPFEQLKQVVQD-- 161
           P ++ PE          YD + D+W+LGI+ IELA  + P +D    P   L  + +   
Sbjct: 165 PYWMAPEVAAVERK-GGYDGKCDIWALGITAIELAELQPPMFDL--HPMRALFLISKSNF 221

Query: 162 DPPRLP-PGEFSSDFKDFIT 180
            PP+L    ++S  F DFI 
Sbjct: 222 PPPKLKDKEKWSPVFHDFIK 241

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 43.6 bits (104), Expect = 1e-05
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQL-KQVVQDDPPRLPPGEFSSDFKDFI 179
           Y+ +SD+WSLG  L EL T + P++  G    +L  ++++   P +P   +SS+ ++ +
Sbjct: 180 YNYKSDIWSLGCVLYELCTLKHPFE--GENLLELALKILKGQYPPIPSQ-YSSELRNLV 235

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q++ P
Sbjct: 185 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP 242

Query: 165 RLPPGEFSSDFKDFI 179
            L   E+S  F++F+
Sbjct: 243 TLQSNEWSDYFRNFV 257

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFP-YDTWGSPFEQLKQVVQDDPPRL-PPGEFSSDFKD 177
            +YD R DVWSLGI+ IEL  G  P +D    P + L ++ ++ PP L  P ++   F  
Sbjct: 208 YSYDARCDVWSLGITAIELGDGDPPLFDM--HPVKTLFKIPRNPPPTLLHPEKWCRSFNH 265

Query: 178 FIT 180
           FI+
Sbjct: 266 FIS 268

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  S  P  Y    D+WSLGI +IE+  G  PY     P + +K++  + PP
Sbjct: 179 PYWMAPEVI--SRLP--YGTEVDIWSLGIMVIEMVDGEPPYFN-EPPLQAMKRIRDNLPP 233

Query: 165 RLP-PGEFSSDFKDFITL 181
           +L    + S   + F+  
Sbjct: 234 KLKNLHKVSPRLRSFLDR 251

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP-PRLPPGEFSSDFKDFI 179
           Y  +SD+WSLG  L E+AT   P++      + L+  VQ    P +PP  +S D ++FI
Sbjct: 178 YSYKSDIWSLGCLLYEMATFAPPFE--ARSMQDLRYKVQRGKYPPIPP-IYSQDLQNFI 233

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 42.0 bits (98), Expect = 6e-05
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q++ P
Sbjct: 175 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP 232

Query: 165 RLPPGEFSSDFKDFI 179
            L  G +S  F++F+
Sbjct: 233 ALQSGHWSEYFRNFV 247

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I   G    Y  ++DVWS+G +++E+ T + P+  + +     K   Q   P
Sbjct: 171 PYWMSPEVISGEG----YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP 226

Query: 165 RLPPGEFSSDFKDFITL 181
           +LP    S D ++F+  
Sbjct: 227 QLPS-HVSPDARNFLRR 242

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFI 179
           Y  + D+WSLGI  IE+  G  PY    +P   L  +  +  P L  P + S+ F+DF+
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFL 249

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG---SPFEQLKQVVQDDP 163
           ++ PE I   G    +D   D WSLG+   EL TG  P+   G   S  E  +++++  P
Sbjct: 172 YMAPEVI--RGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP 229

Query: 164 PRLPPGEFSSDFKDFI 179
           P   P   S++ +DFI
Sbjct: 230 PF--PKTMSAEARDFI 243

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 15/100 (15%)

Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            L G   ++L  + ++G    P ++ PE I+ SG    Y  +SD+WS+G ++ E+ATG+ 
Sbjct: 156 GLHGTHSNML--KSMHGT---PYWMAPEVINESG----YGRKSDIWSIGCTVFEMATGKP 206

Query: 144 PYDTWGS--PFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT 180
           P     S      +  +          P  FS+   DF+T
Sbjct: 207 P---LASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVT 243

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P++I PE +  S  P  Y    D W+LG+ L E+  G+ P++  G   ++L Q + +D  
Sbjct: 160 PDYIAPEIL--SYQP--YGPAVDWWALGVLLYEMLAGQSPFE--GDDEDELFQSILEDEV 213

Query: 165 RLPPGEFSSDFKDFIT 180
           R P    S + K  + 
Sbjct: 214 RYPRW-LSKEAKSILK 228

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           +  +SDVWS G+ L E+ T G  PY    S  E L+ +      RLP 
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEQPYPGM-SNEEVLELLEDG--YRLPR 225

Length = 258

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD----DPP 164
           PE        + + I+SDVWS GI L E+ T GR PY    +  E L+QV Q      PP
Sbjct: 173 PEAA----LYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-EVLQQVDQGYRMPCPP 227

Query: 165 RLPP 168
             P 
Sbjct: 228 GCPK 231

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE +  +  P+     SD+W+LG  + ++ TG+ P+    + +   +++++ +  
Sbjct: 186 AEYVSPELL--NEKPAGKS--SDLWALGCIIYQMLTGKPPFRG-SNEYLTFQKILKLEYS 240

Query: 165 RLPPGEFSSDFKDFIT 180
             PP  F  D KD I 
Sbjct: 241 -FPPN-FPPDAKDLIE 254

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 5/37 (13%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPY 145
           PE      N   + I+SDVWS GI L E+ T GR PY
Sbjct: 173 PEAA----NYGRFTIKSDVWSFGILLTEIVTYGRVPY 205

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I    + + Y    D+WSLGI +IE+  G  PY +  SP + +K++    PP
Sbjct: 181 PYWMAPEVI----SRTPYGTEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPP 235

Query: 165 RL 166
           +L
Sbjct: 236 KL 237

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 97  GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLK 156
           G+      P ++ PE I   G    Y  ++DVWSLG +++E+ T + P+  + +     K
Sbjct: 165 GIRSVTGTPYWMSPEVISGEG----YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK 220

Query: 157 QVVQDDPPRLPPGEFSSDFKDFI 179
              Q   P+L P   S   +DF+
Sbjct: 221 IATQPTNPQL-PSHISEHARDFL 242

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL 181
           Y+ +SDVW+LG+ L E  TG+ P+D        LK +    PP      +S      I  
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPV--SQMYSQQLAQLIDQ 235

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 97  GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLK 156
           G+      P ++ PE I   G    Y  ++D+WS+G +++E+ T + P+  + +     K
Sbjct: 165 GMKSVTGTPYWMSPEVISGEG----YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220

Query: 157 QVVQDDPPRLPPGEFSSDFKDFI 179
              Q   P LPP   S   +DF+
Sbjct: 221 IATQPTNPVLPP-HVSDHCRDFL 242

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 38.6 bits (89), Expect = 9e-04
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE +        Y  + D+WSLGI  IE+  G  PY    +P   L  +  +  P
Sbjct: 180 PYWMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP 234

Query: 165 RLP-PGEFSSDFKDFI 179
            L  P + S+ F+DF+
Sbjct: 235 ELQNPEKLSAIFRDFL 250

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPY 145
           PE I    N   + I+SDVWS GI L E+ T GR PY
Sbjct: 172 PEAI----NYGTFTIKSDVWSFGILLTEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE +        Y  + D+WSLGI  IE+  G  PY    +P   L  +  +  P
Sbjct: 179 PYWMAPEVVTRKA----YGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP 233

Query: 165 RLP-PGEFSSDFKDFI 179
            L  P   S+ F+DF+
Sbjct: 234 ELQNPERLSAVFRDFL 249

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE +        Y  + D+WSLGI  IE+  G  PY    +P   L  +  +  P
Sbjct: 179 PYWMAPEVVTRKA----YGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP 233

Query: 165 RLP-PGEFSSDFKDFI 179
            L  P + S  F+DF+
Sbjct: 234 ELQNPEKLSPIFRDFL 249

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I   G    Y  ++DVWS+  +++E+ T + P+  + +     K   Q   P
Sbjct: 173 PYWMSPEVISGEG----YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP 228

Query: 165 RLPPGEFSSDFKDFI 179
            LP G  S   +DF+
Sbjct: 229 MLPDG-VSDACRDFL 242

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  S  P  Y    D+WSLGI +IE+  G  PY     P + ++++  + PP
Sbjct: 182 PYWMAPEVI--SRLP--YGTEVDIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDNLPP 236

Query: 165 RLPPG-EFSSDFKDFITL 181
           R+    + SS  + F+ L
Sbjct: 237 RVKDSHKVSSVLRGFLDL 254

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPF--EQLKQVVQDDPPRLPPGEFSSDFKDF 178
           YD   D ++LG +L E+  GR P+         E+LK+   +     P  +FS + KD 
Sbjct: 171 YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPD-KFSPEAKDL 228

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS--PFEQ-----LKQ 157
           PN+I PE +       +Y    D W+LG+ + E+  GR P+D  G     +Q     L Q
Sbjct: 160 PNYIAPEIL----RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ 215

Query: 158 VVQDDPPRLP 167
           V+ +   R+P
Sbjct: 216 VILEKQIRIP 225

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPY 145
           + I+SDVWS GI L EL T GR PY
Sbjct: 180 FTIKSDVWSFGILLTELTTKGRVPY 204

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY 145
           P ++ PE I   G    YD   D WSLGI L EL TGR P+
Sbjct: 156 PEYVAPEIILNKG----YDFSVDYWSLGILLYELLTGRPPF 192

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFE--QLKQVVQDD 162
           P F+ PE +        YD   D ++LG++L E+   R P+   G   E  +LKQ + +D
Sbjct: 161 PGFMAPELL----QGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND 216

Query: 163 PPRLPPGEFSSDFKDF 178
               P  +FS   K F
Sbjct: 217 SVTYPD-KFSPASKSF 231

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  S  P  Y    D+WSLGI +IE+  G  PY     P + +K +  + PP
Sbjct: 180 PYWMAPELI--SRLP--YGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPP 234

Query: 165 RL 166
           +L
Sbjct: 235 KL 236

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 36.7 bits (86), Expect = 0.003
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDD 162
           +  +SDVWS G+ L E+ T G  PY       E++ + ++  
Sbjct: 184 FTSKSDVWSFGVLLWEIFTLGATPYPGL--SNEEVLEYLRKG 223

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 9/68 (13%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG-----SPFEQLKQVV 159
           PN+I PE +        Y    D W+LG+ + E+  GR P+D        +  + L QV+
Sbjct: 160 PNYIAPEIL----RGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI 215

Query: 160 QDDPPRLP 167
            + P R+P
Sbjct: 216 LEKPIRIP 223

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPYDTWGSP 151
           GA     +  PE I    N  ++ I+SDVWS GI L+E+ T GR PY    +P
Sbjct: 162 GAKFPIKWTAPEAI----NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 210

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
KOG0598|consensus	357		100.0
KOG0581|consensus	364		100.0
KOG0615|consensus	475		100.0
KOG0616|consensus	355		100.0
KOG0595|consensus	429		100.0
KOG0575|consensus	592		100.0
KOG0591|consensus	375		100.0
KOG0592|consensus	604		99.98
KOG0588|consensus	786		99.98
KOG0605|consensus	550		99.97
KOG0694|consensus	694		99.97
KOG0578|consensus	550		99.97
KOG0583|consensus	370		99.97
KOG0192|consensus	362		99.97
KOG0197|consensus	468		99.96
KOG0983|consensus	391		99.96
KOG0585|consensus	576		99.96
KOG0610|consensus	459		99.96
KOG0198|consensus	313		99.96
KOG4717|consensus	864		99.96
KOG0597|consensus	808		99.96
KOG0600|consensus	560		99.95
KOG0033|consensus	355		99.95
KOG4721|consensus	904		99.95
KOG0612|consensus	1317		99.95
KOG0614|consensus	732		99.95
KOG0593|consensus	396		99.95
KOG0599|consensus	411		99.95
KOG0658|consensus	364		99.95
KOG0574|consensus	502		99.95
KOG0984|consensus	282		99.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.95
KOG0611|consensus	668		99.95
KOG0582|consensus	516		99.95
KOG0201|consensus	467		99.95
KOG0660|consensus	359		99.95
KOG0589|consensus	426		99.94
KOG0594|consensus	323		99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.94
KOG0663|consensus	419		99.94
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.94
KOG0696|consensus	683		99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
KOG4645|consensus	1509		99.94
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.94
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
KOG0032|consensus	382		99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
KOG0604|consensus	400		99.93
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.93
KOG4279|consensus	1226		99.93
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.93
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.93
KOG0603|consensus	612		99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
KOG1095|consensus	1025		99.93
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.93
KOG0577|consensus	948		99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
KOG0986|consensus	591		99.93
PHA02988	283	hypothetical protein; Provisional	99.93
KOG0659|consensus	318		99.93
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.93
KOG0580|consensus	281		99.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.93
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
KOG0587|consensus	953		99.93
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.93
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.93
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.93
KOG1006|consensus	361		99.93
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.93
KOG0661|consensus	538		99.93
PTZ00283	496	serine/threonine protein kinase; Provisional	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.92
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.92
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.92
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.92
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.92
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.92
KOG0608|consensus	1034		99.92
KOG0193|consensus	678		99.92
KOG0579|consensus	1187		99.92
KOG1026|consensus	774		99.92
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.92
PTZ00036	440	glycogen synthase kinase; Provisional	99.91
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.91
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.91
KOG0586|consensus	596		99.91
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.91
KOG0667|consensus	586		99.91
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.91
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.91
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.91
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.91
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.91
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.91
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.91
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.91
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.91
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.91
KOG0194|consensus	474		99.9
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.9
KOG4236|consensus	888		99.9
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.9
KOG4250|consensus	732		99.9
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.9
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.9
KOG0596|consensus	677		99.9
KOG0690|consensus	516		99.9
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
KOG0196|consensus	996		99.9
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.9
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.9
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.9
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.9
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.9
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.9
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.9
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.9
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.9
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.9
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.9
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.9
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.9
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.9
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.9
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.9
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.89
KOG1989|consensus	738		99.89
KOG0607|consensus	463		99.89
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.89
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.89
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.89
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.89
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.89
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.89
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.89
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.89
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.89
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.89
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.89
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.89
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.89
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.89
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
KOG0584|consensus	632		99.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.89
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.89
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.89
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.89
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.89
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.89
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.89
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.89
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.88
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.88
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.88
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.88
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.88
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.88
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.88
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.88
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.88
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.88
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.88
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.88
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.88
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.88
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.88
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.88
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.88
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.88
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.88
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.88
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.88
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.88
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.88
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.88
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.88
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.88
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.88
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.88
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.88
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.88
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.88
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.88
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.88
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.88
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.88
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.88
PHA03212	391	serine/threonine kinase US3; Provisional	99.88
KOG0199|consensus	1039		99.88
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.88
PTZ00284	467	protein kinase; Provisional	99.88
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.88
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.88
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.88
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.88
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.88
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.88
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.87
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.87
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.87
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.87
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.87
KOG1187|consensus	361		99.87
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.87
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.87
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.87
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.87
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.87
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.87
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.87
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.87
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.87
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.87
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.87
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.87
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.87
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.87
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.87
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.87
KOG0695|consensus	593		99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.87
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.87
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.87
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.87
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.87
PHA03207	392	serine/threonine kinase US3; Provisional	99.87
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.87
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.87
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.87
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.87
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.86
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.86
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.86
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.86
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.86
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.86
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.86
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.86
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.86
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.86
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.86
PHA02882	294	putative serine/threonine kinase; Provisional	99.86
PHA03210	501	serine/threonine kinase US3; Provisional	99.86
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.86
KOG4278|consensus	1157		99.86
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.86
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.86
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.86
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.86
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.86
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.86
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.86
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.86
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.85
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.85
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.85
KOG0200|consensus	609		99.85
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.85
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.85
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.85
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.85
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.85
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.85
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.84
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.84
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.84
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.84
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.84
KOG4257|consensus	974		99.84
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.84
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.84
KOG0664|consensus	449		99.84
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.84
KOG0662|consensus	292		99.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.84
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.84
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.84
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.84
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.84
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
PLN00009	294	cyclin-dependent kinase A; Provisional	99.83
KOG1151|consensus	775		99.83
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.83
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.83
KOG2345|consensus	302		99.83
KOG1094|consensus	807		99.83
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.83
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.83
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.83
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.82
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.82
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.82
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.82
KOG0665|consensus	369		99.82
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.82
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.82
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.82
KOG0666|consensus	438		99.82
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.82
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.82
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.82
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.82
PHA03211	461	serine/threonine kinase US3; Provisional	99.82
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.82
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.81
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.81
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.81
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.81
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.81
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.81
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.81
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.81
PHA03209	357	serine/threonine kinase US3; Provisional	99.81
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.8
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.8
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.8
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.8
KOG2052|consensus	513		99.8
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.8
KOG0669|consensus	376		99.8
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.79
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.79
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.79
KOG1024|consensus	563		99.79
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.79
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.78
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.78
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.78
KOG0670|consensus	752		99.78
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.77
PLN00181	793	protein SPA1-RELATED; Provisional	99.76
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.76
KOG1035|consensus	1351		99.75
KOG0668|consensus	338		99.75
KOG1025|consensus	1177		99.75
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.75
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.75
KOG1152|consensus	772		99.74
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.73
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.72
KOG3653|consensus	534		99.72
KOG1027|consensus	903		99.72
KOG1345|consensus	378		99.71
KOG0671|consensus	415		99.71
KOG0603|consensus	612		99.7
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.68
KOG0576|consensus	829		99.66
KOG0606|consensus	1205		99.63
KOG0195|consensus	448		99.53
KOG0590|consensus	601		99.47
KOG1167|consensus	418		99.41
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.33
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.33
PRK09188	365	serine/threonine protein kinase; Provisional	99.29
KOG1033|consensus	516		99.28
KOG4158|consensus	598		99.21
PRK12274	218	serine/threonine protein kinase; Provisional	99.2
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.2
KOG1023|consensus	484		99.17
KOG1165|consensus	449		99.15
KOG1164|consensus	322		99.1
KOG1290|consensus	590		99.08
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.0
KOG1163|consensus	341		98.95
KOG1240|consensus	1431		98.93
KOG1166|consensus	974		98.85
KOG0590|consensus	601		98.84
KOG0606|consensus	1205		98.61
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.4
PRK10345	210	hypothetical protein; Provisional	98.34
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.33
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.29
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.26
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.23
PRK14879	211	serine/threonine protein kinase; Provisional	98.22
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.14
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.12
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.08
KOG1243|consensus	690		98.04
COG4248	637	Uncharacterized protein with protein kinase and he	98.0
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.97
smart00090	237	RIO RIO-like kinase.	97.89
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.73
KOG0601|consensus	524		97.69
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.64
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.6
KOG2137|consensus	700		97.36
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	96.52
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	96.48
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.35
KOG0576|consensus	829		95.87
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.75
KOG0601|consensus	524		95.37
KOG3087|consensus	229		95.31
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	95.26
KOG1290|consensus	590		94.76
KOG1826|consensus	2724		94.67
PRK09902	216	hypothetical protein; Provisional	93.44
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.44
PRK10271	188	thiK thiamine kinase; Provisional	92.69
COG0478	304	RIO-like serine/threonine protein kinase fused to	92.44
KOG1266|consensus	458		92.41
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	92.0
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.85
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.47
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.33
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	91.25
KOG1235|consensus	538		91.05
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	89.6
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	89.02
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	88.42
PF01636	239	APH: Phosphotransferase enzyme family This family	87.7
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	87.68
PLN02236	344	choline kinase	87.45
PRK05231	319	homoserine kinase; Provisional	86.44
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	85.86
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	85.69
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	84.59
KOG1035|consensus	1351		81.28
COG2334	331	Putative homoserine kinase type II (protein kinase	80.45

>KOG0598|consensus

Probab=100.00  E-value=8.2e-35  Score=213.66  Aligned_cols=167  Identities=22%  Similarity=0.280  Sum_probs=131.1

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      |+||...+|+-++...+. .+ +..++|+++++..++.|...|+.                 ++..|||+.+++|||++ 
T Consensus        76 r~IL~~v~hPFiv~l~ys-FQ-t~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlK-  152 (357)
T KOG0598|consen   76 RNILSKIKHPFIVKLIYS-FQ-TEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLK-  152 (357)
T ss_pred             HHHHHhCCCCcEeeeEEe-cc-cCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCC-
Confidence            578888888666644333 33 67889999999999998775431                 23457777766665555 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                        |+|||++.+|+++|+|||+++..........+ +|||+. |||||++..    .+|+.++|+||+|+++|+|++|.+|
T Consensus       153 --PENILLd~~GHi~LtDFgL~k~~~~~~~~t~t-fcGT~e-YmAPEil~~----~gy~~~vDWWsLGillYeML~G~pP  224 (357)
T KOG0598|consen  153 --PENILLDEQGHIKLTDFGLCKEDLKDGDATRT-FCGTPE-YMAPEILLG----KGYDKAVDWWSLGILLYEMLTGKPP  224 (357)
T ss_pred             --HHHeeecCCCcEEEeccccchhcccCCCcccc-ccCCcc-ccChHHHhc----CCCCcccchHhHHHHHHHHhhCCCC
Confidence              99999999999999999999865544332244 899999 999999999    8999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ .+......+|..+..+ .+|..+|.+++++++.
T Consensus       225 F~~-~~~~~~~~~I~~~k~~-~~p~~ls~~ardll~~  259 (357)
T KOG0598|consen  225 FYA-EDVKKMYDKILKGKLP-LPPGYLSEEARDLLKK  259 (357)
T ss_pred             CcC-ccHHHHHHHHhcCcCC-CCCccCCHHHHHHHHH
Confidence            998 4555677777777634 4466689999998864

>KOG0581|consensus

Probab=100.00  E-value=9.8e-34  Score=208.16  Aligned_cols=167  Identities=27%  Similarity=0.463  Sum_probs=134.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------H------HHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------L------RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------~------~~~~l~~~~~~h~~~~~lk   66 (182)
                      |++.. +++.++..+..++.+...+.+.|||+.++++.+.+..           +      .+.|||..  .|+.|||+|
T Consensus       130 il~~~-~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIK  206 (364)
T KOG0581|consen  130 ILRSC-QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIK  206 (364)
T ss_pred             HHhhC-CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCC
Confidence            56666 4555667777777555468999999999998886532           0      12478752  245556666


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+|+|++..|.|||||||.++.+.++.   ..+++||.. |||||.+.+    ..|+.++||||||.++.|+.+|+.||.
T Consensus       207 PsNlLvNskGeVKicDFGVS~~lvnS~---a~tfvGT~~-YMsPERi~g----~~Ys~~sDIWSLGLsllE~a~GrfP~~  278 (364)
T KOG0581|consen  207 PSNLLVNSKGEVKICDFGVSGILVNSI---ANTFVGTSA-YMSPERISG----ESYSVKSDIWSLGLSLLELAIGRFPYP  278 (364)
T ss_pred             HHHeeeccCCCEEeccccccHHhhhhh---ccccccccc-ccChhhhcC----CcCCcccceecccHHHHHHhhCCCCCC
Confidence            999999999999999999998887763   334999999 999999999    899999999999999999999999997


Q ss_pred             C----CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 T----WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~----~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .    .....+.+..|..+.+|.+|...+|+++++||.+
T Consensus       279 ~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~  317 (364)
T KOG0581|consen  279 PPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSC  317 (364)
T ss_pred             CcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHH
Confidence            6    2356777888889999999665699999999975

>KOG0615|consensus

Probab=100.00  E-value=1.8e-34  Score=214.44  Aligned_cols=170  Identities=16%  Similarity=0.185  Sum_probs=131.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +||+.+.|+|+| .+.++.+ .....|+|+|+.+++++.+++.+-                 +..|||+.+++|||++  
T Consensus       228 eILkkL~HP~IV-~~~d~f~-~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiK--  303 (475)
T KOG0615|consen  228 EILKKLSHPNIV-RIKDFFE-VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIK--  303 (475)
T ss_pred             HHHHhcCCCCEE-EEeeeee-cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCC--
Confidence            488999998886 5566666 344569999999999998864211                 1248888887777766  


Q ss_pred             CCCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                       |+|||++.+   ..+||+|||+|+..+....  +.+.|||+. |.|||++...+. ..+..++|+||+||++|.+++|.
T Consensus       304 -PeNILl~~~~e~~llKItDFGlAK~~g~~sf--m~TlCGTps-YvAPEVl~~kg~-~~~~~kVDiWSlGcvLfvcLsG~  378 (475)
T KOG0615|consen  304 -PENILLSNDAEDCLLKITDFGLAKVSGEGSF--MKTLCGTPS-YVAPEVLASKGV-EYYPSKVDIWSLGCVLFVCLSGY  378 (475)
T ss_pred             -cceEEeccCCcceEEEecccchhhcccccee--hhhhcCCcc-ccChhheecCCe-ecccchheeeeccceEEEEeccC
Confidence             999999876   6789999999998764433  445999999 999999997443 23446889999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      +||++...+.....+|.+|....-|  ...+|.++++||+.
T Consensus       379 pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~  419 (475)
T KOG0615|consen  379 PPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINW  419 (475)
T ss_pred             CCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHH
Confidence            9999855555567778887655443  34799999999863

>KOG0616|consensus

Probab=100.00  E-value=3.5e-33  Score=200.12  Aligned_cols=163  Identities=15%  Similarity=0.259  Sum_probs=130.5

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H---HHHHHhhcchhcccccC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L---RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~---~~~~l~~~~~~h~~~~~   64 (182)
                      ++||+...++.++ .+ .....+...++++|++..++.+...+..              .   +..|||+.+   +..||
T Consensus        95 k~vL~~v~~PFlv-~l-~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~---iiYRD  169 (355)
T KOG0616|consen   95 KRVLKAVSHPFLV-KL-YGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRD  169 (355)
T ss_pred             HHHHhhccCceeE-EE-EEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC---eeecc
Confidence            5677777765544 32 2234477889999999999998876532              2   234666555   45555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+|||+|.+|.+||+|||+|+..... +  .+ .|||+- |+|||.++.    .+++.++|+|+||+++|||+.|.+|
T Consensus       170 LKPENiLlD~~G~iKitDFGFAK~v~~r-T--~T-lCGTPe-YLAPEii~s----k~ynkavDWWalGVLIYEMlaG~pP  240 (355)
T KOG0616|consen  170 LKPENLLLDQNGHIKITDFGFAKRVSGR-T--WT-LCGTPE-YLAPEIIQS----KGYNKAVDWWALGVLIYEMLAGYPP  240 (355)
T ss_pred             CChHHeeeccCCcEEEEeccceEEecCc-E--EE-ecCCcc-ccChHHhhc----CCCCcchhHHHHHHHHHHHHcCCCC
Confidence            6699999999999999999999887665 2  34 899999 999999999    8999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ .++.....+|..+. ..+ |+.+|++++++++.
T Consensus       241 F~~-~~~~~iY~KI~~~~-v~f-P~~fs~~~kdLl~~  274 (355)
T KOG0616|consen  241 FYD-DNPIQIYEKILEGK-VKF-PSYFSSDAKDLLKK  274 (355)
T ss_pred             CcC-CChHHHHHHHHhCc-ccC-CcccCHHHHHHHHH
Confidence            998 57788889998886 567 56799999999863

>KOG0595|consensus

Probab=100.00  E-value=7.5e-33  Score=205.60  Aligned_cols=164  Identities=18%  Similarity=0.297  Sum_probs=124.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .||+.++|+|+| .+.++.. ++..+++|||||.++++-+++..                 .+.++||+.+++|+|   |
T Consensus        61 ~iLkel~H~nIV-~l~d~~~-~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRD---L  135 (429)
T KOG0595|consen   61 KILKELKHPNIV-RLLDCIE-DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRD---L  135 (429)
T ss_pred             HHHHhcCCccee-eEEEEEe-cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc---C
Confidence            378888987665 6666666 45589999999999999887532                 123567666655555   5


Q ss_pred             CCCcEEEcCC------CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQ------FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        66 k~~nil~~~~------~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      ||.|||++..      -.+||+|||+|+.+.....  ..+.||++. |||||++..    ..|+.++|+||+|+++|+++
T Consensus       136 KPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~--a~tlcGSpl-YMAPEV~~~----~~YdAKADLWSiG~Ilyq~l  208 (429)
T KOG0595|consen  136 KPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM--AETLCGSPL-YMAPEVIMS----QQYDAKADLWSIGTILYQCL  208 (429)
T ss_pred             CcceEEeccCCCCCCCceEEecccchhhhCCchhH--HHHhhCCcc-ccCHHHHHh----ccccchhhHHHHHHHHHHHH
Confidence            5999999865      4589999999999876554  445899999 999999987    79999999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhC-CCCCCCCCCCCHHHHHHh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQD-DPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~~~~i  179 (182)
                      +|++||.. ....+....+..+ ...+.++...|+...+++
T Consensus       209 ~g~~Pf~a-~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll  248 (429)
T KOG0595|consen  209 TGKPPFDA-ETPKELLLYIKKGNEIVPVLPAELSNPLRELL  248 (429)
T ss_pred             hCCCCccc-cCHHHHHHHHhccccccCchhhhccCchhhhh
Confidence            99999998 4665666555443 223343566666655543

>KOG0575|consensus

Probab=100.00  E-value=1e-32  Score=213.45  Aligned_cols=163  Identities=20%  Similarity=0.305  Sum_probs=133.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      +|++.++|+|+| .+...++ +..++|++.|.+..+++-..+                   .++.  |||+++++|||++
T Consensus        70 eIHr~L~HpnIV-~f~~~FE-Ds~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~Glk--YLH~~~IiHRDLK  145 (592)
T KOG0575|consen   70 EIHRSLKHPNIV-QFYHFFE-DSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLK--YLHSLGIIHRDLK  145 (592)
T ss_pred             HHHHhcCCCcEE-eeeeEee-cCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHH--HHHhcCceecccc
Confidence            488899998886 4455555 778899999999998876643                   3444  9999987777666


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                         -.|++++.+.+|||+|||+|..+..+.....+ .|||+. |.|||++..    ..++..+||||+||++|.|+.|+|
T Consensus       146 ---LGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T-lCGTPN-YIAPEVl~k----~gHsfEvDiWSlGcvmYtLL~G~P  216 (592)
T KOG0575|consen  146 ---LGNLFLNENMNVKIGDFGLATQLEYDGERKKT-LCGTPN-YIAPEVLNK----SGHSFEVDIWSLGCVMYTLLVGRP  216 (592)
T ss_pred             ---hhheeecCcCcEEecccceeeeecCcccccce-ecCCCc-ccChhHhcc----CCCCCchhhhhhhhHHHhhhhCCC
Confidence               99999999999999999999888755443344 999999 999999998    789999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||+. ..-.+++.+|..+. ..+ |..+|.+|+++|+.
T Consensus       217 PFet-k~vkety~~Ik~~~-Y~~-P~~ls~~A~dLI~~  251 (592)
T KOG0575|consen  217 PFET-KTVKETYNKIKLNE-YSM-PSHLSAEAKDLIRK  251 (592)
T ss_pred             Cccc-chHHHHHHHHHhcC-ccc-ccccCHHHHHHHHH
Confidence            9998 45667777776654 556 56799999999874

>KOG0591|consensus

Probab=100.00  E-value=4.6e-34  Score=203.67  Aligned_cols=172  Identities=20%  Similarity=0.269  Sum_probs=134.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcch-hcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYHL-CVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~~-~h~   60 (182)
                      +||+.++|+|+|....--...+.+.++++||++..+++.+++..-                     ++..+|+.-- .-+
T Consensus        70 ~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~V  149 (375)
T KOG0591|consen   70 SLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTV  149 (375)
T ss_pred             HHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccce
Confidence            589999999998544312222445578999999999998865321                     1123443100 114


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      .|||+||.||+++++|.+||.|||+++.+.....-..+ .+|||. ||+||.+..    .+|+.++||||+||++|||..
T Consensus       150 mHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S-~VGTPy-YMSPE~i~~----~~Y~~kSDiWslGCllyEMca  223 (375)
T KOG0591|consen  150 MHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHS-LVGTPY-YMSPERIHE----SGYNFKSDIWSLGCLLYEMCA  223 (375)
T ss_pred             eeccCcchheEEcCCCceeeccchhHhHhcchhHHHHh-hcCCCc-ccCHHHHhc----CCCCcchhHHHHHHHHHHHHh
Confidence            68899999999999999999999999887665543344 899999 999999999    899999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      -++||.| ++-.+.-.+|.+|..|++|....|.++..+|+.
T Consensus       224 L~~PF~g-~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~  263 (375)
T KOG0591|consen  224 LQSPFYG-DNLLSLCKKIEQGDYPPLPDEHYSTDLRELINM  263 (375)
T ss_pred             cCCCccc-ccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHH
Confidence            9999999 466676777888988889667889999888763

>KOG0592|consensus

Probab=99.98  E-value=1.2e-31  Score=205.15  Aligned_cols=168  Identities=14%  Similarity=0.198  Sum_probs=132.6

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H---HHHHHhhcchhcccccC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L---RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~---~~~~l~~~~~~h~~~~~   64 (182)
                      |.+|..+.+++.++.++.-++ |+..+|.+.+|..++++.+.+..              .   +++|+|+.+++|||++ 
T Consensus       124 k~~l~~L~~hPgivkLy~TFQ-D~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlK-  201 (604)
T KOG0592|consen  124 KEALTQLSGHPGIVKLYFTFQ-DEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLK-  201 (604)
T ss_pred             HHHHHHhhCCCCeEEEEEEee-cccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCC-
Confidence            457888877778778776666 78889999999999999886422              1   2357777766666555 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh------------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII------------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~------------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                        |+|||++.+++++|+|||.|+.+......            ....++||.. |.+||++..    ...+.++|+|+||
T Consensus       202 --PENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAe-YVSPElL~~----~~~~~~sDiWAlG  274 (604)
T KOG0592|consen  202 --PENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAE-YVSPELLND----SPAGPSSDLWALG  274 (604)
T ss_pred             --hhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeec-ccCHHHhcC----CCCCcccchHHHH
Confidence              99999999999999999999886543221            1133789999 999999998    7788999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        133 ISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       133 ~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |++|.|+.|++||.+ .++..+.++|+.-. ..| |..+++.++|||++
T Consensus       275 CilyQmlaG~PPFra-~NeyliFqkI~~l~-y~f-p~~fp~~a~dLv~K  320 (604)
T KOG0592|consen  275 CILYQMLAGQPPFRA-ANEYLIFQKIQALD-YEF-PEGFPEDARDLIKK  320 (604)
T ss_pred             HHHHHHhcCCCCCcc-ccHHHHHHHHHHhc-ccC-CCCCCHHHHHHHHH
Confidence            999999999999998 56666677766544 567 55689999999874

>KOG0588|consensus

Probab=99.98  E-value=5.3e-32  Score=211.31  Aligned_cols=163  Identities=19%  Similarity=0.295  Sum_probs=133.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      |++++.|+|++ .++++.+ +..++|++.||..++.+++++..                 ..+.|+|+.|+||+|++   
T Consensus        65 iMkLi~HpnVl-~LydVwe-~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLK---  139 (786)
T KOG0588|consen   65 IMKLIEHPNVL-RLYDVWE-NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLK---  139 (786)
T ss_pred             HHHHhcCCCee-eeeeeec-cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCC---
Confidence            67888897775 5666666 67889999999999998885411                 12358888888877766   


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+|+|++..+.+||+|||+|.....+..  ..+.||++. |+|||++.+    .+|+ .++||||+|+++|.|++|..||
T Consensus       140 pENlLLd~~~nIKIADFGMAsLe~~gkl--LeTSCGSPH-YA~PEIV~G----~pYdG~~sDVWSCGVILfALLtG~LPF  212 (786)
T KOG0588|consen  140 PENLLLDVKNNIKIADFGMASLEVPGKL--LETSCGSPH-YAAPEIVSG----RPYDGRPSDVWSCGVILFALLTGKLPF  212 (786)
T ss_pred             chhhhhhcccCEeeeccceeecccCCcc--ccccCCCcc-cCCchhhcC----CCCCCCccccchhHHHHHHHHhCCCCC
Confidence            9999999999999999999987665544  344999999 999999999    7887 8999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .+-...+.++.+|. ... |..+|+++++|+++
T Consensus       213 dD-dNir~LLlKV~~G~-f~M-Ps~Is~eaQdLLr~  245 (786)
T KOG0588|consen  213 DD-DNIRVLLLKVQRGV-FEM-PSNISSEAQDLLRR  245 (786)
T ss_pred             CC-ccHHHHHHHHHcCc-ccC-CCcCCHHHHHHHHH
Confidence            97 46656777776765 556 57899999999874

>KOG0605|consensus

Probab=99.97  E-value=1e-30  Score=199.88  Aligned_cols=169  Identities=22%  Similarity=0.266  Sum_probs=126.2

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH---------------H--HHHHHHHhhcchhcccccC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL---------------E--TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---------------~--~~~~~~l~~~~~~h~~~~~   64 (182)
                      |+||.. ..++.++.++.-++ +..++|++|||..++++...|               .  .++...+|.++++|+|   
T Consensus       192 RdiL~~-~ds~~vVKLyYsFQ-D~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRD---  266 (550)
T KOG0605|consen  192 RDILAE-VDSPWVVKLYYSFQ-DKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRD---  266 (550)
T ss_pred             HHHhhh-cCCCcEEEEEEEec-CCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCccccc---
Confidence            456666 56677777766666 788899999999999976643               1  1222356666655555   


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCch-----------------------hh----hh-------------------cc
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDL-----------------------LI----IR-------------------GL   98 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~-----------------------~~----~~-------------------~~   98 (182)
                      |||+|+|++..|++||+|||++..+...                       ..    ..                   ..
T Consensus       267 IKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~  346 (550)
T KOG0605|consen  267 IKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAY  346 (550)
T ss_pred             CChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhh
Confidence            5599999999999999999998542210                       00    00                   00


Q ss_pred             cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCC-CCCCCHHHH
Q psy17162         99 YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLP-PGEFSSDFK  176 (182)
Q Consensus        99 ~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~-~~~~s~~~~  176 (182)
                      -.+|||- |+|||++.+    .+|+..+|+|||||++|||+.|.+||.+ ..+.++..+|+.. ..-.+| ...+|++++
T Consensus       347 StVGTPD-YiAPEVll~----kgY~~~cDwWSLG~ImyEmLvGyPPF~s-~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~  420 (550)
T KOG0605|consen  347 STVGTPD-YIAPEVLLG----KGYGKECDWWSLGCIMYEMLVGYPPFCS-ETPQETYRKIVNWRETLKFPEEVDLSDEAK  420 (550)
T ss_pred             cccCCcc-ccchHHHhc----CCCCccccHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHHhhhccCCCcCcccHHHH
Confidence            1479999 999999999    7899999999999999999999999999 6888888888763 223344 347889999


Q ss_pred             HHhhh
Q psy17162        177 DFITL  181 (182)
Q Consensus       177 ~~i~~  181 (182)
                      |||.+
T Consensus       421 DLI~r  425 (550)
T KOG0605|consen  421 DLITR  425 (550)
T ss_pred             HHHHH
Confidence            99965

>KOG0694|consensus

Probab=99.97  E-value=2.8e-31  Score=207.85  Aligned_cols=166  Identities=17%  Similarity=0.233  Sum_probs=134.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------HH---HHHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------LE---TLRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------l~---~~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .|+++.+.++++..+.+..+ +...++.+|||..++++.++             ..   .++++|||++++++||++   
T Consensus       420 rI~~la~~HPFL~~L~~~fQ-T~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlK---  495 (694)
T KOG0694|consen  420 RIFELANRHPFLVNLFSCFQ-TKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLK---  495 (694)
T ss_pred             HHHHHhccCCeEeecccccc-cCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecc---
Confidence            47888888899988888777 67789999999999985431             11   234568888887777666   


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      -+|||+|.+|++||+|||+++..........+ +|||+- |+|||++.+    ..|+.++|+|||||++|||+.|++||+
T Consensus       496 LdNiLLD~eGh~kiADFGlcKe~m~~g~~TsT-fCGTpe-y~aPEil~e----~~Yt~aVDWW~lGVLlyeML~Gq~PF~  569 (694)
T KOG0694|consen  496 LDNLLLDTEGHVKIADFGLCKEGMGQGDRTST-FCGTPE-FLAPEVLTE----QSYTRAVDWWGLGVLLYEMLVGESPFP  569 (694)
T ss_pred             hhheEEcccCcEEecccccccccCCCCCcccc-ccCChh-hcChhhhcc----CcccchhhHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999886633333344 999999 999999999    899999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      | ++..+....|+... +.. |.++|.++.+++++
T Consensus       570 g-ddEee~FdsI~~d~-~~y-P~~ls~ea~~il~~  601 (694)
T KOG0694|consen  570 G-DDEEEVFDSIVNDE-VRY-PRFLSKEAIAIMRR  601 (694)
T ss_pred             C-CCHHHHHHHHhcCC-CCC-CCcccHHHHHHHHH
Confidence            9 45545555555544 556 67899999998864

>KOG0578|consensus

Probab=99.97  E-value=6.6e-32  Score=207.40  Aligned_cols=164  Identities=20%  Similarity=0.322  Sum_probs=133.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH------------------HHHHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL------------------ETLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------------------~~~~~~~l~~~~~~h~~~~~l   65 (182)
                      |++-+.|+|+|..+..+-..  .++..+|||.+++++.+.+                  .++  +|||+.+++|+|   +
T Consensus       323 Vm~~~~H~NiVnfl~Sylv~--deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL--~fLH~~gIiHrD---I  395 (550)
T KOG0578|consen  323 VMRDLHHPNIVNFLDSYLVG--DELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGL--KFLHARGIIHRD---I  395 (550)
T ss_pred             HHHhccchHHHHHHHHhccc--ceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHH--HHHHhcceeeec---c
Confidence            66778899988666554443  5577889998888877742                  222  366666655555   5


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |.+|||+..+|.+||+|||++..+...... +.+.+|+++ |||||++..    ..|+.++||||||++++||..|++||
T Consensus       396 KSDnILL~~~g~vKltDFGFcaqi~~~~~K-R~TmVGTPY-WMAPEVvtr----k~YG~KVDIWSLGIMaIEMveGEPPY  469 (550)
T KOG0578|consen  396 KSDNILLTMDGSVKLTDFGFCAQISEEQSK-RSTMVGTPY-WMAPEVVTR----KPYGPKVDIWSLGIMAIEMVEGEPPY  469 (550)
T ss_pred             ccceeEeccCCcEEEeeeeeeeccccccCc-cccccCCCC-ccchhhhhh----cccCccccchhhhhHHHHHhcCCCCc
Confidence            599999999999999999999887665543 344899999 999999988    89999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      .. .++...+..|..+..|.+. ++.+|++++||+++
T Consensus       470 ln-E~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~  505 (550)
T KOG0578|consen  470 LN-ENPLRALYLIATNGTPKLKNPEKLSPELKDFLDR  505 (550)
T ss_pred             cC-CChHHHHHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence            98 6888888888887778887 66899999999874

>KOG0583|consensus

Probab=99.97  E-value=6.5e-30  Score=195.35  Aligned_cols=164  Identities=18%  Similarity=0.233  Sum_probs=124.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.++++++.+.++...... ++++|||+.++++.+.+..                 .+.+|+|+.+++|+   |||
T Consensus        72 ~~~~~~~HpnI~~l~ev~~t~~~-~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HR---DLK  147 (370)
T KOG0583|consen   72 ILRRLRSHPNIIRLLEVFATPTK-IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHR---DLK  147 (370)
T ss_pred             HHHHhccCCCEeEEEEEEecCCe-EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeC---CCC
Confidence            67888844455677777774444 9999999999998886532                 11246666655555   555


Q ss_pred             CCcEEEcCC-CeEEEeccCCCCCCC-chhhhhcccCCCCCCcccCccccCCCCCCCC-CC-ccchHHHHHHHHHHHHhCC
Q psy17162         67 VDTFHQRLQ-FLLHLFRFALSGNQD-DLLIIRGLYGADCDPNFIRPERIDPSGNPSN-YD-IRSDVWSLGISLIELATGR  142 (182)
Q Consensus        67 ~~nil~~~~-~~~kl~dfg~a~~~~-~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~-~~-~~~Diwslg~~l~~l~~g~  142 (182)
                      |+|++++.+ +.+||+|||++.... ....  ..+.||++. |+|||++..    .. |+ .++|+||+|+++|.|++|.
T Consensus       148 ~ENilld~~~~~~Kl~DFG~s~~~~~~~~~--l~t~cGsp~-Y~aPEvl~~----~~~Y~g~~aDvWS~GViLy~ml~G~  220 (370)
T KOG0583|consen  148 PENILLDGNEGNLKLSDFGLSAISPGEDGL--LKTFCGSPA-YAAPEVLSG----KGTYSGKAADVWSLGVILYVLLCGR  220 (370)
T ss_pred             HHHEEecCCCCCEEEeccccccccCCCCCc--ccCCCCCcc-cCCHHHhCC----CCCcCCchhhhhhhHHHHHHHHhCC
Confidence            999999999 999999999998763 2222  344899999 999999998    55 76 8899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCC-CHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEF-SSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~~~~i~~  181 (182)
                      .||.. ........+|..+. ..+ |..+ |+++++++++
T Consensus       221 ~PF~d-~~~~~l~~ki~~~~-~~~-p~~~~S~~~~~Li~~  257 (370)
T KOG0583|consen  221 LPFDD-SNVPNLYRKIRKGE-FKI-PSYLLSPEARSLIEK  257 (370)
T ss_pred             CCCCC-ccHHHHHHHHhcCC-ccC-CCCcCCHHHHHHHHH
Confidence            99998 45545555555554 567 5567 9999999864

>KOG0192|consensus

Probab=99.97  E-value=2.9e-29  Score=190.53  Aligned_cols=171  Identities=22%  Similarity=0.271  Sum_probs=127.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|+|. +..+...+...+.++|||..++++.+.+...                   ...|||+.+.  +.|+
T Consensus        91 ~il~~l~HpNIV~-f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHr  167 (362)
T KOG0192|consen   91 SLLSRLRHPNIVQ-FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHR  167 (362)
T ss_pred             HHHHhCCCCCeee-EEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeec
Confidence            3778899999886 4444443444688999999999998876331                   2358888873  5556


Q ss_pred             CCCCCcEEEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         64 YFSVDTFHQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||||+|+|++.++ ++||+|||+++....... ..+...||.. |||||++...  ...|+.++|+||||+++|||+||.
T Consensus       168 DLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~-~~~~~~GT~~-wMAPEv~~~~--~~~~~~K~DvySFgIvlWEl~t~~  243 (362)
T KOG0192|consen  168 DLKSDNILVDLKGKTLKIADFGLSREKVISKT-SMTSVAGTYR-WMAPEVLRGE--KSPYTEKSDVYSFGIVLWELLTGE  243 (362)
T ss_pred             ccChhhEEEcCCCCEEEECCCccceeeccccc-cccCCCCCcc-ccChhhhcCC--CCcCCccchhhhHHHHHHHHHHCC
Confidence            6669999999997 999999999987665321 1333578878 9999999941  168999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHh-hCCCCCCCCCCCCHHHHHHh-hhC
Q psy17162        143 FPYDTWGSPFEQLKQVV-QDDPPRLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~~i-~~~  182 (182)
                      .||.+. .+.+....+. .+.+|.+ |..+++.+..++ +||
T Consensus       244 ~Pf~~~-~~~~~~~~v~~~~~Rp~~-p~~~~~~l~~l~~~CW  283 (362)
T KOG0192|consen  244 IPFEDL-APVQVASAVVVGGLRPPI-PKECPPHLSSLMERCW  283 (362)
T ss_pred             CCCCCC-CHHHHHHHHHhcCCCCCC-CccCCHHHHHHHHHhC
Confidence            999995 4455555554 6777777 444777777655 455

>KOG0197|consensus

Probab=99.96  E-value=2.3e-29  Score=192.37  Aligned_cols=168  Identities=20%  Similarity=0.298  Sum_probs=134.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +|++.+.|.++| .+..+.+.+ +.++++||+...++|.++|..                   ...+||++.+++|||+.
T Consensus       253 ~iMk~L~H~~lV-~l~gV~~~~-~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLA  330 (468)
T KOG0197|consen  253 QIMKKLRHEKLV-KLYGVCTKQ-EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLA  330 (468)
T ss_pred             HHHHhCcccCeE-EEEEEEecC-CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhh
Confidence            478889997776 555555533 389999999999999998643                   12368999988888877


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                         ..|||++.+..+||+|||+|+...++...... ....|.+|+|||++..    +.++.++|+||||+++||++| |+
T Consensus       331 ---ARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~-~~kfPIkWtAPEa~~~----~~FS~kSDVWSFGVlL~E~fT~G~  402 (468)
T KOG0197|consen  331 ---ARNILVDEDLVVKISDFGLARLIGDDEYTASE-GGKFPIKWTAPEALNY----GKFSSKSDVWSFGVLLWELFTYGR  402 (468)
T ss_pred             ---hhheeeccCceEEEcccccccccCCCceeecC-CCCCCceecCHHHHhh----CCcccccceeehhhhHHHHhccCC
Confidence               99999999999999999999966655442222 2334557999999998    899999999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh-hhC
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i-~~~  182 (182)
                      .|+.++ ...+.+..+.+|.+.+- |..+|+++.+++ .||
T Consensus       403 ~py~~m-sn~ev~~~le~GyRlp~-P~~CP~~vY~lM~~CW  441 (468)
T KOG0197|consen  403 VPYPGM-SNEEVLELLERGYRLPR-PEGCPDEVYELMKSCW  441 (468)
T ss_pred             CCCCCC-CHHHHHHHHhccCcCCC-CCCCCHHHHHHHHHHh
Confidence            999994 66688888889987766 667899988865 455

>KOG0983|consensus

Probab=99.96  E-value=8.8e-29  Score=176.35  Aligned_cols=126  Identities=37%  Similarity=0.625  Sum_probs=106.9

Q ss_pred             HHhhcchhc-ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCV-RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h-~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .|++++--| +.|||+||+|||++..|.+|+||||.+..+.++..  .+...|++. |||||.+..... ..|+.++|+|
T Consensus       203 AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--htrsAGC~~-YMaPERidp~~~-~kYDiRaDVW  278 (391)
T KOG0983|consen  203 ALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--HTRSAGCAA-YMAPERIDPPDK-PKYDIRADVW  278 (391)
T ss_pred             HHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc--cccccCCcc-ccCccccCCCCC-Cccchhhhhh
Confidence            344444334 46788889999999999999999999988877765  566789999 999999986332 5788999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCC-CCCHHHHHHhh
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG-EFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~-~~s~~~~~~i~  180 (182)
                      |||++++|+.||+.||.+.+.+++.+.+++...+|.+|+. .+|+.+++|+.
T Consensus       279 SlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~  330 (391)
T KOG0983|consen  279 SLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVK  330 (391)
T ss_pred             hhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHH
Confidence            9999999999999999997789999999999998999866 59999999885

>KOG0585|consensus

Probab=99.96  E-value=2.4e-28  Score=184.82  Aligned_cols=171  Identities=19%  Similarity=0.289  Sum_probs=128.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH---------------HHHHH--HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK---------------ELETL--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------~l~~~--~~~~l~~~~~~h~~~~~l   65 (182)
                      .|++.+.|+|+|..+..+......++|+|.||+..+.+..               ++..+  .+.|||+++++|+|++  
T Consensus       160 ailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIK--  237 (576)
T KOG0585|consen  160 AILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIK--  237 (576)
T ss_pred             HHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccc--
Confidence            4889999999998888899988999999999987766533               12211  2348888887777665  


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCc-----hhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDD-----LLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELA  139 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~-----~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~  139 (182)
                       |.|+|++.+|++||+|||.+.....     ....... .+||+. |+|||.+..... ..++ .+.||||+|+++|.++
T Consensus       238 -PsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~-tvGTPA-F~APE~c~~~~~-~~~~g~a~DiWalGVTLYCll  313 (576)
T KOG0585|consen  238 -PSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSR-TVGTPA-FFAPELCSGGNS-FSYSGFALDIWALGVTLYCLL  313 (576)
T ss_pred             -hhheEEcCCCcEEeeccceeeecccCCccccHHHHhh-cCCCcc-ccchHhhcCCCC-ccccchhhhhhhhhhhHHHhh
Confidence             9999999999999999999875521     1122222 689999 999999986221 2233 7889999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCCCCC-CCCHHHHHHhhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~-~~s~~~~~~i~~  181 (182)
                      .|+.||.+ +...+...+|... +..+|.. .+..+++|+|.+
T Consensus       314 fG~~PF~~-~~~~~l~~KIvn~-pL~fP~~pe~~e~~kDli~~  354 (576)
T KOG0585|consen  314 FGQLPFFD-DFELELFDKIVND-PLEFPENPEINEDLKDLIKR  354 (576)
T ss_pred             hccCCccc-chHHHHHHHHhcC-cccCCCcccccHHHHHHHHH
Confidence            99999998 4555666666555 3556533 478899998864

>KOG0610|consensus

Probab=99.96  E-value=5.9e-28  Score=179.96  Aligned_cols=171  Identities=21%  Similarity=0.208  Sum_probs=128.4

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH----------------HHHHHHHHHhhcchhcccccCC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE----------------LETLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------l~~~~~~~l~~~~~~h~~~~~l   65 (182)
                      |+||..+.| +++.+++...+ +++.++++||||.++++...                ..+....+|.++|..+++.|||
T Consensus       128 ~eIL~~lDH-PFlPTLYa~fe-t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDL  205 (459)
T KOG0610|consen  128 REILSLLDH-PFLPTLYASFE-TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDL  205 (459)
T ss_pred             HHHHHhcCC-Cccchhhheee-ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccC
Confidence            457777777 67778777777 77888999999999997652                2233333444555555666667


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCc---------------------------------hhh------------------
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDD---------------------------------LLI------------------   94 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~---------------------------------~~~------------------   94 (182)
                      ||+|||+..+|++.|+||-++.....                                 ...                  
T Consensus       206 KPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~a  285 (459)
T KOG0610|consen  206 KPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVA  285 (459)
T ss_pred             CcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhc
Confidence            79999999999999999987643210                                 000                  


Q ss_pred             ----hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCC-
Q psy17162         95 ----IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG-  169 (182)
Q Consensus        95 ----~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~-  169 (182)
                          .+..-++||-- |.|||++.+    .+++.++|+|+||+++|||+.|..||.| ....+++.+|+... +.+|.. 
T Consensus       286 ep~~~RSnSFVGThE-YlAPEvI~G----~GHgsAVDWWtfGIflYEmLyG~TPFKG-~~~~~Tl~NIv~~~-l~Fp~~~  358 (459)
T KOG0610|consen  286 EPTGARSNSFVGTHE-YLAPEVIRG----EGHGSAVDWWTFGIFLYEMLYGTTPFKG-SNNKETLRNIVGQP-LKFPEEP  358 (459)
T ss_pred             CCCCccccccccccc-cccceeeec----CCCCchhhHHHHHHHHHHHHhCCCCcCC-CCchhhHHHHhcCC-CcCCCCC
Confidence                00111567777 999999999    8899999999999999999999999999 45668888877664 667633 


Q ss_pred             CCCHHHHHHhhh
Q psy17162        170 EFSSDFKDFITL  181 (182)
Q Consensus       170 ~~s~~~~~~i~~  181 (182)
                      .+|..++|+|++
T Consensus       359 ~vs~~akDLIr~  370 (459)
T KOG0610|consen  359 EVSSAAKDLIRK  370 (459)
T ss_pred             cchhHHHHHHHH
Confidence            688999999974

>KOG0198|consensus

Probab=99.96  E-value=7.1e-29  Score=183.87  Aligned_cols=171  Identities=19%  Similarity=0.272  Sum_probs=121.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~   64 (182)
                      .||+.|+|+|+|.........+...++++|||..++++.+.+...                  ...|||+.+++|+|++ 
T Consensus        66 ~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK-  144 (313)
T KOG0198|consen   66 RILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIK-  144 (313)
T ss_pred             HHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcc-
Confidence            478889987777554432332224677999999988887754321                  1248887776666655 


Q ss_pred             CCCCcEEEcC-CCeEEEeccCCCCCCCc--hhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRL-QFLLHLFRFALSGNQDD--LLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~-~~~~kl~dfg~a~~~~~--~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        |+|||++. ++.+||+|||.++....  ..........|++. |||||++.. .  ...+.++||||+||++.||+||
T Consensus       145 --~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~-~maPEvi~~-g--~~~~~~sDiWSlGCtVvEM~Tg  218 (313)
T KOG0198|consen  145 --PANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPN-YMAPEVIRN-G--EVARRESDIWSLGCTVVEMLTG  218 (313)
T ss_pred             --cceEEEeCCCCeEEeccCccccccccccccccccccccCCcc-ccCchhhcC-C--CcCCccchhhhcCCEEEeccCC
Confidence              99999999 69999999999876552  11001122678888 999999984 0  2333699999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+||.......+.+..+.. +..|.+ |..+|+++++|+.+
T Consensus       219 ~~PW~~~~~~~~~~~~ig~~~~~P~i-p~~ls~~a~~Fl~~  258 (313)
T KOG0198|consen  219 KPPWSEFFEEAEALLLIGREDSLPEI-PDSLSDEAKDFLRK  258 (313)
T ss_pred             CCcchhhcchHHHHHHHhccCCCCCC-CcccCHHHHHHHHH
Confidence            9999873244455555544 445666 56699999999864

>KOG4717|consensus

Probab=99.96  E-value=3e-28  Score=186.55  Aligned_cols=161  Identities=20%  Similarity=0.236  Sum_probs=125.4

Q ss_pred             CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH--------HHH----HHHHhh---cchhcccccCCCCCcEEEc-
Q psy17162         10 QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE--------TLR----CIYIQD---YHLCVRSTRYFSVDTFHQR-   73 (182)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------~~~----~~~l~~---~~~~h~~~~~lk~~nil~~-   73 (182)
                      ++++++.++++.. +..++|++.|.+..+++.+++-        .+.    ++.+|+   .|..|.+||||||+|+++- 
T Consensus        75 QHpNiVRLYEViD-TQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE  153 (864)
T KOG4717|consen   75 QHPNIVRLYEVID-TQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE  153 (864)
T ss_pred             cCcCeeeeeehhc-ccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee
Confidence            4445557777766 6778999999999999998651        111    122332   3444567777889999664 


Q ss_pred             CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCCcH
Q psy17162         74 LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDTWGSPF  152 (182)
Q Consensus        74 ~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g~~pf~~~~~~~  152 (182)
                      .-|-|||.|||++-.+..+..  .++.||+.. |.|||.+.+    ..|+ +++||||||+++|.+.+|++||+. -++-
T Consensus       154 KlGlVKLTDFGFSNkf~PG~k--L~TsCGSLA-YSAPEILLG----DsYDAPAVDiWSLGVILyMLVCGq~PFqe-ANDS  225 (864)
T KOG4717|consen  154 KLGLVKLTDFGFSNKFQPGKK--LTTSCGSLA-YSAPEILLG----DSYDAPAVDIWSLGVILYMLVCGQPPFQE-ANDS  225 (864)
T ss_pred             ecCceEeeeccccccCCCcch--hhcccchhh-ccCchhhhc----CccCCcchhhhHHHHHHHHHHhCCCcccc-ccch
Confidence            458999999999988766655  556899998 999999999    6788 889999999999999999999998 4666


Q ss_pred             HHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        153 EQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       153 ~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +.+.+|+... ..+ |..+|++++|+|+.
T Consensus       226 ETLTmImDCK-Ytv-PshvS~eCrdLI~s  252 (864)
T KOG4717|consen  226 ETLTMIMDCK-YTV-PSHVSKECRDLIQS  252 (864)
T ss_pred             hhhhhhhccc-ccC-chhhhHHHHHHHHH
Confidence            8899988764 556 67799999999863

>KOG0597|consensus

Probab=99.96  E-value=8.9e-29  Score=190.84  Aligned_cols=163  Identities=21%  Similarity=0.262  Sum_probs=121.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .|++.++|+|++-.+ +.++ +...+..|.||+.+ ++.+.+..                 .+..|||+.++.   |+|+
T Consensus        53 ~i~r~lkHpniv~m~-esfE-t~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~ril---hrd~  126 (808)
T KOG0597|consen   53 RILRSLKHPNIVEML-ESFE-TSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRIL---HRDM  126 (808)
T ss_pred             HHHHhcCCcchhhHH-Hhhc-ccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcc---cccC
Confidence            378899999987333 2223 56678889999887 77665421                 112356665555   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||.||+++..+.+|+||||+|+..+.+.. ..+...|++. |||||++.+    .+|+..+|+||+||++||++.|++||
T Consensus       127 kPqniLl~~~~~~KlcdFg~Ar~m~~~t~-vltsikGtPl-YmAPElv~e----~pyd~~sDlWslGcilYE~~~G~PPF  200 (808)
T KOG0597|consen  127 KPQNILLEKGGTLKLCDFGLARAMSTNTS-VLTSIKGTPL-YMAPELVEE----QPYDHTSDLWSLGCILYELYVGQPPF  200 (808)
T ss_pred             CcceeeecCCCceeechhhhhhhcccCce-eeeeccCccc-ccCHHHHcC----CCccchhhHHHHHHHHHHHhcCCCCc
Confidence            69999999999999999999988765433 2333679999 999999998    89999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .. ..-.+.+.+|...+ ++. |...|+.+.+|++
T Consensus       201 ~a-~si~~Lv~~I~~d~-v~~-p~~~S~~f~nfl~  232 (808)
T KOG0597|consen  201 YA-RSITQLVKSILKDP-VKP-PSTASSSFVNFLQ  232 (808)
T ss_pred             hH-HHHHHHHHHHhcCC-CCC-cccccHHHHHHHH
Confidence            87 44445555555554 434 4578888888775

>KOG0600|consensus

Probab=99.95  E-value=4.3e-28  Score=184.48  Aligned_cols=147  Identities=18%  Similarity=0.154  Sum_probs=113.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccch---------------H----HHHHHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEK---------------V----QKELETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l----~~~l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      ||+.++|+|++..-.-+.......+|+|+||+...-               +    .|.+.++.  |+|..++.|+|   
T Consensus       169 ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~--~cH~~gvlHRD---  243 (560)
T KOG0600|consen  169 ILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLE--YCHSRGVLHRD---  243 (560)
T ss_pred             HHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHH--HHhhcCeeecc---
Confidence            889999999875544444544788999998854311               1    11233333  66666655555   


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||.+|||++.+|.+||+|||+|+.+........+..+.|.+ |+|||++.+   ...|+.++|+||+||++.||++|++.
T Consensus       244 IK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLW-YRpPELLLG---~t~Yg~aVDlWS~GCIl~El~~gkPI  319 (560)
T KOG0600|consen  244 IKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLW-YRPPELLLG---ATSYGTAVDLWSVGCILAELFLGKPI  319 (560)
T ss_pred             ccccceEEcCCCCEEeccccceeeccCCCCcccccceEEee-ccChHHhcC---CcccccceeehhhhHHHHHHHcCCCC
Confidence            55999999999999999999999766554433565677889 999999998   36899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~  160 (182)
                      |.| ....+++.+|..
T Consensus       320 ~~G-~tEveQl~kIfk  334 (560)
T KOG0600|consen  320 LQG-RTEVEQLHKIFK  334 (560)
T ss_pred             cCC-ccHHHHHHHHHH
Confidence            999 788899988865

>KOG0033|consensus

Probab=99.95  E-value=8.8e-28  Score=168.92  Aligned_cols=163  Identities=18%  Similarity=0.202  Sum_probs=121.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +|++.+.|+|++.....+.  +....|++++...++++...                   |+++.  |+|..+++|   |
T Consensus        62 rIC~~LqHP~IvrL~~ti~--~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~--yCH~n~IvH---R  134 (355)
T KOG0033|consen   62 RICRKLQHPNIVRLHDSIQ--EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALA--YCHSNGIVH---R  134 (355)
T ss_pred             HHHHhcCCCcEeehhhhhc--ccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCcee---c
Confidence            4888899999874433333  34556788888877776442                   23333  666555555   5


Q ss_pred             CCCCCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |+||+|+++...   .-+||+|||+|.....+..  ...+.|++. |+|||++..    .+|+.++|||+.|+++|-++.
T Consensus       135 DvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~--~~G~~GtP~-fmaPEvvrk----dpy~kpvDiW~cGViLfiLL~  207 (355)
T KOG0033|consen  135 DLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA--WHGFAGTPG-YLSPEVLKK----DPYSKPVDIWACGVILYILLV  207 (355)
T ss_pred             cCChhheeeeeccCCCceeecccceEEEeCCccc--cccccCCCc-ccCHHHhhc----CCCCCcchhhhhhHHHHHHHh
Confidence            555999999654   4589999999988774433  455789999 999999998    899999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      |.+||.+ .+......+|+.+. ..+|   ...+|++++++|++
T Consensus       208 G~~PF~~-~~~~rlye~I~~g~-yd~~~~~w~~is~~Ak~Lvrr  249 (355)
T KOG0033|consen  208 GYPPFWD-EDQHRLYEQIKAGA-YDYPSPEWDTVTPEAKSLIRR  249 (355)
T ss_pred             CCCCCCC-ccHHHHHHHHhccc-cCCCCcccCcCCHHHHHHHHH
Confidence            9999998 45656677777764 2233   23789999999985

>KOG4721|consensus

Probab=99.95  E-value=2.5e-28  Score=188.67  Aligned_cols=162  Identities=19%  Similarity=0.235  Sum_probs=122.7

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      |+.++|+||+ .+..++. ...-+.++|||+..+.|+..|.+                 ....|||.++++|+|++   .
T Consensus       166 LRkLkH~NII-~FkGVCt-qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLK---S  240 (904)
T KOG4721|consen  166 LRKLKHPNII-TFKGVCT-QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLK---S  240 (904)
T ss_pred             HHhccCccee-eEeeeec-CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccC---C
Confidence            5678898886 4444444 34445699999999999886532                 23468988888887766   9


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      -|||++.+..|||+|||-++...+-. ..+. ++|+.. |||||++..    .+.+.++||||||+++|||+||..||.+
T Consensus       241 PNiLIs~~d~VKIsDFGTS~e~~~~S-TkMS-FaGTVa-WMAPEvIrn----ePcsEKVDIwSfGVVLWEmLT~EiPYkd  313 (904)
T KOG4721|consen  241 PNILISYDDVVKISDFGTSKELSDKS-TKMS-FAGTVA-WMAPEVIRN----EPCSEKVDIWSFGVVLWEMLTGEIPYKD  313 (904)
T ss_pred             CceEeeccceEEeccccchHhhhhhh-hhhh-hhhhHh-hhCHHHhhc----CCcccccceehhHHHHHHHHhcCCCccc
Confidence            99999999999999999998866542 2345 899999 999999998    8889999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      . +...++.-+-.+. ..+| |+.+++.++-|++
T Consensus       314 V-dssAIIwGVGsNs-L~LpvPstcP~GfklL~K  345 (904)
T KOG4721|consen  314 V-DSSAIIWGVGSNS-LHLPVPSTCPDGFKLLLK  345 (904)
T ss_pred             c-chheeEEeccCCc-ccccCcccCchHHHHHHH
Confidence            2 3223332222222 2333 6778888888775

>KOG0612|consensus

Probab=99.95  E-value=3.5e-28  Score=199.01  Aligned_cols=157  Identities=20%  Similarity=0.278  Sum_probs=127.6

Q ss_pred             cCCCceEEEeccCccchHHHHH--------------HHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         23 TDDKKVVLVTGKGEAEKVQKEL--------------ETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        23 ~~~~~~~~~~~~~~~~~l~~~l--------------~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      .++.++|+||+|..++++..-+              .+.....|+++|..|.+|||+||+|||++..|++||+|||.+-.
T Consensus       145 QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClk  224 (1317)
T KOG0612|consen  145 QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK  224 (1317)
T ss_pred             cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHh
Confidence            3788999999999999987633              33334567777777788888889999999999999999998866


Q ss_pred             CCchhhhhcccCCCCCCcccCccccCCCCCC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCC
Q psy17162         89 QDDLLIIRGLYGADCDPNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRL  166 (182)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~  166 (182)
                      ......-.....+|||- |.+||+++..+.. +.|+..+|+||+|+.+|||+.|..||.. .+-.+++.+|+.- ....|
T Consensus       225 m~~dG~V~s~~aVGTPD-YISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-dslveTY~KIm~hk~~l~F  302 (1317)
T KOG0612|consen  225 MDADGTVRSSVAVGTPD-YISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-DSLVETYGKIMNHKESLSF  302 (1317)
T ss_pred             cCCCCcEEeccccCCCC-ccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-HHHHHHHHHHhchhhhcCC
Confidence            66555544566899999 9999999865444 7899999999999999999999999988 5778888888763 33556


Q ss_pred             C-CCCCCHHHHHHhhh
Q psy17162        167 P-PGEFSSDFKDFITL  181 (182)
Q Consensus       167 ~-~~~~s~~~~~~i~~  181 (182)
                      | ...+|.++++||..
T Consensus       303 P~~~~VSeeakdLI~~  318 (1317)
T KOG0612|consen  303 PDETDVSEEAKDLIEA  318 (1317)
T ss_pred             CcccccCHHHHHHHHH
Confidence            5 23699999999974

>KOG0614|consensus

Probab=99.95  E-value=4.3e-29  Score=190.46  Aligned_cols=147  Identities=18%  Similarity=0.246  Sum_probs=123.8

Q ss_pred             cCCCceEEEeccCccchHHHHHH--------------H---HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCC
Q psy17162         23 TDDKKVVLVTGKGEAEKVQKELE--------------T---LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFAL   85 (182)
Q Consensus        23 ~~~~~~~~~~~~~~~~~l~~~l~--------------~---~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~   85 (182)
                      -+++++|+.||.|.++.+...+.              +   .+..|||..+++-+|   |||+|++++.+|.+||.|||+
T Consensus       490 rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRD---LKPENllLd~~Gy~KLVDFGF  566 (732)
T KOG0614|consen  490 RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRD---LKPENLLLDNRGYLKLVDFGF  566 (732)
T ss_pred             ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceecc---CChhheeeccCCceEEeehhh
Confidence            37889999999999999987642              1   123578777665555   559999999999999999999


Q ss_pred             CCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCC-
Q psy17162         86 SGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP-  164 (182)
Q Consensus        86 a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~-  164 (182)
                      |+.++.+..  -.++|||+- |.|||.+..    ..++.++|.||||+++||+++|.+||++ .+++.+.+.|+.|... 
T Consensus       567 AKki~~g~K--TwTFcGTpE-YVAPEIILn----KGHD~avDyWaLGIli~ELL~G~pPFs~-~dpmktYn~ILkGid~i  638 (732)
T KOG0614|consen  567 AKKIGSGRK--TWTFCGTPE-YVAPEIILN----KGHDRAVDYWALGILIYELLTGSPPFSG-VDPMKTYNLILKGIDKI  638 (732)
T ss_pred             HHHhccCCc--eeeecCCcc-cccchhhhc----cCcchhhHHHHHHHHHHHHHcCCCCCCC-CchHHHHHHHHhhhhhh
Confidence            999887765  455999999 999999998    8899999999999999999999999999 6888999999998533 


Q ss_pred             CCCCCCCCHHHHHHhhh
Q psy17162        165 RLPPGEFSSDFKDFITL  181 (182)
Q Consensus       165 ~~~~~~~s~~~~~~i~~  181 (182)
                      .+ |..+++.+.++|++
T Consensus       639 ~~-Pr~I~k~a~~Lik~  654 (732)
T KOG0614|consen  639 EF-PRRITKTATDLIKK  654 (732)
T ss_pred             hc-ccccchhHHHHHHH
Confidence            33 67889999998864

>KOG0593|consensus

Probab=99.95  E-value=4.6e-29  Score=179.76  Aligned_cols=144  Identities=15%  Similarity=0.174  Sum_probs=109.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH-------------------HHHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK-------------------ELETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------~l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      .|+.++|.|+|..+ +++. -...+++|+||++...+-.                   .+.++.  |+|++.   +.|||
T Consensus        54 mLKqLkH~NLVnLi-EVFr-rkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~--~cHk~n---~IHRD  126 (396)
T KOG0593|consen   54 MLKQLKHENLVNLI-EVFR-RKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIH--FCHKNN---CIHRD  126 (396)
T ss_pred             HHHhcccchHHHHH-HHHH-hcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhh--hhhhcC---eeccc
Confidence            57789998887332 2222 3466888888877544322                   122333  454444   45666


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.+|.+||||||+|+.+..+.. ..+.++.|.+ |+|||.+.+   ...|+.++|||++||++.||++|++-
T Consensus       127 IKPENILit~~gvvKLCDFGFAR~L~~pgd-~YTDYVATRW-YRaPELLvG---DtqYG~pVDiWAiGCv~aEl~~G~pL  201 (396)
T KOG0593|consen  127 IKPENILITQNGVVKLCDFGFARTLSAPGD-NYTDYVATRW-YRAPELLVG---DTQYGKPVDIWAIGCVFAELLTGEPL  201 (396)
T ss_pred             CChhheEEecCCcEEeccchhhHhhcCCcc-hhhhhhhhhh-ccChhhhcc---cCcCCCcccchhhhHHHHHHhcCCcC
Confidence            779999999999999999999998874322 2566888999 999999987   25899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~  160 (182)
                      |+| .++.+++..|..
T Consensus       202 ~PG-~SDiDQLy~I~k  216 (396)
T KOG0593|consen  202 WPG-RSDIDQLYLIRK  216 (396)
T ss_pred             CCC-cchHHHHHHHHH
Confidence            999 788899888765

>KOG0599|consensus

Probab=99.95  E-value=1.1e-27  Score=170.88  Aligned_cols=170  Identities=16%  Similarity=0.195  Sum_probs=130.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +||+....++.++.+.|..+ ++.-++++++.+..+.+.++|...                 ...|+|+..+.|+|++  
T Consensus        74 ~ILRqv~GHP~II~l~D~ye-s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLK--  150 (411)
T KOG0599|consen   74 SILRQVMGHPYIIDLQDVYE-SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLK--  150 (411)
T ss_pred             HHHHHhcCCCcEEEeeeecc-CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccC--
Confidence            47777666677778888877 555577888888888888876321                 2358888876666555  


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC--CCCCccchHHHHHHHHHHHHhCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP--SNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~--~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                       |+|||++.+..+||+|||+|..+..+..  ....||++. |+|||.+.++...  .+|+..+|+|++|+++|.++.|.+
T Consensus       151 -pENILlddn~~i~isDFGFa~~l~~Gek--LrelCGTPg-YLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcp  226 (411)
T KOG0599|consen  151 -PENILLDDNMNIKISDFGFACQLEPGEK--LRELCGTPG-YLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCP  226 (411)
T ss_pred             -hhheeeccccceEEeccceeeccCCchh--HHHhcCCCc-ccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCC
Confidence             9999999999999999999999877765  334799999 9999999875332  577888999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCC-C--CCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLP-P--GEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~-~--~~~s~~~~~~i~~  181 (182)
                      ||.. ....--+..|++|.. .|. |  ..+|.+.+|+|++
T Consensus       227 PFwH-RkQmlMLR~ImeGky-qF~speWadis~~~KdLIsr  265 (411)
T KOG0599|consen  227 PFWH-RKQMLMLRMIMEGKY-QFRSPEWADISATVKDLISR  265 (411)
T ss_pred             chhH-HHHHHHHHHHHhccc-ccCCcchhhccccHHHHHHH
Confidence            9976 445455666777643 232 2  2788999999875

>KOG0658|consensus

Probab=99.95  E-value=5e-28  Score=177.88  Aligned_cols=145  Identities=18%  Similarity=0.240  Sum_probs=115.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCC-ceE--EEeccCccchHHHH-----------------------HHHHHHHHHhhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDK-KVV--LVTGKGEAEKVQKE-----------------------LETLRCIYIQDYH   56 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~l~~~-----------------------l~~~~~~~l~~~~   56 (182)
                      .|++.+.|+|+|..++.+....+. .++  +++||.. ++|.+.                       +.+++  |||+.+
T Consensus        69 ~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~--yLh~~~  145 (364)
T KOG0658|consen   69 QIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLA--YLHSHG  145 (364)
T ss_pred             HHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHH--HHHhcC
Confidence            377889999999888877765555 444  6777754 234332                       35555  999988


Q ss_pred             hhcccccCCCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      +||+|++   |.|+|++.+ |.+||||||.|+.+..+..  ...+.++.. |+|||.+.+   ...|+.+.||||.||++
T Consensus       146 IcHRDIK---PqNlLvD~~tg~LKicDFGSAK~L~~~ep--niSYicSRy-YRaPELifg---a~~Yt~~IDiWSaGCV~  216 (364)
T KOG0658|consen  146 ICHRDIK---PQNLLVDPDTGVLKICDFGSAKVLVKGEP--NISYICSRY-YRAPELIFG---ATEYTTSIDIWSAGCVM  216 (364)
T ss_pred             cccCCCC---hheEEEcCCCCeEEeccCCcceeeccCCC--ceeEEEecc-ccCHHHHcC---ccccCceeEEhhhhHHH
Confidence            8887766   999999988 9999999999998876654  333667788 999999987   36899999999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      .||+.|++-|.| .+..+++..|..
T Consensus       217 aELl~g~plFpG-~s~~dQL~eIik  240 (364)
T KOG0658|consen  217 AELLKGQPLFPG-DSSVDQLVEIIK  240 (364)
T ss_pred             HHHhcCCcccCC-CCHHHHHHHHHH
Confidence            999999999999 677777766644

>KOG0574|consensus

Probab=99.95  E-value=6.9e-29  Score=179.34  Aligned_cols=148  Identities=26%  Similarity=0.460  Sum_probs=125.1

Q ss_pred             CCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCC
Q psy17162         24 DDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFAL   85 (182)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~   85 (182)
                      .+.++.++||||-.+++-+++..-                  .++|||..+.+|++++   ..|||++.+|..||+|||.
T Consensus        99 K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIK---AGNILLNT~G~AKLADFGV  175 (502)
T KOG0574|consen   99 KHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIK---AGNILLNTDGIAKLADFGV  175 (502)
T ss_pred             cCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcc---cccEEEcccchhhhhhccc
Confidence            456678999999999988754211                  1358887777766655   9999999999999999999


Q ss_pred             CCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCC
Q psy17162         86 SGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPR  165 (182)
Q Consensus        86 a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~  165 (182)
                      |..+++....+.+ ..|++. |||||++..    -.|+.++||||||++..||..|++||.+ ..++..++.|-..++|.
T Consensus       176 AGQLTDTMAKRNT-VIGTPF-WMAPEVI~E----IGY~~~ADIWSLGITaIEMAEG~PPYsD-IHPMRAIFMIPT~PPPT  248 (502)
T KOG0574|consen  176 AGQLTDTMAKRNT-VIGTPF-WMAPEVIEE----IGYDTKADIWSLGITAIEMAEGRPPYSD-IHPMRAIFMIPTKPPPT  248 (502)
T ss_pred             cchhhhhHHhhCc-cccCcc-cccHHHHHH----hccchhhhHhhhcchhhhhhcCCCCccc-ccccceeEeccCCCCCC
Confidence            9998877654445 899999 999999998    7899999999999999999999999998 67888888888888888


Q ss_pred             CC-CCCCCHHHHHHhhh
Q psy17162        166 LP-PGEFSSDFKDFITL  181 (182)
Q Consensus       166 ~~-~~~~s~~~~~~i~~  181 (182)
                      |. |+.||+++-|||+.
T Consensus       249 F~KPE~WS~~F~DFi~~  265 (502)
T KOG0574|consen  249 FKKPEEWSSEFNDFIRS  265 (502)
T ss_pred             CCChHhhhhHHHHHHHH
Confidence            87 77899999999874

>KOG0984|consensus

Probab=99.95  E-value=1.3e-27  Score=164.10  Aligned_cols=124  Identities=36%  Similarity=0.700  Sum_probs=103.5

Q ss_pred             HHHHHhhcchhc----ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC
Q psy17162         48 RCIYIQDYHLCV----RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD  123 (182)
Q Consensus        48 ~~~~l~~~~~~h----~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~  123 (182)
                      ++..+|+..+.|    +.|||+||+|||++.+|++|+||||.+..+.++..  .+.-.|+.+ |+|||.+..+-+...|+
T Consensus       154 a~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA--kt~daGCkp-YmaPEri~~e~n~~gY~  230 (282)
T KOG0984|consen  154 AVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA--KTMDAGCKP-YMAPERINPELNQKGYS  230 (282)
T ss_pred             HHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhH--HHHhcCCCc-cCChhhcCcccCcccce
Confidence            344445444444    46788889999999999999999999988887765  343568888 99999998766557899


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHH
Q psy17162        124 IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSD  174 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~  174 (182)
                      .++|+||||+++.||.++..|+..+..+++++.++...++|.+|...+|++
T Consensus       231 vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp~~~FS~e  281 (282)
T KOG0984|consen  231 VKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLPADTFSPE  281 (282)
T ss_pred             eehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCcccccCCC
Confidence            999999999999999999999999999999999999999898976667754

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.95  E-value=1.3e-26  Score=175.46  Aligned_cols=165  Identities=13%  Similarity=0.187  Sum_probs=121.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++....+++++..+.+... +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+|
T Consensus        53 ~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---HrDlk  128 (323)
T cd05616          53 VLALSGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGII---YRDLK  128 (323)
T ss_pred             HHHhccCCCeEeeEEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEE---ecCCC
Confidence            4455667788777776665 45678899999988887664311                 123477776554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|++. |+|||++..    ..++.++|+||+||++|+|++|+.||.
T Consensus       129 p~Nill~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvil~elltg~~Pf~  202 (323)
T cd05616         129 LDNVMLDSEGHIKIADFGMCKENMWDGVT-TKTFCGTPD-YIAPEIIAY----QPYGKSVDWWAFGVLLYEMLAGQAPFE  202 (323)
T ss_pred             HHHeEECCCCcEEEccCCCceecCCCCCc-cccCCCChh-hcCHHHhcC----CCCCCccchhchhHHHHHHHhCCCCCC
Confidence            99999999999999999998654322111 222567888 999999987    788999999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+.... ..+ |..+|+++++++++
T Consensus       203 ~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  234 (323)
T cd05616         203 G-EDEDELFQSIMEHN-VAY-PKSMSKEAVAICKG  234 (323)
T ss_pred             C-CCHHHHHHHHHhCC-CCC-CCcCCHHHHHHHHH
Confidence            8 45555555555543 445 45688888888763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0611|consensus

Probab=99.95  E-value=4e-27  Score=176.02  Aligned_cols=164  Identities=19%  Similarity=0.224  Sum_probs=122.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------H---HHHHhhcchhcccccCCCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------R---CIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------~---~~~l~~~~~~h~~~~~lk~~   68 (182)
                      .|+..++|++++ .++.+++ ...+++++|||...+.++++++.-           -   ....|++|.....|||||.+
T Consensus       105 eIMSsLNHPhII-~IyEVFE-NkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLE  182 (668)
T KOG0611|consen  105 EIMSSLNHPHII-QIYEVFE-NKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLE  182 (668)
T ss_pred             HHHhhcCCCcee-ehhhhhc-CCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchh
Confidence            377889998776 5566666 455689999999999999976321           0   12333333333567777899


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      |||++.++.+||+|||++..+.+...  .+++||++. |++||.+.+    .+|. +.+|.||||+++|.+..|..||.|
T Consensus       183 NILLD~N~NiKIADFGLSNly~~~kf--LqTFCGSPL-YASPEIvNG----~PY~GPEVDsWsLGvLLYtLVyGtMPFDG  255 (668)
T KOG0611|consen  183 NILLDQNNNIKIADFGLSNLYADKKF--LQTFCGSPL-YASPEIVNG----TPYKGPEVDSWSLGVLLYTLVYGTMPFDG  255 (668)
T ss_pred             heeecCCCCeeeeccchhhhhccccH--HHHhcCCcc-cCCccccCC----CCCCCCccchhhHHHHHHHHhhcccccCC
Confidence            99999999999999999987766544  445999999 999999988    6776 889999999999999999999999


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i  179 (182)
                       .+-...+.+|.+|.....   ..++++..+|
T Consensus       256 -~Dhk~lvrQIs~GaYrEP---~~PSdA~gLI  283 (668)
T KOG0611|consen  256 -RDHKRLVRQISRGAYREP---ETPSDASGLI  283 (668)
T ss_pred             -chHHHHHHHhhcccccCC---CCCchHHHHH
Confidence             344455556666653322   2345555555

>KOG0582|consensus

Probab=99.95  E-value=7.4e-27  Score=175.61  Aligned_cols=153  Identities=20%  Similarity=0.275  Sum_probs=116.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~~   64 (182)
                      .++.+.|+|++...-.+..  +..++.||.++..+++.+.+...                   ++.|||..+.+||+++ 
T Consensus        77 ~msl~~HPNIv~~~~sFvv--~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvK-  153 (516)
T KOG0582|consen   77 TMSLIDHPNIVTYHCSFVV--DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVK-  153 (516)
T ss_pred             HhhhcCCCCcceEEEEEEe--cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccc-
Confidence            4567889888855444443  55678889988888887753211                   1348888877766655 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh--c-ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--G-LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~-~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        +.|||++.+|.|||+|||.+..+-.+....  . .++.|++. |||||++..+-  .+|+.++||||||++..|+.+|
T Consensus       154 --AgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~-wmAPEvl~q~~--~GYdfKaDIwSfGITA~ELA~G  228 (516)
T KOG0582|consen  154 --AGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPC-WMAPEVLMQQL--HGYDFKADIWSFGITACELAHG  228 (516)
T ss_pred             --cccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCccc-ccChHHhhhcc--cCccchhhhhhhhHHHHHHhcC
Confidence              999999999999999999876654433211  1 34789999 99999965433  6899999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCC
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPR  165 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~  165 (182)
                      +.||..+ .++..+...+++.+|.
T Consensus       229 ~aPf~k~-pPmkvLl~tLqn~pp~  251 (516)
T KOG0582|consen  229 HAPFSKY-PPMKVLLLTLQNDPPT  251 (516)
T ss_pred             CCCcccC-ChHHHHHHHhcCCCCC
Confidence            9999984 7778788888888663

>KOG0201|consensus

Probab=99.95  E-value=1.4e-28  Score=184.27  Aligned_cols=144  Identities=28%  Similarity=0.420  Sum_probs=118.3

Q ss_pred             CCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCC
Q psy17162         25 DKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFAL   85 (182)
Q Consensus        25 ~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~   85 (182)
                      +..+.++|||+.++++.+-+                   .++  .|+|..+.+|++++   +.||++..+|.+||+|||.
T Consensus        83 g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l--~ylH~~~kiHrDIK---aanil~s~~g~vkl~DfgV  157 (467)
T KOG0201|consen   83 GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGL--DYLHSEKKIHRDIK---AANILLSESGDVKLADFGV  157 (467)
T ss_pred             cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHh--hhhhhcceeccccc---ccceeEeccCcEEEEecce
Confidence            34445677888777776633                   333  48888877777666   9999999999999999999


Q ss_pred             CCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCC
Q psy17162         86 SGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPR  165 (182)
Q Consensus        86 a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~  165 (182)
                      +.........+ .+++|++. |||||++.+    ..|+.++||||||++.+||++|.+|+.. ..++..++.|....||.
T Consensus       158 a~ql~~~~~rr-~tfvGTPf-wMAPEVI~~----~~Y~~KADIWSLGITaiEla~GePP~s~-~hPmrvlflIpk~~PP~  230 (467)
T KOG0201|consen  158 AGQLTNTVKRR-KTFVGTPF-WMAPEVIKQ----SGYDTKADIWSLGITAIELAKGEPPHSK-LHPMRVLFLIPKSAPPR  230 (467)
T ss_pred             eeeeechhhcc-cccccccc-ccchhhhcc----ccccchhhhhhhhHHHHHHhcCCCCCcc-cCcceEEEeccCCCCCc
Confidence            98877665544 44999999 999999998    7999999999999999999999999998 47777788887788777


Q ss_pred             CCCCCCCHHHHHHhhh
Q psy17162        166 LPPGEFSSDFKDFITL  181 (182)
Q Consensus       166 ~~~~~~s~~~~~~i~~  181 (182)
                      + ...+|+.+++||..
T Consensus       231 L-~~~~S~~~kEFV~~  245 (467)
T KOG0201|consen  231 L-DGDFSPPFKEFVEA  245 (467)
T ss_pred             c-ccccCHHHHHHHHH
Confidence            7 45899999999863

>KOG0660|consensus

Probab=99.95  E-value=1.8e-27  Score=174.62  Aligned_cols=145  Identities=19%  Similarity=0.192  Sum_probs=108.2

Q ss_pred             HHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHH-------------------HHHHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQK-------------------ELETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~-------------------~l~~~~~~~l~~~~~~h~   60 (182)
                      +|+.|+|.|++.. .++...    ...++|++++.. ..+|.+                   .|.++.  |+|+.+++|+
T Consensus        74 lLr~~~HeNIi~l-~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLK--yiHSAnViHR  149 (359)
T KOG0660|consen   74 LLRHLRHENIIGL-LDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLK--YIHSANVIHR  149 (359)
T ss_pred             HHHHhcCCCcceE-EeecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcc--hhhccccccc
Confidence            6888998777644 444432    457788888774 233433                   344444  7777666655


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCch-hhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDL-LIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      |++   |.|++++.+..+|+||||+|+..... .....+.++.|.+ |.|||.+..   ...|+.+.||||+||++.||+
T Consensus       150 DLK---PsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRW-YRAPElll~---~~~Yt~aiDiWSvGCI~AEmL  222 (359)
T KOG0660|consen  150 DLK---PSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRW-YRAPELLLN---SSEYTKAIDIWSVGCILAEML  222 (359)
T ss_pred             ccc---hhheeeccCCCEEeccccceeeccccCcccchhcceeeee-ecCHHHHhc---cccccchhhhhhhhHHHHHHH
Confidence            555   99999999999999999999887431 1112455788999 999998875   368999999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      +|++-|.| ++..+++..|+.
T Consensus       223 ~gkplFpG-~d~v~Ql~lI~~  242 (359)
T KOG0660|consen  223 TGKPLFPG-KDYVHQLQLILE  242 (359)
T ss_pred             cCCCCCCC-CchHHHHHHHHH
Confidence            99999999 677777777654

>KOG0589|consensus

Probab=99.94  E-value=4.3e-27  Score=179.07  Aligned_cols=166  Identities=16%  Similarity=0.239  Sum_probs=134.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+.|+|+| ...+....++..++++|+|++++++.+.+..                   ++..|+|+.++.|+|  
T Consensus        55 ~lis~~~hP~iv-~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRD--  131 (426)
T KOG0589|consen   55 DLLSKLLHPNIV-EYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRD--  131 (426)
T ss_pred             HHHHhccCCCee-eeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhccc--
Confidence            467778887776 4455556577778999999999999885421                   123578766655555  


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                       +|+.||+++.++.|||.|||+|+........ ....+|++. |++||.+.+    .+|+.++|||||||.+|||++-++
T Consensus       132 -lK~~Nifltk~~~VkLgDfGlaK~l~~~~~~-a~tvvGTp~-YmcPEil~d----~pYn~KSDiWsLGC~~yEm~~lk~  204 (426)
T KOG0589|consen  132 -LKCANIFLTKDKKVKLGDFGLAKILNPEDSL-ASTVVGTPY-YMCPEILSD----IPYNEKSDIWSLGCCLYEMCTLKP  204 (426)
T ss_pred             -chhhhhhccccCceeecchhhhhhcCCchhh-hheecCCCc-ccCHHHhCC----CCCCccCcchhhcchHHHHHhccc
Confidence             5599999999999999999999988766522 334899999 999999999    899999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|.+ .+....+.+|.++...++ |..+|.+++.+|+
T Consensus       205 aF~a-~~m~~Li~ki~~~~~~Pl-p~~ys~el~~lv~  239 (426)
T KOG0589|consen  205 AFKA-SNMSELILKINRGLYSPL-PSMYSSELRSLVK  239 (426)
T ss_pred             ccCc-cchHHHHHHHhhccCCCC-CccccHHHHHHHH
Confidence            9999 577788888888876777 5678888888775

>KOG0594|consensus

Probab=99.94  E-value=1.1e-26  Score=170.43  Aligned_cols=147  Identities=19%  Similarity=0.188  Sum_probs=114.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCC-----ceEEEeccCcc---------------c---h----HHHHHHHHHHHHHhhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDK-----KVVLVTGKGEA---------------E---K----VQKELETLRCIYIQDY   55 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---------------~---~----l~~~l~~~~~~~l~~~   55 (182)
                      ++++.++|.|+++.+.++......     .+++++++...               .   .    +.|.+.++.  |||++
T Consensus        62 sllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~--~~H~~  139 (323)
T KOG0594|consen   62 SLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLA--FLHSH  139 (323)
T ss_pred             HHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHH--HHHhC
Confidence            578999999977888888775553     78888877321               0   1    233445555  88888


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      +++|||++   |.|++++.+|.+||+|||+|+...-+... .+..+++.+ |.|||++.+   ...|+..+||||+||++
T Consensus       140 ~IlHRDLK---PQNlLi~~~G~lKlaDFGlAra~~ip~~~-yt~evvTlW-YRaPEvLlG---s~~Ys~~vDiWs~GcIf  211 (323)
T KOG0594|consen  140 GILHRDLK---PQNLLISSSGVLKLADFGLARAFSIPMRT-YTPEVVTLW-YRAPEVLLG---STSYSTSVDIWSLGCIF  211 (323)
T ss_pred             CeecccCC---cceEEECCCCcEeeeccchHHHhcCCccc-ccccEEEee-ccCHHHhcC---CCcCCCCcchHhHHHHH
Confidence            87777666   99999999999999999999876543321 344678888 999999987   24799999999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      .||+++++.|.+ ....+++.+|.+
T Consensus       212 aEm~~~~~LFpG-~se~~ql~~If~  235 (323)
T KOG0594|consen  212 AEMFTRRPLFPG-DSEIDQLFRIFR  235 (323)
T ss_pred             HHHHhCCCCCCC-CcHHHHHHHHHH
Confidence            999999999999 567788888754

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=3.8e-26  Score=172.91  Aligned_cols=165  Identities=13%  Similarity=0.170  Sum_probs=120.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++..+.++++++.+.+... +...++++||+..++++.+.+..                 .+..|||+.+++   |+|+|
T Consensus        53 ~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv---H~dlk  128 (324)
T cd05587          53 VLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGII---YRDLK  128 (324)
T ss_pred             HHHhcCCCCceeeeEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---ecCCC
Confidence            5566778887777766665 45678999999988888654311                 123477776554   55556


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|+.. |+|||++.+    ..++.++|+||+||++|+|++|+.||.
T Consensus       129 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslGvil~elltG~~pf~  202 (324)
T cd05587         129 LDNVMLDAEGHIKIADFGMCKENIFGGKT-TRTFCGTPD-YIAPEIIAY----QPYGKSVDWWAFGVLLYEMLAGQPPFD  202 (324)
T ss_pred             HHHeEEcCCCCEEEeecCcceecCCCCCc-eeeecCCcc-ccChhhhcC----CCCCcccchhhhHHHHHHHHhCCCCCC
Confidence            99999999999999999988643221111 122567888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+... .+.+ |..+++++++++++
T Consensus       203 ~-~~~~~~~~~i~~~-~~~~-~~~~~~~~~~li~~  234 (324)
T cd05587         203 G-EDEDELFQSIMEH-NVSY-PKSLSKEAVSICKG  234 (324)
T ss_pred             C-CCHHHHHHHHHcC-CCCC-CCCCCHHHHHHHHH
Confidence            8 4554555555444 3455 45688888888763

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.94  E-value=5.3e-26  Score=174.66  Aligned_cols=168  Identities=20%  Similarity=0.199  Sum_probs=119.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .++..++|++++... +... +...++++||+..++++.+.+..                 .+..|||+.+++   |+|+
T Consensus        53 ~il~~~~~~~iv~~~-~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~giv---HrDl  127 (363)
T cd05628          53 DILVEADSLWVVKMF-YSFQ-DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFI---HRDI  127 (363)
T ss_pred             HHHHhCCCCCcceEE-EEEe-cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---ecCC
Confidence            466777777766443 3333 45678899999998887765421                 123477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh----------------------------------hhcccCCCCCCcccCcc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI----------------------------------IRGLYGADCDPNFIRPE  111 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~----------------------------------~~~~~~~~~~~~~~aPe  111 (182)
                      ||+||+++.++.+||+|||+++.......                                  ......+|++. |+|||
T Consensus       128 Kp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~-Y~aPE  206 (363)
T cd05628         128 KPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPD-YIAPE  206 (363)
T ss_pred             CHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcc-ccCHH
Confidence            69999999999999999999865432100                                  00112478888 99999


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCCCC-CCCHHHHHHhhh
Q psy17162        112 RIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       112 ~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~-~~s~~~~~~i~~  181 (182)
                      ++.+    ..++.++|+||+||++|+|++|..||.+ ..+.+...++... ....+|+. .+|+++++++.+
T Consensus       207 ~~~~----~~~~~~~DvwSlGvil~ell~G~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  273 (363)
T cd05628         207 VFMQ----TGYNKLCDWWSLGVIMYEMLIGYPPFCS-ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILR  273 (363)
T ss_pred             HHcC----CCCCCchhhhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHH
Confidence            9987    7788999999999999999999999987 4555666666543 23345433 578999998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0663|consensus

Probab=99.94  E-value=9.4e-27  Score=169.73  Aligned_cols=147  Identities=18%  Similarity=0.189  Sum_probs=112.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccc--hHHH-----------------HHHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAE--KVQK-----------------ELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~-----------------~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +||..++|+|||-.=..+.-.+-..+|++|+|++..  ++.+                 .|.++.  |||..-++|+|  
T Consensus       127 niLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk--~lH~~wilHRD--  202 (419)
T KOG0663|consen  127 NILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLK--HLHDNWILHRD--  202 (419)
T ss_pred             HHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHH--HHhhceeEecc--
Confidence            367888888887433334444557799999996531  1222                 233444  77777666555  


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                       ||++|+|++..|.+|++|||+|+.++.+... .+..+-|.+ |+|||.+.+   ...|+.+.|+||+||++.|++++++
T Consensus       203 -LK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~-~T~lVVTLW-YRaPELLLG---~~tyst~iDMWSvGCI~aE~l~~kP  276 (419)
T KOG0663|consen  203 -LKTSNLLLSHKGILKIADFGLAREYGSPLKP-YTPLVVTLW-YRAPELLLG---AKTYSTAVDMWSVGCIFAELLTQKP  276 (419)
T ss_pred             -cchhheeeccCCcEEecccchhhhhcCCccc-CcceEEEee-ecCHHHhcC---CcccCcchhhhhHHHHHHHHHhcCC
Confidence             5599999999999999999999998877432 344667888 999999997   4689999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~  160 (182)
                      -|.| ....+++.+|.+
T Consensus       277 lf~G-~sE~dQl~~If~  292 (419)
T KOG0663|consen  277 LFPG-KSEIDQLDKIFK  292 (419)
T ss_pred             CCCC-CchHHHHHHHHH
Confidence            9999 688889888865

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=2.3e-26  Score=174.13  Aligned_cols=164  Identities=13%  Similarity=0.202  Sum_probs=117.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. ..... +...+++++|+..++++.+.+..                 ....|||+.+++   |+|||
T Consensus        48 ~l~~l~hp~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iv---HrDlk  122 (323)
T cd05571          48 VLQNTRHPFLTAL-KYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVV---YRDLK  122 (323)
T ss_pred             HHHhCCCCCCCCE-EEEEE-cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---eCCCC
Confidence            5667788777644 33333 45678899999998887654311                 112477776655   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||.
T Consensus       123 p~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~Pf~  196 (323)
T cd05571         123 LENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFY  196 (323)
T ss_pred             HHHEEECCCCCEEEeeCCCCcccccCCCc-ccceecCcc-ccChhhhcC----CCCCccccCcccchhhhhhhcCCCCCC
Confidence            99999999999999999998653322211 122568888 999999987    778899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + .........+..+ ...+ |..+++++++++++
T Consensus       197 ~-~~~~~~~~~~~~~-~~~~-p~~~~~~~~~li~~  228 (323)
T cd05571         197 N-QDHEKLFELILME-EIRF-PRTLSPEAKSLLAG  228 (323)
T ss_pred             C-CCHHHHHHHHHcC-CCCC-CCCCCHHHHHHHHH
Confidence            7 3443434444444 3555 45688999998863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=1.5e-25  Score=170.49  Aligned_cols=122  Identities=18%  Similarity=0.208  Sum_probs=86.5

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .|+|+||+||+++.++.+||+|||+++........ ......++.. |+|||++..    ..++.++||
T Consensus       188 ~~LH~~~i---vHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDi  259 (338)
T cd05102         188 EFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK-WMAPESIFD----KVYTTQSDV  259 (338)
T ss_pred             HHHHHCCE---ECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc-ccCcHHhhc----CCCCcccCH
Confidence            36776654   55566699999999999999999999765332211 1111233455 999999987    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||.+..........+..+..+.. +..+++++++++.
T Consensus       260 wslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  311 (338)
T cd05102         260 WSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA-PENATPEIYRIML  311 (338)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            999999999997 99999874333333333344444444 5567888888774

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.94  E-value=6.5e-26  Score=171.66  Aligned_cols=164  Identities=13%  Similarity=0.201  Sum_probs=119.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++..+.+++++..+..... +...+++++|+..++++.+.+..                 .+..|||+.+++   |+|+|
T Consensus        53 ~l~~~~~~~~i~~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~iv---HrDik  128 (323)
T cd05615          53 VLALQDKPPFLTQLHSCFQ-TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGII---YRDLK  128 (323)
T ss_pred             HHHhccCCCchhheeeEEe-cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee---ccCCC
Confidence            4556677787776666655 45578999999998887664311                 123477776554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... .....|+.. |+|||++.+    ..++.++|+||+||++|+|++|.+||.
T Consensus       129 p~Nill~~~~~ikL~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslGvil~elltG~~pf~  202 (323)
T cd05615         129 LDNVMLDSEGHIKIADFGMCKEHMVDGVT-TRTFCGTPD-YIAPEIIAY----QPYGKSVDWWAYGVLLYEMLAGQPPFD  202 (323)
T ss_pred             HHHeEECCCCCEEEeccccccccCCCCcc-ccCccCCcc-ccCHHHHcC----CCCCCccchhhhHHHHHHHHhCCCCCC
Confidence            99999999999999999998754322211 122567878 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      + .........+.... ..+ |..+|++++++++
T Consensus       203 ~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~  233 (323)
T cd05615         203 G-EDEDELFQSIMEHN-VSY-PKSLSKEAVSICK  233 (323)
T ss_pred             C-CCHHHHHHHHHhCC-CCC-CccCCHHHHHHHH
Confidence            8 45555555555543 445 4557888888875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6e-26  Score=171.02  Aligned_cols=165  Identities=20%  Similarity=0.218  Sum_probs=119.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.+... +...+++++++..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        45 ~~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~---HrDl  119 (312)
T cd05585          45 TVLAQVNCPFIVP-LKFSFQ-SPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVI---YRDL  119 (312)
T ss_pred             HHHHhCCCCcEec-eeeEEe-cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---eCCC
Confidence            3667788877765 344443 45678999999998888765411                 123477776655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.++|+|||++......... ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       120 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslGvil~el~tg~~pf  193 (312)
T cd05585         120 KPENILLDYQGHIALCDFGLCKLNMKDDDK-TNTFCGTPE-YLAPELLLG----HGYTKAVDWWTLGVLLYEMLTGLPPF  193 (312)
T ss_pred             CHHHeEECCCCcEEEEECcccccCccCCCc-cccccCCcc-cCCHHHHcC----CCCCCccceechhHHHHHHHhCCCCc
Confidence            699999999999999999998754332221 222568888 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+ +..+ +..+++++++++++
T Consensus       194 ~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~li~~  226 (312)
T cd05585         194 YD-ENVNEMYRKILQE-PLRF-PDGFDRDAKDLLIG  226 (312)
T ss_pred             CC-CCHHHHHHHHHcC-CCCC-CCcCCHHHHHHHHH
Confidence            87 3444445555544 3455 45688999998863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.94  E-value=4e-26  Score=175.70  Aligned_cols=172  Identities=21%  Similarity=0.254  Sum_probs=120.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++.+.+..                .+..|||+.++   .|+|||
T Consensus        95 ~i~~~~~hp~iv~~-~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~I---vHrDLK  169 (370)
T cd05621          95 DIMAFANSPWVVQL-FCAFQ-DDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL---IHRDVK  169 (370)
T ss_pred             HHHHhCCCCCEeeE-EEEEE-cCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCC
Confidence            46677788776644 44444 56678999999988887764321                11246776655   455566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++..............+|++. |+|||++........++.++|+||+||++|+|++|.+||.
T Consensus       170 p~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~-Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~  248 (370)
T cd05621         170 PDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY  248 (370)
T ss_pred             HHHEEECCCCCEEEEecccceecccCCceecccCCCCcc-cCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence            999999999999999999987654332211223678888 9999998762221236789999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhC-CCCCCCCC-CCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQD-DPPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~-~~~~~~~~-~~s~~~~~~i~~  181 (182)
                      + .........+... ....+|.. .+|+.+++++.+
T Consensus       249 ~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  284 (370)
T cd05621         249 A-DSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICA  284 (370)
T ss_pred             C-CCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHH
Confidence            8 4555556666543 23344332 578999998865

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=4.7e-26  Score=172.25  Aligned_cols=165  Identities=14%  Similarity=0.213  Sum_probs=118.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++....++++++.+.+... +...+++++|+..++++...+..                 .+..|||+.+++   |+|+|
T Consensus        48 il~~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---HrDik  123 (321)
T cd05591          48 ILALAAKHPFLTALHCCFQ-TKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVI---YRDLK  123 (321)
T ss_pred             HHHhccCCCCccceeeEEE-cCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee---ccCCC
Confidence            4444545555566666665 45678999999988887653311                 113477777654   55556


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|+.. |+|||++..    ..++.++|+||+||++|+|++|+.||.
T Consensus       124 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslG~il~el~tg~~Pf~  197 (321)
T cd05591         124 LDNILLDAEGHCKLADFGMCKEGILNGVT-TTTFCGTPD-YIAPEILQE----LEYGPSVDWWALGVLMYEMMAGQPPFE  197 (321)
T ss_pred             HHHeEECCCCCEEEeecccceecccCCcc-ccccccCcc-ccCHHHHcC----CCCCCccceechhHHHHHHhcCCCCCC
Confidence            99999999999999999988654322211 222567888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+..+. ..+ |..+++++.+++++
T Consensus       198 ~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~ll~~  229 (321)
T cd05591         198 A-DNEDDLFESILHDD-VLY-PVWLSKEAVSILKA  229 (321)
T ss_pred             C-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            8 45556666665554 334 45678888888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=7.4e-26  Score=171.30  Aligned_cols=165  Identities=16%  Similarity=0.168  Sum_probs=119.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++..+ +... ++..+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        52 ~il~~l~hp~iv~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv---H~dl  126 (323)
T cd05584          52 NILEAVKHPFIVDLI-YAFQ-TGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGII---YRDL  126 (323)
T ss_pred             HHHHhCCCCchhcee-eEEe-cCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee---cCCC
Confidence            467888888877544 3333 45678899999988887664311                 112477776654   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... .....|+.. |+|||++..    ..++.++|+||+||++|+|++|+.||
T Consensus       127 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~G~~pf  200 (323)
T cd05584         127 KPENILLDAQGHVKLTDFGLCKESIHEGTV-THTFCGTIE-YMAPEILMR----SGHGKAVDWWSLGALMYDMLTGAPPF  200 (323)
T ss_pred             CHHHeEECCCCCEEEeeCcCCeecccCCCc-ccccCCCcc-ccChhhccC----CCCCCcceecccHHHHHHHhcCCCCC
Confidence            699999999999999999998653322221 122567788 999999987    67789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .........+..+. ..+ |..+++++++++++
T Consensus       201 ~~-~~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~  233 (323)
T cd05584         201 TA-ENRKKTIDKILKGK-LNL-PPYLTPEARDLLKK  233 (323)
T ss_pred             CC-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            88 45555566665554 445 44578889888863

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.94  E-value=1e-25  Score=170.12  Aligned_cols=158  Identities=15%  Similarity=0.230  Sum_probs=113.4

Q ss_pred             CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcEE
Q psy17162          9 NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      .|+|+ +.+.+... +...+++++|+..++++.+.+..                 .+..|||+.++   .|+|+||+||+
T Consensus        54 ~hp~i-~~~~~~~~-~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---vH~dlkp~Nil  128 (316)
T cd05592          54 EHPFL-THLFCTFQ-TKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGI---IYRDLKLDNVL  128 (316)
T ss_pred             CCCCc-cceeeEEE-cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EeCCCCHHHeE
Confidence            45554 45555554 45678899999988887664311                 11347777655   45556699999


Q ss_pred             EcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCc
Q psy17162         72 QRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP  151 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~  151 (182)
                      ++.++.+||+|||++......... ....+|+.. |+|||++.+    ..++.++|+||+||++|+|++|..||.+ ...
T Consensus       129 l~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslG~il~ell~G~~Pf~~-~~~  201 (316)
T cd05592         129 LDKDGHIKIADFGMCKENMNGEGK-ASTFCGTPD-YIAPEILKG----QKYNESVDWWSFGVLLYEMLIGQSPFHG-EDE  201 (316)
T ss_pred             ECCCCCEEEccCcCCeECCCCCCc-cccccCCcc-ccCHHHHcC----CCCCCcccchhHHHHHHHHHhCCCCCCC-CCH
Confidence            999999999999998754322211 222567888 999999987    6788999999999999999999999988 344


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        152 FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       152 ~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .+....+. ...+.+ |..++++++++++
T Consensus       202 ~~~~~~i~-~~~~~~-~~~~~~~~~~ll~  228 (316)
T cd05592         202 DELFDSIL-NDRPHF-PRWISKEAKDCLS  228 (316)
T ss_pred             HHHHHHHH-cCCCCC-CCCCCHHHHHHHH
Confidence            44444443 344555 4568888988875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0696|consensus

Probab=99.94  E-value=8.2e-27  Score=174.70  Aligned_cols=164  Identities=15%  Similarity=0.217  Sum_probs=120.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------HH---HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------ET---LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------~~---~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +|.+-+.+++++.+....+ +-..+|.+|||..+++|.-.+              .+   ..+-+||+.+++-++   ||
T Consensus       402 vLAL~~kppFL~qlHScFQ-TmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRD---LK  477 (683)
T KOG0696|consen  402 VLALPGKPPFLVQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRD---LK  477 (683)
T ss_pred             heecCCCCchHHHHHHHhh-hhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeee---cc
Confidence            4445556666665554444 344588999999999964322              11   123367776665555   55


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      .+||+++.+|++||+|||+++..--......+ +||++. |+|||.+..    .+|+.++|+||+|+++|||+.|++||.
T Consensus       478 LDNvmLd~eGHiKi~DFGmcKEni~~~~TTkT-FCGTPd-YiAPEIi~Y----qPYgksvDWWa~GVLLyEmlaGQpPFd  551 (683)
T KOG0696|consen  478 LDNVMLDSEGHIKIADFGMCKENIFDGVTTKT-FCGTPD-YIAPEIIAY----QPYGKSVDWWAFGVLLYEMLAGQPPFD  551 (683)
T ss_pred             ccceEeccCCceEeeecccccccccCCcceee-ecCCCc-ccccceEEe----cccccchhHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999775443333345 999999 999999998    899999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      + .+. +.+++.+....... |..+|.++.++++
T Consensus       552 G-eDE-~elF~aI~ehnvsy-PKslSkEAv~ick  582 (683)
T KOG0696|consen  552 G-EDE-DELFQAIMEHNVSY-PKSLSKEAVAICK  582 (683)
T ss_pred             C-CCH-HHHHHHHHHccCcC-cccccHHHHHHHH
Confidence            9 344 55555444444556 5678999888764

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=8.7e-26  Score=170.74  Aligned_cols=164  Identities=13%  Similarity=0.179  Sum_probs=116.4

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +....++++++.+.+... +...++++|||..++++.+.+..                 ....|||+.+++|   +|+||
T Consensus        49 l~~~~~h~~iv~~~~~~~-~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH---~dlkp  124 (320)
T cd05590          49 LSLARNHPFLTQLYCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIY---RDLKL  124 (320)
T ss_pred             HHhccCCCchhceeeEEE-cCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---CCCCH
Confidence            334433444455555554 45678899999998887654311                 1234777766554   55669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.+||+|||++......... .....|++. |+|||++..    ..++.++|+||+||++|+|++|+.||.+
T Consensus       125 ~NIli~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~Pf~~  198 (320)
T cd05590         125 DNVLLDHEGHCKLADFGMCKEGIFNGKT-TSTFCGTPD-YIAPEILQE----MLYGPSVDWWAMGVLLYEMLCGHAPFEA  198 (320)
T ss_pred             HHeEECCCCcEEEeeCCCCeecCcCCCc-ccccccCcc-ccCHHHHcC----CCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence            9999999999999999998653322211 222567888 999999987    6788999999999999999999999988


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                       ....+....+..+. +.+ |..+++++++++++
T Consensus       199 -~~~~~~~~~i~~~~-~~~-~~~~~~~~~~li~~  229 (320)
T cd05590         199 -ENEDDLFEAILNDE-VVY-PTWLSQDAVDILKA  229 (320)
T ss_pred             -CCHHHHHHHHhcCC-CCC-CCCCCHHHHHHHHH
Confidence             45555555555543 444 45688999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG4645|consensus

Probab=99.94  E-value=7.4e-28  Score=199.26  Aligned_cols=172  Identities=17%  Similarity=0.236  Sum_probs=135.6

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++|++.++|+|+|..  .-.+.....+++.||||.++.|.+-+..                 ....|||.+|++|+|.+ 
T Consensus      1285 m~vlE~lnHpNlV~Y--yGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK- 1361 (1509)
T KOG4645|consen 1285 MKVLEGLNHPNLVRY--YGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIK- 1361 (1509)
T ss_pred             HHHHHhccCcccccc--CceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCC-
Confidence            468999999999843  2234466778899999999998774311                 12348888876665555 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        |.||+++.+|.+|+.|||.|.....+...   ......||+. |||||++.+... .+...++||||+||++.||+||
T Consensus      1362 --~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~-YMAPEvit~t~~-kG~~~A~DiWslGCVVlEM~tG 1437 (1509)
T KOG4645|consen 1362 --PANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPM-YMAPEVITGTKG-KGHGGAADIWSLGCVVLEMATG 1437 (1509)
T ss_pred             --ccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCch-hcCchhhccccc-CCCCcchhhhcccceEEEeecC
Confidence              99999999999999999999876654310   0112678999 999999987332 4566899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +.||..+++...++.++..|..|.+| +.+|++.+||+..
T Consensus      1438 krPW~~~dne~aIMy~V~~gh~Pq~P-~~ls~~g~dFle~ 1476 (1509)
T KOG4645|consen 1438 KRPWAELDNEWAIMYHVAAGHKPQIP-ERLSSEGRDFLEH 1476 (1509)
T ss_pred             CCchhhccchhHHHhHHhccCCCCCc-hhhhHhHHHHHHH
Confidence            99999988999999999999999995 5599999999863

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.94  E-value=6.6e-26  Score=171.99  Aligned_cols=162  Identities=16%  Similarity=0.254  Sum_probs=120.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++..+ +... +...+++++|+..++++.+.+..                 ....|||+.+++   |+||
T Consensus        70 ~~l~~l~hp~iv~~~-~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---H~dl  144 (329)
T PTZ00263         70 SILMELSHPFIVNMM-CSFQ-DENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDII---YRDL  144 (329)
T ss_pred             HHHHhCCCCCCCcEE-EEEE-cCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee---ecCC
Confidence            367778888876544 3333 45678999999988887664311                 123477777655   5555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++.......    ...+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       145 kp~NIll~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~elltg~~pf  215 (329)
T PTZ00263        145 KPENLLLDNKGHVKVTDFGFAKKVPDRT----FTLCGTPE-YLAPEVIQS----KGHGKAVDWWTMGVLLYEFIAGYPPF  215 (329)
T ss_pred             CHHHEEECCCCCEEEeeccCceEcCCCc----ceecCChh-hcCHHHHcC----CCCCCcceeechHHHHHHHHcCCCCC
Confidence            6999999999999999999987654332    12567888 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ..+......+..+. +.+ |..+++++++++++
T Consensus       216 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  248 (329)
T PTZ00263        216 FD-DTPFRIYEKILAGR-LKF-PNWFDGRARDLVKG  248 (329)
T ss_pred             CC-CCHHHHHHHHhcCC-cCC-CCCCCHHHHHHHHH
Confidence            87 45555566665553 455 45688999998864

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.94  E-value=1e-25  Score=173.50  Aligned_cols=172  Identities=19%  Similarity=0.234  Sum_probs=120.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|+|++... +... ++..+++++|+..++++.+.+..                .+..|||+.+++   |+|||
T Consensus        95 ~i~~~~~hp~iv~~~-~~~~-~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---HrDLk  169 (371)
T cd05622          95 DIMAFANSPWVVQLF-YAFQ-DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI---HRDVK  169 (371)
T ss_pred             HHHHhCCCCCCCeEE-EEEE-cCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEE---eCCCC
Confidence            456677887776543 3333 45678899999988887664321                112467766554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++..............+|++. |+|||++........++.++|+||+||++|+|++|..||.
T Consensus       170 p~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~-y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  248 (371)
T cd05622         170 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  248 (371)
T ss_pred             HHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCcc-ccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCC
Confidence            999999999999999999987654332211223678888 9999998752211237789999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCC-CCCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDD-PPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~-~~~~~-~~~~s~~~~~~i~~  181 (182)
                      + .........+.... ...+| +..+|++++++|.+
T Consensus       249 ~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  284 (371)
T cd05622         249 A-DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA  284 (371)
T ss_pred             C-CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHH
Confidence            8 45555556665432 23343 23688999998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=2.5e-25  Score=176.49  Aligned_cols=165  Identities=21%  Similarity=0.238  Sum_probs=121.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++... +... +...++++||+..+++|.+.+..                     ....|+|+.+   +.|
T Consensus       118 ~l~~l~Hpniv~~~-~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH  192 (478)
T PTZ00267        118 CLAACDHFGIVKHF-DDFK-SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMH  192 (478)
T ss_pred             HHHhCCCCCEeEEE-EEEE-ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEE
Confidence            56778888876544 4444 45678999999999888653311                     0123555554   556


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +||||+||+++.++.+||+|||++........ ......+|++. |+|||++..    ..++.++|+||+||++|+|++|
T Consensus       193 rDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg  267 (478)
T PTZ00267        193 RDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPY-YLAPELWER----KRYSKKADMWSLGVILYELLTL  267 (478)
T ss_pred             CCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCcc-ccCHhHhCC----CCCCcHHhHHHHHHHHHHHHhC
Confidence            66779999999999999999999976544321 11223568888 999999987    7788999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..||.+ ....+.+..+..+..+++ +..+|++++++++
T Consensus       268 ~~Pf~~-~~~~~~~~~~~~~~~~~~-~~~~s~~~~~li~  304 (478)
T PTZ00267        268 HRPFKG-PSQREIMQQVLYGKYDPF-PCPVSSGMKALLD  304 (478)
T ss_pred             CCCCCC-CCHHHHHHHHHhCCCCCC-CccCCHHHHHHHH
Confidence            999987 455566666666665555 4568888888875

>KOG0032|consensus

Probab=99.94  E-value=2e-25  Score=170.88  Aligned_cols=166  Identities=19%  Similarity=0.202  Sum_probs=126.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH----------------HHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL----------------RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~l~~~~~~h~~~~~lk   66 (182)
                      +|++.+..+++++.+.+..+ +...++++||.+.++.+.+.+...                +..|+|+   .+++|+|+|
T Consensus        87 ~il~~l~~hpniv~l~~~~e-~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~---~gvvHrDlK  162 (382)
T KOG0032|consen   87 AILQQLSGHPNIVQLKDAFE-DPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHS---LGVVHRDLK  162 (382)
T ss_pred             HHHHhccCCCCEEEEEEEEE-cCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHh---CCceeccCC
Confidence            47888884444556677766 445899999999999998865432                1235555   456666677


Q ss_pred             CCcEEEcCC----CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         67 VDTFHQRLQ----FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        67 ~~nil~~~~----~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |+|+++...    +.+|++|||++........  ....+|++. |+|||++..    .+|+..+|+||+|+++|.|++|.
T Consensus       163 pEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~--~~~~~Gtp~-y~APEvl~~----~~y~~~~DiWS~Gvi~yiLL~G~  235 (382)
T KOG0032|consen  163 PENLLLASKDEGSGRIKLIDFGLAKFIKPGER--LHTIVGTPE-YVAPEVLGG----RPYGDEVDVWSIGVILYILLSGV  235 (382)
T ss_pred             HHHeeeccccCCCCcEEEeeCCCceEccCCce--EeeecCCcc-ccCchhhcC----CCCCcccchhHHHHHHHHHhhCC
Confidence            999999654    4799999999988766322  344899999 999999997    78999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      +||.+ .........+..+.. .++   ...+|..+++||++
T Consensus       236 ~PF~~-~~~~~~~~~i~~~~~-~f~~~~w~~is~~akd~i~~  275 (382)
T KOG0032|consen  236 PPFWG-ETEFEIFLAILRGDF-DFTSEPWDDISESAKDFIRK  275 (382)
T ss_pred             CCCcC-CChhHHHHHHHcCCC-CCCCCCccccCHHHHHHHHH
Confidence            99999 455566667777643 232   23678999999874

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=1.6e-25  Score=169.06  Aligned_cols=160  Identities=14%  Similarity=0.203  Sum_probs=112.8

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      +.|+++ +.+.+... +...++++||+..++++.+.+..                 .+..|||+.+++|   +|+||+||
T Consensus        53 ~~~~~i-~~~~~~~~-~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH---rDlkp~Ni  127 (316)
T cd05620          53 WENPFL-THLYCTFQ-TKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIY---RDLKLDNV  127 (316)
T ss_pred             cCCCCc-cCeeEEEE-eCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---cCCCHHHe
Confidence            345444 45555554 45678899999988887654311                 1124777766554   55669999


Q ss_pred             EEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q psy17162         71 HQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS  150 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~  150 (182)
                      +++.++.++|+|||++......... ....+|+.. |+|||++.+    ..++.++|+||+||++|+|++|..||.+ ..
T Consensus       128 l~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslGvil~el~~g~~Pf~~-~~  200 (316)
T cd05620         128 MLDRDGHIKIADFGMCKENVFGDNR-ASTFCGTPD-YIAPEILQG----LKYTFSVDWWSFGVLLYEMLIGQSPFHG-DD  200 (316)
T ss_pred             EECCCCCEEeCccCCCeecccCCCc-eeccCCCcC-ccCHHHHcC----CCCCcccchhhhHHHHHHHHhCCCCCCC-CC
Confidence            9999999999999988643221111 223567888 999999987    6788999999999999999999999987 34


Q ss_pred             cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        151 PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       151 ~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..+....+ ....+.+ |..++.++++++++
T Consensus       201 ~~~~~~~~-~~~~~~~-~~~~~~~~~~li~~  229 (316)
T cd05620         201 EDELFESI-RVDTPHY-PRWITKESKDILEK  229 (316)
T ss_pred             HHHHHHHH-HhCCCCC-CCCCCHHHHHHHHH
Confidence            43444443 3334555 45688999998863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=1.1e-25  Score=170.80  Aligned_cols=170  Identities=18%  Similarity=0.174  Sum_probs=117.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++++++++.+.+... +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        56 ~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv---HrDl  131 (332)
T cd05614          56 NVLEHVRQSPFLVTLHYAFQ-TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIV---YRDI  131 (332)
T ss_pred             HHHHhccCCCCcccEEEEEe-cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcE---ecCC
Confidence            36667766666666666655 55678899999988887664311                 123477776655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++..............+|+.. |+|||++.+   ...++.++|+||+||++|+|++|..||
T Consensus       132 kp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~---~~~~~~~~DiwslG~il~elltg~~pf  207 (332)
T cd05614         132 KLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIE-YMAPEIIRG---KGGHGKAVDWWSLGILIFELLTGASPF  207 (332)
T ss_pred             CHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCcc-ccCHHHhcC---CCCCCCccccccchhhhhhhhcCCCCC
Confidence            6999999999999999999987643322211222567888 999999875   124678999999999999999999999


Q ss_pred             CCC--CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTW--GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ...  ......+........+.+ +..+++.+++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  244 (332)
T cd05614         208 TLEGERNTQSEVSRRILKCDPPF-PSFIGPEAQDLLHK  244 (332)
T ss_pred             CCCCCCCCHHHHHHHHhcCCCCC-CCCCCHHHHHHHHH
Confidence            642  122233333333334555 45688899988864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.94  E-value=8.9e-26  Score=172.02  Aligned_cols=162  Identities=16%  Similarity=0.181  Sum_probs=119.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        83 ~~l~~l~hp~Iv~~-~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---HrDL  157 (340)
T PTZ00426         83 KILNYINHPFCVNL-YGSFK-DESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIV---YRDL  157 (340)
T ss_pred             HHHHhCCCCCCcce-EEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---ccCC
Confidence            46677888877644 44444 45678899999988887765421                 112467776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++.......    ....|++. |+|||++.+    ..++.++|+||+||++|+|++|.+||
T Consensus       158 kp~NILl~~~~~ikL~DFG~a~~~~~~~----~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvil~ell~G~~Pf  228 (340)
T PTZ00426        158 KPENLLLDKDGFIKMTDFGFAKVVDTRT----YTLCGTPE-YIAPEILLN----VGHGKAADWWTLGIFIYEILVGCPPF  228 (340)
T ss_pred             CHHHEEECCCCCEEEecCCCCeecCCCc----ceecCChh-hcCHHHHhC----CCCCccccccchhhHHHHHhcCCCCC
Confidence            6999999999999999999987654321    22568888 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ..+......+..+. ..+ |..+++.+++++++
T Consensus       229 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  261 (340)
T PTZ00426        229 YA-NEPLLIYQKILEGI-IYF-PKFLDNNCKHLMKK  261 (340)
T ss_pred             CC-CCHHHHHHHHhcCC-CCC-CCCCCHHHHHHHHH
Confidence            88 45555555665554 344 45578888888864

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=1.5e-25  Score=172.64  Aligned_cols=172  Identities=22%  Similarity=0.241  Sum_probs=120.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|++++... +... +...+++++|+..++++.+.+..                .+..|||+.+++   |+|+|
T Consensus        95 ~il~~~~h~~iv~~~-~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv---HrDLk  169 (370)
T cd05596          95 DIMAHANSEWIVQLH-YAFQ-DDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFI---HRDVK  169 (370)
T ss_pred             HHHHhCCCCCcceEE-EEEe-cCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCee---ccCCC
Confidence            466777887776443 3333 55678899999988887765321                113477776654   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||.+..............+|++. |+|||++........++.++|+||+||++|+|++|.+||.
T Consensus       170 p~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  248 (370)
T cd05596         170 PDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  248 (370)
T ss_pred             HHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcC-eECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence            999999999999999999987654322211223578888 9999998752222347789999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCC-CCCCCCC-CCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDD-PPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~-~~~~~~~-~~s~~~~~~i~~  181 (182)
                      + ........++..+. ...+|.. .+|++++++|++
T Consensus       249 ~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  284 (370)
T cd05596         249 A-DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICA  284 (370)
T ss_pred             C-CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHH
Confidence            8 45555566665532 2334322 578999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0604|consensus

Probab=99.93  E-value=7.5e-26  Score=163.06  Aligned_cols=162  Identities=18%  Similarity=0.241  Sum_probs=117.9

Q ss_pred             CCCCcEEEEEEeeec---CCCceEEEeccCccchHHHHHH-------------------HHHHHHHhhcchhcccccCCC
Q psy17162          9 NQDEIGVTVSSVKTT---DDKKVVLVTGKGEAEKVQKELE-------------------TLRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~-------------------~~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ..+++++.+.++.+.   ..+-++++||..+++.|+..+.                   +.+..|||+..+.|+|++   
T Consensus       112 s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlK---  188 (400)
T KOG0604|consen  112 SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLK---  188 (400)
T ss_pred             cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCC---
Confidence            344555666666533   4466779999999999887542                   123457777766665555   


Q ss_pred             CCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         67 VDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        67 ~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+|+|....   ..+||+|||+|+....+..  ..+.|.+++ |.|||++-.    ..|+.++|+||+|+++|.|++|.+
T Consensus       189 pENLLyt~t~~na~lKLtDfGFAK~t~~~~~--L~TPc~TPy-YvaPevlg~----eKydkscdmwSlgVimYIlLCGyP  261 (400)
T KOG0604|consen  189 PENLLYTTTSPNAPLKLTDFGFAKETQEPGD--LMTPCFTPY-YVAPEVLGP----EKYDKSCDMWSLGVIMYILLCGYP  261 (400)
T ss_pred             hhheeeecCCCCcceEecccccccccCCCcc--ccCCccccc-ccCHHHhCc----hhcCCCCCccchhHHHHHhhcCCC
Confidence            999999653   5689999999988765444  344889999 999999987    789999999999999999999999


Q ss_pred             CCCCCC---CcHHHHHHHhhCCCCCCCCC---CCCHHHHHHhhh
Q psy17162        144 PYDTWG---SPFEQLKQVVQDDPPRLPPG---EFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~---~~~~~~~~i~~~~~~~~~~~---~~s~~~~~~i~~  181 (182)
                      ||-...   -...-..+|..|. ..||..   ++|..++|+|++
T Consensus       262 PFYS~hg~aispgMk~rI~~gq-y~FP~pEWs~VSe~aKdlIR~  304 (400)
T KOG0604|consen  262 PFYSNHGLAISPGMKRRIRTGQ-YEFPEPEWSCVSEAAKDLIRK  304 (400)
T ss_pred             cccccCCccCChhHHhHhhccC-ccCCChhHhHHHHHHHHHHHH
Confidence            996521   1222234455554 556532   678899999975

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.93  E-value=1.9e-25  Score=169.45  Aligned_cols=163  Identities=13%  Similarity=0.218  Sum_probs=116.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|++++.. ..... +...++++|||..++++...+..                 .+..|||+.+++   |+|+|
T Consensus        48 ~l~~l~hp~iv~~-~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv---HrDik  122 (328)
T cd05593          48 VLKNTRHPFLTSL-KYSFQ-TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIV---YRDLK  122 (328)
T ss_pred             HHHhCCCCCCcce-EEEEE-cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---ecccC
Confidence            5667788776543 33333 45678899999988887654311                 113477777655   45566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|++. |+|||++..    ..++.++|+||+||++|+|++|..||.
T Consensus       123 p~NIll~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslGvil~elltG~~Pf~  196 (328)
T cd05593         123 LENLMLDKDGHIKITDFGLCKEGITDAAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFY  196 (328)
T ss_pred             HHHeEECCCCcEEEecCcCCccCCCcccc-cccccCCcC-ccChhhhcC----CCCCccCCccccchHHHHHhhCCCCCC
Confidence            99999999999999999998753322211 222568888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      + ....+....+..+. ..+ |..++++++++++
T Consensus       197 ~-~~~~~~~~~~~~~~-~~~-p~~~~~~~~~li~  227 (328)
T cd05593         197 N-QDHEKLFELILMED-IKF-PRTLSADAKSLLS  227 (328)
T ss_pred             C-CCHHHHHHHhccCC-ccC-CCCCCHHHHHHHH
Confidence            7 34444444444433 445 4568889998886

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4279|consensus

Probab=99.93  E-value=2.4e-27  Score=186.95  Aligned_cols=167  Identities=24%  Similarity=0.390  Sum_probs=130.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH----------------------HHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE----------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------l~~~~~~~l~~~~~~h~   60 (182)
                      ++++.++|.|+|..+..+.+  ++.+-++||...++++-.-                      |+++.  |||+.+++|+
T Consensus       624 aLH~~LrHkNIVrYLGs~se--nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLk--YLHen~IVHR  699 (1226)
T KOG4279|consen  624 ALHSTLRHKNIVRYLGSVSE--NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLK--YLHENKIVHR  699 (1226)
T ss_pred             HHHHHHhhHhHHHHhhccCC--CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhh--hhhhcceeec
Confidence            36788999999988777554  4456688898888877553                      45555  7877765555


Q ss_pred             cccCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        61 ~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                         |+|.+|+|++. .|.+||+|||-++.+..-.+...+ +.|+.- |||||++.. + ..+|+.++|||||||+..||.
T Consensus       700 ---DIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET-FTGTLQ-YMAPEvIDq-G-~RGYG~aADIWS~GCT~vEMA  772 (1226)
T KOG4279|consen  700 ---DIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQ-YMAPEVIDQ-G-PRGYGKAADIWSFGCTMVEMA  772 (1226)
T ss_pred             ---cccCCcEEEeeccceEEecccccchhhccCCccccc-cccchh-hhChHhhcc-C-CcCCCchhhhhhccceeEeec
Confidence               55599999965 599999999998776544443344 888887 999999975 2 268889999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||+|||..+..+...++++ +-...|++ |+.+|.++++||.+
T Consensus       773 TGrPPF~ElgspqAAMFkVGmyKvHP~i-Peelsaeak~Filr  814 (1226)
T KOG4279|consen  773 TGRPPFVELGSPQAAMFKVGMYKVHPPI-PEELSAEAKNFILR  814 (1226)
T ss_pred             cCCCCeeecCChhHhhhhhcceecCCCC-cHHHHHHHHHHHHH
Confidence            9999999888888888876 33556778 56799999998753

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.93  E-value=3e-25  Score=168.05  Aligned_cols=164  Identities=13%  Similarity=0.208  Sum_probs=116.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|+|++.. .+... +...+++++||..++++...+..                 .+..|||+.+++   |+|+|
T Consensus        48 ~l~~l~hp~i~~~-~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---H~Dlk  122 (323)
T cd05595          48 VLQNTRHPFLTAL-KYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV---YRDIK  122 (323)
T ss_pred             HHHhCCCCCCcce-eeEEe-cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---ecCCC
Confidence            5667788777643 33333 45678899999988887654311                 112477776655   45566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... .....|+.. |+|||++..    ..++.++|+||+||++|+|++|..||.
T Consensus       123 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvil~ell~g~~Pf~  196 (323)
T cd05595         123 LENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFY  196 (323)
T ss_pred             HHHEEEcCCCCEEecccHHhccccCCCCc-cccccCCcC-cCCcccccC----CCCCchhchhhhHHHHHHHHhCCCCCC
Confidence            99999999999999999988653222211 122567888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + .........+..+. ..+ |..+++++++++++
T Consensus       197 ~-~~~~~~~~~~~~~~-~~~-p~~~~~~~~~li~~  228 (323)
T cd05595         197 N-QDHERLFELILMEE-IRF-PRTLSPEAKSLLAG  228 (323)
T ss_pred             C-CCHHHHHHHHhcCC-CCC-CCCCCHHHHHHHHH
Confidence            7 34444444444433 445 45688999988863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1e-25  Score=168.20  Aligned_cols=162  Identities=15%  Similarity=0.208  Sum_probs=119.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++++.++|+|++.. .+... +...+++++|+..++++.+.+..                 .+..|+|+.+++|   +|+
T Consensus        53 ~~l~~l~hp~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H---~dl  127 (291)
T cd05612          53 RVLKEVSHPFIIRL-FWTEH-DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVY---RDL  127 (291)
T ss_pred             HHHHhCCCCcHhhh-Hhhhc-cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee---cCC
Confidence            36777888887643 33333 45678899999888877664311                 1234777776655   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++.......    ...+|++. |+|||++..    ..++.++|+||+||++|+|++|..||
T Consensus       128 kp~NIli~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlG~il~~l~~g~~pf  198 (291)
T cd05612         128 KPENILLDKEGHIKLTDFGFAKKLRDRT----WTLCGTPE-YLAPEVIQS----KGHNKAVDWWALGILIYEMLVGYPPF  198 (291)
T ss_pred             CHHHeEECCCCCEEEEecCcchhccCCc----ccccCChh-hcCHHHHcC----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999987654322    12567788 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ +..+++.+++++++
T Consensus       199 ~~-~~~~~~~~~i~~~~-~~~-~~~~~~~~~~li~~  231 (291)
T cd05612         199 FD-DNPFGIYEKILAGK-LEF-PRHLDLYAKDLIKK  231 (291)
T ss_pred             CC-CCHHHHHHHHHhCC-cCC-CccCCHHHHHHHHH
Confidence            88 45555566665554 445 45578899998863

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0603|consensus

Probab=99.93  E-value=1.9e-25  Score=174.21  Aligned_cols=161  Identities=20%  Similarity=0.242  Sum_probs=118.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------HHH--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------ETL--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------~~~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      ++....++++++.+.+... +.+.++.+++...++.+.+.+              ..+  ...|||+.   |+.|||+||
T Consensus       368 ~~~~~~~h~niv~~~~v~~-~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp  443 (612)
T KOG0603|consen  368 ISLLVRDHPNIVKSHDVYE-DGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKP  443 (612)
T ss_pred             hhhhhcCCCcceeecceec-CCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCCh
Confidence            4455556666666666666 788999999998888776632              111  12366664   556666669


Q ss_pred             CcEEE-cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         68 DTFHQ-RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        68 ~nil~-~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      +|||+ +.+++++|+|||.++......   .+ .+-+.. |.|||++..    ..|+.++||||||+++|+|++|+.||.
T Consensus       444 ~NIL~~~~~g~lrltyFG~a~~~~~~~---~t-p~~t~~-y~APEvl~~----~~yt~acD~WSLGvlLy~ML~G~tp~~  514 (612)
T KOG0603|consen  444 GNILLDGSAGHLRLTYFGFWSELERSC---DT-PALTLQ-YVAPEVLAI----QEYTEACDWWSLGVLLYEMLTGRTLFA  514 (612)
T ss_pred             hheeecCCCCcEEEEEechhhhCchhh---cc-cchhhc-ccChhhhcc----CCCCcchhhHHHHHHHHHHHhCCCccc
Confidence            99999 588999999999998876651   23 566667 999999997    789999999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .-....++..++.   .+++ ..++|.++++++++
T Consensus       515 ~~P~~~ei~~~i~---~~~~-s~~vS~~AKdLl~~  545 (612)
T KOG0603|consen  515 AHPAGIEIHTRIQ---MPKF-SECVSDEAKDLLQQ  545 (612)
T ss_pred             cCCchHHHHHhhc---CCcc-ccccCHHHHHHHHH
Confidence            7323323333322   2334 36899999999874

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=3.5e-25  Score=167.16  Aligned_cols=160  Identities=14%  Similarity=0.201  Sum_probs=113.3

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      +.|++++ .+.+... +...+++++|+..++++.+.+..                 .+..|||+.+++   |+|+||+||
T Consensus        53 ~~hp~iv-~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~iv---Hrdikp~Ni  127 (316)
T cd05619          53 WEHPFLT-HLYCTFQ-TKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIV---YRDLKLDNI  127 (316)
T ss_pred             cCCCcCc-ceEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---eCCCCHHHE
Confidence            4565554 5555554 45678899999988887664321                 112467766554   555669999


Q ss_pred             EEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q psy17162         71 HQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS  150 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~  150 (182)
                      +++.++.+||+|||++......... .....|+.. |+|||++.+    ..++.++|+||+||++|+|++|..||.+ ..
T Consensus       128 l~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslG~il~el~~G~~pf~~-~~  200 (316)
T cd05619         128 LLDTDGHIKIADFGMCKENMLGDAK-TCTFCGTPD-YIAPEILLG----QKYNTSVDWWSFGVLLYEMLIGQSPFHG-HD  200 (316)
T ss_pred             EECCCCCEEEccCCcceECCCCCCc-eeeecCCcc-ccCHHHHcC----CCCCchhhhhhHHHHHHHHHhCCCCCCC-CC
Confidence            9999999999999998653222111 122567778 999999987    6788999999999999999999999987 34


Q ss_pred             cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        151 PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       151 ~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..+....+..+ .+.+ |..++.++++++.+
T Consensus       201 ~~~~~~~i~~~-~~~~-~~~~~~~~~~li~~  229 (316)
T cd05619         201 EEELFQSIRMD-NPCY-PRWLTREAKDILVK  229 (316)
T ss_pred             HHHHHHHHHhC-CCCC-CccCCHHHHHHHHH
Confidence            44444444333 3445 45688889988753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG1095|consensus

Probab=99.93  E-value=7.9e-26  Score=186.51  Aligned_cols=167  Identities=20%  Similarity=0.322  Sum_probs=124.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------------HHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------------RCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------------~~~~l~~~~~~h   59 (182)
                      +++.|+|+|++-.+. +.- +....+++.||+++++|..++...                        .+.||++.|++|
T Consensus       748 ~m~~f~HpNiv~liG-v~l-~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvH  825 (1025)
T KOG1095|consen  748 LMSKFDHPNIVSLIG-VCL-DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVH  825 (1025)
T ss_pred             HHhcCCCcceeeEEE-eec-CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcC
Confidence            677899988875443 333 266778899999999999987433                        236787776666


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCC-CCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGAD-CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~-~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +|+-   .+|+|++.+..+||+|||+|+.+-.....+.. ..+ -+.+|||||.+..    +.++.++||||||+++||+
T Consensus       826 RDLA---aRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~-~~a~lPvkWm~PEsl~d----~iFtskSDvWsFGVllWEi  897 (1025)
T KOG1095|consen  826 RDLA---ARNCLLDERRVVKIADFGLARDIYDKDYYRKH-GEAMLPVKWMPPESLKD----GIFTSKSDVWSFGVLLWEI  897 (1025)
T ss_pred             cchh---hhheeecccCcEEEcccchhHhhhhchheecc-CccccceecCCHHHHhh----cccccccchhhhHHHHHHH
Confidence            6555   99999999999999999999844333221111 111 2236999999998    8999999999999999999


Q ss_pred             Hh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh-hhC
Q psy17162        139 AT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       139 ~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i-~~~  182 (182)
                      +| |..||.+ .+..+.+.....+.+.+. |..+++.+.+++ +||
T Consensus       898 fslG~~PY~~-~~n~~v~~~~~~ggRL~~-P~~CP~~ly~lM~~CW  941 (1025)
T KOG1095|consen  898 FSLGATPYPS-RSNFEVLLDVLEGGRLDP-PSYCPEKLYQLMLQCW  941 (1025)
T ss_pred             HhCCCCCCCC-cchHHHHHHHHhCCccCC-CCCCChHHHHHHHHHc
Confidence            99 9999998 567677777777775544 666777766654 556

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.93  E-value=2e-25  Score=172.52  Aligned_cols=168  Identities=18%  Similarity=0.186  Sum_probs=117.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|++++... +... +...++++||++.++++.+.+..                 .+..|+|+.++   .|+|+
T Consensus        53 ~il~~~~h~~iv~~~-~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~i---vHrDl  127 (382)
T cd05625          53 DILAEADNEWVVRLY-YSFQ-DKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGF---IHRDI  127 (382)
T ss_pred             HHHHhCCCCcCCeEE-EEEE-eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCC
Confidence            467778887776544 4433 45678999999988877664311                 12347777655   45566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchh----------------------------------------------hhhccc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLL----------------------------------------------IIRGLY   99 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~----------------------------------------------~~~~~~   99 (182)
                      ||+||+++.++.+||+|||++.......                                              ......
T Consensus       128 Kp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (382)
T cd05625         128 KPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHS  207 (382)
T ss_pred             CHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccc
Confidence            6999999999999999999875321000                                              000012


Q ss_pred             CCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCCC-CCCCHHHHH
Q psy17162        100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLPP-GEFSSDFKD  177 (182)
Q Consensus       100 ~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~-~~~s~~~~~  177 (182)
                      .+|++. |+|||++..    ..++.++|+||+||++|+|++|.+||.+ ..+.+....+... ....+|+ ..+|+++++
T Consensus       208 ~~gt~~-Y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~  281 (382)
T cd05625         208 LVGTPN-YIAPEVLLR----TGYTQLCDWWSVGVILYEMLVGQPPFLA-QTPLETQMKVINWQTSLHIPPQAKLSPEASD  281 (382)
T ss_pred             cccCcc-cCCHHHhcC----CCCCCeeeEEechHHHHHHHhCCCCCCC-CCHHHHHHHHHccCCCcCCCCcccCCHHHHH
Confidence            467888 999999987    6788999999999999999999999988 4555555555432 2233432 368899999


Q ss_pred             Hhhh
Q psy17162        178 FITL  181 (182)
Q Consensus       178 ~i~~  181 (182)
                      +|.+
T Consensus       282 li~~  285 (382)
T cd05625         282 LIIK  285 (382)
T ss_pred             HHHH
Confidence            8753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0577|consensus

Probab=99.93  E-value=1.7e-26  Score=179.32  Aligned_cols=162  Identities=21%  Similarity=0.267  Sum_probs=127.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccc--hHHHH-----------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAE--KVQKE-----------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~-----------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      .|+.++|+|.+-.-.++-.  +..-.+|||||.+.  ++.+.                 |.+++  |||+++.+|+|++ 
T Consensus        79 FL~~l~HPntieYkgCyLr--e~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLa--YLHS~~~IHRDiK-  153 (948)
T KOG0577|consen   79 FLRQLRHPNTIEYKGCYLR--EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA--YLHSHNRIHRDIK-  153 (948)
T ss_pred             HHHhccCCCcccccceeec--cchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHH--HHHHhhHHhhhcc-
Confidence            5678899999843322222  22234788987653  34441                 23344  8888877776655 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                        ..|||++..|.|||+|||.|........     ++||++ |||||++.. ...+.|+-++||||||+++.++..++||
T Consensus       154 --AGNILLse~g~VKLaDFGSAsi~~PAns-----FvGTPy-wMAPEVILA-MDEGqYdgkvDvWSLGITCIELAERkPP  224 (948)
T KOG0577|consen  154 --AGNILLSEPGLVKLADFGSASIMAPANS-----FVGTPY-WMAPEVILA-MDEGQYDGKVDVWSLGITCIELAERKPP  224 (948)
T ss_pred             --ccceEecCCCeeeeccccchhhcCchhc-----ccCCcc-ccchhHhee-ccccccCCccceeeccchhhhhhhcCCC
Confidence              9999999999999999999876554333     999999 999999884 3337899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..++ +.+..+.+|.++..|.++...||+.+++||.
T Consensus       225 lFnM-NAMSALYHIAQNesPtLqs~eWS~~F~~Fvd  259 (948)
T KOG0577|consen  225 LFNM-NAMSALYHIAQNESPTLQSNEWSDYFRNFVD  259 (948)
T ss_pred             ccCc-hHHHHHHHHHhcCCCCCCCchhHHHHHHHHH
Confidence            9995 6779999999999999987789999999986

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=4.3e-25  Score=167.42  Aligned_cols=167  Identities=16%  Similarity=0.223  Sum_probs=117.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++..+.++++++.+.+... +...+++++|+..++++.+.+..                 .+..|+|+.+++|   +|+|
T Consensus        48 ~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH---rDlk  123 (327)
T cd05617          48 VFEQASSNPFLVGLHSCFQ-TTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIY---RDLK  123 (327)
T ss_pred             HHHhhcCCCCEeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec---cCCC
Confidence            3445555555666666555 45678999999998887654311                 1234777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||.
T Consensus       124 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslGvil~ell~g~~pf~  197 (327)
T cd05617         124 LDNVLLDADGHIKLTDYGMCKEGLGPGDT-TSTFCGTPN-YIAPEILRG----EEYGFSVDWWALGVLMFEMMAGRSPFD  197 (327)
T ss_pred             HHHEEEeCCCCEEEeccccceeccCCCCc-eecccCCcc-cCCHHHHCC----CCCCchheeehhHHHHHHHHhCCCCCC
Confidence            99999999999999999998653222111 122678888 999999987    788899999999999999999999996


Q ss_pred             CC-----CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TW-----GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~-----~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..     ....+.........+..+ |..+|..+++++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~li~~  236 (327)
T cd05617         198 IITDNPDMNTEDYLFQVILEKPIRI-PRFLSVKASHVLKG  236 (327)
T ss_pred             ccCCCcccccHHHHHHHHHhCCCCC-CCCCCHHHHHHHHH
Confidence            31     123334444444444556 45688888888763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0986|consensus

Probab=99.93  E-value=2.1e-25  Score=168.34  Aligned_cols=170  Identities=15%  Similarity=0.134  Sum_probs=118.4

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHH----------------HHHHHHHHHHHhhcchhcccccCC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQ----------------KELETLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------~~l~~~~~~~l~~~~~~h~~~~~l   65 (182)
                      +.||+..+.+ +|+.+....+ +-..+.+|+..+.+++|.                .+..+..+..|...|-..++.||+
T Consensus       236 k~iL~kV~s~-FiVslaYAfe-Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDL  313 (591)
T KOG0986|consen  236 KQILEKVSSP-FIVSLAYAFE-TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDL  313 (591)
T ss_pred             HHHHHHhccC-cEEEEeeeec-CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccC
Confidence            3467777765 5655544333 333455555555555542                123333333444444445667777


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+|||+|..|+++|+|+|+|..+.....  ....+||.. |||||++..    +.|+.++|+||+||++|+|+.|+.||
T Consensus       314 KPeNILLDd~GhvRISDLGLAvei~~g~~--~~~rvGT~G-YMAPEvl~n----e~Y~~s~Dwf~lGCllYemi~G~sPF  386 (591)
T KOG0986|consen  314 KPENILLDDHGHVRISDLGLAVEIPEGKP--IRGRVGTVG-YMAPEVLQN----EVYDFSPDWFSLGCLLYEMIAGHSPF  386 (591)
T ss_pred             ChhheeeccCCCeEeeccceEEecCCCCc--cccccCccc-ccCHHHHcC----CcccCCccHHHHHhHHHHHHcccCch
Confidence            79999999999999999999988877665  333589999 999999998    78999999999999999999999999


Q ss_pred             CCC--CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTW--GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ...  ....+.+.+.....+..+ ++.+|++++++.+.
T Consensus       387 r~~KeKvk~eEvdrr~~~~~~ey-~~kFS~eakslc~~  423 (591)
T KOG0986|consen  387 RQRKEKVKREEVDRRTLEDPEEY-SDKFSEEAKSLCEG  423 (591)
T ss_pred             hhhhhhhhHHHHHHHHhcchhhc-ccccCHHHHHHHHH
Confidence            762  112223444444455566 47899999998753

>PHA02988 hypothetical protein; Provisional

Probab=99.93  E-value=7.9e-25  Score=162.90  Aligned_cols=168  Identities=14%  Similarity=0.225  Sum_probs=118.6

Q ss_pred             hHHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++..+.....  .+...+++++|+..++++.+.+..                 ....++|...  +..|+
T Consensus        70 ~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hr  147 (283)
T PHA02988         70 KNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYK  147 (283)
T ss_pred             HHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCC
Confidence            46778888877654433333  234578899999999888775421                 1124666531  23477


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||++.......    ....++.. |+|||++.+.  ...++.++|+|||||++|+|++|..
T Consensus       148 dlkp~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~-y~aPE~~~~~--~~~~~~k~Di~SlGvil~el~~g~~  220 (283)
T PHA02988        148 NLTSVSFLVTENYKLKIICHGLEKILSSPP----FKNVNFMV-YFSYKMLNDI--FSEYTIKDDIYSLGVVLWEIFTGKI  220 (283)
T ss_pred             cCChhhEEECCCCcEEEcccchHhhhcccc----ccccCccc-ccCHHHhhhc--cccccchhhhhHHHHHHHHHHHCCC
Confidence            888999999999999999999987654322    12456677 9999998641  1467899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+....+.. +..+++ |..+|+++++++++
T Consensus       221 Pf~~-~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~li~~  257 (283)
T PHA02988        221 PFEN-LTTKEIYDLIINKNNSLKL-PLDCPLEIKCIVEA  257 (283)
T ss_pred             CCCC-CCHHHHHHHHHhcCCCCCC-CCcCcHHHHHHHHH
Confidence            9988 345455555543 344445 34578899998753

>KOG0659|consensus

Probab=99.93  E-value=5.8e-26  Score=160.98  Aligned_cols=106  Identities=18%  Similarity=0.188  Sum_probs=87.6

Q ss_pred             HHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC
Q psy17162         44 LETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD  123 (182)
Q Consensus        44 l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~  123 (182)
                      +.++.  |+|..-+.|+|+   ||+|+|++.+|.+||+|||+|+..+.+... .+..+.+.+ |+|||.+.+   ...|+
T Consensus       111 LkGl~--y~H~~~IlHRDl---KPnNLLis~~g~lKiADFGLAr~f~~p~~~-~~~~V~TRW-YRAPELLfG---sr~Yg  180 (318)
T KOG0659|consen  111 LKGLA--YCHSKWILHRDL---KPNNLLISSDGQLKIADFGLARFFGSPNRI-QTHQVVTRW-YRAPELLFG---SRQYG  180 (318)
T ss_pred             HHHHH--HHHhhhhhcccC---CccceEEcCCCcEEeecccchhccCCCCcc-cccceeeee-ccChHHhcc---chhcC
Confidence            45555  777776666555   599999999999999999999988765442 222467888 999999987   36789


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        124 IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      ..+|+||.||++.||+.|.+.|.| +++.+++..|.+
T Consensus       181 ~~VDmWavGCI~AELllr~P~fpG-~sDidQL~~If~  216 (318)
T KOG0659|consen  181 TGVDMWAVGCIFAELLLRVPFFPG-DSDIDQLSKIFR  216 (318)
T ss_pred             CcchhhhHHHHHHHHHccCCCCCC-CchHHHHHHHHH
Confidence            999999999999999999999999 788899988866

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.93  E-value=4.6e-25  Score=167.05  Aligned_cols=161  Identities=16%  Similarity=0.233  Sum_probs=115.0

Q ss_pred             HhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162          7 VFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      .++|+|++.. .+... +...+++++|+..++++...+..                .+..|||+.+++   |+|+||+||
T Consensus        58 ~l~hp~i~~~-~~~~~-~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iv---Hrdlkp~Ni  132 (324)
T cd05589          58 SERHPFLVNL-FACFQ-TEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIV---YRDLKLDNL  132 (324)
T ss_pred             ccCCCChhce-eeEEE-cCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---ecCCCHHHe
Confidence            4457666544 44444 45678999999988887653211                113477777655   555669999


Q ss_pred             EEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q psy17162         71 HQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS  150 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~  150 (182)
                      +++.++.+||+|||++......... ....+|+.. |+|||.+.+    ..++.++|+||+||++|+|++|..||.+ ..
T Consensus       133 ll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~g~~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~G~~pf~~-~~  205 (324)
T cd05589         133 LLDTEGFVKIADFGLCKEGMGFGDR-TSTFCGTPE-FLAPEVLTE----TSYTRAVDWWGLGVLIYEMLVGESPFPG-DD  205 (324)
T ss_pred             EECCCCcEEeCcccCCccCCCCCCc-ccccccCcc-ccCHhHhcC----CCCCcccchhhHHHHHHHHHhCCCCCCC-CC
Confidence            9999999999999988653322211 223678888 999999987    6788999999999999999999999988 45


Q ss_pred             cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        151 PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       151 ~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..+....+..+. +.+ |..+|+++.+++++
T Consensus       206 ~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  234 (324)
T cd05589         206 EEEVFDSIVNDE-VRY-PRFLSREAISIMRR  234 (324)
T ss_pred             HHHHHHHHHhCC-CCC-CCCCCHHHHHHHHH
Confidence            545555555543 444 45678888888763

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0580|consensus

Probab=99.93  E-value=3.5e-26  Score=159.89  Aligned_cols=165  Identities=19%  Similarity=0.200  Sum_probs=125.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH----------------HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL----------------RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~l~~~~~~h~~~~~lk~   67 (182)
                      |-..++|+|++ .++.++. +...+|++.||-..+.++..|...                .+..|.+.|..++.|||+||
T Consensus        75 Iqs~L~hpnil-rlY~~fh-d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKp  152 (281)
T KOG0580|consen   75 IQSHLRHPNIL-RLYGYFH-DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKP  152 (281)
T ss_pred             eecccCCccHH-hhhhhee-ccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCH
Confidence            44557787775 4444444 678899999999888888876411                12344444555555667779


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +|+|++.++.+|++|||-+-....+.   +.+.||+.. |.+||...+    ..++..+|+|++|++.||++.|.+||..
T Consensus       153 enlLlg~~~~lkiAdfGwsV~~p~~k---R~tlcgt~d-yl~pEmv~~----~~hd~~Vd~w~lgvl~yeflvg~ppFes  224 (281)
T KOG0580|consen  153 ENLLLGSAGELKIADFGWSVHAPSNK---RKTLCGTLD-YLPPEMVEG----RGHDKFVDLWSLGVLCYEFLVGLPPFES  224 (281)
T ss_pred             HHhccCCCCCeeccCCCceeecCCCC---ceeeecccc-cCCHhhcCC----CCccchhhHHHHHHHHHHHHhcCCchhh
Confidence            99999999999999999986665333   344899999 999999998    7899999999999999999999999998


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      . ...+....|.. ....+ |..+|.+++|+|.+
T Consensus       225 ~-~~~etYkrI~k-~~~~~-p~~is~~a~dlI~~  255 (281)
T KOG0580|consen  225 Q-SHSETYKRIRK-VDLKF-PSTISGGAADLISR  255 (281)
T ss_pred             h-hhHHHHHHHHH-ccccC-CcccChhHHHHHHH
Confidence            3 44455555544 33556 47799999999863

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.93  E-value=3.8e-25  Score=170.91  Aligned_cols=168  Identities=20%  Similarity=0.216  Sum_probs=116.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|++++. +.+... +...+++++|+..++++.+.+..                 ....|||..++   .|+|+
T Consensus        53 ~il~~l~h~~iv~-l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~gi---vHrDl  127 (381)
T cd05626          53 DILAEADNEWVVK-LYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGF---IHRDI  127 (381)
T ss_pred             HHHHhcCCCCeee-eEEEEe-cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecCC
Confidence            4677788876654 444444 45678899999988887664311                 12347777655   55566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh----------------------------------------------hhccc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI----------------------------------------------IRGLY   99 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~----------------------------------------------~~~~~   99 (182)
                      ||+||+++.++.+||+|||++........                                              .....
T Consensus       128 Kp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (381)
T cd05626         128 KPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHS  207 (381)
T ss_pred             cHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccccccc
Confidence            69999999999999999998753211000                                              00012


Q ss_pred             CCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhh-CCCCCCCC-CCCCHHHHH
Q psy17162        100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ-DDPPRLPP-GEFSSDFKD  177 (182)
Q Consensus       100 ~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~-~~~~~~~~-~~~s~~~~~  177 (182)
                      .+|+.. |+|||++..    ..++.++|+||+||++|+|++|.+||.. ..+.+....+.. .....+|+ ..+|+++++
T Consensus       208 ~~gt~~-Y~aPE~~~~----~~~~~~~DiwSlG~il~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d  281 (381)
T cd05626         208 LVGTPN-YIAPEVLLR----KGYTQLCDWWSVGVILFEMLVGQPPFLA-PTPTETQLKVINWENTLHIPPQVKLSPEAVD  281 (381)
T ss_pred             ccCCcc-ccCHHHHcC----CCCCCccceeehhhHHHHHHhCCCCCcC-CCHHHHHHHHHccccccCCCCCCCCCHHHHH
Confidence            468888 999999987    6788999999999999999999999987 344444444443 22334432 258999999


Q ss_pred             Hhhh
Q psy17162        178 FITL  181 (182)
Q Consensus       178 ~i~~  181 (182)
                      ++.+
T Consensus       282 li~~  285 (381)
T cd05626         282 LITK  285 (381)
T ss_pred             HHHH
Confidence            9864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.93  E-value=3.9e-25  Score=167.20  Aligned_cols=163  Identities=16%  Similarity=0.182  Sum_probs=115.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.+... +...+++++|+..++++.+.+..                 ..+.|||..+++   |+|||
T Consensus        49 ~l~~~~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iv---H~Dlk  123 (321)
T cd05603          49 LLKNLKHPFLVG-LHYSFQ-TAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNII---YRDLK  123 (321)
T ss_pred             HHHhCCCCCccc-eeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---eccCC
Confidence            456778887765 444444 55678899999988877653311                 113477776655   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|++. |+|||++..    ..++.++|+||+||++|+|++|..||.
T Consensus       124 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~pf~  197 (321)
T cd05603         124 PENILLDSQGHVVLTDFGLCKEGVEPEET-TSTFCGTPE-YLAPEVLRK----EPYDRTVDWWCLGAVLYEMLYGLPPFY  197 (321)
T ss_pred             HHHeEECCCCCEEEccCCCCccCCCCCCc-cccccCCcc-cCCHHHhcC----CCCCCcCcccccchhhhhhhcCCCCCC
Confidence            99999999999999999998653322211 222567888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      + .+.......+..+ +..+ +...+.++.+++.
T Consensus       198 ~-~~~~~~~~~i~~~-~~~~-~~~~~~~~~~li~  228 (321)
T cd05603         198 S-RDVSQMYDNILHK-PLQL-PGGKTVAACDLLV  228 (321)
T ss_pred             C-CCHHHHHHHHhcC-CCCC-CCCCCHHHHHHHH
Confidence            8 3443444444443 3445 3456778887765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=4.5e-25  Score=167.45  Aligned_cols=166  Identities=16%  Similarity=0.221  Sum_probs=114.4

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..++++.+.+..                 ....|||+.+++|   +|+
T Consensus        48 il~~~~~hp~Iv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH---~dl  122 (329)
T cd05588          48 VFETASNHPFLV-GLHSCFQ-TESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIY---RDL  122 (329)
T ss_pred             HHHhccCCCCCC-ceEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---cCC
Confidence            44455 455554 4555554 45678999999998887654311                 1234777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++........ ....+|+.. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       123 kp~Nili~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~~l~el~~g~~Pf  196 (329)
T cd05588         123 KLDNVLLDAEGHIKLTDYGMCKEGIRPGDT-TSTFCGTPN-YIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSPF  196 (329)
T ss_pred             CHHHeEECCCCCEEECcCccccccccCCCc-cccccCCcc-ccCHHHHcC----CCCCCccceechHHHHHHHHHCCCCc
Confidence            599999999999999999998653222111 222578888 999999987    67889999999999999999999999


Q ss_pred             CCC-------CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTW-------GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~-------~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ...       ....+...+.+......+ |..+|.++++++++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~li~~  238 (329)
T cd05588         197 DIVGMSDNPDQNTEDYLFQVILEKQIRI-PRSLSVKASSVLKG  238 (329)
T ss_pred             ccccccccccccchHHHHHHHHcCCCCC-CCCCCHHHHHHHHH
Confidence            631       112223333344444556 45688888888764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=3.6e-25  Score=167.70  Aligned_cols=163  Identities=14%  Similarity=0.144  Sum_probs=116.1

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      ++.++|+|++. +.+... +...+++++|+..++++.+.+..                 ....|||+.+++|   +|+||
T Consensus        50 l~~~~h~~Iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiH---rDlkp  124 (325)
T cd05602          50 LKNVKHPFLVG-LHFSFQ-TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVY---RDLKP  124 (325)
T ss_pred             HHhCCCCCCCc-eeEEEE-cCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---cCCCH
Confidence            45677877764 344444 45678899999988887664311                 0124777766554   55669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.+||+|||++......... ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|.+||.+
T Consensus       125 ~Nili~~~~~~kl~DfG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~  198 (325)
T cd05602         125 ENILLDSQGHIVLTDFGLCKENIEHNGT-TSTFCGTPE-YLAPEVLHK----QPYDRTVDWWCLGAVLYEMLYGLPPFYS  198 (325)
T ss_pred             HHeEECCCCCEEEccCCCCcccccCCCC-cccccCCcc-ccCHHHHcC----CCCCCccccccccHHHHHHhcCCCCCCC
Confidence            9999999999999999998654322211 122568888 999999987    7788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                       ....+....+.... ..+ +..+++.+++++++
T Consensus       199 -~~~~~~~~~i~~~~-~~~-~~~~~~~~~~li~~  229 (325)
T cd05602         199 -RNTAEMYDNILNKP-LQL-KPNITNSARHLLEG  229 (325)
T ss_pred             -CCHHHHHHHHHhCC-cCC-CCCCCHHHHHHHHH
Confidence             45545555554443 334 33578888888764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=6.9e-25  Score=165.70  Aligned_cols=165  Identities=15%  Similarity=0.225  Sum_probs=116.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++...++++++.+.+... +...+++++|+..++++...+..                 ....|||+.+++|   +|+|
T Consensus        48 il~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH---~dlk  123 (318)
T cd05570          48 VLALAGKHPFLTQLHSCFQ-TKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIY---RDLK  123 (318)
T ss_pred             HHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEc---cCCC
Confidence            4555544455556666555 45678999999988887654311                 1134788776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+++.. |+|||++.+    ..++.++|+||+||++|+|++|..||.
T Consensus       124 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~g~~~-y~aPE~~~~----~~~~~~~DiwslGvil~~l~~G~~pf~  197 (318)
T cd05570         124 LDNVLLDSEGHIKIADFGMCKEGILGGVT-TSTFCGTPD-YIAPEILSY----QPYGPAVDWWALGVLLYEMLAGQSPFE  197 (318)
T ss_pred             HHHeEECCCCcEEecccCCCeecCcCCCc-ccceecCcc-ccCHHHhcC----CCCCcchhhhhHHHHHHHHhhCCCCCC
Confidence            99999999999999999988653222111 122567778 999999987    788899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + .........+... .+.+ |..+++++++++++
T Consensus       198 ~-~~~~~~~~~i~~~-~~~~-~~~~~~~~~~li~~  229 (318)
T cd05570         198 G-DDEDELFQSILED-EVRY-PRWLSKEAKSILKS  229 (318)
T ss_pred             C-CCHHHHHHHHHcC-CCCC-CCcCCHHHHHHHHH
Confidence            7 3444444444443 3445 45688999998864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0587|consensus

Probab=99.93  E-value=1e-25  Score=180.71  Aligned_cols=172  Identities=23%  Similarity=0.343  Sum_probs=139.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h   59 (182)
                      +|++...++++++.++.+...    .+.++.+|||+|.++++.+.....                   .+++||..+++|
T Consensus        67 nil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviH  146 (953)
T KOG0587|consen   67 NMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIH  146 (953)
T ss_pred             HHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceee
Confidence            588999999999888766643    557788999999999998853221                   234666666555


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC-CCCCccchHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~~~~Diwslg~~l~~l  138 (182)
                      +|   +|..|||++..+.|||+|||.+..+......+.+ ++|++. |||||++.+.... ..|+..+|+||||++..||
T Consensus       147 RD---ikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT-~iGtP~-WMAPEViac~e~~d~tyd~R~D~WsLGITaIEl  221 (953)
T KOG0587|consen  147 RD---IKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNT-FIGTPY-WMAPEVIACDESPDATYDYRSDLWSLGITAIEM  221 (953)
T ss_pred             ec---ccCceEEEeccCcEEEeeeeeeeeeecccccccC-cCCCcc-cccceeeecccCCCCCcccccchhhccceeehh
Confidence            55   4599999999999999999999887665443334 899999 9999999875433 5677889999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      ..|.+|+.+ ..++..+++|.++++|.+. |..||+++-+||.
T Consensus       222 adG~PPl~D-mHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs  263 (953)
T KOG0587|consen  222 AEGAPPLCD-MHPMRALFLIPRNPPPKLKRPKKWSKKFNDFIS  263 (953)
T ss_pred             cCCCCCccC-cchhhhhccCCCCCCccccchhhHHHHHHHHHH
Confidence            999999998 4888999999999989887 7789999999885

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.93  E-value=2.3e-25  Score=168.73  Aligned_cols=164  Identities=13%  Similarity=0.199  Sum_probs=115.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhh-cchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQD-YHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~-~~~~h~~~~~l   65 (182)
                      +++.++|++++. +.+... +...++++||+..++++.+.+..                 ....|||+ .+   +.|+|+
T Consensus        48 ~l~~~~hp~i~~-~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDi  122 (325)
T cd05594          48 VLQNSRHPFLTA-LKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDL  122 (325)
T ss_pred             HHHhCCCCCCCc-eEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCC
Confidence            456677877654 333333 45678999999988887654311                 11247775 44   455666


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... .....|+.. |+|||++..    ..++.++|+||+||++|+|++|..||
T Consensus       123 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~tG~~Pf  196 (325)
T cd05594         123 KLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF  196 (325)
T ss_pred             CCCeEEECCCCCEEEecCCCCeecCCCCcc-cccccCCcc-cCCHHHHcc----CCCCCccccccccceeeeeccCCCCC
Confidence            699999999999999999998653322211 122567888 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .........+..+ ...+ |..+++++++++++
T Consensus       197 ~~-~~~~~~~~~i~~~-~~~~-p~~~~~~~~~li~~  229 (325)
T cd05594         197 YN-QDHEKLFELILME-EIRF-PRTLSPEAKSLLSG  229 (325)
T ss_pred             CC-CCHHHHHHHHhcC-CCCC-CCCCCHHHHHHHHH
Confidence            87 3443444444333 3445 45688899988863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.93  E-value=1.5e-24  Score=161.40  Aligned_cols=166  Identities=15%  Similarity=0.174  Sum_probs=113.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-----------------H--HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-----------------T--LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----------------~--~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|++++. +..... +...+++++++..++++.+.+.                 .  .+..|||+.+++   |+
T Consensus        52 ~il~~l~~~~iv~-~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii---H~  126 (285)
T cd05631          52 RILEKVNSRFVVS-LAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV---YR  126 (285)
T ss_pred             HHHHhcCCCcEEE-EEEEEc-cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE---eC
Confidence            3667777776654 333333 4456889999888877754321                 0  012467766554   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||++........  .....|+.. |+|||++.+    ..++.++|+||+||++|+|++|+.
T Consensus       127 dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~g~~~-y~aPE~~~~----~~~~~~~DvwslGvil~el~~g~~  199 (285)
T cd05631         127 DLKPENILLDDRGHIRISDLGLAVQIPEGET--VRGRVGTVG-YMAPEVINN----EKYTFSPDWWGLGCLIYEMIQGQS  199 (285)
T ss_pred             CCCHHHEEECCCCCEEEeeCCCcEEcCCCCe--ecCCCCCCC-ccCHhhhcC----CCCCcccCchhHHHHHHHHHhCCC
Confidence            5669999999999999999999876543222  222567777 999999987    788899999999999999999999


Q ss_pred             CCCCCCCc--HHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSP--FEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+....  .+............+ +..+|+++++++++
T Consensus       200 pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~li~~  238 (285)
T cd05631         200 PFRKRKERVKREEVDRRVKEDQEEY-SEKFSEDAKSICRM  238 (285)
T ss_pred             CCCCCCcchhHHHHHHHhhcccccC-CccCCHHHHHHHHH
Confidence            99873221  122222223333334 44688889888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.7e-25  Score=169.72  Aligned_cols=168  Identities=17%  Similarity=0.154  Sum_probs=117.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.+... +...+++++|+..++++.+.+..                 .+..|||+.+++|   +|+
T Consensus        53 ~il~~l~hp~iv-~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givH---rDl  127 (377)
T cd05629          53 DVLAESDSPWVV-SLYYSFQ-DAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIH---RDI  127 (377)
T ss_pred             HHHHhCCCCCcc-eEEEEEE-cCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec---cCC
Confidence            466778887765 4444444 45678999999988887664311                 1134777766555   556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh------------h----------------------------------hccc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI------------I----------------------------------RGLY   99 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~------------~----------------------------------~~~~   99 (182)
                      ||+||+++.++.+||+|||+++.......            .                                  ....
T Consensus       128 kp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (377)
T cd05629         128 KPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYS  207 (377)
T ss_pred             CHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence            69999999999999999999853211000            0                                  0001


Q ss_pred             CCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCCC-CCCCHHHHH
Q psy17162        100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLPP-GEFSSDFKD  177 (182)
Q Consensus       100 ~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~-~~~s~~~~~  177 (182)
                      .+|++. |+|||++..    ..++.++|+||+||++|+|++|.+||.+ ....+....+... ....+|. ..+|.++++
T Consensus       208 ~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~d  281 (377)
T cd05629         208 TVGTPD-YIAPEIFLQ----QGYGQECDWWSLGAIMFECLIGWPPFCS-ENSHETYRKIINWRETLYFPDDIHLSVEAED  281 (377)
T ss_pred             cCCCcc-ccCHHHHcc----CCCCCceeeEecchhhhhhhcCCCCCCC-CCHHHHHHHHHccCCccCCCCCCCCCHHHHH
Confidence            457888 999999987    6788999999999999999999999987 4555555555442 2233432 257889999


Q ss_pred             Hhhh
Q psy17162        178 FITL  181 (182)
Q Consensus       178 ~i~~  181 (182)
                      ++++
T Consensus       282 li~~  285 (377)
T cd05629         282 LIRR  285 (377)
T ss_pred             HHHH
Confidence            8864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG1006|consensus

Probab=99.93  E-value=2.5e-26  Score=163.15  Aligned_cols=117  Identities=44%  Similarity=0.686  Sum_probs=99.8

Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      ++.|||+||+|||++..|.+||||||.+..+.++..  .+.-.|+.+ |+|||.+...+  .+|+.++|+||||+++||+
T Consensus       188 kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA--kT~daGCrp-YmAPERi~p~~--~gyDiRSDvWSLGITL~Ev  262 (361)
T KOG1006|consen  188 KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA--KTVDAGCRP-YMAPERIDPSD--KGYDIRSDVWSLGITLYEV  262 (361)
T ss_pred             hhhhccCChhheEEecCCCEeeecccchHhHHHHHH--hhhccCCcc-ccChhccCCcc--CCcchhhhhhhhcceEeee
Confidence            566777779999999999999999999988877665  455678999 99999998643  4689999999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCCCCCCC----CCCHHHHHHhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG----EFSSDFKDFIT  180 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~----~~s~~~~~~i~  180 (182)
                      .||..|+.++.+-.+++.++..|.+|.+-+.    ..|..+..||+
T Consensus       263 AtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fin  308 (361)
T KOG1006|consen  263 ATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFIN  308 (361)
T ss_pred             ecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHH
Confidence            9999999998888899999999988766533    47788888875

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.93  E-value=3.6e-25  Score=169.84  Aligned_cols=168  Identities=19%  Similarity=0.207  Sum_probs=118.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .++..+++++++... +... +...++++||+..++++.+.+..                 ....|||+.+++|   +||
T Consensus        53 ~~l~~l~~~~iv~~~-~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givH---rDL  127 (360)
T cd05627          53 DILVEADGAWVVKMF-YSFQ-DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIH---RDI  127 (360)
T ss_pred             HHHHhCCCCCEeeEE-EEEE-cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc---cCC
Confidence            356667777765443 3333 55678999999988887775321                 1234777766555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh----------------------------------hhcccCCCCCCcccCcc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI----------------------------------IRGLYGADCDPNFIRPE  111 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~----------------------------------~~~~~~~~~~~~~~aPe  111 (182)
                      ||+||+++.++.++|+|||++........                                  ......+|++. |+|||
T Consensus       128 kp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-Y~APE  206 (360)
T cd05627         128 KPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD-YIAPE  206 (360)
T ss_pred             CHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcc-ccCHH
Confidence            69999999999999999999865422100                                  00012467888 99999


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCCCC-CCCHHHHHHhhh
Q psy17162        112 RIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       112 ~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~-~~s~~~~~~i~~  181 (182)
                      ++.+    ..++.++|+||+||++|+|++|.+||.+ ..+.....++... ....+|+. .+|++++++|.+
T Consensus       207 ~~~~----~~~~~~~DiwSlGvilyel~tG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  273 (360)
T cd05627         207 VFMQ----TGYNKLCDWWSLGVIMYEMLIGYPPFCS-ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILR  273 (360)
T ss_pred             HHcC----CCCCCcceeccccceeeecccCCCCCCC-CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHH
Confidence            9987    7888999999999999999999999988 4555555555542 22334333 478999998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0661|consensus

Probab=99.93  E-value=7.7e-26  Score=171.27  Aligned_cols=142  Identities=15%  Similarity=0.188  Sum_probs=109.3

Q ss_pred             HHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHH--------------------HHHHHHHHHHhhcchhccccc
Q psy17162          5 RAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK--------------------ELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         5 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      |+.++ |+|+ +.+.++....+..+++|+|++.. .|+|                    .+.++.  ++|.+++-|||  
T Consensus        62 L~kln~hpni-ikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~--hiHk~GfFHRD--  135 (538)
T KOG0661|consen   62 LRKLNPHPNI-IKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLA--HIHKHGFFHRD--  135 (538)
T ss_pred             HHhcCCCCcc-hhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHH--HHHhcCccccc--
Confidence            44566 5555 45555555455589999998664 3333                    234444  77777665555  


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                       +||+|||+.....+||+|||+|+.......  .+.++.|.+ |+|||++..   .+-|+.+.|+|++||+++|+.+-++
T Consensus       136 -lKPENiLi~~~~~iKiaDFGLARev~SkpP--YTeYVSTRW-YRAPEvLLr---s~~Ys~pvD~wA~GcI~aEl~sLrP  208 (538)
T KOG0661|consen  136 -LKPENILISGNDVIKIADFGLAREVRSKPP--YTEYVSTRW-YRAPEVLLR---SGYYSSPVDMWAVGCIMAELYSLRP  208 (538)
T ss_pred             -CChhheEecccceeEecccccccccccCCC--cchhhhccc-ccchHHhhh---ccccCCchHHHHHHHHHHHHHHhcc
Confidence             559999999999999999999998766555  666889999 999998875   2678999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~  160 (182)
                      .|.| .+..+++.+|..
T Consensus       209 LFPG-~sE~Dqi~KIc~  224 (538)
T KOG0661|consen  209 LFPG-ASEIDQIYKICE  224 (538)
T ss_pred             cCCC-CcHHHHHHHHHH
Confidence            9999 678888888754

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.4e-24  Score=172.58  Aligned_cols=166  Identities=19%  Similarity=0.202  Sum_probs=117.1

Q ss_pred             HHHhCCCCcEEEEEEeeecCC------CceEEEeccCccchHHHHHHH---------------------HHHHHHhhcch
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDD------KKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHL   57 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~   57 (182)
                      +..+.|.|++.....+...+.      ..+++++||..++++.+.+..                     ....|+|..+ 
T Consensus        85 l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-  163 (496)
T PTZ00283         85 LLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-  163 (496)
T ss_pred             HhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-
Confidence            444566666643333322211      135689999998888765421                     0123565554 


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                        +.|+||||+||+++.++.+||+|||+++....... ......+|++. |+|||++..    ..++.++|+||+||++|
T Consensus       164 --IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~-Y~aPE~~~~----~~~s~k~DVwSlGvily  236 (496)
T PTZ00283        164 --MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPY-YVAPEIWRR----KPYSKKADMFSLGVLLY  236 (496)
T ss_pred             --EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcc-eeCHHHhCC----CCCCcHHHHHHHHHHHH
Confidence              55666779999999999999999999876543211 11223678888 999999987    77899999999999999


Q ss_pred             HHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        137 ELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       137 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|++|+.||.+ ....+.+..+..+...++ +..++++++++++
T Consensus       237 eLltG~~Pf~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  278 (496)
T PTZ00283        237 ELLTLKRPFDG-ENMEEVMHKTLAGRYDPL-PPSISPEMQEIVT  278 (496)
T ss_pred             HHHHCCCCCCC-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            99999999988 455566666776665656 4567888888875

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=8.5e-25  Score=165.50  Aligned_cols=164  Identities=15%  Similarity=0.145  Sum_probs=116.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .+... +...+++++|+..++++...+..                 ....|||+.+++|   +|+|
T Consensus        49 ~~~~l~hp~iv~~-~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH---~dik  123 (323)
T cd05575          49 LLKNVKHPFLVGL-HYSFQ-TADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIY---RDLK  123 (323)
T ss_pred             HHhhCCCCCCCCe-eEEEE-eCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---CCCC
Confidence            3456778777643 33333 45678899999988887653311                 1134777776555   5566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|+.. |+|||++..    ..++.++|+||+||++|+|++|..||.
T Consensus       124 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslG~il~ell~g~~pf~  197 (323)
T cd05575         124 PENILLDSQGHVVLTDFGLCKEGIEHSKT-TSTFCGTPE-YLAPEVLRK----QPYDRTVDWWCLGAVLYEMLYGLPPFY  197 (323)
T ss_pred             HHHeEECCCCcEEEeccCCCcccccCCCc-cccccCChh-hcChhhhcC----CCCCccccccccchhhhhhhcCCCCCC
Confidence            99999999999999999998654322211 223567888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+..+. ..++ ..+++.+.+++++
T Consensus       198 ~-~~~~~~~~~i~~~~-~~~~-~~~~~~~~~li~~  229 (323)
T cd05575         198 S-RDTAEMYDNILNKP-LRLK-PNISVSARHLLEG  229 (323)
T ss_pred             C-CCHHHHHHHHHcCC-CCCC-CCCCHHHHHHHHH
Confidence            7 34445455555443 4443 3468888888763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=9.5e-25  Score=167.67  Aligned_cols=168  Identities=18%  Similarity=0.211  Sum_probs=118.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++.+.+..                 .+..|+|+.+++   |+|+
T Consensus        53 ~il~~l~h~~iv~~-~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~iv---H~Dl  127 (364)
T cd05599          53 DILAEADNPWVVKL-YYSFQ-DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYI---HRDI  127 (364)
T ss_pred             HHHHhCCCCCCcce-EEEEE-cCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---eccC
Confidence            46677777776644 44444 46678899999988888765311                 123477777655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh-------------------------------------hcccCCCCCCccc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII-------------------------------------RGLYGADCDPNFI  108 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~-------------------------------------~~~~~~~~~~~~~  108 (182)
                      ||+||+++.++.++|+|||++.........                                     .....+|++. |+
T Consensus       128 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~  206 (364)
T cd05599         128 KPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPD-YI  206 (364)
T ss_pred             CHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCcc-cc
Confidence            699999999999999999988654221100                                     0011457888 99


Q ss_pred             CccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCC-CCCCCCC-CCCHHHHHHhhh
Q psy17162        109 RPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD-PPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       109 aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~-~~s~~~~~~i~~  181 (182)
                      |||++..    ..++.++|+||+||++|+|++|..||.+ ..+.+....+.... ...+|+. .+|++++++|++
T Consensus       207 aPE~~~~----~~~~~~~DiwSlG~il~el~~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  276 (364)
T cd05599         207 APEVFLQ----TGYNKECDWWSLGVIMYEMLVGYPPFCS-DNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKR  276 (364)
T ss_pred             CHHHHcC----CCCCCeeeeecchhHHHHhhcCCCCCCC-CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHH
Confidence            9999987    6788999999999999999999999988 45555555555432 2233322 578999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2e-24  Score=164.04  Aligned_cols=164  Identities=19%  Similarity=0.186  Sum_probs=116.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .++..++|+|++.. .+... +...+++++|+..++++.+.+..                 ....|||+.+++|   +|+
T Consensus        53 ~~l~~~~h~~iv~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH---~dl  127 (333)
T cd05600          53 DILTTTKSEWLVKL-LYAFQ-DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIH---RDL  127 (333)
T ss_pred             HHHHhCCCCCCccE-EEEEE-cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cCC
Confidence            35677777777644 34444 45678999999988887775421                 1124777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......    .....|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       128 kp~Nil~~~~~~~kL~Dfg~a~~~~~~----~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslG~il~ell~g~~pf  198 (333)
T cd05600         128 KPENFLIDASGHIKLTDFGLSKGIVTY----ANSVVGSPD-YMAPEVLRG----KGYDFTVDYWSLGCMLYEFLCGFPPF  198 (333)
T ss_pred             CHHHEEECCCCCEEEEeCcCCcccccc----cCCcccCcc-ccChhHhcC----CCCCCccceecchHHHhhhhhCCCCC
Confidence            599999999999999999998765441    223567888 999999988    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCC----CCCCC--CCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDD----PPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~----~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+....    .+...  ...+|+++++++++
T Consensus       199 ~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~  239 (333)
T cd05600         199 SG-STPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITK  239 (333)
T ss_pred             CC-CCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHH
Confidence            87 44444444443211    11111  11568899998864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.2e-25  Score=167.58  Aligned_cols=161  Identities=17%  Similarity=0.221  Sum_probs=112.3

Q ss_pred             CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcEEE
Q psy17162         10 QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTFHQ   72 (182)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~nil~   72 (182)
                      ++++++.+.+... +...+++++|+..++++.+.+..                 .+..|||+.+++|   +||||+||++
T Consensus        54 ~~p~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivH---rDlkp~Nili  129 (330)
T cd05586          54 ESPFIVGLKFSFQ-TDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVY---RDLKPENILL  129 (330)
T ss_pred             CCCcCcceEEEEe-cCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---ccCCHHHeEE
Confidence            3444445555554 45678899999988877653210                 1134777776555   5555999999


Q ss_pred             cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcH
Q psy17162         73 RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPF  152 (182)
Q Consensus        73 ~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~  152 (182)
                      +.++.++|+|||++......... ....+|+.. |+|||++.+   ...++.++|+||+||++|+|++|..||.+ ....
T Consensus       130 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~---~~~~~~~~DvwslGvil~elltG~~Pf~~-~~~~  203 (330)
T cd05586         130 DATGHIALCDFGLSKANLTDNKT-TNTFCGTTE-YLAPEVLLD---EKGYTKHVDFWSLGVLVFEMCCGWSPFYA-EDTQ  203 (330)
T ss_pred             CCCCCEEEecCCcCcCCCCCCCC-ccCccCCcc-ccCHHHHcC---CCCCCCccceeccccEEEEeccCCCCCCC-CCHH
Confidence            99999999999998654322221 222568888 999999875   13478899999999999999999999987 3444


Q ss_pred             HHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        153 EQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       153 ~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +....+..+. ..++...+++++++++++
T Consensus       204 ~~~~~i~~~~-~~~~~~~~~~~~~~li~~  231 (330)
T cd05586         204 QMYRNIAFGK-VRFPKNVLSDEGRQFVKG  231 (330)
T ss_pred             HHHHHHHcCC-CCCCCccCCHHHHHHHHH
Confidence            4455554443 445555678888888764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.92  E-value=8.4e-25  Score=168.69  Aligned_cols=168  Identities=17%  Similarity=0.159  Sum_probs=115.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|++++.. .+... +...++++||++.++++.+.+..                 ....|||+.+++   |+||
T Consensus        53 ~il~~l~h~~iv~~-~~~~~-~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv---HrDl  127 (376)
T cd05598          53 DILAEADNEWVVKL-YYSFQ-DKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFI---HRDI  127 (376)
T ss_pred             HHHHhCCCCCcceE-EEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---eCCC
Confidence            36777888777644 44444 45678999999988887764311                 113477776655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCch------------------------------------------hhhhcccCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDL------------------------------------------LIIRGLYGADC  103 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~------------------------------------------~~~~~~~~~~~  103 (182)
                      ||+||+++.++.+||+|||++......                                          ........+|+
T Consensus       128 kp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  207 (376)
T cd05598         128 KPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGT  207 (376)
T ss_pred             CHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCC
Confidence            699999999999999999987432100                                          00001124688


Q ss_pred             CCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCC-CCCCCHHHHHHhhh
Q psy17162        104 DPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       104 ~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      +. |+|||++..    ..++.++|+||+||++|+|++|+.||.+ ..+.+....+... ....++ ...+|+++++++.+
T Consensus       208 ~~-y~aPE~~~~----~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  281 (376)
T cd05598         208 PN-YIAPEVLLR----TGYTQLCDWWSVGVILYEMLVGQPPFLA-DTPAETQLKVINWETTLHIPSQAKLSREASDLILR  281 (376)
T ss_pred             cc-ccCHHHHcC----CCCCcceeeeeccceeeehhhCCCCCCC-CCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHH
Confidence            88 999999987    7788999999999999999999999988 3444544444332 222232 23678899888763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.92  E-value=1.7e-24  Score=164.53  Aligned_cols=171  Identities=18%  Similarity=0.242  Sum_probs=117.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++..+.|+++ +.+..... +...+++++||..++++.+.+..                  ....|+|+.+++   |+|+
T Consensus        54 ~l~~~~~~~i-~~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ii---HrDl  128 (332)
T cd05623          54 VLVNGDNQWI-TTLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV---HRDI  128 (332)
T ss_pred             HHhhCCCCCE-eeEEEEEe-cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---ecCC
Confidence            4455556554 44444444 45678899999888888775422                  012467766554   5566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.+||+|||++..............+|+.. |+|||++.... ....++.++|+||+||++|+|++|+.|
T Consensus       129 kp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~P  207 (332)
T cd05623         129 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD-YISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP  207 (332)
T ss_pred             CHHHEEECCCCCEEEeecchheecccCCcceecccccCcc-ccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCC
Confidence            6999999999999999999986543322211222568888 99999986311 014577899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCC-CCCCCC--CCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDD-PPRLPP--GEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~-~~~~~~--~~~s~~~~~~i~~  181 (182)
                      |.+ ....+...++.... ..++|.  ..+|+++++++++
T Consensus       208 f~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~  246 (332)
T cd05623         208 FYA-ESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRR  246 (332)
T ss_pred             CCC-CCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHH
Confidence            988 45556666655432 223332  3578999998864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.92  E-value=4.9e-25  Score=166.45  Aligned_cols=165  Identities=16%  Similarity=0.197  Sum_probs=120.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++.+.+..                 ....|||+.+++|   +|+
T Consensus        50 ~~l~~l~h~niv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H---~dl  124 (318)
T cd05582          50 DILAEVNHPFIVKL-HYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY---RDL  124 (318)
T ss_pred             HHHHhCCCCCcccE-EEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec---CCC
Confidence            36778888887654 44444 45678899999988887664311                 1234777776555   556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... .....|+.. |+|||.+..    ..++.++|+||+||++|+|++|+.||
T Consensus       125 kp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~g~~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~tg~~p~  198 (318)
T cd05582         125 KPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVE-YMAPEVVNR----RGHTQSADWWSFGVLMFEMLTGSLPF  198 (318)
T ss_pred             CHHHeEECCCCcEEEeeccCCcccCCCCCc-eecccCChh-hcCHHHHcC----CCCCCccceeccceEeeeeccCCCCC
Confidence            699999999999999999998765433221 122567778 999999987    67789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ |..+++++++++++
T Consensus       199 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  231 (318)
T cd05582         199 QG-KDRKETMTMILKAK-LGM-PQFLSPEAQSLLRA  231 (318)
T ss_pred             CC-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            87 45555555555543 345 44578888888764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.92  E-value=1.7e-24  Score=164.26  Aligned_cols=161  Identities=17%  Similarity=0.242  Sum_probs=111.0

Q ss_pred             CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcEE
Q psy17162          9 NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      +|+|++ .+.+... +...+++++|+..++++...+..                 ....|||+.+++   |+|+||+||+
T Consensus        54 ~hp~iv-~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iv---H~Dikp~Nil  128 (329)
T cd05618          54 NHPFLV-GLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGII---YRDLKLDNVL  128 (329)
T ss_pred             CCCcCC-ceeeEEE-eCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee---eCCCCHHHEE
Confidence            565555 4455444 45678899999988887654311                 123477777655   5556699999


Q ss_pred             EcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC---
Q psy17162         72 QRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW---  148 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~---  148 (182)
                      ++.++.+||+|||++......... ....+|+.. |+|||++.+    ..++.++|+||+||++|+|++|..||...   
T Consensus       129 i~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~  202 (329)
T cd05618         129 LDSEGHIKLTDYGMCKEGLRPGDT-TSTFCGTPN-YIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS  202 (329)
T ss_pred             ECCCCCEEEeeCCccccccCCCCc-cccccCCcc-ccCHHHHcC----CCCCCccceecccHHHHHHhhCCCCCccCCCc
Confidence            999999999999998653222111 122567888 999999987    67889999999999999999999999521   


Q ss_pred             ----CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        149 ----GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       149 ----~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                          ......+..........+ |..++.++++++++
T Consensus       203 ~~~~~~~~~~~~~~i~~~~~~~-p~~~~~~~~~ll~~  238 (329)
T cd05618         203 DNPDQNTEDYLFQVILEKQIRI-PRSLSVKAASVLKS  238 (329)
T ss_pred             CCcccccHHHHHHHHhcCCCCC-CCCCCHHHHHHHHH
Confidence                112222333333444556 45678888888763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.92  E-value=1.4e-24  Score=164.53  Aligned_cols=164  Identities=16%  Similarity=0.119  Sum_probs=114.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.+... +...+++++|+..++++...+..                 ....|||+.+++|   +|+|
T Consensus        49 ~l~~~~hp~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH---~Dlk  123 (325)
T cd05604          49 LLKNVKHPFLVG-LHYSFQ-TTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVY---RDLK  123 (325)
T ss_pred             HHHhCCCCCCcc-EEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee---cCCC
Confidence            355677877764 444444 45678899999888877654311                 1134777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++......... ....+|+.. |+|||++..    ..++.++|+||+||++|+|++|..||.
T Consensus       124 p~NIll~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslG~il~el~~G~~pf~  197 (325)
T cd05604         124 PENILLDSQGHVVLTDFGLCKEGIAQSDT-TTTFCGTPE-YLAPEVIRK----QPYDNTVDWWCLGAVLYEMLYGLPPFY  197 (325)
T ss_pred             HHHeEECCCCCEEEeecCCcccCCCCCCC-cccccCChh-hCCHHHHcC----CCCCCcCccccccceehhhhcCCCCCC
Confidence            99999999999999999998653222111 222567888 999999987    778899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+..+. ..+++ ..+..+.++++.
T Consensus       198 ~-~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ll~~  229 (325)
T cd05604         198 C-RDVAEMYDNILHKP-LVLRP-GASLTAWSILEE  229 (325)
T ss_pred             C-CCHHHHHHHHHcCC-ccCCC-CCCHHHHHHHHH
Confidence            7 44445555555443 33433 467777777653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0608|consensus

Probab=99.92  E-value=1.7e-24  Score=169.40  Aligned_cols=164  Identities=20%  Similarity=0.198  Sum_probs=113.1

Q ss_pred             CCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------HHHHHHHHhhcchhcccccCCCCCcEEEcCCC
Q psy17162         11 DEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------ETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQF   76 (182)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~   76 (182)
                      .|-|+.++.-++ +...+|.||+|..++++...|              -+.....+.+.|..+..||||||+|||||.+|
T Consensus       688 n~WVVrLyySFQ-DkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG  766 (1034)
T KOG0608|consen  688 NEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG  766 (1034)
T ss_pred             CcceEEEEEEec-cCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC
Confidence            445555554444 677799999999988865532              11222344444555555566669999999999


Q ss_pred             eEEEeccCCCCCCC---------chhhhh--------------------------------cccCCCCCCcccCccccCC
Q psy17162         77 LLHLFRFALSGNQD---------DLLIIR--------------------------------GLYGADCDPNFIRPERIDP  115 (182)
Q Consensus        77 ~~kl~dfg~a~~~~---------~~~~~~--------------------------------~~~~~~~~~~~~aPe~~~~  115 (182)
                      ++||+|||+...+.         .+...+                                ....+|++. |+|||++..
T Consensus       767 HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~n-yiapevl~r  845 (1034)
T KOG0608|consen  767 HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPN-YIAPEVLAR  845 (1034)
T ss_pred             ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCc-ccChHHhcc
Confidence            99999999875421         000000                                011468888 999999998


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhh-CCCCCCCC-CCCCHHHHHHhhh
Q psy17162        116 SGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ-DDPPRLPP-GEFSSDFKDFITL  181 (182)
Q Consensus       116 ~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~-~~~~~~~~-~~~s~~~~~~i~~  181 (182)
                          .+|+..+|+||.|+++|||+.|++||.. ..+.+...+++. .....+++ .++|+++.++|++
T Consensus       846 ----~g~~q~cdwws~gvil~em~~g~~pf~~-~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~k  908 (1034)
T KOG0608|consen  846 ----TGYTQLCDWWSVGVILYEMLVGQPPFLA-DTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQK  908 (1034)
T ss_pred             ----cCccccchhhHhhHHHHHHhhCCCCccC-CCCCcceeeeeehhhccccccccccCHHHHHHHHH
Confidence                7889999999999999999999999988 344444444432 22233443 3799999999875

>KOG0193|consensus

Probab=99.92  E-value=2.6e-25  Score=172.64  Aligned_cols=170  Identities=15%  Similarity=0.191  Sum_probs=122.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~l   65 (182)
                      .++.=+|.|+++   .|.......+.+++..+++.+|+..+.                  +....|||+..|+|+|+|  
T Consensus       441 ~lkkTRH~NIlL---FMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLK--  515 (678)
T KOG0193|consen  441 VLKKTRHENILL---FMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLK--  515 (678)
T ss_pred             HHhhcchhhhee---eehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcc--
Confidence            344455666653   444444444588999999999988541                  112469999998888877  


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                       .+||++.++++|||.|||++..-+.-.. .......|... |+|||++..++. .+|+.++|||||||+.|||++|..|
T Consensus       516 -SnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsil-wmAPEvIRmqd~-nPfS~qSDVYaFGiV~YELltg~lP  592 (678)
T KOG0193|consen  516 -SNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLL-WMAPEVIRMQDD-NPFSFQSDVYAFGIVWYELLTGELP  592 (678)
T ss_pred             -ccceEEccCCcEEEecccceeeeeeeccccccCCCccchh-hhcHHHHhhccc-CCCCcccchhhhhHHHHHHHhCcCC
Confidence             9999999999999999999866432211 00222566777 999999997664 5899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCC---CCCCCCCCHHHHHHh-hhC
Q psy17162        145 YDTWGSPFEQLKQVVQDDPP---RLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~~~~i-~~~  182 (182)
                      |.. ....++++++-+|...   ......+++++++++ .||
T Consensus       593 ysi-~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~  633 (678)
T KOG0193|consen  593 YSI-QNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCW  633 (678)
T ss_pred             cCC-CChhheEEEecccccCccchhhhccCHHHHHHHHHHHH
Confidence            996 6676777777777322   121236777777754 444

>KOG0579|consensus

Probab=99.92  E-value=1.1e-24  Score=170.60  Aligned_cols=125  Identities=25%  Similarity=0.416  Sum_probs=101.7

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCC-CCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPS-GNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~~~~~~~~~Diw  129 (182)
                      |||+..++|+|++   ..|||++.+|.++|+|||.+.........+.+ ++|+++ |||||+..+. ....+|+.++|||
T Consensus       145 ~LHs~~iIHRDLK---AGNiL~TldGdirLADFGVSAKn~~t~qkRDs-FIGTPY-WMAPEVvmCET~KD~PYDykaDiW  219 (1187)
T KOG0579|consen  145 WLHSQNIIHRDLK---AGNILLTLDGDIRLADFGVSAKNKSTRQKRDS-FIGTPY-WMAPEVVMCETFKDQPYDYKADIW  219 (1187)
T ss_pred             HHhhcchhhhhcc---ccceEEEecCcEeeecccccccchhHHhhhcc-ccCCcc-cccchheeeccccCCCchhhhhHH
Confidence            7777777766655   99999999999999999998776555443344 999999 9999987753 1226899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      |||+++.+|.-+.+|.+. -+++..+.+|....||.+- |+.||..+.||+++
T Consensus       220 SlGITLIEMAqiEPPHhe-lnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~  271 (1187)
T KOG0579|consen  220 SLGITLIEMAQIEPPHHE-LNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKR  271 (1187)
T ss_pred             hhhhHHHHHhccCCCccc-cchHHHHHHHhhcCCCcccCcchhhhHHHHHHHH
Confidence            999999999999999998 4677778787766556554 88999999999864

>KOG1026|consensus

Probab=99.92  E-value=2.4e-24  Score=172.63  Aligned_cols=168  Identities=17%  Similarity=0.246  Sum_probs=125.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------------------HHHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------------------RCIYI   52 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------------------~~~~l   52 (182)
                      ++..|.|+|+| .+..+.. .+..+++++||...+||-++|.+-                               ...||
T Consensus       542 Lla~l~H~nIV-rLlGVC~-~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YL  619 (774)
T KOG1026|consen  542 LLAELQHPNIV-RLLGVCR-EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYL  619 (774)
T ss_pred             HHHhccCCCeE-EEEEEEc-cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45667777765 5556666 567789999999999999986321                               23566


Q ss_pred             hhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         53 QDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        53 ~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      .++|+.|   |||..+|+|+.+...|||+|||+++..-.....+.....--+.+||+||.+..    +.|+.++||||+|
T Consensus       620 s~~~FVH---RDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly----~kFTteSDVWs~G  692 (774)
T KOG1026|consen  620 SSHHFVH---RDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY----GKFTTESDVWSFG  692 (774)
T ss_pred             HhCcccc---cchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc----Ccccchhhhhhhh
Confidence            6665555   55559999999999999999999987544433111100111225999999998    8999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh-hhC
Q psy17162        133 ISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       133 ~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i-~~~  182 (182)
                      |++||+++ |..|+.+. ...+.+..|..|..-+- |+.+|+++.+++ .||
T Consensus       693 VvLWEIFsyG~QPy~gl-Sn~EVIe~i~~g~lL~~-Pe~CP~~vY~LM~~CW  742 (774)
T KOG1026|consen  693 VVLWEIFSYGKQPYYGL-SNQEVIECIRAGQLLSC-PENCPTEVYSLMLECW  742 (774)
T ss_pred             hhhhhhhccccCccccc-chHHHHHHHHcCCcccC-CCCCCHHHHHHHHHHh
Confidence            99999998 99999994 56688888877765444 788999988864 455

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.92  E-value=1.2e-23  Score=156.25  Aligned_cols=162  Identities=18%  Similarity=0.209  Sum_probs=111.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-----------------------HHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-----------------------ETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-----------------------~~~~~~~l~~~~~~h~   60 (182)
                      +++.++|++++. +..... +...++++||+..++++...+                       .+  ..|+|+.+++|+
T Consensus        46 il~~l~~~~i~~-~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~--l~~lH~~~i~H~  121 (280)
T cd05608          46 ILAKVHSRFIVS-LAYAFQ-TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG--LEHLHQRRIIYR  121 (280)
T ss_pred             HHHhCCCCcEee-eeEEEc-CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH--HHHHHHCCcccC
Confidence            667777766654 444443 455688999998887765322                       22  347887766555


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                         |+||+||+++.++.++|+|||.+......... .....++.. |+|||.+.+    ..++.++|+||+||++|+|++
T Consensus       122 ---dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~-y~aPE~~~~----~~~~~~~DvwslG~il~el~~  192 (280)
T cd05608         122 ---DLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKGYAGTPG-FMAPELLQG----EEYDFSVDYFALGVTLYEMIA  192 (280)
T ss_pred             ---CCCHHHEEECCCCCEEEeeCccceecCCCCcc-ccccCCCcC-ccCHHHhcC----CCCCccccHHHHHHHHHHHHh
Confidence               55599999999999999999998765443221 122467777 999999988    778899999999999999999


Q ss_pred             CCCCCCCCCCc---HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        141 GRFPYDTWGSP---FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       141 g~~pf~~~~~~---~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+.||......   ......+.. .+..+ +..+|++++++++
T Consensus       193 g~~pf~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~li~  233 (280)
T cd05608         193 ARGPFRARGEKVENKELKQRILN-DSVTY-PDKFSPASKSFCE  233 (280)
T ss_pred             CCCCCCCCCcchhHHHHHHhhcc-cCCCC-cccCCHHHHHHHH
Confidence            99999762221   111222222 22334 3457888888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=5.2e-24  Score=161.75  Aligned_cols=171  Identities=18%  Similarity=0.217  Sum_probs=116.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++..++|++++ .+.+... +...+++++|+..++++.+.+..                  ....|||+.+++   |+|+
T Consensus        54 ~l~~~~~~~i~-~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv---H~dl  128 (331)
T cd05597          54 VLVNGDRRWIT-NLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYV---HRDI  128 (331)
T ss_pred             HHHhCCCCCCC-ceEEEEe-cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---ECCC
Confidence            45556666665 4444444 45678999999888887665421                  112477776655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.+||+|||++...............|++. |+|||++..... ...++.++|+||+||++|+|++|+.|
T Consensus       129 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~P  207 (331)
T cd05597         129 KPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPD-YISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             CHHHEEECCCCCEEEEECCceeecCCCCCccccceecccc-ccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCC
Confidence            6999999999999999999986554332211222457777 999999863110 13467889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhC-CCCCCCC--CCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQD-DPPRLPP--GEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~-~~~~~~~--~~~s~~~~~~i~~  181 (182)
                      |.+ ....+....+... ....+++  ..+|+++++++++
T Consensus       208 f~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~  246 (331)
T cd05597         208 FYA-ESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRR  246 (331)
T ss_pred             CCC-CCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHH
Confidence            987 4554555555432 2223332  2578899998874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.91  E-value=9e-24  Score=166.00  Aligned_cols=143  Identities=21%  Similarity=0.189  Sum_probs=97.9

Q ss_pred             hHHHHhCCCCcEEEEEEeee----c--CCCceEEEeccCccchHHH-----------------------HHHHHHHHHHh
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT----T--DDKKVVLVTGKGEAEKVQK-----------------------ELETLRCIYIQ   53 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~l~~-----------------------~l~~~~~~~l~   53 (182)
                      .+++.++|+|++.....+..    .  ....++++||+.... +.+                       .+.++  .|||
T Consensus       111 ~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL--~yLH  187 (440)
T PTZ00036        111 LIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRAL--AYIH  187 (440)
T ss_pred             HHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH--HHHH
Confidence            47788899888754332211    1  112355888887643 222                       22333  3888


Q ss_pred             hcchhcccccCCCCCcEEEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         54 DYHLCVRSTRYFSVDTFHQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        54 ~~~~~h~~~~~lk~~nil~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      +.+++|   |||||+||+++.++ .+||+|||+++.......  .....+++. |+|||++.+   ...++.++|+||+|
T Consensus       188 ~~~IiH---rDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~--~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwSlG  258 (440)
T PTZ00036        188 SKFICH---RDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR--SVSYICSRF-YRAPELMLG---ATNYTTHIDLWSLG  258 (440)
T ss_pred             HCCEec---CCcCHHHEEEcCCCCceeeeccccchhccCCCC--cccCCCCcC-ccCHHHhcC---CCCCCcHHHHHHHH
Confidence            776555   55559999998765 699999999976543322  222567778 999998865   13688999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcHHHHHHH
Q psy17162        133 ISLIELATGRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       133 ~~l~~l~~g~~pf~~~~~~~~~~~~i  158 (182)
                      |++|+|++|.+||.+ ....+.+..+
T Consensus       259 vil~elltG~~pf~~-~~~~~~~~~i  283 (440)
T PTZ00036        259 CIIAEMILGYPIFSG-QSSVDQLVRI  283 (440)
T ss_pred             HHHHHHHhCCCCCCC-CChHHHHHHH
Confidence            999999999999988 3444555444

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.91  E-value=2.1e-24  Score=163.78  Aligned_cols=172  Identities=18%  Similarity=0.248  Sum_probs=116.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|++++.. .+... +...+++++|+..++++.+.+...                  ...|+|+.++   .|+|
T Consensus        53 ~i~~~~~~~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i---~H~D  127 (330)
T cd05601          53 DILSISNSPWIPQL-QYAFQ-DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY---VHRD  127 (330)
T ss_pred             HHHHhCCCCCCcce-eeEEe-cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---Eccc
Confidence            35666777776543 34433 456688999999888776654211                  1236666655   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC--CCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN--PSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.+||+|||++...............++.. |+|||++.....  ...++.++|+||+||++|+|++|.
T Consensus       128 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~  206 (330)
T cd05601         128 IKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPD-YIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR  206 (330)
T ss_pred             CchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCcc-ccCHHHhccccccccCCCCCcceeecccceeeeeccCC
Confidence            66999999999999999999987654432211222467777 999999863110  145678999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCC-CCCCCC-CCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDD-PPRLPP-GEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~-~~~~~~-~~~s~~~~~~i~~  181 (182)
                      .||.+ ........++.... ...+|. ..+++++++++++
T Consensus       207 ~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  246 (330)
T cd05601         207 SPFHE-GTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQS  246 (330)
T ss_pred             CCCCC-CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHH
Confidence            99987 34545555555432 223332 2578899998864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.91  E-value=1.3e-23  Score=156.70  Aligned_cols=142  Identities=18%  Similarity=0.192  Sum_probs=99.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++ .+.+... +...+++++|+..+ ++.+.+                    .+  .+|||+.+++|+  
T Consensus        55 ~~l~~l~h~niv-~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~a--L~~LH~~~ivH~--  127 (288)
T cd07871          55 SLLKNLKHANIV-TLHDIIH-TERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRG--LSYCHKRKILHR--  127 (288)
T ss_pred             HHHHhCCCCCEe-eEEEEEc-CCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHhCCcccC--
Confidence            367778887765 4555544 45567889988664 444322                    22  347887766555  


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                       |+||+||+++.++.+||+|||++......... .....++.. |+|||++.+   ...++.++|+||+||++|+|++|+
T Consensus       128 -dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~~l~~l~~g~  201 (288)
T cd07871         128 -DLKPQNLLINEKGELKLADFGLARAKSVPTKT-YSNEVVTLW-YRPPDVLLG---STEYSTPIDMWGVGCILYEMATGR  201 (288)
T ss_pred             -CCCHHHEEECCCCCEEECcCcceeeccCCCcc-ccCceeccc-ccChHHhcC---CcccCcHHHHHHHHHHHHHHHhCC
Confidence             55599999999999999999998654332221 122456777 999998864   145788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQV  158 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i  158 (182)
                      +||.+ ....+.+..+
T Consensus       202 ~pf~~-~~~~~~~~~~  216 (288)
T cd07871         202 PMFPG-STVKEELHLI  216 (288)
T ss_pred             CCCCC-CCHHHHHHHH
Confidence            99987 3444444443

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0586|consensus

Probab=99.91  E-value=9e-25  Score=169.73  Aligned_cols=164  Identities=21%  Similarity=0.305  Sum_probs=125.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      .|++.++|+|++..+..+.  +...+|++|||...+.+.+++..-                 +.+|+|+..++|++++  
T Consensus       107 ~imk~l~HPnIvkl~~v~~--t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk--  182 (596)
T KOG0586|consen  107 DIMKSLNHPNIVKLFSVIE--TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLK--  182 (596)
T ss_pred             HHHHhcCCcceeeeeeeee--ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccc--
Confidence            3788899999986555544  466799999999999999976321                 2357777776666655  


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g~~p  144 (182)
                       .+|++++.+-.+||+|||++..+..+..  ..++||+++ |+|||+..+    ..|+ +.+|+||+|+++|.++.|..|
T Consensus       183 -~eNilL~~~mnikIaDfgfS~~~~~~~~--lqt~cgspp-yAaPEl~~g----~~y~gpe~D~Wslgvvly~LV~GsLP  254 (596)
T KOG0586|consen  183 -AENILLDENMNIKIADFGFSTFFDYGLM--LQTFCGSPP-YAAPELFNG----KKYDGPEVDIWSLGVVLYALVEGSLP  254 (596)
T ss_pred             -hhhcccccccceeeeccccceeeccccc--ccccCCCCC-ccChHhhcC----cccCCcceehhhhhhhheeeeecccc
Confidence             9999999999999999999988765433  334899999 999999998    5566 899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ ..-.+.....+.+. ..+ |..+|.++++++++
T Consensus       255 FDG-~~lk~Lr~rvl~gk-~rI-p~~ms~dce~lLrk  288 (596)
T KOG0586|consen  255 FDG-QNLKELRPRVLRGK-YRI-PFYMSCDCEDLLRK  288 (596)
T ss_pred             cCC-cccccccchheeee-ecc-cceeechhHHHHHH
Confidence            998 34434444445543 344 34577777777763

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.91  E-value=2.7e-23  Score=154.11  Aligned_cols=166  Identities=17%  Similarity=0.196  Sum_probs=114.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------------------HHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------------------TLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------------------~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++...+.                   ..+..|+|+.+++|   +
T Consensus        45 ~il~~l~hp~i~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH---~  119 (277)
T cd05607          45 EILEKVNSPFIVNL-AYAFE-SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY---R  119 (277)
T ss_pred             HHHHhcCCCcEEEE-EEEEe-cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEE---c
Confidence            47788888877644 33333 4567889999988777754320                   01234788776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||++........  .....++.. |+|||++..    ..++.++|+||+||++|+|++|..
T Consensus       120 dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~DvwslGv~l~el~~g~~  192 (277)
T cd05607         120 DMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQRAGTNG-YMAPEILKE----EPYSYPVDWFAMGCSIYEMVAGRT  192 (277)
T ss_pred             cCChHhEEEcCCCCEEEeeceeeeecCCCce--eeccCCCCC-ccCHHHHcc----CCCCCchhHHHHHHHHHHHHhCCC
Confidence            5559999999999999999999876544322  122456777 999999987    678899999999999999999999


Q ss_pred             CCCCCCCc---HHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSP---FEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~---~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+....   .+.......+. ..++...+++++++++++
T Consensus       193 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~  232 (277)
T cd05607         193 PFKDHKEKVAKEELKRRTLEDE-VKFEHQNFTEESKDICRL  232 (277)
T ss_pred             CCCCCcchhhHHHHHHHhhccc-cccccccCCHHHHHHHHH
Confidence            99763221   12222223322 233334688999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0667|consensus

Probab=99.91  E-value=2e-24  Score=168.90  Aligned_cols=141  Identities=18%  Similarity=0.207  Sum_probs=104.3

Q ss_pred             hHHHHhC-----CCCcEEEEEEeeecCCCceEEEeccCccchHHHH---------------------HHHHHHHHHhhcc
Q psy17162          3 SIRAVFN-----QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE---------------------LETLRCIYIQDYH   56 (182)
Q Consensus         3 ~il~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------l~~~~~~~l~~~~   56 (182)
                      .||+.++     ...+++.+.+.+. -...+++++|... .+|+++                     +.++.  .||+++
T Consensus       234 ~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~--~L~~l~  309 (586)
T KOG0667|consen  234 RILELLNKHDPDDKYNIVRMLDYFY-FRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALL--FLHELG  309 (586)
T ss_pred             HHHHHHhccCCCCCeeEEEeeeccc-cccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH--HHHhCC
Confidence            3677777     2334566666665 3445667766532 233332                     33444  777777


Q ss_pred             hhcccccCCCCCcEEEcCC--CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQ--FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~--~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +||.|++   |+|||+-..  ..+||+|||.|....+...    +++-+.. |+|||++.+    .+|+.+.|||||||+
T Consensus       310 IIHcDLK---PENILL~~~~r~~vKVIDFGSSc~~~q~vy----tYiQSRf-YRAPEVILG----lpY~~~IDmWSLGCI  377 (586)
T KOG0667|consen  310 IIHCDLK---PENILLKDPKRSRIKVIDFGSSCFESQRVY----TYIQSRF-YRAPEVILG----LPYDTAIDMWSLGCI  377 (586)
T ss_pred             eeeccCC---hhheeeccCCcCceeEEecccccccCCcce----eeeeccc-cccchhhcc----CCCCCccceeehhhh
Confidence            6666655   999999654  4699999999988766543    2556677 999999999    999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        135 LIELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       135 l~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      +.||.+|.+.|.| .+..+++..|+.
T Consensus       378 lAEL~tG~PLfpG-~ne~DQl~~I~e  402 (586)
T KOG0667|consen  378 LAELFTGEPLFPG-DNEYDQLARIIE  402 (586)
T ss_pred             HHhHhcCccccCC-CCHHHHHHHHHH
Confidence            9999999999999 688899888865

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.91  E-value=2.1e-23  Score=160.87  Aligned_cols=121  Identities=17%  Similarity=0.183  Sum_probs=85.1

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++|   +|+||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..++.++|+
T Consensus       226 ~yLH~~giiH---rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv  297 (374)
T cd05106         226 DFLASKNCIH---RDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVK-WMAPESIFD----CVYTVQSDV  297 (374)
T ss_pred             HHHHHCCEEe---ccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccc-eeCHHHhcC----CCCCccccH
Confidence            4777776555   556699999999999999999998765432210 0111223345 999999987    678999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHh-hCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVV-QDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||...... ....... .+..+.. +...|++++++++
T Consensus       298 wSlGvil~ellt~G~~Pf~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l~~li~  349 (374)
T cd05106         298 WSYGILLWEIFSLGKSPYPGILVN-SKFYKMVKRGYQMSR-PDFAPPEIYSIMK  349 (374)
T ss_pred             HHHHHHHHHHHhCCCCCCcccccc-HHHHHHHHcccCccC-CCCCCHHHHHHHH
Confidence            999999999997 99999874333 3333333 3333333 4557888888874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=1.9e-23  Score=173.79  Aligned_cols=171  Identities=18%  Similarity=0.255  Sum_probs=119.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcch----
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHL----   57 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~----   57 (182)
                      .+++.+.|+|++..+..+.......++++|++...++|.+.+..                     .++.|||..+.    
T Consensus        64 ~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~  143 (1021)
T PTZ00266         64 NVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNG  143 (1021)
T ss_pred             HHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            46788999888766655555566778899999988777654321                     12347776441    


Q ss_pred             hcccccCCCCCcEEEcC-----------------CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC
Q psy17162         58 CVRSTRYFSVDTFHQRL-----------------QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS  120 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~-----------------~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~  120 (182)
                      ..+.|+||||+||+++.                 .+.+||+|||++........  .....+++. |+|||++....  .
T Consensus       144 k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~-YmAPEvL~ge~--~  218 (1021)
T PTZ00266        144 ERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPY-YWSPELLLHET--K  218 (1021)
T ss_pred             CCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc--ccccCCCcc-ccCHHHHhccC--C
Confidence            23677888899999964                 23489999999976543322  222567888 99999986411  3


Q ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       121 ~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .++.++|||||||++|+|++|..||... .....+...+... +.++....|+++.+||.
T Consensus       219 ~~s~KSDVWSLG~ILYELLTGk~PF~~~-~~~~qli~~lk~~-p~lpi~~~S~eL~dLI~  276 (1021)
T PTZ00266        219 SYDDKSDMWALGCIIYELCSGKTPFHKA-NNFSQLISELKRG-PDLPIKGKSKELNILIK  276 (1021)
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcC-CcHHHHHHHHhcC-CCCCcCCCCHHHHHHHH
Confidence            5778999999999999999999999873 4444444444332 33444457888888875

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.91  E-value=2.7e-23  Score=153.09  Aligned_cols=169  Identities=17%  Similarity=0.284  Sum_probs=117.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|+|++.....+.......+++++++..+.++.+.+..                 ....+||+.++   .|++++
T Consensus        57 ~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i---~H~~l~  133 (266)
T cd06651          57 LLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI---VHRDIK  133 (266)
T ss_pred             HHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCC
Confidence            6777888887654444444345677889998887776654321                 11247776665   455666


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      |+||+++.++.++|+|||++........  .......++.. |+|||.+.+    ..++.++|+||+||++|++++|+.|
T Consensus       134 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~i~~el~~g~~p  208 (266)
T cd06651         134 GANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPY-WMSPEVISG----EGYGRKADVWSLGCTVVEMLTEKPP  208 (266)
T ss_pred             HHHEEECCCCCEEEccCCCccccccccccCCccccCCcccc-ccCHHHhCC----CCCCchhhhHHHHHHHHHHHHCCCC
Confidence            9999999999999999999865432111  00111345666 999999987    6788999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHh-hCCCCCCCCCCCCHHHHHHhhhC
Q psy17162        145 YDTWGSPFEQLKQVV-QDDPPRLPPGEFSSDFKDFITLW  182 (182)
Q Consensus       145 f~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~~i~~~  182 (182)
                      |... .......+.. ....+.+ +..+++.++++++||
T Consensus       209 f~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~  245 (266)
T cd06651         209 WAEY-EAMAAIFKIATQPTNPQL-PSHISEHARDFLGCI  245 (266)
T ss_pred             cccc-chHHHHHHHhcCCCCCCC-chhcCHHHHHHHHHh
Confidence            9874 3334344333 3333444 456789999999887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=4.4e-24  Score=163.07  Aligned_cols=168  Identities=20%  Similarity=0.215  Sum_probs=116.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .++..++|++++.. .+... +...+++++|+..++++.+.+..                 .+..|||..+++|   +||
T Consensus        53 ~~l~~~~~~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH---~Dl  127 (350)
T cd05573          53 DILADADSPWIVKL-YYSFQ-DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIH---RDI  127 (350)
T ss_pred             HHHHhcCCCCccch-hhhee-cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec---cCC
Confidence            35666777666543 33333 45678899999888877664321                 1234777765555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchh----------------------------hhhcccCCCCCCcccCccccCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLL----------------------------IIRGLYGADCDPNFIRPERIDPSG  117 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~----------------------------~~~~~~~~~~~~~~~aPe~~~~~~  117 (182)
                      ||+||+++.++.+||+|||++.......                            ........|+.. |+|||++..  
T Consensus       128 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~--  204 (350)
T cd05573         128 KPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPD-YIAPEVLRG--  204 (350)
T ss_pred             CHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCcc-ccCHHHHcC--
Confidence            5999999999999999999987654432                            001122567888 999999988  


Q ss_pred             CCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhC-CCCCCC-CCCCCHHHHHHhhh
Q psy17162        118 NPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQD-DPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       118 ~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~-~~~~s~~~~~~i~~  181 (182)
                        ..++.++|+||+||++|+|++|..||.+ .........+... ....+| ...+|++++++|++
T Consensus       205 --~~~~~~~DiwSlG~il~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~  267 (350)
T cd05573         205 --TPYGLECDWWSLGVILYEMLYGFPPFYS-DTLQETYNKIINWKESLRFPPDPPVSPEAIDLICR  267 (350)
T ss_pred             --CCCCCceeeEecchhhhhhccCCCCCCC-CCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHH
Confidence              6788999999999999999999999988 3454555555441 112232 22468899988763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=7.4e-24  Score=160.91  Aligned_cols=171  Identities=18%  Similarity=0.236  Sum_probs=115.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~l   65 (182)
                      ++..+.|+++ +.+.+... +...+++++|+..++++.+.+...                  ...|+|+.+   +.|+|+
T Consensus        54 ~l~~~~~~~i-~~l~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDl  128 (331)
T cd05624          54 VLVNGDCQWI-TTLHYAFQ-DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDI  128 (331)
T ss_pred             HHHhCCCCCE-eeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccC
Confidence            4445556554 44555544 566789999999888877654220                  123556555   455666


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC-CCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.+||+|||++..............+|+.. |+|||++...... ..++.++|+||+|+++|+|++|+.|
T Consensus       129 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~P  207 (331)
T cd05624         129 KPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPD-YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             chHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcc-cCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCC
Confidence            6999999999999999999987654332211222467778 9999988641111 2467889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhC-CCCCCCC--CCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQD-DPPRLPP--GEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~-~~~~~~~--~~~s~~~~~~i~~  181 (182)
                      |.+ ....+....+... ...++|+  ..+|+++++++++
T Consensus       208 f~~-~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~  246 (331)
T cd05624         208 FYA-ESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQR  246 (331)
T ss_pred             ccC-CCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHH
Confidence            987 4555555555543 2233432  2468899998864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.91  E-value=1.5e-23  Score=156.12  Aligned_cols=138  Identities=17%  Similarity=0.191  Sum_probs=98.0

Q ss_pred             hCCCCcEEEEEEeee----cCCCceEEEeccCccchHHHH---------------------HHHHHHHHHhhcchhcccc
Q psy17162          8 FNQDEIGVTVSSVKT----TDDKKVVLVTGKGEAEKVQKE---------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~---------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      +.|+|++. +.++..    .....+++++|+... ++.+.                     +.++  .|||+.+++|   
T Consensus        61 ~~hpniv~-~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL--~~lH~~~iiH---  133 (290)
T cd07862          61 FEHPNVVR-LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGL--DFLHSHRVVH---  133 (290)
T ss_pred             cCCCCcce-EEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHH--HHHHHCCeee---
Confidence            45777664 444432    234567889888653 33332                     2222  4777776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||.+........  .....++.. |+|||++..    ..++.++|+||+||++|+|++|.
T Consensus       134 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~  206 (290)
T cd07862         134 RDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLW-YRAPEVLLQ----SSYATPVDLWSVGCIFAEMFRRK  206 (290)
T ss_pred             CCCCHHHEEEcCCCCEEEccccceEeccCCcc--ccccccccc-ccChHHHhC----CCCCCccchHHHHHHHHHHHcCC
Confidence            55559999999999999999999876543321  222557777 999999987    67889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~  160 (182)
                      +||.+ ....+.+..+..
T Consensus       207 ~~f~~-~~~~~~~~~i~~  223 (290)
T cd07862         207 PLFRG-SSDVDQLGKILD  223 (290)
T ss_pred             CCcCC-CCHHHHHHHHHH
Confidence            99988 455566666543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.91  E-value=4.8e-23  Score=156.44  Aligned_cols=132  Identities=22%  Similarity=0.344  Sum_probs=100.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .+... +...+++++|+..++++.+.+..                 ....|+|+.+  .+.|+|+|
T Consensus        56 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlk  131 (331)
T cd06649          56 VLHECNSPYIVGF-YGAFY-SDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVK  131 (331)
T ss_pred             HHHHCCCCCCCeE-EEEEE-ECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCC
Confidence            5677888777654 44443 45578899999988888765421                 1124666543  24567777


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||++........   ....++.. |+|||++.+    ..++.++|+||+||++|+|++|+.||.
T Consensus       132 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~g~~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~tg~~p~~  203 (331)
T cd06649         132 PSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRS-YMSPERLQG----THYSVQSDIWSMGLSLVELAIGRYPIP  203 (331)
T ss_pred             hhhEEEcCCCcEEEccCccccccccccc---ccCCCCcC-cCCHhHhcC----CCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999876544322   22567777 999999987    678899999999999999999999997


Q ss_pred             C
Q psy17162        147 T  147 (182)
Q Consensus       147 ~  147 (182)
                      .
T Consensus       204 ~  204 (331)
T cd06649         204 P  204 (331)
T ss_pred             C
Confidence            5

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.91  E-value=4.5e-23  Score=154.33  Aligned_cols=164  Identities=15%  Similarity=0.213  Sum_probs=112.0

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      ++..+ .|+|+ +.+.+... +...+++++++...+++.+.+..                                 .+.
T Consensus        55 ~l~~l~~hp~i-v~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  132 (297)
T cd05089          55 VLCKLGHHPNI-INLLGACE-NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGM  132 (297)
T ss_pred             HHHhhcCCCch-hheEEEEc-cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHH
Confidence            45556 45554 45555554 44567888888777776554321                                 123


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .++|+.+++|   +|+||+||+++.++.+||+|||++........  ......+.. |+|||.+..    ..++.++|+|
T Consensus       133 ~~lH~~~ivH---~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Dvw  202 (297)
T cd05089         133 QYLSEKQFIH---RDLAARNVLVGENLASKIADFGLSRGEEVYVK--KTMGRLPVR-WMAIESLNY----SVYTTKSDVW  202 (297)
T ss_pred             HHHHHCCccc---CcCCcceEEECCCCeEEECCcCCCccccceec--cCCCCcCcc-ccCchhhcc----CCCCchhhHH
Confidence            4777766555   55569999999999999999999865332211  111222334 999999887    6788999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||||++|+|++ |..||.+ ....+....+..+..+.. +..+++.+++++.+
T Consensus       203 SlG~il~el~t~g~~pf~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  253 (297)
T cd05089         203 SFGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRMEK-PRNCDDEVYELMRQ  253 (297)
T ss_pred             HHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Confidence            99999999997 9999987 345455555555554444 45688888888753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.91  E-value=4.7e-23  Score=156.91  Aligned_cols=121  Identities=18%  Similarity=0.200  Sum_probs=85.2

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++|   +|+||+||+++.++.++|+|||++......... ......++.. |+|||++..    ..++.++|+
T Consensus       187 ~~lH~~~ivH---rDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  258 (337)
T cd05054         187 EFLASRKCIH---RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WMAPESIFD----KVYTTQSDV  258 (337)
T ss_pred             HHHHhCCeec---CCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc-ccCcHHhcC----CCCCccccH
Confidence            4788776555   555599999999999999999999765432211 1111233445 999999988    788999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||.+. ...+..... ..+..+.. +..+++++.+++.
T Consensus       259 ~SlGv~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  310 (337)
T cd05054         259 WSFGVLLWEIFSLGASPYPGV-QIDEEFCRRLKEGTRMRA-PEYATPEIYSIML  310 (337)
T ss_pred             HHHHHHHHHHHHcCCCCCCCC-CccHHHHHHHhccCCCCC-CccCCHHHHHHHH
Confidence            999999999998 99999873 332333333 33333333 4557778888764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.91  E-value=4.8e-23  Score=151.84  Aligned_cols=167  Identities=18%  Similarity=0.239  Sum_probs=115.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .+... +...++++||+...+++.+.+..                  .+.+|||+.+++|   +|+
T Consensus        59 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH---~di  133 (266)
T cd05064          59 TLGQFDHSNIVRL-EGVIT-RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVH---KGL  133 (266)
T ss_pred             HHhcCCCCCcCeE-EEEEe-cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee---ccc
Confidence            4556778777644 44444 45678899999988887765321                  1234777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      ||+||+++.++.++++|||.+...............++.. |+|||.+..    ..++.++|+||+||++|++++ |..|
T Consensus       134 kp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~ell~~g~~p  208 (266)
T cd05064         134 AAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVL-WAAPEAIQY----HHFSSASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             cHhhEEEcCCCcEEECCCcccccccccchhcccCCCCcee-ecCHHHHhh----CCccchhHHHHHHHHHHHHhcCCCCC
Confidence            5999999999999999999876543322111111223445 999999887    788899999999999999775 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh-hC
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT-LW  182 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~-~~  182 (182)
                      |.+ ....+....+..+..++. +..++..+.+++. ||
T Consensus       209 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~c~  245 (266)
T cd05064         209 YWD-MSGQDVIKAVEDGFRLPA-PRNCPNLLHQLMLDCW  245 (266)
T ss_pred             cCc-CCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHc
Confidence            987 355455555555554444 4567888888774 44

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.5e-23  Score=154.06  Aligned_cols=164  Identities=12%  Similarity=0.134  Sum_probs=113.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|++++.. .+... +...+++++++..++++...+..                   ....|+|+.+++|+   
T Consensus        52 ~~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---  126 (285)
T cd05605          52 QILEKVNSRFVVSL-AYAYE-TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYR---  126 (285)
T ss_pred             HHHHhcCCCCEeee-eeeec-CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEec---
Confidence            36777888777644 33333 34568899999887777543210                   11347887765555   


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||++........  .....++.. |+|||++..    ..++.++|+||+|+++|+|++|..
T Consensus       127 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Diws~G~~l~el~~g~~  199 (285)
T cd05605         127 DLKPENILLDDYGHIRISDLGLAVEIPEGET--IRGRVGTVG-YMAPEVVKN----ERYTFSPDWWGLGCLIYEMIEGKS  199 (285)
T ss_pred             CCCHHHEEECCCCCEEEeeCCCceecCCCCc--cccccCCCC-ccCcHHhcC----CCCCccccchhHHHHHHHHHHCCC
Confidence            5559999999999999999999876543322  122467777 999999987    678899999999999999999999


Q ss_pred             CCCCCCCcHHH---HHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQ---LKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~---~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+. .....   +...+....+.+ +..+++.++++++
T Consensus       200 pf~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  237 (285)
T cd05605         200 PFRQR-KEKVKREEVERRVKEDQEEY-SEKFSEAARSICR  237 (285)
T ss_pred             CCCCC-chhhHHHHHHHHhhhccccc-CcccCHHHHHHHH
Confidence            99873 32222   222233333444 4457888888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.91  E-value=3.4e-23  Score=158.55  Aligned_cols=168  Identities=18%  Similarity=0.305  Sum_probs=111.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH---------------HHHHHHHHHHhhcchhcccccCCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK---------------ELETLRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------~l~~~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++..               .+.++  .|||+.+++|   +||||+
T Consensus       125 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH---rDlkp~  197 (353)
T PLN00034        125 ILRDVNHPNVVK-CHDMFD-HNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGI--AYLHRRHIVH---RDIKPS  197 (353)
T ss_pred             HHHhCCCCCcce-eeeEec-cCCeEEEEEecCCCCcccccccCCHHHHHHHHHHHHHHH--HHHHHCCEee---cCCCHH
Confidence            667788877764 444444 4567889999887765532               22333  4888776555   555599


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      ||+++.++.+||+|||++......... .....|+.. |+|||.+...... ...+.++|||||||++|+|++|+.||..
T Consensus       198 NIll~~~~~~kL~DfG~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  275 (353)
T PLN00034        198 NLLINSAKNVKIADFGVSRILAQTMDP-CNSSVGTIA-YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV  275 (353)
T ss_pred             HEEEcCCCCEEEcccccceeccccccc-ccccccCcc-ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999998765433221 122567778 9999987531111 1234689999999999999999999974


Q ss_pred             CC-Cc-HHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        148 WG-SP-FEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~-~~-~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .. .. ......+.....+.. +..++++++++|++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  310 (353)
T PLN00034        276 GRQGDWASLMCAICMSQPPEA-PATASREFRHFISC  310 (353)
T ss_pred             CCCccHHHHHHHHhccCCCCC-CCccCHHHHHHHHH
Confidence            21 11 122222333333333 45678899998763

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=8.8e-23  Score=149.85  Aligned_cols=166  Identities=17%  Similarity=0.291  Sum_probs=114.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.+... +...+++++++..++.+.+.+..               +  ...+||+.+++   |+|++
T Consensus        57 ~l~~l~~~~i~-~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~---H~dl~  131 (263)
T cd06625          57 LLKNLQHERIV-QYYGCLR-DDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIV---HRDIK  131 (263)
T ss_pred             HHHhCCCCCee-eeEEEEc-cCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCee---cCCCC
Confidence            56778887776 4444444 34578899999888777654321               1  12467766555   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhc--ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRG--LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      |+||+++.++.++|+|||.+...........  ....++.. |+|||.+.+    ..++.++|+||+|+++|++++|+.|
T Consensus       132 p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~g~~p  206 (263)
T cd06625         132 GANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPY-WMSPEVISG----EGYGRKADVWSVGCTVVEMLTEKPP  206 (263)
T ss_pred             HHHEEEcCCCCEEEeecccceeccccccccccccCCCcCcc-ccCcceecc----CCCCchhhhHHHHHHHHHHHhCCCC
Confidence            9999999999999999999865432211001  12345666 999999987    6788999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+. .......++.. ...+.+ +..+++.+++++++
T Consensus       207 ~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  242 (263)
T cd06625         207 WAEF-EAMAAIFKIATQPTNPQL-PSHVSPDARNFLRR  242 (263)
T ss_pred             cccc-chHHHHHHHhccCCCCCC-CccCCHHHHHHHHH
Confidence            9873 44444444433 333444 45678888888753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.91  E-value=6.8e-23  Score=158.13  Aligned_cols=122  Identities=19%  Similarity=0.194  Sum_probs=85.3

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .|+|+||+||+++.++.+||+|||++.......... .....++.. |+|||++..    ..++.++|+
T Consensus       228 ~~lH~~~i---vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDi  299 (375)
T cd05104         228 SFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVK-WMAPESIFN----CVYTFESDV  299 (375)
T ss_pred             HHHHHCCe---eccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcc-eeChhHhcC----CCCCCCCCH
Confidence            47777655   555666999999999999999999987654322110 111223345 999999987    788899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||.+..........+..+..+.. +...++++++++.
T Consensus       300 ~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  351 (375)
T cd05104         300 WSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS-PECAPSEMYDIMK  351 (375)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC-CCCCCHHHHHHHH
Confidence            999999999998 89999874333333333334443333 4556788888775

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0194|consensus

Probab=99.90  E-value=7.1e-24  Score=164.16  Aligned_cols=163  Identities=15%  Similarity=0.267  Sum_probs=122.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +.+.|+|+|++ .++.+.. ....++++||.+.+++|.++|..                  -..+|||+...+|||+-  
T Consensus       214 vMr~l~H~NVV-r~yGVa~-~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIA--  289 (474)
T KOG0194|consen  214 VMRQLNHPNVV-RFYGVAV-LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIA--  289 (474)
T ss_pred             HHHhCCCCCEE-EEEEEEc-CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHh--
Confidence            66778998876 5556655 67789999999999999987622                  12458888877777665  


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                       .+|+|++.++.+||+|||++.....-..  ....+--|.+|+|||.+..    ..|+.++||||+|+++||+++ |..|
T Consensus       290 -ARNcL~~~~~~vKISDFGLs~~~~~~~~--~~~~~klPirWLAPEtl~~----~~~s~kTDV~sfGV~~~Eif~~g~~P  362 (474)
T KOG0194|consen  290 -ARNCLYSKKGVVKISDFGLSRAGSQYVM--KKFLKKLPIRWLAPETLNT----GIFSFKTDVWSFGVLLWEIFENGAEP  362 (474)
T ss_pred             -HHHheecCCCeEEeCccccccCCcceee--ccccccCcceecChhhhcc----CccccccchhheeeeEEeeeccCCCC
Confidence             9999999999999999999866541111  1102223345999999998    899999999999999999998 8899


Q ss_pred             CCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHh
Q psy17162        145 YDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       145 f~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i  179 (182)
                      |.++ ...+...+| ..+.+.+. |...+++++.++
T Consensus       363 y~g~-~~~~v~~kI~~~~~r~~~-~~~~p~~~~~~~  396 (474)
T KOG0194|consen  363 YPGM-KNYEVKAKIVKNGYRMPI-PSKTPKELAKVM  396 (474)
T ss_pred             CCCC-CHHHHHHHHHhcCccCCC-CCCCHHHHHHHH
Confidence            9994 666777777 44665555 455666666554

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.90  E-value=2.6e-23  Score=154.68  Aligned_cols=132  Identities=17%  Similarity=0.152  Sum_probs=97.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.. .+... +...+++++|+...+.+...                   +.+  ..|||+.+++|   +|
T Consensus        53 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~--L~~lH~~~i~H---~d  125 (287)
T cd07848          53 MLRTLKQENIVEL-KEAFR-RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKA--IHWCHKNDIVH---RD  125 (287)
T ss_pred             HHHhCCCccccch-hhhEe-cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHHCCeec---CC
Confidence            5677888877643 33333 45678899998776543321                   122  24777776554   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.+||+|||++...............++.. |+|||++.+    ..++.++|+||+||++|+|++|++|
T Consensus       126 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DiwslGvil~el~~g~~p  200 (287)
T cd07848         126 IKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRW-YRSPELLLG----APYGKAVDMWSVGCILGELSDGQPL  200 (287)
T ss_pred             CCHHHEEEcCCCcEEEeeccCcccccccccccccccccccc-cCCcHHHcC----CCCCCchhHHhHHHHHHHHHhCCCC
Confidence            66999999999999999999987754332211222467777 999999987    6788999999999999999999999


Q ss_pred             CCC
Q psy17162        145 YDT  147 (182)
Q Consensus       145 f~~  147 (182)
                      |.+
T Consensus       201 f~~  203 (287)
T cd07848         201 FPG  203 (287)
T ss_pred             CCC
Confidence            987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.90  E-value=9e-23  Score=149.57  Aligned_cols=166  Identities=17%  Similarity=0.218  Sum_probs=116.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|+|++.. .+...  ....++++++...+++.+.+..                 ..+.++|+.+++   |+|+
T Consensus        48 ~~l~~l~h~~i~~~-~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~---H~dl  121 (257)
T cd05116          48 NVMQQLDNPYIVRM-IGICE--AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFV---HRDL  121 (257)
T ss_pred             HHHHhCCCCCcceE-EEEEc--CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe---eccc
Confidence            36677888877644 34433  4456788898887777654311                 123477777655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||.||+++.++.+||+|||.+..........  .....++.. |+|||.+..    ..++.++|+||+||++|+|++ |+
T Consensus       122 kp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~el~t~g~  196 (257)
T cd05116         122 AARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVK-WYAPECMNY----YKFSSKSDVWSFGVLMWEAFSYGQ  196 (257)
T ss_pred             chhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCcc-ccCHhHhcc----CCcCchhHHHHHHHHHHHHHhCCC
Confidence            6999999999999999999987654332110  111222345 999999876    678889999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+..+..+++ |..+|++++++|++
T Consensus       197 ~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~  233 (257)
T cd05116         197 KPYKG-MKGNEVTQMIESGERMEC-PQRCPPEMYDLMKL  233 (257)
T ss_pred             CCCCC-CCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHH
Confidence            99987 345556666666655555 45689999998863

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG4236|consensus

Probab=99.90  E-value=1.5e-24  Score=166.81  Aligned_cols=162  Identities=18%  Similarity=0.246  Sum_probs=119.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      ||+.+.|+-+ +-+.++.+ +...++.+||..-+..+..+|                    .+++  |||..+   +.|+
T Consensus       616 ILq~l~HPGi-V~le~M~E-T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr--~LH~kn---IvHC  688 (888)
T KOG4236|consen  616 ILQNLHHPGI-VNLECMFE-TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALR--YLHFKN---IVHC  688 (888)
T ss_pred             HHHhcCCCCe-eEEEEeec-CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHH--Hhhhcc---eeec
Confidence            6777777554 56777777 556688888886655555443                    2333  555554   5556


Q ss_pred             CCCCCcEEEcCCC---eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRLQF---LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~~~---~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |+||+|||+....   .+||||||+|+.++....  +...+|++. |+|||+++.    ..|+.+-|+||+|+++|.-++
T Consensus       689 DLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--RrsVVGTPA-YLaPEVLrn----kGyNrSLDMWSVGVIiYVsLS  761 (888)
T KOG4236|consen  689 DLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRSVVGTPA-YLAPEVLRN----KGYNRSLDMWSVGVIIYVSLS  761 (888)
T ss_pred             cCCchheeeccCCCCCceeeccccceeecchhhh--hhhhcCCcc-ccCHHHHhh----ccccccccceeeeEEEEEEec
Confidence            6669999997653   689999999999876543  333789999 999999998    899999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |..||....+--+++++. .-+.|+-|...+|.++-|||+
T Consensus       762 GTFPFNEdEdIndQIQNA-aFMyPp~PW~eis~~AidlIn  800 (888)
T KOG4236|consen  762 GTFPFNEDEDINDQIQNA-AFMYPPNPWSEISPEAIDLIN  800 (888)
T ss_pred             ccccCCCccchhHHhhcc-ccccCCCchhhcCHHHHHHHH
Confidence            999997643333333332 234555656689999999986

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.90  E-value=8.2e-23  Score=149.52  Aligned_cols=167  Identities=15%  Similarity=0.295  Sum_probs=117.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+.....+..+++++++..++++.+.+..                 +  ...++|+.+++|   +
T Consensus        51 ~~l~~l~~~~i~~~-~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H---~  126 (257)
T cd08223          51 QLLSQLKHPNIVAY-RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILH---R  126 (257)
T ss_pred             HHHHhCCCCCeeee-eeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec---c
Confidence            46777888776643 33333345567899999887777664421                 0  124677766555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |++|+||+++.++.++|+|||.+......... .....++.. |+|||++..    ..++.++|+||+|++++++++|+.
T Consensus       127 di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08223         127 DLKTQNVFLTRTNIIKVGDLGIARVLENQCDM-ASTLIGTPY-YMSPELFSN----KPYNYKSDVWALGCCVYEMATLKH  200 (257)
T ss_pred             CCCchhEEEecCCcEEEecccceEEecccCCc-cccccCCcC-ccChhHhcC----CCCCchhhhHHHHHHHHHHHcCCC
Confidence            55599999999999999999998665432221 122456677 999999987    678889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ .........+..+..+.. +..+++++.+++++
T Consensus       201 ~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  236 (257)
T cd08223         201 AFNA-KDMNSLVYRIIEGKLPPM-PKDYSPELGELIAT  236 (257)
T ss_pred             CCCC-CCHHHHHHHHHhcCCCCC-ccccCHHHHHHHHH
Confidence            9987 344444445555554444 45688888888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG4250|consensus

Probab=99.90  E-value=8.1e-24  Score=166.82  Aligned_cols=135  Identities=20%  Similarity=0.274  Sum_probs=100.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC-----CCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcch
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD-----DKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHL   57 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~   57 (182)
                      +|++.++|+|+|..+ ++.+..     ...-+++|||+.++++...+..                    .+..|||++++
T Consensus        63 eilkKLnh~NIVk~f-~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~I  141 (732)
T KOG4250|consen   63 EILKKLNHPNIVKLF-DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGI  141 (732)
T ss_pred             HHHHHcCchhhhhhc-ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            489999988887443 333222     2334589999999999986511                    11236666655


Q ss_pred             hcccccCCCCCcEEEc--CCCe--EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQR--LQFL--LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~--~~~~--~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                      +||   ||||.||++-  .+|+  -||+|||+|+.+.++..  -...+||.. |.+||++..   ...|+..+|.||+||
T Consensus       142 vHR---DlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~--~~S~vGT~~-YLhPel~E~---q~~y~~tVDLWS~Gv  212 (732)
T KOG4250|consen  142 VHR---DLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL--FTSLVGTEE-YLHPELYER---QKKYTATVDLWSFGV  212 (732)
T ss_pred             eec---cCCCCcEEEeecCCCceEEeeecccccccCCCCCe--eeeecCchh-hcChHHHhh---ccCcCceeehhhhhh
Confidence            555   5559999873  3344  39999999999887764  333789999 999999983   167889999999999


Q ss_pred             HHHHHHhCCCCCCC
Q psy17162        134 SLIELATGRFPYDT  147 (182)
Q Consensus       134 ~l~~l~~g~~pf~~  147 (182)
                      ++|+..||..||..
T Consensus       213 tlY~caTG~lPF~p  226 (732)
T KOG4250|consen  213 TLYECATGELPFIP  226 (732)
T ss_pred             HHHHHhccCCCCCc
Confidence            99999999999965

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.90  E-value=8.3e-23  Score=149.33  Aligned_cols=164  Identities=17%  Similarity=0.213  Sum_probs=118.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++..+. ... +....++++|+..++++.+.+...                   ...|+|+.+++|   +|
T Consensus        52 ~l~~l~h~~i~~~~~-~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h---~d  126 (256)
T cd08529          52 VLAKLDSSYIIRYYE-SFL-DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILH---RD  126 (256)
T ss_pred             HHHhcCCCCeehhee-eec-cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc---CC
Confidence            567788888765433 333 456788999998877776643221                   124777765555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|+.|
T Consensus       127 l~~~nili~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p  200 (256)
T cd08529         127 IKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF-ANTIVGTPY-YLSPELCED----KPYNEKSDVWALGVVLYECCTGKHP  200 (256)
T ss_pred             CCcceEEEeCCCCEEEcccccceeccCccch-hhccccCcc-ccCHHHhcC----CCCCCccchHHHHHHHHHHHhCCCC
Confidence            5599999999999999999988765543321 122456777 999999987    6788999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |.. .........+..+..+++ +..++..++++++
T Consensus       201 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  234 (256)
T cd08529         201 FDA-NNQGALILKIIRGVFPPV-SQMYSQQLAQLID  234 (256)
T ss_pred             CCC-CCHHHHHHHHHcCCCCCC-ccccCHHHHHHHH
Confidence            987 345555666666665655 4467788888765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.90  E-value=2.6e-23  Score=159.80  Aligned_cols=143  Identities=15%  Similarity=0.189  Sum_probs=101.5

Q ss_pred             hHHHHhCCCCcEEEEEEeee----cCCCceEEEeccCccchHHH-----------------HHHHHHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT----TDDKKVVLVTGKGEAEKVQK-----------------ELETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~-----------------~l~~~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++..+..+..    .+...+++++|+.... +.+                 .+.++  .|||+.+++|  
T Consensus        75 ~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~aL--~~LH~~~ivH--  149 (364)
T cd07875          75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGI--KHLHSAGIIH--  149 (364)
T ss_pred             HHHHhcCCCCccccceeecccccccccCeEEEEEeCCCCC-HHHHHHhcCCHHHHHHHHHHHHHHH--HHHhhCCeec--
Confidence            36777888887754332222    1224578999987653 222                 22333  3777776555  


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                       +|+||+||+++.++.+||+|||+++.......  .....++.. |+|||++.+    ..++.++|+||+||++|+|++|
T Consensus       150 -~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~----~~~~~~~DiwSlG~il~ell~g  221 (364)
T cd07875         150 -RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMIKG  221 (364)
T ss_pred             -CCCCHHHEEECCCCcEEEEeCCCccccCCCCc--ccCCcccCC-cCCHHHHhC----CCCCchhhHHhHHHHHHHHHhC
Confidence             55559999999999999999999976544322  222567777 999999987    7788999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHh
Q psy17162        142 RFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~  159 (182)
                      +.||.+ .+..+...+++
T Consensus       222 ~~pf~~-~~~~~~~~~~~  238 (364)
T cd07875         222 GVLFPG-TDHIDQWNKVI  238 (364)
T ss_pred             CCCCCC-CCHHHHHHHHH
Confidence            999987 44445554443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0596|consensus

Probab=99.90  E-value=1.8e-23  Score=161.13  Aligned_cols=147  Identities=16%  Similarity=0.243  Sum_probs=103.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      +.|..|+..-.++.++|+.- ++..+|++||+++. +|-++|                    .++.  ++|..++   +|
T Consensus       411 ~lL~KLkg~~~IIqL~DYEv-~d~~lYmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~--~IH~~gI---VH  483 (677)
T KOG0596|consen  411 ALLNKLKGHDKIIQLYDYEV-TDGYLYMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVK--TIHQHGI---VH  483 (677)
T ss_pred             HHHHHhcCCceEEEEeeeec-cCceEEEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHH--HHHHhce---ee
Confidence            36778888888888888877 58889999999664 343332                    2233  5555554   45


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCC-------CCCCccchHHHHHHH
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNP-------SNYDIRSDVWSLGIS  134 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~-------~~~~~~~Diwslg~~  134 (182)
                      .||||-|+|+- +|.+||+|||.|.......+ ......+||.. ||+||.+.+-...       -..++++|||||||+
T Consensus       484 SDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~N-YMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCI  561 (677)
T KOG0596|consen  484 SDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVN-YMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCI  561 (677)
T ss_pred             cCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCccc-ccCHHHHhhccccccCCCcceeecCccchhhhhhH
Confidence            55669999875 68899999999987654432 11233789999 9999998752111       114478999999999


Q ss_pred             HHHHHhCCCCCCCCCCcHHHHHHH
Q psy17162        135 LIELATGRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       135 l~~l~~g~~pf~~~~~~~~~~~~i  158 (182)
                      +|+|+.|++||.........+..|
T Consensus       562 LYqMvYgktPf~~~~n~~aKl~aI  585 (677)
T KOG0596|consen  562 LYQMVYGKTPFGQIINQIAKLHAI  585 (677)
T ss_pred             HHHHHhcCCchHHHHHHHHHHHhh
Confidence            999999999997633333333333

>KOG0690|consensus

Probab=99.90  E-value=2.7e-23  Score=151.82  Aligned_cols=142  Identities=15%  Similarity=0.339  Sum_probs=107.5

Q ss_pred             CCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccC
Q psy17162         24 DDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFA   84 (182)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg   84 (182)
                      +...+..+|+|..++.+.-.                   +.++.  |||+.++   +.||+|.+|++++.+|++||+|||
T Consensus       239 t~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~--YLHs~~i---vYRDlKLENLlLDkDGHIKitDFG  313 (516)
T KOG0690|consen  239 TQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALG--YLHSRNI---VYRDLKLENLLLDKDGHIKITDFG  313 (516)
T ss_pred             cCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhh--hhhhCCe---eeeechhhhheeccCCceEeeecc
Confidence            45557778888777765432                   23333  7777654   455566999999999999999999


Q ss_pred             CCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHH-HhhCCC
Q psy17162         85 LSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQ-VVQDDP  163 (182)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~-i~~~~~  163 (182)
                      +.+..-..... ..++||++- |+|||++..    ..|+.++|+|.+|++.|||++|..||.+  .+.+.++. |+.+. 
T Consensus       314 LCKE~I~~g~t-~kTFCGTPE-YLAPEVleD----nDYgraVDWWG~GVVMYEMmCGRLPFyn--~dh~kLFeLIl~ed-  384 (516)
T KOG0690|consen  314 LCKEEIKYGDT-TKTFCGTPE-YLAPEVLED----NDYGRAVDWWGVGVVMYEMMCGRLPFYN--KDHEKLFELILMED-  384 (516)
T ss_pred             cchhcccccce-eccccCChh-hcCchhhcc----ccccceeehhhhhHHHHHHHhccCcccc--cchhHHHHHHHhhh-
Confidence            98764322222 344999999 999999998    7899999999999999999999999987  44455554 44444 


Q ss_pred             CCCCCCCCCHHHHHHhh
Q psy17162        164 PRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       164 ~~~~~~~~s~~~~~~i~  180 (182)
                      ..| |..+|++++.++.
T Consensus       385 ~kF-Pr~ls~eAktLLs  400 (516)
T KOG0690|consen  385 LKF-PRTLSPEAKTLLS  400 (516)
T ss_pred             ccC-CccCCHHHHHHHH
Confidence            567 6789999998764

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=8.9e-23  Score=153.10  Aligned_cols=142  Identities=15%  Similarity=0.157  Sum_probs=98.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++. +.++.. +...+++++|+... ++.+.                    +.++  .|+|+.+++|   
T Consensus        55 ~~l~~l~h~niv~-~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al--~~lH~~~ivH---  126 (303)
T cd07869          55 SLLKGLKHANIVL-LHDIIH-TKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGL--SYIHQRYILH---  126 (303)
T ss_pred             HHHhhCCCCCcCe-EEEEEe-cCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH--HHHHHCCeec---
Confidence            3677888888764 444444 44568899988753 33332                    2233  4788776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||++......... .....++.. |+|||++.+   ...++.++|+||+||++|+|++|.
T Consensus       127 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~l~~g~  201 (303)
T cd07869         127 RDLKPQNLLISDTGELKLADFGLARAKSVPSHT-YSNEVVTLW-YRPPDVLLG---STEYSTCLDMWGVGCIFVEMIQGV  201 (303)
T ss_pred             CCCCHHHEEECCCCCEEECCCCcceeccCCCcc-CCCCcccCC-CCChHHHcC---CCCCCcHHHHHHHHHHHHHHHhCC
Confidence            555699999999999999999998654322211 122456777 999998865   135778899999999999999999


Q ss_pred             CCCCCCCCcHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQ  157 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~  157 (182)
                      .||.+..+..+.+..
T Consensus       202 ~pf~~~~~~~~~~~~  216 (303)
T cd07869         202 AAFPGMKDIQDQLER  216 (303)
T ss_pred             CCCCCCccHHHHHHH
Confidence            999874444344433

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.90  E-value=2.1e-22  Score=149.59  Aligned_cols=166  Identities=17%  Similarity=0.160  Sum_probs=114.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH--------------------------------H--HH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE--------------------------------T--LR   48 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------------------------------~--~~   48 (182)
                      .+++.+.|+|++.. .+... +....++++|+...+++.+++.                                .  ..
T Consensus        59 ~~l~~l~h~niv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a  136 (283)
T cd05090          59 SLMAELHHPNIVCL-LGVVT-QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG  136 (283)
T ss_pred             HHHhhCCCCCeeeE-EEEEe-cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            36777888777644 44433 3456788999887776655431                                0  11


Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccch
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSD  127 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~D  127 (182)
                      ..|+|+.+++|   +|+||+||+++.++.+||+|||+++........ ......++.. |+|||.+.+    ..++.++|
T Consensus       137 l~~lH~~~i~H---~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~D  208 (283)
T cd05090         137 MEYLSSHFFVH---KDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIR-WMPPEAIMY----GKFSSDSD  208 (283)
T ss_pred             HHHHHhcCeeh---hccccceEEEcCCCcEEeccccccccccCCcceecccCCCccce-ecChHHhcc----CCCCchhh
Confidence            34777776555   555599999999999999999998765432211 0111334445 999999887    67889999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        128 VWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       128 iwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||+|+++|+|++ |..||.+ ..+......+.....++. +..+++++++++.
T Consensus       209 v~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  260 (283)
T cd05090         209 IWSFGVVLWEIFSFGLQPYYG-FSNQEVIEMVRKRQLLPC-SEDCPPRMYSLMT  260 (283)
T ss_pred             hHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            9999999999998 9999987 344455555544444444 4567888888775

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=1.9e-22  Score=149.74  Aligned_cols=165  Identities=16%  Similarity=0.170  Sum_probs=115.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRCI   50 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~~   50 (182)
                      +++.+.|++++..+ .... +....++++|+...+++.+++..                                 ....
T Consensus        61 ~l~~l~h~~i~~~~-~~~~-~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~  138 (283)
T cd05048          61 LMSDLQHPNIVCLL-GVCT-KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGME  138 (283)
T ss_pred             HHHhcCCcccceEE-EEEc-CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHH
Confidence            56667787776544 3333 45567888998877776554321                                 0124


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |||+.++   .|+|+||+||+++.++.++|+|||++........ .......++.. |+|||.+..    ..++.++|+|
T Consensus       139 ~lH~~~i---~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDv~  210 (283)
T cd05048         139 YLSSHHF---VHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVR-WMPPEAILY----GKFTTESDIW  210 (283)
T ss_pred             HHHhCCe---eccccccceEEEcCCCcEEECCCcceeeccccccccccCCCccccc-ccCHHHhcc----CcCchhhhHH
Confidence            6777665   4555669999999999999999999865432211 01122344556 999999887    6788999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+||++|+|++ |..||.+ ....+....+..+..++. +..+|+++.+++.
T Consensus       211 slG~il~el~~~g~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~~  260 (283)
T cd05048         211 SFGVVLWEIFSYGLQPYYG-FSNQEVIEMIRSRQLLPC-PEDCPARVYALMI  260 (283)
T ss_pred             HHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCcCCC-cccCCHHHHHHHH
Confidence            99999999998 9999988 355555555556655555 4568888888875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0196|consensus

Probab=99.90  E-value=3.1e-24  Score=170.77  Aligned_cols=169  Identities=22%  Similarity=0.271  Sum_probs=127.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH----------------HHH--HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL----------------ETL--RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----------------~~~--~~~~l~~~~~~h~~~~~   64 (182)
                      +|+=.|.|+|++ .+..+.+ ..+.+++++||++++.|-.+|                .++  ...||.+.+..|+|+- 
T Consensus       682 sIMGQFdHPNII-rLEGVVT-ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLA-  758 (996)
T KOG0196|consen  682 SIMGQFDHPNII-RLEGVVT-KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLA-  758 (996)
T ss_pred             hhcccCCCCcEE-EEEEEEe-cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhh-
Confidence            467788888876 5666666 567788999999999987765                222  2468888887775555 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCC-CcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCD-PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~-~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                        ..|||++.+..+|++|||+++.+.+......++.-|.. .+|+|||.+..    ..++.++|+||+|+++||+++ |.
T Consensus       759 --ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~----RKFTsASDVWSyGIVmWEVmSyGE  832 (996)
T KOG0196|consen  759 --ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY----RKFTSASDVWSYGIVMWEVMSYGE  832 (996)
T ss_pred             --hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh----cccCchhhccccceEEEEecccCC
Confidence              99999999999999999999987654432222122222 26999999998    899999999999999999876 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHH-HhhhC
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKD-FITLW  182 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~-~i~~~  182 (182)
                      -|+-++ ...+.++.|..|.+.|.|. .+|..+.. +++||
T Consensus       833 RPYWdm-SNQdVIkaIe~gyRLPpPm-DCP~aL~qLMldCW  871 (996)
T KOG0196|consen  833 RPYWDM-SNQDVIKAIEQGYRLPPPM-DCPAALYQLMLDCW  871 (996)
T ss_pred             Cccccc-chHHHHHHHHhccCCCCCC-CCcHHHHHHHHHHH
Confidence            999985 5668888888887655543 46655554 56677

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.90  E-value=9.1e-23  Score=156.51  Aligned_cols=132  Identities=17%  Similarity=0.180  Sum_probs=95.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecC----CCceEEEeccCccchHH----------------HHHHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQ----------------KELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~----------------~~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++..+..+....    ...+++++++.......                +.+.++  .|||+.+++|+   
T Consensus        73 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L--~~LH~~~ivHr---  147 (359)
T cd07876          73 LLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI--KHLHSAGIIHR---  147 (359)
T ss_pred             HHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHH--HHHHhCCcccC---
Confidence            567788887765443332211    23578899887653221                122333  37877765555   


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||++........  .....++.. |+|||++.+    ..++.++|+||+||++|+|++|+.
T Consensus       148 Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~----~~~~~~~DiwSlG~il~el~tg~~  220 (359)
T cd07876         148 DLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGELVKGSV  220 (359)
T ss_pred             CCCHHHEEECCCCCEEEecCCCccccccCcc--CCCCcccCC-CCCchhccC----CCCCcchhhHHHHHHHHHHHhCCC
Confidence            5559999999999999999999876433322  222567777 999999987    788899999999999999999999


Q ss_pred             CCCC
Q psy17162        144 PYDT  147 (182)
Q Consensus       144 pf~~  147 (182)
                      ||.+
T Consensus       221 pf~~  224 (359)
T cd07876         221 IFQG  224 (359)
T ss_pred             CCCC
Confidence            9987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.90  E-value=1.7e-22  Score=153.63  Aligned_cols=133  Identities=21%  Similarity=0.339  Sum_probs=99.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .+... +...+++++|+..+++|.+.+..                 ....|+|+.+  ++.|+|+
T Consensus        55 ~~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dl  130 (333)
T cd06650          55 QVLHECNSPYIVGF-YGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDV  130 (333)
T ss_pred             HHHHHCCCCcccce-eEEEE-ECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCC
Confidence            35677888776644 44444 35678899999988888775421                 1124666532  3556777


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++........   ....++.. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       131 kp~Nili~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~il~~l~~g~~p~  202 (333)
T cd06650         131 KPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRS-YMSPERLQG----THYSVQSDIWSMGLSLVEMAIGRYPI  202 (333)
T ss_pred             ChhhEEEcCCCCEEEeeCCcchhhhhhcc---ccCCCCcc-ccCHHHhcC----CCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            79999999999999999999865533221   22567777 999999987    67889999999999999999999999


Q ss_pred             CC
Q psy17162        146 DT  147 (182)
Q Consensus       146 ~~  147 (182)
                      ..
T Consensus       203 ~~  204 (333)
T cd06650         203 PP  204 (333)
T ss_pred             CC
Confidence            75

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=1.5e-22  Score=148.84  Aligned_cols=167  Identities=16%  Similarity=0.168  Sum_probs=115.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+.|++++... .... .+..+++++++...+++.+.+..                   ....+||..+++|   +
T Consensus        54 ~~l~~l~h~~i~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H---~  128 (263)
T cd05052          54 AVMKEIKHPNLVQLL-GVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH---R  128 (263)
T ss_pred             HHHHhCCCCChhheE-EEEc-CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee---c
Confidence            366778887776444 3333 45567888988777776654311                   0124777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+||+|||.+................+.. |+|||.+..    ..++.++|+|||||++|+|++ |.
T Consensus       129 dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~el~t~g~  203 (263)
T cd05052         129 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAY----NKFSIKSDVWAFGVLLWEIATYGM  203 (263)
T ss_pred             ccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccc-cCCHHHhcc----CCCCchhHHHHHHHHHHHHHcCCC
Confidence            566999999999999999999987755432211111122345 999999887    678899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+..+..+.. +..+|+++++++.+
T Consensus       204 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  240 (263)
T cd05052         204 SPYPG-IDLSQVYELLEKGYRMER-PEGCPPKVYELMRA  240 (263)
T ss_pred             CCCCC-CCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHH
Confidence            99987 344444455555555555 45678888888753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.90  E-value=2.5e-22  Score=147.41  Aligned_cols=165  Identities=20%  Similarity=0.222  Sum_probs=115.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++..+ +...  ....++++|+..++++.+.+..                  ....++|+.++   .|+|
T Consensus        47 ~~l~~l~h~~ii~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~d  120 (257)
T cd05115          47 EIMHQLDNPYIVRMI-GVCE--AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF---VHRD  120 (257)
T ss_pred             HHHHhcCCCCeEEEE-EEEc--CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe---eecc
Confidence            367778888776543 3433  3457889998888877765421                  11347777655   5556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      +||+||+++.++.+||+|||.+..........  .....++.. |+|||.+..    ..++.++|+||||+++|++++ |
T Consensus       121 lkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~g  195 (257)
T cd05115         121 LAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLK-WYAPECINF----RKFSSRSDVWSYGITMWEAFSYG  195 (257)
T ss_pred             cchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcc-cCCHHHHcc----CCCCchhhHHHHHHHHHHHhcCC
Confidence            66999999999999999999987544322110  111112345 999999876    678889999999999999996 9


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +.||.+ ....+....+..+..+.+ +...++++++++.
T Consensus       196 ~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  232 (257)
T cd05115         196 QKPYKK-MKGPEVMSFIEQGKRLDC-PAECPPEMYALMK  232 (257)
T ss_pred             CCCcCc-CCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHH
Confidence            999987 355555555666665555 4557888888765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.90  E-value=1.9e-22  Score=148.11  Aligned_cols=166  Identities=18%  Similarity=0.239  Sum_probs=114.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+... +....++++++..++++.+.+..                   ....|||..+++   |+
T Consensus        53 ~~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~---H~  127 (261)
T cd05072          53 NLMKTLQHDKLVRL-YAVVT-KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI---HR  127 (261)
T ss_pred             HHHHhCCCCCeeeE-EEEEc-CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee---cc
Confidence            46777888777644 44443 45667899999887777654321                   112477776655   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+...............++.. |+|||.+..    ..++.++|+||+|+++|+|++ |.
T Consensus       128 dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~l~t~g~  202 (261)
T cd05072         128 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINF----GSFTIKSDVWSFGILLYEIVTYGK  202 (261)
T ss_pred             ccchhhEEecCCCcEEECCCccceecCCCceeccCCCcccee-cCCHHHhcc----CCCChhhhhhhhHHHHHHHHccCC
Confidence            566999999999999999999997654432211111233445 999999887    678889999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ .........+..+...+. +..++.++.++++
T Consensus       203 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  238 (261)
T cd05072         203 IPYPG-MSNSDVMSALQRGYRMPR-MENCPDELYDIMK  238 (261)
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99987 344455555544443333 3457888888765

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.90  E-value=3.5e-22  Score=146.33  Aligned_cols=166  Identities=17%  Similarity=0.186  Sum_probs=115.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++. +.+... +...+++++++..++++.+.+..                  .+..|+|..+++|   +|
T Consensus        51 ~~l~~l~h~~i~~-~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~d  125 (256)
T cd05114          51 KVMMKLSHPKLVQ-LYGVCT-QQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH---RD  125 (256)
T ss_pred             HHHHHCCCCCcee-EEEEEc-cCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc---cc
Confidence            3677788877664 444444 45668899999887777664321                  1134777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ++|+||+++.++.++++|||.+...............++.. |+|||.+..    ..++.++|+||+|+++|++++ |++
T Consensus       126 l~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~s~G~~l~el~~~g~~  200 (256)
T cd05114         126 LAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVK-WSPPEVFNF----SKYSSKSDVWSFGVLMWEVFTEGKM  200 (256)
T ss_pred             cCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchh-hCChhhccc----CccchhhhhHHHHHHHHHHHcCCCC
Confidence            55999999999999999999887654332211111223345 999999887    678899999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. ....+....+..+..+.. |...+.++.+++.
T Consensus       201 p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~  235 (256)
T cd05114         201 PFEK-KSNYEVVEMISRGFRLYR-PKLASMTVYEVMY  235 (256)
T ss_pred             CCCC-CCHHHHHHHHHCCCCCCC-CCCCCHHHHHHHH
Confidence            9987 455566666666654444 4556777777664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.4e-22  Score=147.88  Aligned_cols=168  Identities=16%  Similarity=0.278  Sum_probs=117.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|++++..+..+.......+++++++..+.++.+.+..                 ....+||+.+++|   +|++
T Consensus        57 ~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H---~dl~  133 (264)
T cd06653          57 LLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVH---RDIK  133 (264)
T ss_pred             HHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEec---CCCC
Confidence            6677888887755555444445667888888877766554311                 1124777766555   5566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      |+||+++.++.++|+|||.+........  .......++.. |+|||.+.+    ..++.++|+||+|+++|++++|+.|
T Consensus       134 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p  208 (264)
T cd06653         134 GANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPY-WMSPEVISG----EGYGRKADVWSVACTVVEMLTEKPP  208 (264)
T ss_pred             HHHEEEcCCCCEEECccccccccccccccCccccccCCccc-ccCHhhhcC----CCCCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999876432110  00112456667 999999887    6678899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |... .......++.. ...+.+ |..+++++++++++
T Consensus       209 ~~~~-~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~i~~  244 (264)
T cd06653         209 WAEY-EAMAAIFKIATQPTKPML-PDGVSDACRDFLKQ  244 (264)
T ss_pred             CCcc-CHHHHHHHHHcCCCCCCC-CcccCHHHHHHHHH
Confidence            9874 44444444443 333444 56788999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.90  E-value=9e-23  Score=149.30  Aligned_cols=164  Identities=18%  Similarity=0.220  Sum_probs=117.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.. .+... +...+++++++...+++.+.+..                 +  ...++|+.++.|   +|
T Consensus        51 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H---~d  125 (255)
T cd08219          51 LLAKMKHPNIVAF-KESFE-ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLH---RD  125 (255)
T ss_pred             HHHhCCCCCcceE-EEEEE-ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCccc---CC
Confidence            5677888776544 44443 45678899999877766553210                 1  124777766555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.++++|||.+......... .....++.. |+|||++.+    ..++.++|+||+|+++|+|++|..|
T Consensus       126 l~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~----~~~~~~~Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         126 IKSKNIFLTQNGKVKLGDFGSARLLTSPGAY-ACTYVGTPY-YVPPEIWEN----MPYNNKSDIWSLGCILYELCTLKHP  199 (255)
T ss_pred             CCcceEEECCCCcEEEcccCcceeecccccc-cccccCCcc-ccCHHHHcc----CCcCchhhhhhhchhheehhhccCC
Confidence            5699999999999999999998665433221 122456677 999999987    6788999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |.. .........+..+..+++ +..++..++++++
T Consensus       200 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  233 (255)
T cd08219         200 FQA-NSWKNLILKVCQGSYKPL-PSHYSYELRSLIK  233 (255)
T ss_pred             CCC-CCHHHHHHHHhcCCCCCC-CcccCHHHHHHHH
Confidence            987 455455555656655555 4568888888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.90  E-value=2.2e-22  Score=148.12  Aligned_cols=168  Identities=14%  Similarity=0.264  Sum_probs=114.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|+|++.............+++++++..++++.+++..                 ....++|+.++   .|+|++
T Consensus        57 ~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~  133 (265)
T cd06652          57 LLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMI---VHRDIK  133 (265)
T ss_pred             HHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCC
Confidence            6777888877654443333334567789999888887765421                 11246776654   555666


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      |+||+++.++.++|+|||.+.........  ......++.. |+|||++..    ..++.++|+||+|+++|++++|+.|
T Consensus       134 p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g~~p  208 (265)
T cd06652         134 GANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPY-WMSPEVISG----EGYGRKADIWSVGCTVVEMLTEKPP  208 (265)
T ss_pred             HHHEEecCCCCEEECcCccccccccccccccccccCCCCcc-ccChhhhcC----CCCCcchhHHHHHHHHHHHhhCCCC
Confidence            99999999999999999988754321110  0112346667 999999877    6778999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhC-CCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQD-DPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |... ............ ..+.+ |...+..+.+++++
T Consensus       209 ~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~  244 (265)
T cd06652         209 WAEF-EAMAAIFKIATQPTNPVL-PPHVSDHCRDFLKR  244 (265)
T ss_pred             CCcc-chHHHHHHHhcCCCCCCC-chhhCHHHHHHHHH
Confidence            9873 333444443332 22333 44577888887753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.90  E-value=2.7e-22  Score=146.92  Aligned_cols=163  Identities=17%  Similarity=0.220  Sum_probs=114.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+.|++++.. .+....+...+++++|+..++++.+.+..                   ....++|+.+++|   +
T Consensus        51 ~~l~~l~~~~i~~~-~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~  126 (256)
T cd05082          51 SVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVH---R  126 (256)
T ss_pred             HHHHhCCCCCeeeE-EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEec---c
Confidence            36677888776644 44333355668899999887777664321                   1134777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+||+|||++........    ....+.. |+|||....    ..++.++|+||+||++|+|++ |.
T Consensus       127 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~i~~~l~~~g~  197 (256)
T cd05082         127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TGKLPVK-WTAPEALRE----KKFSTKSDVWSFGILLWEIYSFGR  197 (256)
T ss_pred             ccchheEEEcCCCcEEecCCccceeccccCC----CCcccee-ecCHHHHcc----CCCCchhhhHHHHHHHHHHHhCCC
Confidence            5559999999999999999999865433221    1233345 999999877    678889999999999999997 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.. ....+....+..+..+.. +..+++.+++++.
T Consensus       198 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  233 (256)
T cd05082         198 VPYPR-IPLKDVVPRVEKGYKMDA-PDGCPPVVYDVMK  233 (256)
T ss_pred             CCCCC-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            99987 344444444545554444 4567888888875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.90  E-value=2.5e-22  Score=147.48  Aligned_cols=166  Identities=22%  Similarity=0.239  Sum_probs=115.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .....  ....++++++...+++.+.+..                   .+..|+|+.++   .|+
T Consensus        53 ~~l~~l~h~~i~~~-~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~  126 (260)
T cd05069          53 QIMKKLRHDKLVPL-YAVVS--EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY---IHR  126 (260)
T ss_pred             HHHHhCCCCCeeeE-EEEEc--CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eec
Confidence            46778888887654 34333  3457789998887777664321                   01247777665   455


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |++|+||+++.++.++|+|||.+...............++.. |+|||....    ...+.++|+||+|+++|+|++ |.
T Consensus       127 dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~~Pe~~~~----~~~~~~~Di~slG~~l~el~t~g~  201 (260)
T cd05069         127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALY----GRFTIKSDVWSFGILLTELVTKGR  201 (260)
T ss_pred             ccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchh-hCCHHHhcc----CCcChHHHHHHHHHHHHHHHhCCC
Confidence            566999999999999999999987654332211111233445 999998877    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+ ..+.+...++..+..++. +...+..+++++++
T Consensus       202 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  238 (260)
T cd05069         202 VPYPG-MVNREVLEQVERGYRMPC-PQGCPESLHELMKL  238 (260)
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CcccCHHHHHHHHH
Confidence            99988 345455555555554444 44678888888753

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.90  E-value=2.1e-22  Score=151.22  Aligned_cols=164  Identities=16%  Similarity=0.190  Sum_probs=109.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRCI   50 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~~   50 (182)
                      ++..+.++++++.+.+... ++..+++++++..++++.+.+..                                 .+.+
T Consensus        60 ~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~  138 (303)
T cd05088          60 VLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD  138 (303)
T ss_pred             HHHHhcCCCCcceEEEEEC-CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHH
Confidence            4556733344556666655 45668899998877766554321                                 1134


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWS  130 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diws  130 (182)
                      |||+.+++|   +|+||+||+++.++.+||+|||++........  ......+.. |+|||.+..    ..++.++|+||
T Consensus       139 ~LH~~gi~H---~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~s  208 (303)
T cd05088         139 YLSQKQFIH---RDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVR-WMAIESLNY----SVYTTNSDVWS  208 (303)
T ss_pred             HHHhCCccc---cccchheEEecCCCcEEeCccccCcccchhhh--cccCCCccc-ccCHHHHhc----cCCcccccchh
Confidence            777776655   55559999999999999999999864322111  111222344 999998877    67789999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        131 LGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       131 lg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||++|+|+| |..||.+ ....+....+..+..+.. +..+++++.+++.
T Consensus       209 lG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  257 (303)
T cd05088         209 YGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEK-PLNCDDEVYDLMR  257 (303)
T ss_pred             hhhHHHHHHhcCCCCccc-CChHHHHHHHhcCCcCCC-CCCCCHHHHHHHH
Confidence            9999999998 9999987 333344444433333333 3457788888775

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.90  E-value=3.1e-22  Score=146.89  Aligned_cols=166  Identities=21%  Similarity=0.240  Sum_probs=114.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|++++... ...  .....++++++...+++.+.+..                 +  ...|||+.+++|   +
T Consensus        53 ~~l~~l~~~~i~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H---~  126 (260)
T cd05070          53 QIMKKLRHDKLVQLY-AVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH---R  126 (260)
T ss_pred             HHHHhcCCCceEEEE-eEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccc---C
Confidence            467788888876543 333  33457889988877766554311                 0  124777776554   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+...............++.. |+|||.+..    ..++.++|+||||+++|++++ |.
T Consensus       127 di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~l~~~g~  201 (260)
T cd05070         127 DLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALY----GRFTIKSDVWSFGILLTELVTKGR  201 (260)
T ss_pred             CCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCcc-ccChHHHhc----CCCcchhhhHHHHHHHHHHHhcCC
Confidence            566999999999999999999987654432211111223345 999999876    678899999999999999999 89


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+....+..+..++. +...+..+++++++
T Consensus       202 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  238 (260)
T cd05070         202 VPYPG-MNNREVLEQVERGYRMPC-PQDCPISLHELMLQ  238 (260)
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCcCCHHHHHHHHH
Confidence            99987 345455555555544544 45577888887753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.90  E-value=2.5e-22  Score=150.28  Aligned_cols=165  Identities=18%  Similarity=0.261  Sum_probs=113.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++..+ +... +....++++++..++++.+++..                ....|+|..+++|   +|+||
T Consensus        70 ~l~~~~h~~v~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H---~dLkp  144 (296)
T cd06654          70 VMRENKNPNIVNYL-DSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH---RDIKS  144 (296)
T ss_pred             HHHhCCCCCEeeEE-EEEE-eCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCCCH
Confidence            56677887766544 3333 35578899999888777664321                1134777776555   55559


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+......... .....++.. |+|||.+..    ..++.++|+||+||++|+|++|..||..
T Consensus       145 ~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~s~Gvil~~l~~g~~pf~~  218 (296)
T cd06654         145 DNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPY-WMAPEVVTR----KAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (296)
T ss_pred             HHEEEcCCCCEEECccccchhccccccc-cCcccCCcc-ccCHHHHcC----CCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999988654332211 122456677 999999887    6778999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                       ..+......+.....+.++ +..++..+.++++
T Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (296)
T cd06654         219 -ENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (296)
T ss_pred             -CCHHHhHHHHhcCCCCCCCCccccCHHHHHHHH
Confidence             3443433333333223332 4467888888775

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.90  E-value=4.9e-22  Score=149.84  Aligned_cols=165  Identities=17%  Similarity=0.255  Sum_probs=111.9

Q ss_pred             HHHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------------H--HH
Q psy17162          4 IRAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------------L--RC   49 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------------~--~~   49 (182)
                      +++.+. |+|+ +.+.+... +...+++++++...+++.+++..                               +  ++
T Consensus        70 ~l~~l~~h~~i-v~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL  147 (314)
T cd05099          70 LMKLIGKHKNI-INLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGM  147 (314)
T ss_pred             HHHhccCCCCe-eeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHH
Confidence            455564 5554 45555554 45668899999887776554321                               1  13


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhc-ccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRG-LYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|+|+.+++|+   |+||+||+++.++.+||+|||.++.......... ....++.. |+|||.+..    ..++.++|+
T Consensus       148 ~~lH~~gi~H~---dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  219 (314)
T cd05099         148 EYLESRRCIHR---DLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVK-WMAPEALFD----RVYTHQSDV  219 (314)
T ss_pred             HHHHHCCeeec---cccceeEEEcCCCcEEEccccccccccccccccccccCCCCcc-ccCHHHHcc----CCcCccchh
Confidence            47887766555   5559999999999999999999976543221101 11223345 999999887    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+|+++|++++ |..||.+ ....+....+..+..+.. +..++.++++++.
T Consensus       220 wslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  270 (314)
T cd05099         220 WSFGILMWEIFTLGGSPYPG-IPVEELFKLLREGHRMDK-PSNCTHELYMLMR  270 (314)
T ss_pred             hHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            999999999999 8999987 344444544545544444 4557778888765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.90  E-value=7.1e-23  Score=156.87  Aligned_cols=132  Identities=16%  Similarity=0.180  Sum_probs=96.2

Q ss_pred             HHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHH----------------HHHHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQ----------------KELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~----------------~~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++..+..+...    +...+++++|+.......                +.+.++  .|||+.+++|   +
T Consensus        69 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL--~~LH~~givH---r  143 (355)
T cd07874          69 LMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI--KHLHSAGIIH---R  143 (355)
T ss_pred             HHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHH--HHHHhCCccc---C
Confidence            56778888887554433221    224567888887653221                122333  3777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||+++.......  .....++.. |+|||++.+    ..++.++|+||+||++|+|++|+.
T Consensus       144 Dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~  216 (355)
T cd07874         144 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMVRHKI  216 (355)
T ss_pred             CCChHHEEECCCCCEEEeeCcccccCCCccc--cCCccccCC-ccCHHHHcC----CCCCchhhHHHHHHHHHHHHhCCC
Confidence            5559999999999999999999976544322  222567777 999999987    678899999999999999999999


Q ss_pred             CCCC
Q psy17162        144 PYDT  147 (182)
Q Consensus       144 pf~~  147 (182)
                      ||.+
T Consensus       217 pf~~  220 (355)
T cd07874         217 LFPG  220 (355)
T ss_pred             CCCC
Confidence            9987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.90  E-value=4.1e-22  Score=147.60  Aligned_cols=167  Identities=18%  Similarity=0.260  Sum_probs=114.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------HHHHHHhhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------LRCIYIQDY   55 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------~~~~~l~~~   55 (182)
                      .+++.++|+|++. +.+... +...+++++|+..++++.+++..                           ....|+|+.
T Consensus        61 ~~l~~l~~~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  138 (277)
T cd05062          61 SVMKEFNCHHVVR-LLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN  138 (277)
T ss_pred             HHHHhCCCCCeee-EEEEEc-CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3566778877664 444444 45678889998877666543321                           112477776


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +++   |+|+||+||+++.++.++|+|||++.......... .....++.. |+|||.+..    ..++.++|+||||++
T Consensus       139 ~~v---H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~  210 (277)
T cd05062         139 KFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKD----GVFTTYSDVWSFGVV  210 (277)
T ss_pred             Ccc---cCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHh-hcChhHhhc----CCcCchhHHHHHHHH
Confidence            654   55566999999999999999999987543322110 111233455 999999987    678899999999999


Q ss_pred             HHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        135 LIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       135 l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|+|++ |..||.+ .........+..+..+.+ +...++.+++++.+
T Consensus       211 l~el~~~~~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  256 (277)
T cd05062         211 LWEIATLAEQPYQG-MSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRM  256 (277)
T ss_pred             HHHHHcCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHH
Confidence            999999 7899987 344455555555554444 45678888888754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.90  E-value=3.1e-22  Score=149.79  Aligned_cols=165  Identities=18%  Similarity=0.270  Sum_probs=115.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++. +.+... +...+++++++..++++.+.+..              +  ...+||+.++.   |+|++|
T Consensus        69 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~---H~dL~p  143 (296)
T cd06655          69 VMKELKNPNIVN-FLDSFL-VGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVI---HRDIKS  143 (296)
T ss_pred             HHHhcCCCceee-eeeeEe-cCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcc---cCCCCH
Confidence            456677877764 444443 45678899999888777664321              1  12477776655   555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||++......... .....++.. |+|||.+..    ..++.++|+||+||++|++++|..||.+
T Consensus       144 ~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slGvil~~lltg~~pf~~  217 (296)
T cd06655         144 DNVLLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPY-WMAPEVVTR----KAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (296)
T ss_pred             HHEEECCCCCEEEccCccchhccccccc-CCCcCCCcc-ccCcchhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999988664432221 112456667 999999887    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCC-CCCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRL-PPGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~-~~~~~s~~~~~~i~  180 (182)
                       ..+......+.....+.+ .+..+++.++++++
T Consensus       218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  250 (296)
T cd06655         218 -ENPLRALYLIATNGTPELQNPEKLSPIFRDFLN  250 (296)
T ss_pred             -CCHHHHHHHHHhcCCcccCCcccCCHHHHHHHH
Confidence             344454544443333333 24568888988874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.90  E-value=3.1e-22  Score=155.44  Aligned_cols=122  Identities=17%  Similarity=0.159  Sum_probs=86.3

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .|+|+||+||+++.++.+||+|||++.......... .....++.. |+|||.+.+    ..++.++|+
T Consensus       251 ~~LH~~~i---vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  322 (400)
T cd05105         251 EFLASKNC---VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVK-WMAPESIFD----NLYTTLSDV  322 (400)
T ss_pred             HHHHhCCe---eCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcc-eEChhhhcC----CCCCchhhH
Confidence            46776655   455566999999999999999999987654322110 111334455 999999987    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||............+..+..++. +..++.++++++.
T Consensus       323 wSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  374 (400)
T cd05105         323 WSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAK-PDHATQEVYDIMV  374 (400)
T ss_pred             HHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCC-CccCCHHHHHHHH
Confidence            999999999997 99999874333333334444544444 4567888888775

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.90  E-value=2.9e-22  Score=147.85  Aligned_cols=171  Identities=22%  Similarity=0.307  Sum_probs=112.2

Q ss_pred             HHHHh-CCCCcEEEEEEeeecC----CCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhc
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h   59 (182)
                      +++.+ .|+|++..........    ...+++++|+...+++.+.+..                   ....|||+.+++ 
T Consensus        55 ~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~iv-  133 (272)
T cd06637          55 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI-  133 (272)
T ss_pred             HHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence            45566 4555554433322211    2457899999887776664321                   012477776654 


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l~~l  138 (182)
                        |+|+||+||+++.++.++|+|||++......... .....++.. |+|||++..... ...++.++|+||+||++|+|
T Consensus       134 --h~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~g~~~-y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el  209 (272)
T cd06637         134 --HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPY-WMAPEVIACDENPDATYDFKSDLWSLGITAIEM  209 (272)
T ss_pred             --cCCCCHHHEEECCCCCEEEccCCCceeccccccc-CCccccccc-ccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence              5556699999999999999999998765432221 222567777 999999863211 14577899999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ++|..||... .+............+..++..++++++++++
T Consensus       210 ~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  250 (272)
T cd06637         210 AEGAPPLCDM-HPMRALFLIPRNPAPRLKSKKWSKKFQSFIE  250 (272)
T ss_pred             HhCCCCcccc-CHHHHHHHHhcCCCCCCCCCCcCHHHHHHHH
Confidence            9999999763 3434444433333333434567888888875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.89  E-value=5e-22  Score=149.28  Aligned_cols=165  Identities=16%  Similarity=0.225  Sum_probs=110.7

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|++ ++.+.+... +...+++++++...+++.+++..                                 ..+
T Consensus        76 ~l~~l~~h~~-i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL  153 (307)
T cd05098          76 MMKMIGKHKN-IINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGM  153 (307)
T ss_pred             HHHHhcCCCC-EeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHH
Confidence            45556 4555 455555555 34567889999887766554421                                 123


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc-cCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL-YGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      +|+|+.+++|   +|+||+||+++.++.++|+|||.+...........+ ...++.. |+|||.+.+    ..++.++|+
T Consensus       154 ~~lH~~gi~H---~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv  225 (307)
T cd05098         154 EYLASKKCIH---RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD----RIYTHQSDV  225 (307)
T ss_pred             HHHHHCCccc---ccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccc-eeChHHhcc----CCCCcHHHH
Confidence            4777776555   555599999999999999999998765432211111 1122345 999999887    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||.+ ....+....+..+..+.. +..++.+++++++
T Consensus       226 wslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  276 (307)
T cd05098         226 WSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDK-PSNCTNELYMMMR  276 (307)
T ss_pred             HHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHHcCCCCCC-CCcCCHHHHHHHH
Confidence            999999999998 8999977 344333333444444444 4567888888875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1989|consensus

Probab=99.89  E-value=2.2e-23  Score=167.45  Aligned_cols=169  Identities=17%  Similarity=0.191  Sum_probs=112.2

Q ss_pred             HHHHhC-CCCcEEEEE-Eee----ecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchh
Q psy17162          4 IRAVFN-QDEIGVTVS-SVK----TTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~~-~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~   58 (182)
                      +++.+. |+|+|-.+. ...    ..+..++++.||||.++.|++++..                   .+.+++|++. -
T Consensus        87 ~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-p  165 (738)
T KOG1989|consen   87 IMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-P  165 (738)
T ss_pred             HHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-C
Confidence            567777 666654443 111    1123567799999999999997631                   1224666665 0


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSL  131 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwsl  131 (182)
                      .+.|||||-+|||++.++..||||||.+.........       .......|.+.|++||++.-.+. .+.+.++|||+|
T Consensus       166 PiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg-~pI~eKsDIWAL  244 (738)
T KOG1989|consen  166 PIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSG-LPIGEKSDIWAL  244 (738)
T ss_pred             ccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcC-CCCcchhHHHHH
Confidence            1345555599999999999999999988653222110       00112334445999998763222 577899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCC-CCCCHHHHHHhh
Q psy17162        132 GISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP-GEFSSDFKDFIT  180 (182)
Q Consensus       132 g~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~~~~i~  180 (182)
                      ||+||.|+....||.+. ..    ..|+.+. ..+|+ ..+|+.+++||+
T Consensus       245 GclLYkLCy~t~PFe~s-g~----laIlng~-Y~~P~~p~ys~~l~~LI~  288 (738)
T KOG1989|consen  245 GCLLYKLCYFTTPFEES-GK----LAILNGN-YSFPPFPNYSDRLKDLIR  288 (738)
T ss_pred             HHHHHHHHHhCCCcCcC-cc----eeEEecc-ccCCCCccHHHHHHHHHH
Confidence            99999999999999872 12    2344443 45554 478999999986

>KOG0607|consensus

Probab=99.89  E-value=1.6e-23  Score=152.43  Aligned_cols=166  Identities=20%  Similarity=0.255  Sum_probs=114.3

Q ss_pred             CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-----------------HHHHHHHhhcchhcccccCCCCCcEEE
Q psy17162         10 QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-----------------TLRCIYIQDYHLCVRSTRYFSVDTFHQ   72 (182)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----------------~~~~~~l~~~~~~h~~~~~lk~~nil~   72 (182)
                      |.|++ .+.++++ ++..+|+++|...++++.+.+.                 +.++.+||..++.|+|   +||+|||.
T Consensus       135 h~nil-qLiefFE-dd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRD---lKPENiLC  209 (463)
T KOG0607|consen  135 HKNIL-QLIEFFE-DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRD---LKPENILC  209 (463)
T ss_pred             CccHH-HHHHHhc-ccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCccccc---CCccceee
Confidence            44443 4445555 6778999999999999877541                 1234577777765555   55999999


Q ss_pred             cCCCe---EEEeccCCCCCCCchhh------hhcccCCCCCCcccCccccCC-CCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         73 RLQFL---LHLFRFALSGNQDDLLI------IRGLYGADCDPNFIRPERIDP-SGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        73 ~~~~~---~kl~dfg~a~~~~~~~~------~~~~~~~~~~~~~~aPe~~~~-~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ....+   +|||||.++.....+..      +...+.+|+.- |||||+... .+...-|+.++|.||||+++|.|+.|.
T Consensus       210 ~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAE-fMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGY  288 (463)
T KOG0607|consen  210 ESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAE-FMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGY  288 (463)
T ss_pred             cCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchh-hcchhHHhhhccccccccccccHHHHHHHHHHHHhCC
Confidence            76654   69999987655432211      11234788888 999998651 011156889999999999999999999


Q ss_pred             CCCCCC-------CC------cHHHHHHHhhCCCCCCCCC---CCCHHHHHHhhh
Q psy17162        143 FPYDTW-------GS------PFEQLKQVVQDDPPRLPPG---EFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~-------~~------~~~~~~~i~~~~~~~~~~~---~~s~~~~~~i~~  181 (182)
                      +||.|.       +.      =.+.++.-++.....||..   .+|.+++|+|+.
T Consensus       289 pPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisn  343 (463)
T KOG0607|consen  289 PPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISN  343 (463)
T ss_pred             CCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHH
Confidence            999862       11      1233444455556788743   689999999863

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.89  E-value=4e-22  Score=148.03  Aligned_cols=170  Identities=22%  Similarity=0.311  Sum_probs=115.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++. +.+... +....++++|+...+.+...+..                  ....+||+.++.|   +|+
T Consensus        55 ~l~~l~h~~ii~-~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H---~dl  129 (282)
T cd06643          55 ILASCDHPNIVK-LLDAFY-YENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIH---RDL  129 (282)
T ss_pred             HHHHCCCCCeee-EEEEEe-eCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee---cCC
Confidence            566788877764 444443 35567889998877666443210                  1124777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.++++|||++......... .....++.. |+|||++.... ....++.++|+||+||++|+|++|++|
T Consensus       130 kp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p  207 (282)
T cd06643         130 KAGNILFTLDGDIKLADFGVSAKNTRTIQR-RDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPP  207 (282)
T ss_pred             CcccEEEccCCCEEEccccccccccccccc-ccccccccc-ccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCC
Confidence            699999999999999999998665432221 122456777 99999985311 114567899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      |.. ..+.+....+....++..+ +..++.++++++++
T Consensus       208 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (282)
T cd06643         208 HHE-LNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKK  244 (282)
T ss_pred             ccc-cCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHH
Confidence            987 4555555555554433332 44688899998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.89  E-value=2.1e-22  Score=149.95  Aligned_cols=165  Identities=13%  Similarity=0.166  Sum_probs=112.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|++++.......  +...+++++++..++++.+.+..                   .+..|+|+.+++   |+
T Consensus        52 ~il~~l~~~~i~~~~~~~~--~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii---H~  126 (285)
T cd05630          52 QILEKVNSRFVVSLAYAYE--TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV---YR  126 (285)
T ss_pred             HHHHhCCCCCeeeeeEEEe--cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE---eC
Confidence            3667788877765433333  34568899999887777554311                   112477776655   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||++........  .....|+.. |+|||++..    ..++.++|+||+|+++|+|++|..
T Consensus       127 dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~g~~~-y~aPE~~~~----~~~~~~~DiwslG~~l~~l~~g~~  199 (285)
T cd05630         127 DLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVG-YMAPEVVKN----ERYTFSPDWWALGCLLYEMIAGQS  199 (285)
T ss_pred             CCCHHHEEECCCCCEEEeeccceeecCCCcc--ccCCCCCcc-ccChHHHcC----CCCCCccccHHHHHHHHHHHhCCC
Confidence            5669999999999999999999865443222  122457777 999999987    678899999999999999999999


Q ss_pred             CCCCCCCc--HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSP--FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+....  ..............+ +..++++++++++
T Consensus       200 Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  237 (285)
T cd05630         200 PFQQRKKKIKREEVERLVKEVQEEY-SEKFSPDARSLCK  237 (285)
T ss_pred             CCCCCCccchHHHHHhhhhhhhhhc-CccCCHHHHHHHH
Confidence            99863221  122222222222333 4457888888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=3.2e-22  Score=147.92  Aligned_cols=166  Identities=24%  Similarity=0.315  Sum_probs=119.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++.... ... ++..+++++++...+++.+.+..                ....++|+.+++|+   |++|
T Consensus        52 ~l~~l~h~~i~~~~~-~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~---dl~p  126 (274)
T cd06609          52 FLSQCRSPYITKYYG-SFL-KGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHR---DIKA  126 (274)
T ss_pred             HHHHcCCCCeeeeeE-EEE-ECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCCH
Confidence            567788887765444 333 34678899998887777664321                12347887776555   5559


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+......... .....++.. |+|||.+.+    ..++.++|+||+|+++|+|++|++||..
T Consensus       127 ~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~----~~~~~~sDv~slG~il~~l~tg~~p~~~  200 (274)
T cd06609         127 ANILLSEEGDVKLADFGVSGQLTSTMSK-RNTFVGTPF-WMAPEVIKQ----SGYDEKADIWSLGITAIELAKGEPPLSD  200 (274)
T ss_pred             HHEEECCCCCEEEcccccceeecccccc-cccccCCcc-ccChhhhcc----CCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            9999999999999999998776543221 222566777 999999987    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                       ..+......+..+..+.++...++.++.+++++
T Consensus       201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  233 (274)
T cd06609         201 -LHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSL  233 (274)
T ss_pred             -CchHHHHHHhhhcCCCCCcccccCHHHHHHHHH
Confidence             345455555555655555333378888888763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.89  E-value=4e-22  Score=147.91  Aligned_cols=163  Identities=28%  Similarity=0.434  Sum_probs=112.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH---------------HHHHHHHHHhhcchhcccccCCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE---------------LETLRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------l~~~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      ++++.++|+|++..+. ... +....++++|+...+.+...               +.+  ..|+|+.+++|+   |+||
T Consensus        51 ~~l~~l~h~~iv~~~~-~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~--l~~lH~~~i~H~---dlkp  123 (279)
T cd06619          51 EILYKCDSPYIIGFYG-AFF-VENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKG--LTYLWSLKILHR---DVKP  123 (279)
T ss_pred             HHHHhCCCCCeeeEEE-EEE-ECCEEEEEEecCCCCChHHhhcCCHHHHHHHHHHHHHH--HHHHHHCCEeeC---CCCH
Confidence            3566778877765444 333 34567788988887765431               222  347887766555   5559


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||++........   ....++.. |+|||.+..    ..++.++|+||+|+++|+|++|+.||..
T Consensus       124 ~Nill~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         124 SNMLVNTRGQVKLCDFGVSTQLVNSIA---KTYVGTNA-YMAPERISG----EQYGIHSDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             HHEEECCCCCEEEeeCCcceecccccc---cCCCCChh-hcCceeecC----CCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence            999999999999999999876543322   22567777 999999987    6788999999999999999999999965


Q ss_pred             CCC------cHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        148 WGS------PFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~------~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ...      +......+....++.++....++++++++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  234 (279)
T cd06619         196 IQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT  234 (279)
T ss_pred             hcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence            211      112222333344444444457788888775

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=5.3e-22  Score=145.43  Aligned_cols=166  Identities=17%  Similarity=0.179  Sum_probs=115.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.+.|+|++ .+.+... +....++++|+..++++.+++..                  ....+||+.+++|   +|
T Consensus        51 ~~l~~l~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H---~d  125 (256)
T cd05059          51 KVMMKLSHPNLV-QLYGVCT-KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIH---RD  125 (256)
T ss_pred             HHHHhCCCCCEE-EEEEEEc-CCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccc---cc
Confidence            367778887765 4444444 45567899998877776654311                  1134777777655   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||.+....+..........++.. |+|||.+.+    ..++.++|+||+|+++|++++ |..
T Consensus       126 l~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~-y~~Pe~~~~----~~~~~~~Di~slG~il~~l~~~g~~  200 (256)
T cd05059         126 LAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVK-WAPPEVFDY----SRFSSKSDVWSFGVLMWEVFSEGKM  200 (256)
T ss_pred             ccHhhEEECCCCcEEECCcccceecccccccccCCCCCCcc-ccCHHHhcc----CCCCchhhHHHHHHHHHHHhccCCC
Confidence            55999999999999999999987654332211111112234 999999987    678899999999999999998 899


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. ..+.+....+..+..+.. +..+|+++++++.
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  235 (256)
T cd05059         201 PYER-FSNSEVVESVSAGYRLYR-PKLAPTEVYTIMY  235 (256)
T ss_pred             CCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            9987 345555555555544444 3457888888875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=3.9e-22  Score=147.73  Aligned_cols=167  Identities=20%  Similarity=0.235  Sum_probs=115.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------------HHHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------------LRCIY   51 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------------~~~~~   51 (182)
                      ++++.++|+|++. +.+... +....++++++..++++.+++..                               ....+
T Consensus        60 ~~l~~l~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~  137 (280)
T cd05049          60 ELLTNFQHENIVK-FYGVCT-EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVY  137 (280)
T ss_pred             HHHHhcCCCCchh-eeeEEe-cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence            3677788877654 444444 34678899998776665543311                               11247


Q ss_pred             HhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHH
Q psy17162         52 IQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWS  130 (182)
Q Consensus        52 l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diws  130 (182)
                      +|+.+++|   +|+||+||+++.++.++|+|||.+........ .......++.. |+|||.+..    ..++.++|+||
T Consensus       138 lH~~~i~h---~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~s  209 (280)
T cd05049         138 LASQHFVH---RDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIR-WMPPESIMY----RKFTTESDVWS  209 (280)
T ss_pred             HhhCCeec---cccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccce-ecChhhhcc----CCcchhhhHHH
Confidence            88776555   55669999999999999999999865422211 00111234455 999999987    77889999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        131 LGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       131 lg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|+++|+|++ |..||.+ ....+....+..+..+.. +..++..+++++++
T Consensus       210 lG~il~e~~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  259 (280)
T cd05049         210 FGVVLWEIFTYGKQPWYG-LSNEEVIECITQGRLLQR-PRTCPSEVYDIMLG  259 (280)
T ss_pred             HHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHH
Confidence            9999999998 9999987 344455555555554433 55688888888753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.89  E-value=5.8e-22  Score=147.87  Aligned_cols=169  Identities=23%  Similarity=0.310  Sum_probs=113.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.+... .+..+++++++..++.+...+..                  ....++|+.+++   |+|+
T Consensus        62 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~---H~dl  136 (292)
T cd06644          62 ILATCNHPYIVK-LLGAFY-WDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKII---HRDL  136 (292)
T ss_pred             HHHhCCCCcEee-eEEEEE-eCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCee---ecCC
Confidence            567788877654 444444 45578899999887776543210                  113477776555   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |+|||.+.... ....++.++|+||+||++|+|++|.+|
T Consensus       137 kp~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p  214 (292)
T cd06644         137 KAGNVLLTLDGDIKLADFGVSAKNVKTLQR-RDSFIGTPY-WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP  214 (292)
T ss_pred             CcceEEEcCCCCEEEccCccceeccccccc-cceecCCcc-ccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCC
Confidence            699999999999999999987654332211 122456667 99999985311 114567889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      |.. ..+.....++.....+..+ +..++.++.++++
T Consensus       215 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  250 (292)
T cd06644         215 HHE-LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLK  250 (292)
T ss_pred             Ccc-ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHH
Confidence            987 3444445454444433332 4467888888775

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.89  E-value=5.6e-22  Score=146.41  Aligned_cols=164  Identities=16%  Similarity=0.190  Sum_probs=109.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRCI   50 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~~   50 (182)
                      ++..+.++.+++.+.+... ....+++++++...+++.+.+..                                 .+.+
T Consensus        48 ~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~  126 (270)
T cd05047          48 VLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD  126 (270)
T ss_pred             HHHhhccCCCeeeEEEEEe-cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHH
Confidence            4556633444556666655 34567889998776666544311                                 1235


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWS  130 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diws  130 (182)
                      |+|+.+++|   +|+||+||+++.++.+|++|||++........  ......+.. |+|||.+..    ..++.++|+||
T Consensus       127 ~lH~~~i~H---~dikp~nili~~~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~-y~apE~~~~----~~~~~~~Di~s  196 (270)
T cd05047         127 YLSQKQFIH---RDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVR-WMAIESLNY----SVYTTNSDVWS  196 (270)
T ss_pred             HHHHCCEee---cccccceEEEcCCCeEEECCCCCccccchhhh--ccCCCCccc-cCChHHHcc----CCCCchhhHHH
Confidence            788766555   55559999999999999999999854322111  111222344 999999877    67889999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        131 LGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       131 lg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+++|+|++ |..||.+ ....+....+..+..... +...+.++.+++.
T Consensus       197 lG~il~el~~~g~~pf~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  245 (270)
T cd05047         197 YGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEK-PLNCDDEVYDLMR  245 (270)
T ss_pred             HHHHHHHHHcCCCCCccc-cCHHHHHHHHhCCCCCCC-CCcCCHHHHHHHH
Confidence            9999999997 9999987 344344444544444444 3456778887765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.89  E-value=5.1e-22  Score=148.14  Aligned_cols=165  Identities=17%  Similarity=0.234  Sum_probs=112.6

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|+|++ .+.+... ....+++++++...+++.+++..                                 ...
T Consensus        68 ~l~~l~~h~~i~-~~~~~~~-~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  145 (293)
T cd05053          68 MMKMIGKHKNII-NLLGVCT-QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGM  145 (293)
T ss_pred             HHHhhcCCCCee-eEEEEEc-CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            45566 565554 4555544 45668899998877766554421                                 123


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhc-ccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRG-LYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++|++   +||+||+++.++.+||+|||.+........... ....++.. |+|||.+..    ..++.++|+
T Consensus       146 ~~LH~~~ivH~d---lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  217 (293)
T cd05053         146 EFLASKKCIHRD---LAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVK-WMAPEALFD----RVYTHQSDV  217 (293)
T ss_pred             HHHHHCCccccc---cceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCcc-ccCHHHhcc----CCcCcccce
Confidence            488877766655   559999999999999999999876544322111 11223345 999999877    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|++++ |..||.+ ....+....+..+..+.. +...++++.+++.
T Consensus       218 ~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  268 (293)
T cd05053         218 WSFGVLLWEIFTLGGSPYPG-IPVEELFKLLKEGYRMEK-PQNCTQELYHLMR  268 (293)
T ss_pred             eehhhHHHHHhcCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            999999999997 9999987 344444444445544444 4456788888764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.89  E-value=5.2e-22  Score=145.27  Aligned_cols=165  Identities=18%  Similarity=0.251  Sum_probs=119.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+... +...+++++|+...+++.+.+...                   ...++|+.+++|   +
T Consensus        51 ~~l~~~~h~~i~~~-~~~~~-~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h---~  125 (256)
T cd08221          51 VILSLLQHPNIIAY-YNHFM-DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILH---R  125 (256)
T ss_pred             HHHHhCCCCCeeEE-EeEEe-cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccc---c
Confidence            36778888776544 44444 356788899998877776654221                   234777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |++|+||+++.++.+||+|||.+......... .....++.. |+|||.+.+    ..++.++|+||+|+++|+|++|..
T Consensus       126 dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~-y~ape~~~~----~~~~~~~Dv~slG~i~~~l~~g~~  199 (256)
T cd08221         126 DIKTLNIFLTKAGLIKLGDFGISKILGSEYSM-AETVVGTPY-YMSPELCQG----VKYNFKSDIWALGCVLYELLTLKR  199 (256)
T ss_pred             CCChHhEEEeCCCCEEECcCcceEEccccccc-ccccCCCcc-ccCHhhcCC----CCCCCcchhHHHHHHHHHHHHCCC
Confidence            55599999999999999999998765443321 122556777 999999887    567789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. ....+....+..+..++. +..++.++.++++
T Consensus       200 ~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  234 (256)
T cd08221         200 TFDA-TNPLNLVVKIVQGNYTPV-VSVYSSELISLVH  234 (256)
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCC-ccccCHHHHHHHH
Confidence            9987 455566666666654444 3557888888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.89  E-value=3.4e-22  Score=148.35  Aligned_cols=171  Identities=23%  Similarity=0.290  Sum_probs=113.3

Q ss_pred             HHHHhC-CCCcEEEEEEeee-----cCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchh
Q psy17162          4 IRAVFN-QDEIGVTVSSVKT-----TDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~   58 (182)
                      +++.+. |+|+ +.+.+...     .....+++++|+...+++.+.+..                   ....|||+.+++
T Consensus        65 ~l~~~~~h~~i-~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~iv  143 (282)
T cd06636          65 MLKKYSHHRNI-ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVI  143 (282)
T ss_pred             HHHHhcCCCcE-EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            455564 5555 44444432     134567899999877665543211                   123478877665


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~  137 (182)
                      |+   |++|+||+++.++.++|+|||.+......... .....++.. |+|||.+.... ....++.++|+||+|+++|+
T Consensus       144 H~---dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~e  218 (282)
T cd06636         144 HR---DIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPY-WMAPEVIACDENPDATYDYRSDIWSLGITAIE  218 (282)
T ss_pred             cC---CCCHHHEEECCCCCEEEeeCcchhhhhccccC-CCccccccc-ccCHhhcCcccCcCcCCCcccchhHHHHHHHH
Confidence            55   55599999999999999999998654332211 122456777 99999886321 11457788999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |++|..||... .+......+.....+.+.+..+|.++.+++++
T Consensus       219 l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  261 (282)
T cd06636         219 MAEGAPPLCDM-HPMRALFLIPRNPPPKLKSKKWSKKFIDFIEG  261 (282)
T ss_pred             HHhCCCCcccc-CHHhhhhhHhhCCCCCCcccccCHHHHHHHHH
Confidence            99999999773 44454544444444445455688899988853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.89  E-value=5.4e-22  Score=147.19  Aligned_cols=168  Identities=34%  Similarity=0.583  Sum_probs=115.0

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------------------H--HHHHHHhhc-chhcccc
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------------------T--LRCIYIQDY-HLCVRST   62 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------------------~--~~~~~l~~~-~~~h~~~   62 (182)
                      ++...|+|++ .+.+... ....+++++++..+ .+.+.+.                   .  ....|+|+. ++   .|
T Consensus        54 ~~~~~~~~iv-~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i---~h  127 (283)
T cd06617          54 MRSVDCPYTV-TFYGALF-REGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV---IH  127 (283)
T ss_pred             HHHcCCCCee-eeeEEEe-cCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe---ec
Confidence            3445556655 4444444 45668888888653 2222110                   0  112477764 54   45


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||.+........  .+...++.. |+|||.+.+......++.++|+||+||++|+|++|+
T Consensus       128 ~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~  204 (283)
T cd06617         128 RDVKPSNVLINRNGQVKLCDFGISGYLVDSVA--KTIDAGCKP-YMAPERINPELNQKGYDVKSDVWSLGITMIELATGR  204 (283)
T ss_pred             CCCCHHHEEECCCCCEEEeecccccccccccc--cccccCCcc-ccChhhcCCcccccccCccccchhhHHHHHHHHhCC
Confidence            55669999999999999999999876543322  222456677 999998865222245678999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.......+.+..+..+..+.++...+|.++++++++
T Consensus       205 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  243 (283)
T cd06617         205 FPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNK  243 (283)
T ss_pred             CCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence            999764456666667667766777666789999998863

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.89  E-value=6e-22  Score=146.08  Aligned_cols=164  Identities=18%  Similarity=0.219  Sum_probs=110.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCC-----CceEEEeccCccchHHHHH-------------------------HHHHHHHHh
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDD-----KKVVLVTGKGEAEKVQKEL-------------------------ETLRCIYIQ   53 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l-------------------------~~~~~~~l~   53 (182)
                      +++.+.|+|++.. .++.....     ...++++++...+++...+                         .+  ..|+|
T Consensus        54 ~l~~l~h~~iv~~-~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a--L~~lH  130 (273)
T cd05035          54 CMKDFDHPNVMKL-IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG--MEYLS  130 (273)
T ss_pred             HHHhCCCCCeeeE-EeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH--HHHHH
Confidence            4566778776643 33332222     2356888887766654432                         22  34788


Q ss_pred             hcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         54 DYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        54 ~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      +.+++|   +|+||+||+++.++.+||+|||.++......... ......+.. |+|||.+..    ..++.++|+||+|
T Consensus       131 ~~~i~H---~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-~~~pe~~~~----~~~~~~~Dv~SlG  202 (273)
T cd05035         131 NRNFIH---RDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK-WIAIESLAD----RVYTSKSDVWAFG  202 (273)
T ss_pred             hCCeec---cccchheEEECCCCeEEECCccceeeccccccccccccccCCcc-ccCHhhccc----CCCCcccchHHHH
Confidence            776555   5566999999999999999999987654332111 111223345 999999877    6788999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        133 ISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       133 ~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |++|+|++ |.+||.+ ....+....+..+..+.. +..+++++.+++.
T Consensus       203 ~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  249 (273)
T cd05035         203 VTMWEIATRGQTPYPG-VENHEIYDYLRHGNRLKQ-PEDCLDELYDLMY  249 (273)
T ss_pred             HHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCC-CcCCCHHHHHHHH
Confidence            99999999 8999987 344455555555555555 4567888888775

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.89  E-value=5.5e-22  Score=146.38  Aligned_cols=167  Identities=17%  Similarity=0.194  Sum_probs=111.7

Q ss_pred             HHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHHHHH---------------------H--HHHHHHhhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQKELE---------------------T--LRCIYIQDYH   56 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~---------------------~--~~~~~l~~~~   56 (182)
                      +++.++|+|++..+......    .....++++++...+++.+.+.                     .  ....|+|..+
T Consensus        53 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  132 (272)
T cd05075          53 CMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS  132 (272)
T ss_pred             HHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56778888877554332221    1224567777776666544320                     0  1134788776


Q ss_pred             hhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      ++|   +|+||+||+++.++.++|+|||.+.......... ......+.. |++||....    ..++.++|+||+|+++
T Consensus       133 i~H---~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-~~~pe~~~~----~~~~~~~Di~slG~il  204 (272)
T cd05075         133 FIH---RDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVK-WIAIESLAD----RVYTTKSDVWSFGVTM  204 (272)
T ss_pred             eec---cccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcc-cCCHHHccC----CCcChHHHHHHHHHHH
Confidence            555   5555999999999999999999987754432211 111223445 999999887    6788999999999999


Q ss_pred             HHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        136 IELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       136 ~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |++++ |+.||.+ ....+....+..+..++. +..+++.+++++.
T Consensus       205 ~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  248 (272)
T cd05075         205 WEIATRGQTPYPG-VENSEIYDYLRQGNRLKQ-PPDCLDGLYSLMS  248 (272)
T ss_pred             HHHHcCCCCCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99999 8999987 345455555555554444 3457788888775

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.89  E-value=5.5e-22  Score=148.86  Aligned_cols=166  Identities=16%  Similarity=0.223  Sum_probs=113.1

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|+|++ .+.+... ....+++++++...+++.+++..                                 ...
T Consensus        73 ~l~~l~~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  150 (304)
T cd05101          73 MMKMIGKHKNII-NLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGM  150 (304)
T ss_pred             HHHhhccCCCch-heeEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHH
Confidence            55667 565554 4555444 34567899999887776654321                                 013


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++|   +|+||+||+++.++.+||+|||.+.......... .....++.. |+|||++.+    ..++.++|+
T Consensus       151 ~~LH~~givH---~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  222 (304)
T cd05101         151 EYLASQKCIH---RDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVK-WMAPEALFD----RVYTHQSDV  222 (304)
T ss_pred             HHHHHCCeee---cccccceEEEcCCCcEEECCCccceecccccccccccCCCCCce-eeCchhhcc----CCCCchhhH
Confidence            4777776555   5566999999999999999999987654322111 111233455 999999987    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||+|+++|++++ |..||.+ ....+....+..+..... +..++.++++++.+
T Consensus       223 ~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  274 (304)
T cd05101         223 WSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDK-PANCTNELYMMMRD  274 (304)
T ss_pred             HHHHHHHHHHHcCCCCCccc-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHH
Confidence            999999999998 8899987 344444444444444434 45678888888753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=5.1e-22  Score=146.90  Aligned_cols=166  Identities=19%  Similarity=0.273  Sum_probs=115.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------HHHHHHhhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------LRCIYIQDY   55 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------~~~~~l~~~   55 (182)
                      .+++.++|+|++ .+.++.. +....++++|+...+++.+.+..                           ....|+|+.
T Consensus        61 ~~l~~~~~~~i~-~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  138 (277)
T cd05032          61 SVMKEFNCHHVV-RLLGVVS-TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK  138 (277)
T ss_pred             HHHHhCCCCcee-EEEEEEc-CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            356677777665 5555555 34667889998877676654321                           012477766


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +++|   +|+||+||+++.++.+||+|||.++........ ......++.. |+|||.+..    ..++.++|+|||||+
T Consensus       139 ~i~H---~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~i  210 (277)
T cd05032         139 KFVH---RDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKD----GVFTTKSDVWSFGVV  210 (277)
T ss_pred             Cccc---cccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCcccc-ccCHHHHhc----CCCCcccchHHHHHH
Confidence            5555   556699999999999999999998765433211 1122334556 999999877    678899999999999


Q ss_pred             HHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        135 LIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       135 l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|++++ |..||.+ ....+....+..+..+.+ |..+++++.++++
T Consensus       211 l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  255 (277)
T cd05032         211 LWEMATLAEQPYQG-LSNEEVLKFVIDGGHLDL-PENCPDKLLELMR  255 (277)
T ss_pred             HHHhhccCCCCCcc-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            999998 9999987 455455555555555555 4557888888875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.89  E-value=7.7e-22  Score=147.19  Aligned_cols=165  Identities=19%  Similarity=0.227  Sum_probs=115.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRCI   50 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~~   50 (182)
                      +++.++|+|++. +.+... +....++++++..++++.+++..                                 ....
T Consensus        60 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~  137 (291)
T cd05094          60 LLTNLQHEHIVK-FYGVCG-DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV  137 (291)
T ss_pred             HHhcCCCCCcce-EEEEEc-cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHH
Confidence            566778877664 444444 45568899999877776654321                                 0124


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      ++|+.+++|+   |+||+||+++.++.++|+|||.+........ .......++.. |+|||.+..    ..++.++|+|
T Consensus       138 ~lH~~~i~H~---dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~  209 (291)
T cd05094         138 YLASQHFVHR---DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPESIMY----RKFTTESDVW  209 (291)
T ss_pred             HHHhCCeeec---ccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCccee-ecChHHhcc----CCCCchhhHH
Confidence            7777766555   5559999999999999999999866433221 01122334556 999999887    6788899999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|+++|+|++ |..||.. ....+....+..+..+.. +..+|+.+++++.
T Consensus       210 slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  259 (291)
T cd05094         210 SFGVILWEIFTYGKQPWFQ-LSNTEVIECITQGRVLER-PRVCPKEVYDIML  259 (291)
T ss_pred             HHHHHHHHHHhCCCCCCCC-CCHHHHHHHHhCCCCCCC-CccCCHHHHHHHH
Confidence            99999999998 9999977 344455555555554444 4567888888775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=5.7e-22  Score=147.21  Aligned_cols=163  Identities=14%  Similarity=0.170  Sum_probs=111.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-----------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-----------------------------------ETLR   48 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-----------------------------------~~~~   48 (182)
                      +++.+.|+|++. +..+.. +...+++++++...+++.+.+                                   .+  
T Consensus        61 ~~~~l~h~~iv~-~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~a--  136 (283)
T cd05091          61 MRSRLQHPNIVC-LLGVVT-KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAG--  136 (283)
T ss_pred             HHhcCCCCCcCe-EEEEEc-CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHH--
Confidence            456677777664 444444 334567777776655544332                                   22  


Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccch
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSD  127 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~D  127 (182)
                      ..|+|+.+++|   +|+||+||+++.++.+||+|||+++......... .....+++. |+|||.+..    ..++.++|
T Consensus       137 L~~lH~~gi~H---~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~D  208 (283)
T cd05091         137 MEFLSSHHVVH---KDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIR-WMSPEAIMY----GKFSIDSD  208 (283)
T ss_pred             HHHHHHcCccc---cccchhheEecCCCceEecccccccccccchheeeccCccCCcc-ccCHHHHhc----CCCCcchh
Confidence            34888776655   5555999999999999999999987654332211 111233455 999999877    67889999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        128 VWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       128 iwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||+||++|+|++ |..||.+ ....+....+..+...+. +..+++.+.+++.
T Consensus       209 v~slG~~l~el~~~g~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~  260 (283)
T cd05091         209 IWSYGVVLWEVFSYGLQPYCG-YSNQDVIEMIRNRQVLPC-PDDCPAWVYTLML  260 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            9999999999998 8899987 455566666666655555 4567888888775

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.89  E-value=8.3e-22  Score=143.94  Aligned_cols=165  Identities=19%  Similarity=0.224  Sum_probs=112.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++. +.+... +...+++++|+..++++.+.+..                  ....|||+.+++|++   +
T Consensus        46 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d---l  120 (252)
T cd05084          46 ILKQYSHPNIVR-LIGVCT-QKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD---L  120 (252)
T ss_pred             HHHhCCCCCcce-EEEEEc-CCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc---c
Confidence            677788888764 444444 45567889998877777664311                  113477777665555   5


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhc-ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRG-LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +|+||+++.++.+||+|||.+........... ........ |+|||.+..    ..++.++|+||+|+++|+|++ |..
T Consensus       121 ~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~e~~~~~~~  195 (252)
T cd05084         121 AARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVK-WTAPEALNY----GRYSSESDVWSFGILLWEAFSLGAV  195 (252)
T ss_pred             chheEEEcCCCcEEECccccCcccccccccccCCCCCCcee-ecCchhhcC----CCCChHHHHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999876443211000 00111234 999999887    678899999999999999997 899


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. .........+..+.+... +..++..++++++
T Consensus       196 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  230 (252)
T cd05084         196 PYAN-LSNQQTREAIEQGVRLPC-PELCPDAVYRLME  230 (252)
T ss_pred             Cccc-cCHHHHHHHHHcCCCCCC-cccCCHHHHHHHH
Confidence            9976 344444444444444444 4567888888875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=7.1e-22  Score=145.06  Aligned_cols=166  Identities=20%  Similarity=0.224  Sum_probs=113.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~   63 (182)
                      ++++.+.|+|++. +.+... .....++++++...+++.+.+..                 +  ...++|..++   .|+
T Consensus        53 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~  127 (261)
T cd05068          53 QIMKKLRHPKLIQ-LYAVCT-LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY---IHR  127 (261)
T ss_pred             HHHHHCCCCCccc-eeEEEe-cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eec
Confidence            3667788877764 444444 45567889999877777665321                 0  1246776654   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+................... |+|||.+..    ..++.++|+||+|+++|++++ |+
T Consensus       128 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~el~t~g~  202 (261)
T cd05068         128 DLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIK-WTAPEAALY----NRFSIKSDVWSFGILLTEIVTYGR  202 (261)
T ss_pred             cCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCcee-ccCcccccc----CCCCchhhHHHHHHHHHHHHhcCC
Confidence            566999999999999999999987655322210110111234 999999887    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ .........+..+...+. +...++.+.+++.
T Consensus       203 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  238 (261)
T cd05068         203 MPYPG-MTNAEVLQQVDQGYRMPC-PPGCPKELYDIML  238 (261)
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCcCCHHHHHHHH
Confidence            99988 344455555545443333 3457788888775

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=8.3e-22  Score=146.83  Aligned_cols=165  Identities=19%  Similarity=0.243  Sum_probs=115.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------HHHHHHh
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------LRCIYIQ   53 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------~~~~~l~   53 (182)
                      +++.+.|++++ .+.+... +...+++++|+..++++.+.+..                              ....|+|
T Consensus        60 ~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH  137 (288)
T cd05093          60 LLTNLQHEHIV-KFYGVCV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA  137 (288)
T ss_pred             HHHhCCCCCcc-eEEEEEe-cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            56777887665 4444444 45677899998877776544320                              0134777


Q ss_pred             hcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         54 DYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        54 ~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      ..+++|   +|+||+||+++.++.++|+|||.+........ .......++.. |+|||.+..    ..++.++|+||||
T Consensus       138 ~~~i~H---~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDiwslG  209 (288)
T cd05093         138 SQHFVH---RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPESIMY----RKFTTESDVWSLG  209 (288)
T ss_pred             hCCeee---cccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCcccc-ccCHHHhcc----CCCCchhhHHHHH
Confidence            776555   55559999999999999999999875433211 01111233456 999999987    6788999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        133 ISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       133 ~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |++|+|++ |.+||.. ....+....+..+..+.. +..+++++++++.
T Consensus       210 ~il~~l~t~g~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  256 (288)
T cd05093         210 VVLWEIFTYGKQPWYQ-LSNNEVIECITQGRVLQR-PRTCPKEVYDLML  256 (288)
T ss_pred             HHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            99999998 9999987 345555666666654444 4567888888875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0584|consensus

Probab=99.89  E-value=5.9e-23  Score=160.08  Aligned_cols=165  Identities=18%  Similarity=0.230  Sum_probs=132.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +|+-++|+|++.....+.....+.+.+++|....+.|.++.                   .++.  |||.++- .+.|||
T Consensus        94 lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~--yLHs~~P-PIIHRD  170 (632)
T KOG0584|consen   94 LLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLV--YLHSQDP-PIIHRD  170 (632)
T ss_pred             HHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhh--hhhcCCC-Cccccc
Confidence            67889999998777777777778888999999999998863                   3344  6766542 467888


Q ss_pred             CCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||-+||++++. |.|||.|+|+|.....+..  .. .+|||- |||||++..     .|+..+||||||+=+.||.|+..
T Consensus       171 LKCDNIFinG~~G~VKIGDLGLAtl~r~s~a--ks-vIGTPE-FMAPEmYEE-----~YnE~VDVYaFGMCmLEMvT~eY  241 (632)
T KOG0584|consen  171 LKCDNIFVNGNLGEVKIGDLGLATLLRKSHA--KS-VIGTPE-FMAPEMYEE-----NYNELVDVYAFGMCMLEMVTSEY  241 (632)
T ss_pred             cccceEEEcCCcCceeecchhHHHHhhcccc--ce-eccCcc-ccChHHHhh-----hcchhhhhhhhhHHHHHHHhccC
Confidence            88999999887 8999999999987665443  23 789999 999999874     89999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+.-..+.+++.++.+|..|---..---+++++||.
T Consensus       242 PYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIe  278 (632)
T KOG0584|consen  242 PYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIE  278 (632)
T ss_pred             ChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHH
Confidence            9998788888888899987552212222478888875

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=3.1e-22  Score=152.11  Aligned_cols=137  Identities=16%  Similarity=0.145  Sum_probs=94.2

Q ss_pred             HHHHhCCCCcEEEEEEeeec---CCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT---DDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++.....+...   +...+++++|++. +++.+.+..                 .+..|||+.+++|   +
T Consensus        52 ~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH---~  127 (338)
T cd07859          52 LLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFH---R  127 (338)
T ss_pred             HHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeec---C
Confidence            57778888876443322221   2235789999885 455443210                 1234787776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+||+||+++.++.+||+|||++........  .......++.. |+|||++....  ..++.++|+||+||++|+|++|
T Consensus       128 dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~~~--~~~~~~~DvwSlGvvl~el~tg  204 (338)
T cd07859         128 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW-YRAPELCGSFF--SKYTPAIDIWSIGCIFAEVLTG  204 (338)
T ss_pred             CCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCC-cCCHHHHhccc--cccCchhHHHHHHHHHHHHHcC
Confidence            5569999999999999999999875432211  01122467778 99999876411  3577899999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      ++||.+
T Consensus       205 ~~pf~~  210 (338)
T cd07859         205 KPLFPG  210 (338)
T ss_pred             CCCCCC
Confidence            999987

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.89  E-value=1e-21  Score=143.22  Aligned_cols=165  Identities=19%  Similarity=0.219  Sum_probs=113.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++. +.++.. +....++++|+...+++.+.+..                  ....++|+.+++|   +|+
T Consensus        45 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H---~dl  119 (250)
T cd05085          45 ILKQYDHPNIVK-LIGVCT-QRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIH---RDL  119 (250)
T ss_pred             HHHhCCCCCcCe-EEEEEe-cCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee---ccc
Confidence            566777877654 444544 44567899999877777664321                  1134777766555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      +|+||+++.++.++|+|||++...............++.. |+|||.+..    ..++.++|+||+|+++|++++ |..|
T Consensus       120 ~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~ll~~~~~~g~~p  194 (250)
T cd05085         120 AARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK-WTAPEALNY----GRYSSESDVWSYGILLWETFSLGVCP  194 (250)
T ss_pred             ChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc-ccCHHHhcc----CCCCchhHHHHHHHHHHHHhcCCCCC
Confidence            5999999999999999999986543332211111223345 999999887    677889999999999999998 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |.+. ........+..+..... +..++..+.+++.
T Consensus       195 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  228 (250)
T cd05085         195 YPGM-TNQQAREQVEKGYRMSC-PQKCPDDVYKVMQ  228 (250)
T ss_pred             CCCC-CHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            9873 44444455555544444 4457888888775

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.89  E-value=8.2e-22  Score=144.99  Aligned_cols=165  Identities=21%  Similarity=0.240  Sum_probs=112.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.+.|+|++.. ....  .....++++++...+++.+.+..                   ....++|+.+++|   +
T Consensus        53 ~~l~~l~~~~i~~~-~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H---~  126 (262)
T cd05071          53 QVMKKLRHEKLVQL-YAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH---R  126 (262)
T ss_pred             HHHHhCCCCCcceE-EEEE--CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccc---c
Confidence            36777888777644 3333  33457889998887776654321                   0124777766555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+...............++.. |++||....    ..++.++|+||+|+++|++++ |.
T Consensus       127 dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~DvwslG~~l~ellt~g~  201 (262)
T cd05071         127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALY----GRFTIKSDVWSFGILLTELTTKGR  201 (262)
T ss_pred             ccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccce-ecCHhHhcc----CCCCchhhHHHHHHHHHHHHcCCC
Confidence            556999999999999999999987654332211111233445 999998877    678899999999999999999 89


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||.+ ....+....+..+...+. +..+++.+.+++.
T Consensus       202 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  237 (262)
T cd05071         202 VPYPG-MVNREVLDQVERGYRMPC-PPECPESLHDLMC  237 (262)
T ss_pred             CCCCC-CChHHHHHHHhcCCCCCC-ccccCHHHHHHHH
Confidence            99987 344455555555544434 3456777777765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.89  E-value=8.2e-22  Score=146.73  Aligned_cols=164  Identities=13%  Similarity=0.123  Sum_probs=111.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|++++.....+ . ++..+++++++..++++...+..                   ....|+|+.+++|   +
T Consensus        52 ~il~~l~~~~i~~~~~~~-~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH---~  126 (285)
T cd05632          52 QILEKVNSQFVVNLAYAY-E-TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVY---R  126 (285)
T ss_pred             HHHHHcCCcCceeEEEEE-e-cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee---c
Confidence            467788888776543333 3 34567888888877766543210                   1134777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||++........  .....++.. |+|||.+..    ..++.++|+||+|+++|++++|..
T Consensus       127 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~g~~~-~~aPE~~~~----~~~~~~~Di~slG~~l~~l~~g~~  199 (285)
T cd05632         127 DLKPENILLDDYGHIRISDLGLAVKIPEGES--IRGRVGTVG-YMAPEVLNN----QRYTLSPDYWGLGCLIYEMIEGQS  199 (285)
T ss_pred             CCCHHHEEECCCCCEEEecCCcceecCCCCc--ccCCCCCcC-ccChHHhcC----CCCCcccchHHHHHHHHHHHhCCC
Confidence            5559999999999999999998865433222  122456777 999999987    678899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHH---hhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQV---VQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i---~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+. ........+   .......+ +..+++++.+++.
T Consensus       200 P~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  237 (285)
T cd05632         200 PFRGR-KEKVKREEVDRRVLETEEVY-SAKFSEEAKSICK  237 (285)
T ss_pred             CCCCC-CHHHHHHHHHHhhhcccccc-CccCCHHHHHHHH
Confidence            99873 332222222   22222333 3457788888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.89  E-value=3.9e-22  Score=165.21  Aligned_cols=166  Identities=16%  Similarity=0.104  Sum_probs=109.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------------HHHHHHhhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------------LRCIYIQDY   55 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------------~~~~~l~~~   55 (182)
                      +++.++|+|++.. .+... +....+++|++..++++.+.+..                            ...+|+|+.
T Consensus        55 ILs~L~HPNIVkl-~~v~~-d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~  132 (932)
T PRK13184         55 IAADLIHPGIVPV-YSICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK  132 (932)
T ss_pred             HHHhCCCcCcCeE-EEEEe-eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC
Confidence            5667788777644 44444 45568899999888777654321                            012477777


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-----------------hhcccCCCCCCcccCccccCCCCC
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-----------------IRGLYGADCDPNFIRPERIDPSGN  118 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-----------------~~~~~~~~~~~~~~aPe~~~~~~~  118 (182)
                      +++   |+|+||+||+++.++.++|+|||++........                 ......+|++. |+|||.+.+   
T Consensus       133 GII---HRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~-YmAPE~l~g---  205 (932)
T PRK13184        133 GVL---HRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPD-YMAPERLLG---  205 (932)
T ss_pred             Ccc---ccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCC-CCCHHHhcC---
Confidence            655   455559999999999999999999876521100                 00111467888 999999987   


Q ss_pred             CCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCC-CCCCCCHHHHHHhh
Q psy17162        119 PSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL-PPGEFSSDFKDFIT  180 (182)
Q Consensus       119 ~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~~~~i~  180 (182)
                       ..++.++|+||+||++|+|++|..||.. ..............+... +...+|+.+.+++.
T Consensus       206 -~~~S~kSDIWSLGVILyELLTG~~PF~~-~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~  266 (932)
T PRK13184        206 -VPASESTDIYALGVILYQMLTLSFPYRR-KKGRKISYRDVILSPIEVAPYREIPPFLSQIAM  266 (932)
T ss_pred             -CCCCcHhHHHHHHHHHHHHHHCCCCCCC-cchhhhhhhhhccChhhccccccCCHHHHHHHH
Confidence             6788999999999999999999999977 232222222111111111 12356777777664

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=9.5e-22  Score=145.79  Aligned_cols=169  Identities=21%  Similarity=0.317  Sum_probs=116.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++ .+.+... +...+++++|+..++++.+.+..                  ....|||+.+++|   +|+
T Consensus        55 ~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h---~dl  129 (280)
T cd06611          55 ILSECKHPNIV-GLYEAYF-YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIH---RDL  129 (280)
T ss_pred             HHHhCCCCcee-EEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCC
Confidence            56778876655 4444444 45678899999888776554321                  1134777776655   556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |++||.+.... ....++.++|+||+|+++|+|++|.+|
T Consensus       130 ~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p  207 (280)
T cd06611         130 KAGNILLTLDGDVKLADFGVSAKNKSTLQK-RDTFIGTPY-WMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP  207 (280)
T ss_pred             ChhhEEECCCCCEEEccCccchhhcccccc-cceeecchh-hcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            699999999999999999987654332221 122456777 99999875311 113567889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      |.+ ........++..+..+.+. +..++.++.++++
T Consensus       208 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (280)
T cd06611         208 HHE-LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLK  243 (280)
T ss_pred             ccc-CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHH
Confidence            987 3444555555555544443 4468888888876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=6.5e-22  Score=148.81  Aligned_cols=132  Identities=17%  Similarity=0.183  Sum_probs=94.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++.. .+... +....++++|+... ++.+.                    +.+  ..|||+.+++|   
T Consensus        56 ~~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a--L~~lH~~~ivH---  127 (309)
T cd07872          56 SLLKDLKHANIVTL-HDIVH-TDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRG--LAYCHRRKVLH---  127 (309)
T ss_pred             HHHHhCCCCCcceE-EEEEe-eCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHHCCeec---
Confidence            35677888777644 44444 34567889988764 33332                    222  34787776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+||++|+|++|+
T Consensus       128 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~il~el~tg~  202 (309)
T cd07872         128 RDLKPQNLLINERGELKLADFGLARAKSVPTKT-YSNEVVTLW-YRPPDVLLG---SSEYSTQIDMWGVGCIFFEMASGR  202 (309)
T ss_pred             CCCCHHHEEECCCCCEEECccccceecCCCccc-ccccccccc-ccCCHHHhC---CCCCCcHHHHHHHHHHHHHHHhCC
Confidence            555599999999999999999998654332221 122456677 999998865   145778999999999999999999


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      +||.+
T Consensus       203 ~pf~~  207 (309)
T cd07872         203 PLFPG  207 (309)
T ss_pred             CCCCC
Confidence            99987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.89  E-value=8.5e-22  Score=144.43  Aligned_cols=165  Identities=18%  Similarity=0.181  Sum_probs=113.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++ .+.+... +...+++++|+...+.+.+.+..                  ....|||+.++.   |+|+
T Consensus        52 ~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~---H~dl  126 (256)
T cd05113          52 VMMKLSHEKLV-QLYGVCT-KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI---HRDL  126 (256)
T ss_pred             HHhcCCCCCee-eEEEEEc-cCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee---cccc
Confidence            56677777665 4555544 44567899998777666554311                  012477777654   4556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      ||+||+++.++.+||+|||.+.....+.........++.. |++||.+..    ..++.++|+||+|+++|+|++ |..|
T Consensus       127 ~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~-y~~pe~~~~----~~~~~~~Di~slG~~l~~l~~~g~~p  201 (256)
T cd05113         127 AARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLLY----SKFSSKSDVWAFGVLMWEVYSLGKMP  201 (256)
T ss_pred             CcceEEEcCCCCEEECCCccceecCCCceeecCCCccChh-hCCHHHHhc----CcccchhHHHHHHHHHHHHhcCCCCC
Confidence            6999999999999999999987654432211111223345 999999987    678899999999999999998 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |.. ....+....+..+..+.. +...++.+++++.
T Consensus       202 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  235 (256)
T cd05113         202 YER-FNNSETVEKVSQGLRLYR-PHLASEKVYAIMY  235 (256)
T ss_pred             cCc-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            987 344455556666654444 4556788888765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.89  E-value=8.8e-22  Score=145.26  Aligned_cols=164  Identities=18%  Similarity=0.246  Sum_probs=113.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++.. .+...  ....++++++...+++.+.+..                  ....++|+.+++   |+|+
T Consensus        60 ~l~~~~h~~i~~~-~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~---H~dl  133 (270)
T cd05056          60 IMRQFDHPHIVKL-IGVIT--ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFV---HRDI  133 (270)
T ss_pred             HHHhCCCCchhce-eEEEc--CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee---cccc
Confidence            6677888776644 44443  3446788898877777665321                  012477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      ||+||+++.++.++|+|||++...........+...+... |+|||.+..    ..++.++|+||+|+++|++++ |..|
T Consensus       134 ~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         134 AARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIK-WMAPESINF----RRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             ChheEEEecCCCeEEccCceeeecccccceecCCCCcccc-ccChhhhcc----CCCCchhhhHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999987654432211111223345 999999876    678899999999999999986 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |.+ ....+....+..+..++. +..+|+++++++.
T Consensus       209 f~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  242 (270)
T cd05056         209 FQG-VKNNDVIGRIENGERLPM-PPNCPPTLYSLMT  242 (270)
T ss_pred             CCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            987 344455555656655555 4567888888775

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.89  E-value=1.4e-21  Score=145.80  Aligned_cols=162  Identities=19%  Similarity=0.285  Sum_probs=115.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|+|++. +.+... +...+++++|+..++++.+.+..                 ....++|..+++   |+|+
T Consensus        53 ~~l~~l~h~~i~~-~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~---H~dl  127 (290)
T cd05580          53 RILQSIRHPFLVN-LYGSFQ-DDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIV---YRDL  127 (290)
T ss_pred             HHHHhCCCCCccc-eeeEEE-cCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEe---cCCC
Confidence            3577788877664 444444 45678899999988777664311                 112367776554   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|.||+++.++.+||+|||++.......    ....++.. |+|||.+.+    ...+.++|+||+|+++|+|++|..||
T Consensus       128 ~p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~  198 (290)
T cd05580         128 KPENLLLDSDGYIKITDFGFAKRVKGRT----YTLCGTPE-YLAPEIILS----KGYGKAVDWWALGILIYEMLAGYPPF  198 (290)
T ss_pred             CHHHEEECCCCCEEEeeCCCccccCCCC----CCCCCCcc-ccChhhhcC----CCCCccccHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999987754431    22456777 999999877    66778999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .........+..+ .+.+ +..+++.+++++++
T Consensus       199 ~~-~~~~~~~~~~~~~-~~~~-~~~~~~~l~~li~~  231 (290)
T cd05580         199 FD-DNPIQIYEKILEG-KVRF-PSFFSPDAKDLIRN  231 (290)
T ss_pred             CC-CCHHHHHHHHhcC-CccC-CccCCHHHHHHHHH
Confidence            87 3444444444444 3555 44578888888753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.89  E-value=6.4e-22  Score=149.32  Aligned_cols=165  Identities=18%  Similarity=0.146  Sum_probs=107.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++..+ .....  ...++++++...+++.+.+..                  ....|||+.+++|   +|
T Consensus        61 ~~l~~l~h~niv~~~-g~~~~--~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH---~d  134 (316)
T cd05108          61 YVMASVDNPHVCRLL-GICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVH---RD  134 (316)
T ss_pred             HHHHhCCCCCCCeEE-EEEcC--CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeec---cc
Confidence            367778888887544 33332  235677777776666554311                  1134788776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      +||+||+++.++.+||+|||+++......... ......+.. |++||.+..    ..++.++|+||||+++|++++ |.
T Consensus       135 lkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~-y~apE~~~~----~~~~~~~Di~slGv~l~el~t~g~  209 (316)
T cd05108         135 LAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIK-WMALESILH----RIYTHQSDVWSYGVTVWELMTFGS  209 (316)
T ss_pred             cchhheEecCCCcEEEccccccccccCCCcceeccCCcccee-ecChHHhcc----CCCCchhhhHHHHHHHHHHHcCCC
Confidence            55999999999999999999997754332211 111222345 999999987    778899999999999999997 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. +..++.++.+++.
T Consensus       210 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  245 (316)
T cd05108         210 KPYDG-IPASEISSILEKGERLPQ-PPICTIDVYMIMV  245 (316)
T ss_pred             CCCCC-CCHHHHHHHHhCCCCCCC-CCCCCHHHHHHHH
Confidence            99987 333333332333443444 3446666666653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.1e-21  Score=143.67  Aligned_cols=166  Identities=19%  Similarity=0.209  Sum_probs=113.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|++++. +.++..  ...+++++++...+++.+.+..                 ....+||..++   .|+|+
T Consensus        48 ~~l~~l~h~~iv~-~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i---~H~di  121 (257)
T cd05060          48 SVMAQLDHPCIVR-LIGVCK--GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF---VHRDL  121 (257)
T ss_pred             HHHHhcCCCCeee-EEEEEc--CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe---eccCc
Confidence            3667778877654 344433  4457889998877777664421                 11247777665   45566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc--cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL--YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||.+............  ...++.. |+|||.+..    ..++.++|+||+|+++|++++ |.
T Consensus       122 ~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~~~~~g~  196 (257)
T cd05060         122 AARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLK-WYAPECINY----GKFSSKSDVWSYGVTLWEAFSYGA  196 (257)
T ss_pred             ccceEEEcCCCcEEeccccccceeecCCcccccccCcccccc-ccCHHHhcC----CCCCccchHHHHHHHHHHHHcCCC
Confidence            699999999999999999998765433221111  0112234 999999887    678899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +||.. ....+....+..+.+.+. +..+++.+++++.+
T Consensus       197 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  233 (257)
T cd05060         197 KPYGE-MKGAEVIAMLESGERLPR-PEECPQEIYSIMLS  233 (257)
T ss_pred             CCccc-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHH
Confidence            99987 344444444544543333 45678888888753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.88  E-value=1.3e-21  Score=143.73  Aligned_cols=165  Identities=19%  Similarity=0.276  Sum_probs=112.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+.|+|++... .....  ...++++++...+++.+.+..                 +  ...++|..++   .|+
T Consensus        53 ~~l~~l~~~~i~~~~-~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~  126 (260)
T cd05073          53 NVMKTLQHDKLVKLH-AVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHR  126 (260)
T ss_pred             HHHHhcCCCCcceEE-EEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc---ccc
Confidence            367888888876553 33332  567889999887777654321                 1  1247776655   455


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |++|+||+++.++.++|+|||.+...............++.. |+|||.+..    ..++.++|+||+|+++|++++ |.
T Consensus       127 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~~l~~l~t~g~  201 (260)
T cd05073         127 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINF----GSFTIKSDVWSFGILLMEIVTYGR  201 (260)
T ss_pred             ccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCccccc-ccCHhHhcc----CCcCccccchHHHHHHHHHHhcCC
Confidence            556999999999999999999887654322211111223445 999999887    677889999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+. ...+....+..+...+. +...+.++.+++.
T Consensus       202 ~p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  237 (260)
T cd05073         202 IPYPGM-SNPEVIRALERGYRMPR-PENCPEELYNIMM  237 (260)
T ss_pred             CCCCCC-CHHHHHHHHhCCCCCCC-cccCCHHHHHHHH
Confidence            999873 44344444444443333 3467788888775

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.88  E-value=1.2e-21  Score=146.09  Aligned_cols=165  Identities=17%  Similarity=0.195  Sum_probs=112.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------------------
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------------------   46 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------------------   46 (182)
                      +++.+.|+|++.. .+... .....++++++..++++.+.+..                                     
T Consensus        56 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  133 (290)
T cd05045          56 LLKQVNHPHVIKL-YGACS-QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFA  133 (290)
T ss_pred             HHhhCCCCCEeeE-EEEEe-cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHH
Confidence            5677888877654 44444 34557788888887776654321                                     


Q ss_pred             ----HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCC
Q psy17162         47 ----LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        47 ----~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                          ....|||+.+++|   +|+||+||+++.++.+||+|||.+......... ......++.. |+|||.+..    ..
T Consensus       134 ~~i~~~l~~LH~~~ivH---~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~apE~~~~----~~  205 (290)
T cd05045         134 WQISRGMQYLAEMKLVH---RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVK-WMAIESLFD----HI  205 (290)
T ss_pred             HHHHHHHHHHHHCCeeh---hhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCcc-ccCHHHHcc----CC
Confidence                1124777776555   555599999999999999999998754322211 1111233445 999999877    67


Q ss_pred             CCccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ++.++|+||+|+++|+|++ |..||.+ ..+......+..+..++. +..++.++++++.
T Consensus       206 ~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  263 (290)
T cd05045         206 YTTQSDVWSFGVLLWEIVTLGGNPYPG-IAPERLFNLLKTGYRMER-PENCSEEMYNLML  263 (290)
T ss_pred             cchHhHHHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHhCCCCCCC-CCCCCHHHHHHHH
Confidence            8899999999999999998 9999987 344444444444443433 5567888888875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.88  E-value=2e-22  Score=151.95  Aligned_cols=136  Identities=13%  Similarity=0.110  Sum_probs=95.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccch---------------------------HHHHHHHHHHHHHhhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEK---------------------------VQKELETLRCIYIQDY   55 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------l~~~l~~~~~~~l~~~   55 (182)
                      .+++.++|+|++.....+....+..+++++++.....                           +.|.+.++.  |||+.
T Consensus        50 ~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~--~LH~~  127 (317)
T cd07868          50 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH--YLHAN  127 (317)
T ss_pred             HHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHH--HHHhC
Confidence            3678899998876555444445666778888754311                           112233444  88887


Q ss_pred             chhcccccCCCCCcEEE----cCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         56 HLCVRSTRYFSVDTFHQ----RLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~----~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      +++|+   |+||+||++    +.++.+||+|||++.........  ......++.. |+|||++.+   ...++.++|+|
T Consensus       128 ~ivHr---Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~---~~~~~~~~Diw  200 (317)
T cd07868         128 WVLHR---DLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW-YRAPELLLG---ARHYTKAIDIW  200 (317)
T ss_pred             CEEcC---CCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCcccccc-ccCCHHHcC---CCCcCchhhHH
Confidence            75555   555999999    45578999999999765432211  1122567777 999999875   13478899999


Q ss_pred             HHHHHHHHHHhCCCCCCC
Q psy17162        130 SLGISLIELATGRFPYDT  147 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~  147 (182)
                      |+||++|+|++|++||.+
T Consensus       201 slG~il~el~~g~~~f~~  218 (317)
T cd07868         201 AIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             HHHHHHHHHHhCCCCccC
Confidence            999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.88  E-value=1.1e-21  Score=145.68  Aligned_cols=167  Identities=17%  Similarity=0.235  Sum_probs=113.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------H--HHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------L--RCI   50 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------~--~~~   50 (182)
                      .+++.+.|+|++.. .+... +....++++++...+++.+.+..                              +  ...
T Consensus        59 ~~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~  136 (280)
T cd05092          59 ELLTVLQHQHIVRF-YGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMV  136 (280)
T ss_pred             HHHhcCCCCCCceE-EEEEe-cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHH
Confidence            35677888777644 34443 34557788888766655433210                              0  134


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |||+.+++|+   |+||+||+++.++.++|+|||++......... ......++.. |+|||.+..    ..++.++|+|
T Consensus       137 ~LH~~~i~H~---dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~  208 (280)
T cd05092         137 YLASLHFVHR---DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILY----RKFTTESDIW  208 (280)
T ss_pred             HHHHCCeecc---cccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCcccccc-ccCHHHhcc----CCcCchhhHH
Confidence            8887776554   55599999999999999999988654322110 0111223455 999999887    6788999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||||++|+|++ |.+||.. ....+....+..+..+.. +..+|+.+++++.+
T Consensus       209 slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  259 (280)
T cd05092         209 SFGVVLWEIFTYGKQPWYQ-LSNTEAIECITQGRELER-PRTCPPEVYAIMQG  259 (280)
T ss_pred             HHHHHHHHHHcCCCCCCcc-CCHHHHHHHHHcCccCCC-CCCCCHHHHHHHHH
Confidence            99999999998 9999977 345455555555554444 45688889888753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.88  E-value=1.7e-21  Score=148.07  Aligned_cols=166  Identities=16%  Similarity=0.224  Sum_probs=112.5

Q ss_pred             hHHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HH
Q psy17162          3 SIRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LR   48 (182)
Q Consensus         3 ~il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~   48 (182)
                      .+++.+ +|+|++ .+.+... ....+++++++...+++.+.+..                                 ..
T Consensus        69 ~~l~~l~~h~~iv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  146 (334)
T cd05100          69 EMMKMIGKHKNII-NLLGACT-QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARG  146 (334)
T ss_pred             HHHHhhcCCCCee-eeeEEEc-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHH
Confidence            356667 566555 4555544 44568889998877776554321                                 01


Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccch
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSD  127 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~D  127 (182)
                      ..|||..+++|   +|+||+||+++.++.+||+|||+++......... .....++.. |+|||++..    ..++.++|
T Consensus       147 l~~LH~~givH---~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~D  218 (334)
T cd05100         147 MEYLASQKCIH---RDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVK-WMAPEALFD----RVYTHQSD  218 (334)
T ss_pred             HHHHHHCCeec---cccccceEEEcCCCcEEECCcccceecccccccccccCCCcCce-EcCHHHhcc----CCcCchhh
Confidence            24788776555   5555999999999999999999987654322111 111222345 999999987    67889999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        128 VWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       128 iwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||+|+++|+|++ |..||.+ ....+....+..+..+.. +...+.++.+++.
T Consensus       219 i~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  270 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDK-PANCTHELYMIMR  270 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            9999999999998 8999987 344444444555544444 4456778877765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.88  E-value=1.2e-21  Score=143.53  Aligned_cols=170  Identities=15%  Similarity=0.205  Sum_probs=118.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcc--hhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYH--LCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~--~~h   59 (182)
                      .+++.+.|+|++.............+++++|+...+++.+.+...                     ...++|..+  ...
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~  130 (265)
T cd08217          51 NILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT  130 (265)
T ss_pred             HHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc
Confidence            356777888876544434444556678999998877665443210                     123666222  333


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      +.|+|++|+||+++.++.+||+|||.+............ ..++.. |+|||.+..    ..++.++|+||+|+++|+|+
T Consensus       131 i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~-~~~~~~-~~~pE~~~~----~~~~~~~Dv~slG~il~~l~  204 (265)
T cd08217         131 VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT-YVGTPY-YMSPEQLNH----MSYDEKSDIWSLGCLIYELC  204 (265)
T ss_pred             ceecCCCHHHEEEecCCCEEEecccccccccCCcccccc-cccCCC-ccChhhhcC----CCCCchhHHHHHHHHHHHHH
Confidence            555666699999999999999999998776543321122 456777 999999987    67788999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|+.||.. .........+..+..+.+ +..+++.+.++++
T Consensus       205 ~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  243 (265)
T cd08217         205 ALSPPFTA-RNQLQLASKIKEGKFRRI-PYRYSSELNEVIK  243 (265)
T ss_pred             HCCCcccC-cCHHHHHHHHhcCCCCCC-ccccCHHHHHHHH
Confidence            99999987 344444444555555555 4567888888875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.88  E-value=2e-21  Score=144.91  Aligned_cols=171  Identities=22%  Similarity=0.306  Sum_probs=111.4

Q ss_pred             HHHHh-CCCCcEEEEEEeeecC---CCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchh
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTD---DKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~   58 (182)
                      +++.+ +|+|++.....+...+   ...+++++++..++++.+.+..                     ....++|..++ 
T Consensus        71 ~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-  149 (291)
T cd06639          71 ILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI-  149 (291)
T ss_pred             HHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-
Confidence            44555 5666654433333222   2457899999887776553321                     01236666655 


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l~~  137 (182)
                        .|+|+||+||+++.++.+||+|||.+......... .....++.. |+|||.+..... ...++.++|+||+||++|+
T Consensus       150 --vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~e  225 (291)
T cd06639         150 --IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-RNTSVGTPF-WMAPEVIACEQQYDYSYDARCDVWSLGITAIE  225 (291)
T ss_pred             --eccCCCHHHEEEcCCCCEEEeecccchhccccccc-ccCccCCcc-ccChhhhcCCCCcccccCCccchHHHHHHHHH
Confidence              45556699999999999999999998765433221 122456667 999998764110 0235789999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      |++|++||.. ..+...+..+..+..+.+. +..++..+++++.
T Consensus       226 l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  268 (291)
T cd06639         226 LGDGDPPLFD-MHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFIS  268 (291)
T ss_pred             HhhCCCCCCC-CcHHHHHHHHhcCCCCCCCcccccCHHHHHHHH
Confidence            9999999987 3444555555555444332 3356778888775

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.88  E-value=1.1e-21  Score=145.63  Aligned_cols=162  Identities=15%  Similarity=0.144  Sum_probs=108.0

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCCC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++.+.|+|++.. .++.  .....+.++++...+++.+.+..                  ....|+|+.+++|   +|+|
T Consensus        63 l~~l~h~~iv~~-~~~~--~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH---~dlk  136 (279)
T cd05111          63 MGSLDHAYIVRL-LGIC--PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVH---RNLA  136 (279)
T ss_pred             HhcCCCCCcceE-EEEE--CCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEec---cccC
Confidence            455678776644 4443  34456778888887777765421                  1235788776555   5566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      |+||+++.++.+||+|||.++........ ......++.. |++||.+..    ..++.++|+||||+++|++++ |..|
T Consensus       137 p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~~pE~~~~----~~~~~~~Dv~slG~il~el~t~g~~p  211 (279)
T cd05111         137 ARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIK-WMALESILF----GRYTHQSDVWSYGVTVWEMMSYGAEP  211 (279)
T ss_pred             cceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCccc-ccCHHHhcc----CCcCchhhHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999998765332211 1121334455 999999987    678899999999999999998 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i  179 (182)
                      |.+ ..+......+..+..++. +..++..+.+++
T Consensus       212 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li  244 (279)
T cd05111         212 YAG-MRPHEVPDLLEKGERLAQ-PQICTIDVYMVM  244 (279)
T ss_pred             CCC-CCHHHHHHHHHCCCcCCC-CCCCCHHHHHHH
Confidence            987 344333333334443333 444566666655

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.88  E-value=1.4e-21  Score=143.89  Aligned_cols=166  Identities=17%  Similarity=0.252  Sum_probs=114.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++... +... +....++++++...+++.+.+..                     ....|+|+.+++|   
T Consensus        55 ~l~~l~h~~i~~~~-~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H---  129 (267)
T cd08228          55 LLKQLNHPNVIKYL-DSFI-EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH---  129 (267)
T ss_pred             HHHhCCCcceeeee-eeEE-ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeC---
Confidence            56677887776543 3333 34567788888777666543210                     0134777776655   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++|+|||.+............ ..++.. |+|||.+..    ..++.++|+||+|+++|+|++|.
T Consensus       130 ~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~-~~aPE~~~~----~~~~~~~Di~slG~~l~el~~g~  203 (267)
T cd08228         130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPY-YMSPERIHE----NGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             CCCCHHHEEEcCCCCEEECccccceeccchhHHHhc-CCCCcc-ccChhhhcc----CCCCchhhHHHHHHHHHHHhcCC
Confidence            555699999999999999999998776543321122 456667 999999887    66788999999999999999999


Q ss_pred             CCCCCCCCc-HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSP-FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||...... ......+.....++.++...+..++++++
T Consensus       204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08228         204 SPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVS  242 (267)
T ss_pred             CCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence            999763322 33334444445555555567888888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.88  E-value=1.7e-21  Score=143.35  Aligned_cols=165  Identities=16%  Similarity=0.270  Sum_probs=115.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|+|++. +.+... +....++++++..++++.+.+..                 ...+++|+.+++   |+|++
T Consensus        59 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~iv---H~di~  133 (267)
T cd06628          59 LLKELQHENIVQ-YLGSSL-DADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGII---HRDIK  133 (267)
T ss_pred             HHHhcCCCCeee-EEEEEE-eCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcc---cccCC
Confidence            567788877654 444444 34567788898877776554311                 113477777655   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhh-----hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLII-----RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+||+++.++.++|+|||.+.........     ......++.. |+|||.+..    ..++.++|+||+|+++|+|++|
T Consensus       134 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~pe~~~~----~~~~~~~Dv~slG~il~~l~~g  208 (267)
T cd06628         134 GANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVF-WMAPEVVKQ----TSYTRKADIWSLGCLVVEMLTG  208 (267)
T ss_pred             HHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcC-ccChhHhcc----CCCCchhhhHHHHHHHHHHhhC
Confidence            99999999999999999998766432110     0111346667 999999887    6778899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +.||.+. .....+..+.....+.+ +..++.+++++++
T Consensus       209 ~~p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  245 (267)
T cd06628         209 KHPFPDC-TQLQAIFKIGENASPEI-PSNISSEAIDFLE  245 (267)
T ss_pred             CCCCCCc-cHHHHHHHHhccCCCcC-CcccCHHHHHHHH
Confidence            9999873 44444555545555555 4567888888876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.88  E-value=1.6e-21  Score=142.60  Aligned_cols=165  Identities=19%  Similarity=0.219  Sum_probs=116.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH--------------------------HHHHHhhcch
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL--------------------------RCIYIQDYHL   57 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------------------~~~~l~~~~~   57 (182)
                      +++.++|++++. +.+... +...+++++++...+++.+.+...                          +..+||..++
T Consensus        49 ~l~~~~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  126 (262)
T cd00192          49 VMKKLGHPNVVR-LLGVCT-EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF  126 (262)
T ss_pred             HHhhcCCCChhe-eeeeec-CCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence            566778766654 444444 367788999998777766654321                          1246777655


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      +|   +|++|+||+++.++.++|+|||.+........ .......++.. |+|||.+..    ..++.++|+||+|+++|
T Consensus       127 ~H---~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~  198 (262)
T cd00192         127 VH---RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR-WMAPESLKD----GIFTSKSDVWSFGVLLW  198 (262)
T ss_pred             cc---CccCcceEEECCCCcEEEcccccccccccccccccccCCCcCcc-ccCHHHhcc----CCcchhhccHHHHHHHH
Confidence            55   55559999999999999999999877654321 00111345556 999999887    67889999999999999


Q ss_pred             HHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        137 ELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       137 ~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|++ |..||.+ ....+....+..+..... +..+|+++.+++.
T Consensus       199 ~l~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  241 (262)
T cd00192         199 EIFTLGATPYPG-LSNEEVLEYLRKGYRLPK-PEYCPDELYELML  241 (262)
T ss_pred             HHHhcCCCCCCC-CCHHHHHHHHHcCCCCCC-CccCChHHHHHHH
Confidence            9999 6999988 355555555555555555 4567888888775

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.88  E-value=1.8e-21  Score=143.65  Aligned_cols=158  Identities=17%  Similarity=0.173  Sum_probs=108.6

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      ...+.+++.+.+.... ...+++++|+..++++.+.+..                 ....++|+.+++|   +|++|+||
T Consensus        65 ~~~h~~iv~~~~~~~~-~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H---~dl~p~ni  140 (267)
T PHA03390         65 MKDNPNFIKLYYSVTT-LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIH---NDIKLENV  140 (267)
T ss_pred             hhcCCCEEEEEEEEec-CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee---CCCCHHHE
Confidence            3334455555555553 4478899999888888765421                 0124777776555   55559999


Q ss_pred             EEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q psy17162         71 HQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG  149 (182)
Q Consensus        71 l~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~  149 (182)
                      +++.++ .++|+|||.+........     ..++.. |+|||++..    ..++.++|+||+|+++|+|++|..||....
T Consensus       141 l~~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~il~~l~~g~~p~~~~~  210 (267)
T PHA03390        141 LYDRAKDRIYLCDYGLCKIIGTPSC-----YDGTLD-YFSPEKIKG----HNYDVSFDWWAVGVLTYELLTGKHPFKEDE  210 (267)
T ss_pred             EEeCCCCeEEEecCccceecCCCcc-----CCCCCc-ccChhhhcC----CCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            999988 999999998876543322     456666 999999987    678899999999999999999999997632


Q ss_pred             CcH---HHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        150 SPF---EQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       150 ~~~---~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ...   ..+.... ....+. +..+|+.+++++.+
T Consensus       211 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~li~~  243 (267)
T PHA03390        211 DEELDLESLLKRQ-QKKLPF-IKNVSKNANDFVQS  243 (267)
T ss_pred             cchhhHHHHHHhh-cccCCc-ccccCHHHHHHHHH
Confidence            211   1222222 222223 34688999998864

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.1e-21  Score=142.48  Aligned_cols=166  Identities=20%  Similarity=0.255  Sum_probs=115.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.++|+|++.. .+... +...+++++++...+++.+.+..                   ....++|..+++|   +
T Consensus        53 ~~l~~l~h~~i~~~-~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h---~  127 (261)
T cd05034          53 QIMKKLRHDKLVQL-YAVCS-EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIH---R  127 (261)
T ss_pred             HHHhhCCCCCEeee-eeeee-cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCccc---C
Confidence            36777888776644 44433 44567889998877776554311                   1124777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+................+.. |+|||.+.+    ..++.++|+||+|+++|++++ |+
T Consensus       128 di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~il~~l~t~g~  202 (261)
T cd05034         128 DLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIK-WTAPEAANY----GRFTIKSDVWSFGILLTEIVTYGR  202 (261)
T ss_pred             CcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCcc-ccCHHHhcc----CCcCchhHHHHHHHHHHHHHhCCC
Confidence            566999999999999999999987665332211111223345 999999887    678899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ .........+..+...+. +...+.++++++.
T Consensus       203 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  238 (261)
T cd05034         203 VPYPG-MTNREVLEQVERGYRMPR-PPNCPEELYDLML  238 (261)
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99987 355555666655544444 3446788888765

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.88  E-value=1.2e-21  Score=145.22  Aligned_cols=164  Identities=25%  Similarity=0.330  Sum_probs=114.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|++++.... ... ++..+++++|+..++++.+.+..                ....++|+.+++|.   |++|
T Consensus        55 ~l~~l~h~~i~~~~~-~~~-~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~---dl~p  129 (277)
T cd06640          55 VLSQCDSPYVTKYYG-SYL-KGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR---DIKA  129 (277)
T ss_pred             HHHhCCCCCEeeEEE-EEE-ECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCc---CCCh
Confidence            556677776664444 333 45678899999988887764321                11347777766554   5559


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++++|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|++||..
T Consensus       130 ~Nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~apE~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~  203 (277)
T cd06640         130 ANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPF-WMAPEVIQQ----SAYDSKADIWSLGITAIELAKGEPPNSD  203 (277)
T ss_pred             hhEEEcCCCCEEEcccccceeccCCccc-cccccCccc-ccCHhHhcc----CCCccHHHHHHHHHHHHHHHHCCCCCCC
Confidence            9999999999999999998665433221 111345666 999999887    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      . .+......+..+.++.+ +..++..+.++++
T Consensus       204 ~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  234 (277)
T cd06640         204 M-HPMRVLFLIPKNNPPTL-TGEFSKPFKEFID  234 (277)
T ss_pred             c-ChHhHhhhhhcCCCCCC-chhhhHHHHHHHH
Confidence            3 44444444444444444 3456777777765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.88  E-value=1.6e-21  Score=143.27  Aligned_cols=165  Identities=21%  Similarity=0.265  Sum_probs=115.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|+|++..+. ... +...+++++++..++++.+.+..               +  ...++|+.+++|   +|+
T Consensus        45 ~~l~~l~h~~i~~~~~-~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h---~dl  119 (262)
T cd05572          45 EILEECNHPFIVKLYR-TFK-DKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIY---RDL  119 (262)
T ss_pred             HHHHhCCCCCEeeeee-eEE-cCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCccc---CCC
Confidence            3567788877765443 333 45668899999888787764311               0  124677765555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+........  .....++.. |++||.+..    ..++.++|+||+|+++|++++|..||
T Consensus       120 ~~~nilv~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~-~~~PE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~  192 (262)
T cd05572         120 KPENLLLDSNGYVKLVDFGFAKKLKSGQK--TWTFCGTPE-YVAPEIILN----KGYDFSVDYWSLGILLYELLTGRPPF  192 (262)
T ss_pred             CHHHEEEcCCCCEEEeeCCcccccCcccc--cccccCCcC-ccChhHhcC----CCCCChhhhhhhHHHHHHHHhCCCCc
Confidence            59999999999999999999877654321  122456677 999999876    67788999999999999999999999


Q ss_pred             CCCCC-cHHHHHHHhh-CCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGS-PFEQLKQVVQ-DDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~-~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..... +......+.. ...+.+ |...+++++++++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  228 (262)
T cd05572         193 GEDDEDPMEIYNDILKGNGKLEF-PNYIDKAAKDLIK  228 (262)
T ss_pred             CCCCCCHHHHHHHHhccCCCCCC-CcccCHHHHHHHH
Confidence            87331 3444444443 333444 3445888888874

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.8e-21  Score=143.45  Aligned_cols=172  Identities=26%  Similarity=0.356  Sum_probs=114.7

Q ss_pred             HHHHh-CCCCcEEEEEEeeec----CCCceEEEeccCccchHHHHHHH-------------------H--HHHHHhhcch
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQKELET-------------------L--RCIYIQDYHL   57 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~-------------------~--~~~~l~~~~~   57 (182)
                      +++.+ .|+|++..+..+...    ....+++++++...+++.+.+..                   +  ...|+|+.++
T Consensus        55 ~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i  134 (275)
T cd06608          55 ILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV  134 (275)
T ss_pred             HHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            45566 566665444333322    24557899999887665543211                   0  1247777766


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l~  136 (182)
                      +|   +|++|+||+++.++.++|+|||.+......... .....++.. |+|||.+..... ...++.++|+||+|+++|
T Consensus       135 ~H---~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~  209 (275)
T cd06608         135 IH---RDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR-RNTFIGTPY-WMAPEVIACDEQPDASYDARSDVWSLGITAI  209 (275)
T ss_pred             cc---CCCCHHHEEEccCCeEEECCCccceecccchhh-hcCcccccc-ccCHhHhcccccccCCccccccHHHhHHHHH
Confidence            55   455599999999999999999988665433221 122556777 999998764211 134667899999999999


Q ss_pred             HHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCC-CCCCHHHHHHhhh
Q psy17162        137 ELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP-GEFSSDFKDFITL  181 (182)
Q Consensus       137 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~~~~i~~  181 (182)
                      +|++|++||.+ ........++..+..+.+.. ..+++++++++++
T Consensus       210 ~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  254 (275)
T cd06608         210 ELADGKPPLCD-MHPMRALFKIPRNPPPTLKSPENWSKKFNDFISE  254 (275)
T ss_pred             HHHhCCCCccc-cchHHHHHHhhccCCCCCCchhhcCHHHHHHHHH
Confidence            99999999986 34445566666655444442 3478888888763

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.88  E-value=1.5e-21  Score=144.87  Aligned_cols=160  Identities=14%  Similarity=0.180  Sum_probs=108.1

Q ss_pred             CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcEE
Q psy17162          9 NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      .|++ ++.+.+... +...+++++|+..++++.+.+..                 ....|+|+.++   .|+|+||+||+
T Consensus        55 ~~~~-i~~~~~~~~-~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~di~p~nil  129 (278)
T cd05606          55 DCPF-IVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFV---VYRDLKPANIL  129 (278)
T ss_pred             CCCc-Eeeeeeeee-cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE---EcCCCCHHHEE
Confidence            3444 444444444 44568899999888877654311                 01247777654   45556699999


Q ss_pred             EcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCC-
Q psy17162         72 QRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS-  150 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~-  150 (182)
                      ++.++.++|+|||.+........  . ...++.. |+|||.+..   ...++.++|+||+|+++|+|++|..||.+... 
T Consensus       130 i~~~~~~kl~dfg~~~~~~~~~~--~-~~~~~~~-y~aPE~~~~---~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~  202 (278)
T cd05606         130 LDEHGHVRISDLGLACDFSKKKP--H-ASVGTHG-YMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK  202 (278)
T ss_pred             ECCCCCEEEccCcCccccCccCC--c-CcCCCcC-CcCcHHhcC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc
Confidence            99999999999999876543322  2 2567777 999999874   13578899999999999999999999976311 


Q ss_pred             cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        151 PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       151 ~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .............+.+ +..+|+++.+++++
T Consensus       203 ~~~~~~~~~~~~~~~~-~~~~s~~~~~li~~  232 (278)
T cd05606         203 DKHEIDRMTLTMAVEL-PDSFSPELRSLLEG  232 (278)
T ss_pred             chHHHHHHhhccCCCC-CCcCCHHHHHHHHH
Confidence            2222333333334555 34568888888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.88  E-value=1.5e-21  Score=144.92  Aligned_cols=158  Identities=15%  Similarity=0.194  Sum_probs=107.1

Q ss_pred             CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcEEE
Q psy17162         10 QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTFHQ   72 (182)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~nil~   72 (182)
                      +++ ++.+.+... +....++++|+..++++.+.+..                 ....|+|+.+++|   +|+||+||++
T Consensus        56 ~~~-i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH---~dikp~Nil~  130 (279)
T cd05633          56 CPF-IVCMTYAFH-TPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY---RDLKPANILL  130 (279)
T ss_pred             CCc-EeEEEEEEe-cCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC---CCCCHHHEEE
Confidence            444 444444444 34568899999888888654311                 1234788776555   5555999999


Q ss_pred             cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCC-c
Q psy17162         73 RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS-P  151 (182)
Q Consensus        73 ~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~-~  151 (182)
                      +.++.++|+|||.+........   ....++.. |+|||.+..   ...++.++|+||+||++|+|++|..||..... .
T Consensus       131 ~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  203 (279)
T cd05633         131 DEHGHVRISDLGLACDFSKKKP---HASVGTHG-YMAPEVLQK---GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  203 (279)
T ss_pred             CCCCCEEEccCCcceeccccCc---cCcCCCcC-ccCHHHhcC---CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC
Confidence            9999999999999865443222   22457777 999998863   14578899999999999999999999975222 2


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        152 FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       152 ~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ............+.+ +..++++++++++
T Consensus       204 ~~~~~~~~~~~~~~~-~~~~~~~~~~li~  231 (279)
T cd05633         204 KHEIDRMTLTVNVEL-PDSFSPELKSLLE  231 (279)
T ss_pred             HHHHHHHhhcCCcCC-ccccCHHHHHHHH
Confidence            222333222333444 4557888888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.88  E-value=2.6e-21  Score=144.17  Aligned_cols=166  Identities=17%  Similarity=0.263  Sum_probs=114.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------H--HHHHHhhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------L--RCIYIQDYH   56 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------~--~~~~l~~~~   56 (182)
                      +++.+.|++++ .+.+... +....++++|+..++++.+.+..                         +  ...|+|+.+
T Consensus        62 ~l~~l~~~~i~-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (288)
T cd05061          62 VMKGFTCHHVV-RLLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK  139 (288)
T ss_pred             HHHhCCCCCee-eEEEEEc-CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56677777655 4455444 44578899999887777665521                         1  124777776


Q ss_pred             hhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      ++|   +|+||+||+++.++.++|+|||+++......... .....++.. |+|||.+..    ..++.++|+||+||++
T Consensus       140 i~H---~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~~pE~~~~----~~~~~~~DvwslG~~l  211 (288)
T cd05061         140 FVH---RDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKD----GVFTTSSDMWSFGVVL  211 (288)
T ss_pred             CcC---CCCChheEEEcCCCcEEECcCCccccccccccccccCCCccccc-ccCHHHhcc----CCCChHhHHHHHHHHH
Confidence            555   5555999999999999999999987543322111 111233445 999999887    6788999999999999


Q ss_pred             HHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        136 IELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       136 ~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+|++ |..||.+ ....+....+..+..+.+ +...++.+++++++
T Consensus       212 ~el~~~~~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  256 (288)
T cd05061         212 WEITSLAEQPYQG-LSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRM  256 (288)
T ss_pred             HHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHH
Confidence            99998 7899987 344455555555554555 45567888888753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.88  E-value=6.5e-22  Score=148.12  Aligned_cols=166  Identities=17%  Similarity=0.246  Sum_probs=113.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++.. .+... .....++++++..++++.+++..              +  ...+||+.+++|   +|+||
T Consensus        69 ~l~~~~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H---~dL~p  143 (297)
T cd06656          69 VMRENKNPNIVNY-LDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIH---RDIKS  143 (297)
T ss_pred             HHHhCCCCCEeeE-EEEEe-cCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCCCH
Confidence            5666777776544 44443 45578899999888777664311              1  134777776555   55669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+......... .....++.. |++||.+..    ..++.++|+||+|+++|++++|..||.+
T Consensus       144 ~Nili~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slGvil~~l~tg~~pf~~  217 (297)
T cd06656         144 DNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPY-WMAPEVVTR----KAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (297)
T ss_pred             HHEEECCCCCEEECcCccceEccCCccC-cCcccCCcc-ccCHHHHcC----CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999988654333221 122456667 999999987    6778999999999999999999999977


Q ss_pred             CCCcHHHHHHHhhCCCCCC-CCCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRL-PPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~-~~~~~s~~~~~~i~~  181 (182)
                       ..+......+..+..+.. .+..++..+++++.+
T Consensus       218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  251 (297)
T cd06656         218 -ENPLRALYLIATNGTPELQNPERLSAVFRDFLNR  251 (297)
T ss_pred             -CCcchheeeeccCCCCCCCCccccCHHHHHHHHH
Confidence             333333333333322332 245677888887753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.88  E-value=1.7e-21  Score=144.49  Aligned_cols=164  Identities=18%  Similarity=0.129  Sum_probs=107.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++.. .+...  ....++++++...+++.+.+..                  .+..|+|+.+++|+   |+
T Consensus        62 ~l~~~~~~~i~~~-~~~~~--~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~---dl  135 (279)
T cd05109          62 VMAGVGSPYVCRL-LGICL--TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHR---DL  135 (279)
T ss_pred             HHHhcCCCCCceE-EEEEc--CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecc---cc
Confidence            4566777777543 33333  2335567777666665554311                  01247887766554   55


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc-cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL-YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ||+||+++.++.+||+|||+++........... ...++.. |++||.+..    ..++.++|+||+||++|++++ |..
T Consensus       136 kp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~~l~el~t~g~~  210 (279)
T cd05109         136 AARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK-WMALESILH----RRFTHQSDVWSYGVTVWELMTFGAK  210 (279)
T ss_pred             ccceEEEcCCCcEEECCCCceeecccccceeecCCCccchh-hCCHHHhcc----CCCCchhHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999998765432211011 1122345 999999987    678899999999999999998 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. .........+..+..++. +..+++++.+++.
T Consensus       211 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  245 (279)
T cd05109         211 PYDG-IPAREIPDLLEKGERLPQ-PPICTIDVYMIMV  245 (279)
T ss_pred             CCCC-CCHHHHHHHHHCCCcCCC-CccCCHHHHHHHH
Confidence            9987 344344444444444444 4457888888764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.88  E-value=2.3e-21  Score=145.48  Aligned_cols=166  Identities=16%  Similarity=0.151  Sum_probs=111.2

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +++.+ +|+|++.. .+... ....+++++|+...+++.+.+..                   ....|+|+.+++|+   
T Consensus        91 ~l~~l~~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~---  165 (302)
T cd05055          91 IMSHLGNHENIVNL-LGACT-IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHR---  165 (302)
T ss_pred             HHHhccCCCCcceE-EEEEe-cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehh---
Confidence            56667 56666544 44443 45568899998877776654321                   01347887766555   


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      |+||+||+++.++.++++|||.+......... ......++.. |+|||.+..    ..++.++|+||+|+++|+|++ |
T Consensus       166 dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DiwslGvil~el~t~g  240 (302)
T cd05055         166 DLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVK-WMAPESIFN----CVYTFESDVWSYGILLWEIFSLG  240 (302)
T ss_pred             hhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccc-cCCHhhhcc----CCCCcHhHHHHHHHHHHHHHhCC
Confidence            55599999999999999999998765433210 0111233445 999999887    678899999999999999998 9


Q ss_pred             CCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..||.+. ...+..... ..+..+.. +...++++++++++
T Consensus       241 ~~p~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  279 (302)
T cd05055         241 SNPYPGM-PVDSKFYKLIKEGYRMAQ-PEHAPAEIYDIMKT  279 (302)
T ss_pred             CCCcCCC-CchHHHHHHHHcCCcCCC-CCCCCHHHHHHHHH
Confidence            9999873 333333333 33433333 44578888888753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.88  E-value=5.8e-22  Score=152.76  Aligned_cols=143  Identities=18%  Similarity=0.272  Sum_probs=96.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCC----CceEEEeccCccchHHH-------------------HHHHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDD----KKVVLVTGKGEAEKVQK-------------------ELETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~-------------------~l~~~~~~~l~~~~~~h~   60 (182)
                      +++.++|+|++.. .++.....    ..+++++++... ++.+                   .+.++  .|||+.+++| 
T Consensus        52 ~l~~l~h~niv~~-~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL--~~LH~~~ivH-  126 (372)
T cd07853          52 MLCFFKHDNVLSA-LDILQPPHIDPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGL--KYLHSAGILH-  126 (372)
T ss_pred             HHHhCCCCCcCCH-hheecCCCccccceEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHH--HHHHhCCeeC-
Confidence            5677888887643 33333222    257788888653 3322                   22333  3788776555 


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                        +|+||+||+++.++.+||+|||++...............++.. |+|||.+.+   ...++.++|+||+||++|+|++
T Consensus       127 --~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~il~el~~  200 (372)
T cd07853         127 --RDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQY-YRAPEILMG---SRHYTSAVDIWSVGCIFAELLG  200 (372)
T ss_pred             --CCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCC-cCCHHHHcC---CCCCCcHHHHHhHHHHHHHHHc
Confidence              5556999999999999999999987643322111222456677 999999876   1346789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHH
Q psy17162        141 GRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i  158 (182)
                      |++||.+ ..+.+.+..+
T Consensus       201 g~~pf~~-~~~~~~~~~i  217 (372)
T cd07853         201 RRILFQA-QSPIQQLDLI  217 (372)
T ss_pred             CCCCCCC-CCHHHHHHHH
Confidence            9999987 3444444433

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.5e-21  Score=143.18  Aligned_cols=169  Identities=20%  Similarity=0.218  Sum_probs=112.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.... ... +...+++++++...+.+.+.+..                  ....++|+.+++|   +|
T Consensus        52 ~~l~~~~h~~i~~~~~-~~~-~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h---~d  126 (262)
T cd06613          52 SMLKECRHPNIVAYFG-SYL-RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH---RD  126 (262)
T ss_pred             HHHHhCCCCChhceEE-EEE-eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee---cC
Confidence            3677788888875433 333 45568899998877666653311                  1134788776655   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||.+......... .....++.. |+|||.+..... ..++.++|+||+|+++|+|++|.+|
T Consensus       127 l~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-y~~Pe~~~~~~~-~~~~~~~Di~slG~~l~~~~tg~~p  203 (262)
T cd06613         127 IKGANILLTEDGDVKLADFGVSAQLTATIAK-RKSFIGTPY-WMAPEVAAVERK-GGYDGKCDIWALGITAIELAELQPP  203 (262)
T ss_pred             CChhhEEECCCCCEEECccccchhhhhhhhc-cccccCCcc-ccCchhhccccc-CCcCchhhhHHHHHHHHHHHhCCCC
Confidence            5599999999999999999998765443221 122456677 999999876100 2677899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhC-CCC-CCC-CCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQD-DPP-RLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~-~~~-~~~-~~~~s~~~~~~i~  180 (182)
                      |.+ ..+......+... ..+ ... +..++.+++++++
T Consensus       204 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  241 (262)
T cd06613         204 MFD-LHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIK  241 (262)
T ss_pred             CCC-CCHHHHHHHHHhccCCCccccchhhhhHHHHHHHH
Confidence            987 3444444443333 111 111 2245677788775

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.3e-21  Score=143.77  Aligned_cols=163  Identities=18%  Similarity=0.166  Sum_probs=111.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++..+. ....  ...++++++...+++.+.+..                  ....|||+.+++   |+|+
T Consensus        62 ~l~~l~h~~i~~~~~-~~~~--~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~---H~di  135 (279)
T cd05057          62 VMASVDHPHVVRLLG-ICLS--SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLV---HRDL  135 (279)
T ss_pred             HHHhCCCCCcceEEE-EEec--CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEE---eccc
Confidence            566778888765543 3332  567888988887777664321                  013477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc-cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL-YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ||+||+++.++.+||+|||.+............ ...++.. |++||.+..    ..++.++|+||+|+++|++++ |..
T Consensus       136 ~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~~l~el~~~g~~  210 (279)
T cd05057         136 AARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIK-WMALESILH----RIYTHKSDVWSYGVTVWELMTFGAK  210 (279)
T ss_pred             CcceEEEcCCCeEEECCCcccccccCcccceecCCCccccc-ccCHHHhhc----CCcCchhhHHHHHHHHHHHhcCCCC
Confidence            699999999999999999998765433221111 0112334 999999876    678899999999999999998 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i  179 (182)
                      ||.+ ....+....+..+...+. +...+.++.+++
T Consensus       211 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  244 (279)
T cd05057         211 PYEG-IPAVEIPDLLEKGERLPQ-PPICTIDVYMVL  244 (279)
T ss_pred             CCCC-CCHHHHHHHHhCCCCCCC-CCCCCHHHHHHH
Confidence            9988 455455555555554444 344667776654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.88  E-value=7.9e-22  Score=145.14  Aligned_cols=166  Identities=19%  Similarity=0.268  Sum_probs=114.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------H--HHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------L--RCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~--~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++..+....  +...+++++++..++++.+.+..                   +  ...+||+.++.|   
T Consensus        55 ~l~~~~h~~i~~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H---  129 (267)
T cd08229          55 LLKQLNHPNVIKYYASFI--EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMH---  129 (267)
T ss_pred             HHHHccCCchhhhhheeE--eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeec---
Confidence            567788877764443332  34567788888776666543210                   0  124777776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++++|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|.
T Consensus       130 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-~~ape~~~~----~~~~~~~Dv~slG~il~~l~~g~  203 (267)
T cd08229         130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPY-YMSPERIHE----NGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             CCCCHHHEEEcCCCCEEECcchhhhccccCCcc-cccccCCcC-ccCHHHhcC----CCccchhhHHHHHHHHHHHHhCC
Confidence            555699999999999999999988765433221 112456667 999999977    67788999999999999999999


Q ss_pred             CCCCCCCCcH-HHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPF-EQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+..... .....+.....++.++...++++++++.
T Consensus       204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08229         204 SPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN  242 (267)
T ss_pred             CCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHH
Confidence            9997633222 2233344445555655678889999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.88  E-value=1.9e-21  Score=142.77  Aligned_cols=165  Identities=19%  Similarity=0.247  Sum_probs=113.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+.|+|++.. .+..  .....++++++..++++.+.+..                   ....++|+.++   .|+|
T Consensus        54 ~l~~l~h~~i~~~-~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i---~H~d  127 (260)
T cd05067          54 LMKQLQHPRLVRL-YAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY---IHRD  127 (260)
T ss_pred             HHHhcCCcCeeeE-EEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe---eccc
Confidence            5677888776644 3443  34567899998887777654311                   11247776655   4556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.++|+|||.+...............++.. |+|||.+..    ..++.++|+||+|+++|++++ |.+
T Consensus       128 l~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~~pe~~~~----~~~~~~~Di~slG~~l~el~~~g~~  202 (260)
T cd05067         128 LRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINY----GTFTIKSDVWSFGILLTEIVTYGRI  202 (260)
T ss_pred             ccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCccccc-ccCHHHhcc----CCcCcccchHHHHHHHHHHHhCCCC
Confidence            66999999999999999999987655322211111233345 999999877    678889999999999999998 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+. ...+....+..+..++. +...+.++++++++
T Consensus       203 p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  238 (260)
T cd05067         203 PYPGM-TNPEVIQNLERGYRMPR-PDNCPEELYELMRL  238 (260)
T ss_pred             CCCCC-ChHHHHHHHHcCCCCCC-CCCCCHHHHHHHHH
Confidence            99873 44444444444444444 45678888888753

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=2.8e-21  Score=143.57  Aligned_cols=136  Identities=17%  Similarity=0.167  Sum_probs=97.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++.........+...+++++++...+++.+.+..              +  ...+||+.+++|   +|+||
T Consensus        59 ~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H---~dlkp  135 (283)
T cd05080          59 ILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIH---RDLAA  135 (283)
T ss_pred             HHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeec---cccCh
Confidence            6777888777654444444445568899999888887764321              1  124777766555   55669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +||+++.++.++|+|||++.........  ......++.. |+|||.+..    ..++.++|+||+|+++|+|++|..||
T Consensus       136 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-~~~PE~~~~----~~~~~~~Di~slG~~l~el~tg~~p~  210 (283)
T cd05080         136 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-WYAVECLKE----NKFSYASDVWSFGVTLYELLTHCDSK  210 (283)
T ss_pred             heEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCce-eeCHhHhcc----cCCCcccccHHHHHHHHHHHhCCCCC
Confidence            9999999999999999998765433211  0111233445 999999877    67889999999999999999999998


Q ss_pred             CC
Q psy17162        146 DT  147 (182)
Q Consensus       146 ~~  147 (182)
                      ..
T Consensus       211 ~~  212 (283)
T cd05080         211 QS  212 (283)
T ss_pred             CC
Confidence            64

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.88  E-value=1.3e-21  Score=149.22  Aligned_cols=121  Identities=19%  Similarity=0.215  Sum_probs=82.9

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|+|+.+++|   +|+||+||+++.++.+||+|||++......... ......++.. |+|||.+..    ..++.++|+
T Consensus       193 ~~lH~~~i~H---~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  264 (343)
T cd05103         193 EFLASRKCIH---RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WMAPETIFD----RVYTIQSDV  264 (343)
T ss_pred             HHHHhCCeec---CCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc-eECcHHhcC----CCCCchhhH
Confidence            4777766555   555599999999999999999998764332211 1111223445 999999887    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i  179 (182)
                      ||+|+++|++++ |..||.+..........+..+..++. |...++++.+++
T Consensus       265 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  315 (343)
T cd05103         265 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTM  315 (343)
T ss_pred             HHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC-CCCCCHHHHHHH
Confidence            999999999997 99999874333333333344444444 344666666654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.88  E-value=1.9e-21  Score=145.89  Aligned_cols=165  Identities=15%  Similarity=0.155  Sum_probs=107.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------------H
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------------L   47 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------------~   47 (182)
                      +++.++|+|++. +.+... +...+++++|+..++++.+++..                                    .
T Consensus        72 ~l~~l~h~niv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~  149 (304)
T cd05096          72 ILSRLKDPNIIR-LLGVCV-DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIAS  149 (304)
T ss_pred             HHhhcCCCCeeE-EEEEEe-cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            566778877664 444444 34568899999887776553311                                    1


Q ss_pred             HHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccc
Q psy17162         48 RCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRS  126 (182)
Q Consensus        48 ~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~  126 (182)
                      +..|||+.+++|   +|+||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..++.++
T Consensus       150 al~~lH~~~ivH---~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~  221 (304)
T cd05096         150 GMKYLSSLNFVH---RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIR-WMAWECILM----GKFTTAS  221 (304)
T ss_pred             HHHHHHHCCccc---cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCcc-ccCHHHHhc----CCCCchh
Confidence            134788776555   555699999999999999999998764332210 0111233455 999999887    6788999


Q ss_pred             hHHHHHHHHHHHHh--CCCCCCCCCCcHHHHHHHhh---C----CCCCCCCCCCCHHHHHHhh
Q psy17162        127 DVWSLGISLIELAT--GRFPYDTWGSPFEQLKQVVQ---D----DPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       127 Diwslg~~l~~l~~--g~~pf~~~~~~~~~~~~i~~---~----~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+||+|+++|+|++  +..||.+. ...+....+..   .    ..+.. +..+++.+++++.
T Consensus       222 Dv~slG~~l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  282 (304)
T cd05096         222 DVWAFGVTLWEILMLCKEQPYGEL-TDEQVIENAGEFFRDQGRQVYLFR-PPPCPQGLYELML  282 (304)
T ss_pred             hhHHHHHHHHHHHHccCCCCCCcC-CHHHHHHHHHHHhhhccccccccC-CCCCCHHHHHHHH
Confidence            99999999999986  66888763 33333332211   1    11112 3356778888765

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.88  E-value=1.3e-21  Score=145.54  Aligned_cols=136  Identities=19%  Similarity=0.188  Sum_probs=94.1

Q ss_pred             hCCCCcEEEEEEeeec----CCCceEEEeccCccchHHHH---------------------HHHHHHHHHhhcchhcccc
Q psy17162          8 FNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQKE---------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~---------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      ++|+|++. +.++...    ....+++++++... ++.+.                     +.++  .|+|+.+++|   
T Consensus        59 ~~h~ni~~-~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al--~~lH~~~ivH---  131 (288)
T cd07863          59 FDHPNIVR-LMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGL--DFLHANCIVH---  131 (288)
T ss_pred             cCCCCeee-eeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHH--HHHHhCCeec---
Confidence            46776654 3433321    23446788887653 33322                     2223  4788776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||++........  .....++.. |+|||++.+    ..++.++|+||+||++|+|++|.
T Consensus       132 ~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~DiwslG~~l~~l~~g~  204 (288)
T cd07863         132 RDLKPENILVTSGGQVKLADFGLARIYSCQMA--LTPVVVTLW-YRAPEVLLQ----STYATPVDMWSVGCIFAEMFRRK  204 (288)
T ss_pred             CCCCHHHEEECCCCCEEECccCccccccCccc--CCCcccccc-ccCchHhhC----CCCCCcchhhhHHHHHHHHHhCC
Confidence            55559999999999999999999876543322  222456777 999999987    67889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQV  158 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i  158 (182)
                      +||.+ ....+.+.++
T Consensus       205 ~~f~~-~~~~~~~~~~  219 (288)
T cd07863         205 PLFCG-NSEADQLGKI  219 (288)
T ss_pred             cCcCC-CCHHHHHHHH
Confidence            99987 3443444443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.88  E-value=2e-21  Score=143.27  Aligned_cols=170  Identities=18%  Similarity=0.233  Sum_probs=109.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------HHHHHHhhcchhccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------LRCIYIQDYHLCVRS   61 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------~~~~~l~~~~~~h~~   61 (182)
                      +++.++|+|++..+. ... +...+++++|+...+++.+++..                      ...+|+|+.+++   
T Consensus        48 ~~~~l~h~nii~~~~-~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv---  122 (269)
T cd05042          48 PYRELNHPNVLQCLG-QCI-ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFI---  122 (269)
T ss_pred             HHHhCCCCCcceEEE-EEC-CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEe---
Confidence            456678888765443 333 45668899999888777664311                      013477777655   


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCC---CCCCCccchHHHHHHHHHH
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGN---PSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~---~~~~~~~~Diwslg~~l~~  137 (182)
                      |+|+||+||+++.++.+||+|||++.......... .....++.. |+|||++.....   ...++.++|+||+||++|+
T Consensus       123 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~e  201 (269)
T cd05042         123 HSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLR-WLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWE  201 (269)
T ss_pred             cccccHhheEecCCCcEEEeccccccccccchheeccCCCCCccc-ccCHHHHhhccccccccccchhhHHHHHHHHHHH
Confidence            55555999999999999999999986543221100 111233445 999998753110   1356789999999999999


Q ss_pred             HHh-CCCCCCCCCCcHHHHHHHhhCCCCCCC----CCCCCHHHHHHhh
Q psy17162        138 LAT-GRFPYDTWGSPFEQLKQVVQDDPPRLP----PGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~~~~i~  180 (182)
                      |++ |..||.. ..+.+....+......+++    +..+++..+++++
T Consensus       202 l~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (269)
T cd05042         202 LFTAADQPYPD-LSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQ  248 (269)
T ss_pred             HHhCCCCCCCc-CCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHH
Confidence            999 7899987 3444555554444333332    2256677776654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.88  E-value=2.3e-21  Score=141.86  Aligned_cols=165  Identities=15%  Similarity=0.285  Sum_probs=119.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++ .+.+... +....++++++...+++.+.+..                   ....++|+.++.   |++
T Consensus        52 ~l~~l~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~---h~~  126 (256)
T cd08218          52 VLSNMKHPNIV-QYQESFE-ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKIL---HRD  126 (256)
T ss_pred             HHHhCCCCCee-eeEeeec-CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEe---cCC
Confidence            67778887765 4444444 45678899998877666554311                   012477776554   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++++|||.+............ ..++.. |+|||.+.+    ...+.++|+||+|++++++++|..|
T Consensus       127 l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~-~~~~~~-~~~pe~~~~----~~~~~~~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08218         127 IKSQNIFLTKDGTIKLGDFGIARVLNSTVELART-CIGTPY-YLSPEICEN----RPYNNKSDIWALGCVLYEMCTLKHA  200 (256)
T ss_pred             CCHHHEEEcCCCCEEEeeccceeecCcchhhhhh-ccCCcc-ccCHHHhCC----CCCCCccchhHHHHHHHHHHcCCCC
Confidence            6699999999999999999998765443321112 456667 999999887    6777899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.. ....+....+..+..++. +..++.++++++++
T Consensus       201 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  235 (256)
T cd08218         201 FEA-GNMKNLVLKIIRGSYPPV-SSHYSYDLRNLVSQ  235 (256)
T ss_pred             ccC-CCHHHHHHHHhcCCCCCC-cccCCHHHHHHHHH
Confidence            987 455566666677766655 45678888888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.88  E-value=4.9e-21  Score=143.80  Aligned_cols=168  Identities=21%  Similarity=0.247  Sum_probs=114.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.+... +...+++++|+..++++.+.+..                 ....|+|+.+++|   +|+
T Consensus        53 ~~l~~~~~~~i~-~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~dl  127 (305)
T cd05609          53 DILTFAENPFVV-SMFCSFE-TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVH---RDL  127 (305)
T ss_pred             HHHHhCCCCCee-eeEEEEe-cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cCC
Confidence            356777777666 4444444 45678899999888777664321                 1234777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh--------------hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI--------------IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSL  131 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~--------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwsl  131 (182)
                      +|+||+++.++.++|+|||.++.......              .......++.. |+|||.+..    ..++.++|+||+
T Consensus       128 ~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~sl  202 (305)
T cd05609         128 KPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPE-YIAPEVILR----QGYGKPVDWWAM  202 (305)
T ss_pred             chHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCcc-ccCchhccC----CCCCchhhHHHH
Confidence            59999999999999999998763211000              00111345566 999999887    678899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCC-CCCCCCCCHHHHHHhhh
Q psy17162        132 GISLIELATGRFPYDTWGSPFEQLKQVVQDDPP-RLPPGEFSSDFKDFITL  181 (182)
Q Consensus       132 g~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~~i~~  181 (182)
                      |+++|++++|..||.+ ....+....+..+..+ +..+..+|.++++++++
T Consensus       203 G~vl~el~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  252 (305)
T cd05609         203 GIILYEFLVGCVPFFG-DTPEELFGQVISDDIEWPEGDEALPADAQDLISR  252 (305)
T ss_pred             HHHHHHHHhCCCCCCC-CCHHHHHHHHHhcccCCCCccccCCHHHHHHHHH
Confidence            9999999999999987 3444555555444322 12123578888888753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.88  E-value=4.4e-21  Score=144.85  Aligned_cols=163  Identities=20%  Similarity=0.225  Sum_probs=112.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH----------------HH--HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL----------------ET--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----------------~~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++... +... +....++++++..+ .+.+.+                ..  ....++|..+++|+   |+
T Consensus        78 ~l~~l~h~~iv~~~-~~~~-~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~---dL  151 (317)
T cd06635          78 FLQRIKHPNSIEYK-GCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR---DI  151 (317)
T ss_pred             HHHhCCCCCEEEEE-EEEe-eCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CC
Confidence            56677887776544 3333 34557788888754 332221                11  11347777766555   55


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||++.......     ...++.. |+|||.+.... ...++.++|+||+|+++|+|++|..||
T Consensus       152 ~p~Nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~-y~aPE~~~~~~-~~~~~~~~Dv~slGvil~el~~g~~p~  224 (317)
T cd06635         152 KAGNILLTEPGQVKLADFGSASIASPAN-----SFVGTPY-WMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKPPL  224 (317)
T ss_pred             CcccEEECCCCCEEEecCCCccccCCcc-----cccCCcc-ccChhhhhcCC-CCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999886544322     2456777 99999874211 145778999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .+ .........+..+..+..++..+++.++++++
T Consensus       225 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  258 (317)
T cd06635         225 FN-MNAMSALYHIAQNESPTLQSNEWSDYFRNFVD  258 (317)
T ss_pred             CC-ccHHHHHHHHHhccCCCCCCccccHHHHHHHH
Confidence            87 35555566666665555555678888888876

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.88  E-value=1.8e-21  Score=142.25  Aligned_cols=165  Identities=22%  Similarity=0.331  Sum_probs=113.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.+... +...+++++++....++.+.+..                  ....++|+.+++|   +|+
T Consensus        51 ~~~~l~~~~i~~-~~~~~~-~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H---~dl  125 (256)
T cd06612          51 ILKQCDSPYIVK-YYGSYF-KNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH---RDI  125 (256)
T ss_pred             HHHhCCCCcEee-eeeeee-cCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCC
Confidence            466677777764 444444 44678899999887776654311                  1134777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |+|||.+.+    ..++.++|+||+|+++|+|++|+.||
T Consensus       126 ~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~s~G~il~~l~~g~~p~  199 (256)
T cd06612         126 KAGNILLNEEGQAKLADFGVSGQLTDTMAK-RNTVIGTPF-WMAPEVIQE----IGYNNKADIWSLGITAIEMAEGKPPY  199 (256)
T ss_pred             CcceEEECCCCcEEEcccccchhcccCccc-cccccCCcc-ccCHHHHhc----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999998776543321 122345666 999999887    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      .. ..+......+.....+.+. +..+++++.++++
T Consensus       200 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  234 (256)
T cd06612         200 SD-IHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVK  234 (256)
T ss_pred             CC-cchhhhhhhhccCCCCCCCchhhcCHHHHHHHH
Confidence            87 3333333333333323232 3356778888775

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.88  E-value=2.4e-21  Score=142.19  Aligned_cols=166  Identities=16%  Similarity=0.199  Sum_probs=111.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++..+ +.....+...++++++...+++.+++..                  ....|+|..+++|   +|+
T Consensus        49 ~l~~l~h~~iv~~~-~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~dl  124 (262)
T cd05058          49 IMKDFSHPNVLSLL-GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVH---RDL  124 (262)
T ss_pred             HHccCCCCCcceEE-EEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc---ccc
Confidence            45677887776543 4433345557788888777776654311                  0124777665555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh---hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI---IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~---~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      ||+||+++.++.+||+|||.+........   .......++.. |+|||.+..    ..++.++|+||+|+++|+|++ |
T Consensus       125 k~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~~  199 (262)
T cd05058         125 AARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVK-WMALESLQT----QKFTTKSDVWSFGVLLWELMTRG  199 (262)
T ss_pred             CcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCcc-ccChhHhcc----CccchHHHHHHHHHHHHHHHcCC
Confidence            69999999999999999999875432211   00111223445 999999877    678899999999999999999 5


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .+||.. ....+....+..+..+.. +..+|+.+.+++.
T Consensus       200 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  236 (262)
T cd05058         200 APPYPD-VDSFDITVYLLQGRRLLQ-PEYCPDPLYEVML  236 (262)
T ss_pred             CCCCCC-CCHHHHHHHHhcCCCCCC-CCcCCHHHHHHHH
Confidence            677776 455555555555554444 4557777777664

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.3e-21  Score=143.42  Aligned_cols=167  Identities=19%  Similarity=0.315  Sum_probs=112.8

Q ss_pred             HHHHhC---CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFN---QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+.   |+|++ .+.+... +....++++++..+.++.+.+..                ..+.++|+.+++|+   |
T Consensus        52 ~l~~l~~~~~~~vi-~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~---d  126 (277)
T cd06917          52 LLSQLRQSQPPNIT-KYYGSYL-KGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHR---D  126 (277)
T ss_pred             HHHHhccCCCCCee-eEeeeee-eCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccC---C
Confidence            455565   55554 4444443 45667899998888776654311                11347777765555   5


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||.+......... .....++.. |+|||.+..   ...++.++|+||+|+++|+|++|..|
T Consensus       127 l~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~~l~~ll~g~~p  201 (277)
T cd06917         127 IKAANILVTNTGNVKLCDFGVAALLNQNSSK-RSTFVGTPY-WMAPEVITE---GKYYDTKADIWSLGITIYEMATGNPP  201 (277)
T ss_pred             cCHHHEEEcCCCCEEEccCCceeecCCCccc-cccccCCcc-eeCHHHhcc---CCccccchhHHHHHHHHHHHHhCCCC
Confidence            5599999999999999999998766543321 122457777 999998864   13467899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+. ........+....++.++...+++++.+++++
T Consensus       202 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  237 (277)
T cd06917         202 YSDV-DAFRAMMLIPKSKPPRLEDNGYSKLLREFVAA  237 (277)
T ss_pred             CCCC-ChhhhhhccccCCCCCCCcccCCHHHHHHHHH
Confidence            9873 33333333333444555444578888887753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=6.2e-22  Score=153.49  Aligned_cols=132  Identities=19%  Similarity=0.129  Sum_probs=94.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+... .....++++++.. +++...                   +.++  .|+|+.+++|   +
T Consensus       135 ~il~~l~HpnIv~~-~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL--~ylH~~~IvH---r  206 (391)
T PHA03212        135 HILRAINHPSIIQL-KGTFT-YNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAI--QYLHENRIIH---R  206 (391)
T ss_pred             HHHHhCCCCCCCCE-eEEEE-ECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHhCCccc---C
Confidence            47888999888754 33333 2445667776654 333332                   2333  4888876555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||++..............+|++. |+|||++..    ..++.++|+||+||++|+|++|..
T Consensus       207 DiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvil~elltg~~  281 (391)
T PHA03212        207 DIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIA-TNAPELLAR----DPYGPAVDIWSAGIVLFEMATCHD  281 (391)
T ss_pred             CCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccC-CCChhhhcC----CCCCcHHHHHHHHHHHHHHHHCCC
Confidence            555999999999999999999986533221111223568888 999999987    678999999999999999999998


Q ss_pred             CCCC
Q psy17162        144 PYDT  147 (182)
Q Consensus       144 pf~~  147 (182)
                      ||.+
T Consensus       282 p~~~  285 (391)
T PHA03212        282 SLFE  285 (391)
T ss_pred             CcCC
Confidence            7753

>KOG0199|consensus

Probab=99.88  E-value=3e-22  Score=158.28  Aligned_cols=167  Identities=15%  Similarity=0.179  Sum_probs=125.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++..+.| ++++.++.+.-.  ..+.+|+|...+++|.+.|..                   ...+||.+.+.+|+|+- 
T Consensus       164 ~M~~L~H-~hliRLyGvVl~--qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLA-  239 (1039)
T KOG0199|consen  164 HMLKLQH-PHLIRLYGVVLD--QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLA-  239 (1039)
T ss_pred             HHHhccC-cceeEEeeeecc--chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhh-
Confidence            3444555 556677777763  678899999999999886633                   12357777766666655 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                        ..|+++.....|||+|||+.+.++.+... .+....--+..|+|||.+..    ..++.++|+|++|+++|||++ |+
T Consensus       240 --ARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh----~kFShaSDvWmyGVTiWEMFtyGE  313 (1039)
T KOG0199|consen  240 --ARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH----RKFSHASDVWMYGVTIWEMFTYGE  313 (1039)
T ss_pred             --hhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcc----ccccccchhhhhhhhHHhhhccCC
Confidence              99999999999999999999988776541 11111122335999999998    899999999999999999999 89


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHH-hhhC
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDF-ITLW  182 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~-i~~~  182 (182)
                      .||.| ....+++.+|-.+...+- |..+|..+.++ .+||
T Consensus       314 ePW~G-~~g~qIL~~iD~~erLpR-Pk~csedIY~imk~cW  352 (1039)
T KOG0199|consen  314 EPWVG-CRGIQILKNIDAGERLPR-PKYCSEDIYQIMKNCW  352 (1039)
T ss_pred             CCCCC-CCHHHHHHhccccccCCC-CCCChHHHHHHHHHhc
Confidence            99999 577788888776654444 56688888775 4566

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.88  E-value=3.1e-21  Score=144.99  Aligned_cols=161  Identities=20%  Similarity=0.239  Sum_probs=111.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH--------------------HHHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK--------------------ELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++.. .++.. +....++++++..+. +.+                    .+.+  ..|+|+.+++|   +
T Consensus        68 ~l~~l~h~niv~~-~~~~~-~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~--L~~LH~~~i~H---~  139 (307)
T cd06607          68 FLQQLRHPNTIEY-KGCYL-REHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQG--LAYLHSHERIH---R  139 (307)
T ss_pred             HHHhCCCCCEEEE-EEEEE-eCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHH--HHHHHHCCcee---c
Confidence            5677888776644 44444 345677888876532 222                    1122  34777776554   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |++|+||+++.++.++|+|||++.......     ...++.. |+|||++.... ...++.++|+||+|+++|+|++|++
T Consensus       140 dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~-y~aPE~~~~~~-~~~~~~~sDv~s~G~il~el~tg~~  212 (307)
T cd06607         140 DIKAGNILLTEPGTVKLADFGSASLVSPAN-----SFVGTPY-WMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKP  212 (307)
T ss_pred             CCCcccEEECCCCCEEEeecCcceecCCCC-----CccCCcc-ccCceeeeccC-CCCCCcccchHHHHHHHHHHHcCCC
Confidence            566999999999999999999886543321     2456667 99999875311 1457789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ .........+..+.++.+++..++.+++++++
T Consensus       213 p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  248 (307)
T cd06607         213 PLFN-MNAMSALYHIAQNDSPTLSSNDWSDYFRNFVD  248 (307)
T ss_pred             CCCC-ccHHHHHHHHhcCCCCCCCchhhCHHHHHHHH
Confidence            9987 35545555555555566656678888888875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PTZ00284 protein kinase; Provisional

Probab=99.88  E-value=9.6e-22  Score=155.71  Aligned_cols=129  Identities=15%  Similarity=0.141  Sum_probs=89.5

Q ss_pred             EEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccCCCCCcEEEcC
Q psy17162         14 GVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRYFSVDTFHQRL   74 (182)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~   74 (182)
                      ++.+.++...+...+++++++.. +.+.+.                   +.++  .|||..  .++.|+||||+||+++.
T Consensus       193 i~~i~~~~~~~~~~~~iv~~~~g-~~l~~~l~~~~~l~~~~~~~i~~qi~~aL--~yLH~~--~gIiHrDlKP~NILl~~  267 (467)
T PTZ00284        193 LMKIQRYFQNETGHMCIVMPKYG-PCLLDWIMKHGPFSHRHLAQIIFQTGVAL--DYFHTE--LHLMHTDLKPENILMET  267 (467)
T ss_pred             eeeeEEEEEcCCceEEEEEeccC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHH--HHHHhc--CCeecCCCCHHHEEEec
Confidence            44555555555566777877643 233322                   2333  377752  23455666699999987


Q ss_pred             CC----------------eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         75 QF----------------LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        75 ~~----------------~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      ++                .+||+|||.+......    ....+|+.. |+|||++.+    ..++.++||||+||++|+|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~----~~~~~gt~~-Y~APE~~~~----~~~~~~~DiwSlGvil~el  338 (467)
T PTZ00284        268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS----RTAIVSTRH-YRSPEVVLG----LGWMYSTDMWSMGCIIYEL  338 (467)
T ss_pred             CCcccccccccccCCCCceEEECCCCccccCccc----cccccCCcc-ccCcHHhhc----CCCCcHHHHHHHHHHHHHH
Confidence            65                4999999987543222    223678888 999999988    7889999999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHH
Q psy17162        139 ATGRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~  157 (182)
                      ++|++||.+ ....+.+..
T Consensus       339 ltG~~pf~~-~~~~~~~~~  356 (467)
T PTZ00284        339 YTGKLLYDT-HDNLEHLHL  356 (467)
T ss_pred             HhCCCCCCC-CChHHHHHH
Confidence            999999987 344444433

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.88  E-value=2e-21  Score=142.55  Aligned_cols=164  Identities=16%  Similarity=0.206  Sum_probs=114.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.. .+... +...+++++++...+++.+.+..                   ....|||+.+++|   +|
T Consensus        55 ~l~~l~~~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h---~d  129 (261)
T cd05148          55 ALKRLRHKHLISL-FAVCS-VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIH---RD  129 (261)
T ss_pred             HHhcCCCcchhhe-eeeEe-cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec---cc
Confidence            5667777776643 33333 44567889998877666554310                   1134788776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ++|+||+++.++.+||+|||.+............ ..++.. |++||.+..    ..++.++|+||+|+++|+|++ |+.
T Consensus       130 l~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~-~~~~~~-~~~PE~~~~----~~~~~~~DiwslG~~l~~l~~~g~~  203 (261)
T cd05148         130 LAARNILVGEDLVCKVADFGLARLIKEDVYLSSD-KKIPYK-WTAPEAASH----GTFSTKSDVWSFGILLYEMFTYGQV  203 (261)
T ss_pred             cCcceEEEcCCceEEEccccchhhcCCccccccC-CCCceE-ecCHHHHcc----CCCCchhhHHHHHHHHHHHHcCCCC
Confidence            5599999999999999999998765443221111 223344 999999877    678889999999999999998 899


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ ....+....+..+..++. +...++.+.+++.
T Consensus       204 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  238 (261)
T cd05148         204 PYPG-MNNHEVYDQITAGYRMPC-PAKCPQEIYKIML  238 (261)
T ss_pred             CCCc-CCHHHHHHHHHhCCcCCC-CCCCCHHHHHHHH
Confidence            9987 345555666665554545 4567888888764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.88  E-value=2.4e-21  Score=142.69  Aligned_cols=169  Identities=17%  Similarity=0.184  Sum_probs=110.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|+|++..... .. ....+++++|+...+++.+.+..                 ....|+|..+++   |+|+|
T Consensus        59 ~~~~l~h~~ii~~~~~-~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~---H~dlk  133 (267)
T cd06645          59 MMKDCKHSNIVAYFGS-YL-RRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKM---HRDIK  133 (267)
T ss_pred             HHHhCCCCCeeeEEEE-EE-eCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee---cCCCC
Confidence            5566777777655443 33 45678899999888887664310                 113477777655   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||.+......... .....++.. |+|||.+.... ...++.++|+||+||++|+|++|..||.
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~-~~~~~~~~DvwSlG~il~~l~~~~~p~~  210 (267)
T cd06645         134 GANILLTDNGHVKLADFGVSAQITATIAK-RKSFIGTPY-WMAPEVAAVER-KGGYNQLCDIWAVGITAIELAELQPPMF  210 (267)
T ss_pred             HHHEEECCCCCEEECcceeeeEccCcccc-cccccCccc-ccChhhhcccc-CCCCCchhhhHHHHHHHHHHhcCCCCcc
Confidence            99999999999999999998655432211 122467777 99999875211 1457789999999999999999999997


Q ss_pred             CCCCcHHHHHHHhhC-CC-CCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQD-DP-PRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~-~~-~~~~-~~~~s~~~~~~i~~  181 (182)
                      .. .+.......... .. +.+. ...+|..+++++++
T Consensus       211 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  247 (267)
T cd06645         211 DL-HPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKM  247 (267)
T ss_pred             cc-cchhhHHhhhccCCCCCcccccCCCCHHHHHHHHH
Confidence            63 333333333222 11 1111 12467778887753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.88  E-value=3.1e-21  Score=142.91  Aligned_cols=165  Identities=18%  Similarity=0.241  Sum_probs=110.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------HHHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------~~~~~l~~~~~~h   59 (182)
                      +++.++|+|++ .+.+... +....++++++..++++.+.+..                        ....|||+.+++|
T Consensus        62 ~l~~l~~~~i~-~~~~~~~-~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH  139 (277)
T cd05036          62 IMSKFNHQNIV-RLIGVSF-ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIH  139 (277)
T ss_pred             HHHhCCCCCEe-eEEEEEc-cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence            56778887665 4444444 34456788888877766654311                        0124777776555


Q ss_pred             ccccCCCCCcEEEcCCC---eEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQF---LLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~---~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                         +|+||+||+++.++   .+||+|||.++......... ......... |+|||++..    ..++.++|+||+||++
T Consensus       140 ---~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DiwslG~il  211 (277)
T cd05036         140 ---RDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIK-WMPPEAFLD----GIFTSKTDVWSFGVLL  211 (277)
T ss_pred             ---cccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHh-hCCHHHHhc----CCcCchhHHHHHHHHH
Confidence               55569999998654   58999999987653221100 111222345 999999987    7789999999999999


Q ss_pred             HHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        136 IELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       136 ~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|++ |..||.+ .........+..+..+.. +..+|+.+.++++
T Consensus       212 ~el~~~g~~pf~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  255 (277)
T cd05036         212 WEIFSLGYMPYPG-RTNQEVMEFVTGGGRLDP-PKGCPGPVYRIMT  255 (277)
T ss_pred             HHHHcCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            99997 9999987 344444444444444444 4567888888775

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.88  E-value=3.4e-21  Score=143.42  Aligned_cols=165  Identities=19%  Similarity=0.263  Sum_probs=114.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++..+. ... .....++++++..+.++.+.+..                ....++|+.++.|   +|++|
T Consensus        69 ~l~~~~h~~vv~~~~-~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H---~dl~p  143 (285)
T cd06648          69 IMRDYQHPNIVEMYS-SYL-VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIH---RDIKS  143 (285)
T ss_pred             HHHHcCCCChheEEE-EEE-cCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeec---CCCCh
Confidence            566778877665443 333 34567888888877776654211                1134788776655   55569


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|..||.+
T Consensus       144 ~Nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slGv~l~ell~g~~p~~~  217 (285)
T cd06648         144 DSILLTSDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPY-WMAPEVISR----LPYGTEVDIWSLGIMVIEMVDGEPPYFN  217 (285)
T ss_pred             hhEEEcCCCcEEEcccccchhhccCCcc-cccccCCcc-ccCHHHhcC----CCCCCcccHHHHHHHHHHHHhCCCCCcC
Confidence            9999999999999999987654332211 112456777 999999877    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                       ..+......+..+.++.+. +..++..+.++++
T Consensus       218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  250 (285)
T cd06648         218 -EPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLD  250 (285)
T ss_pred             -CCHHHHHHHHHhcCCCCCcccccCCHHHHHHHH
Confidence             4555555555545433332 2237788888876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.88  E-value=5.2e-21  Score=139.58  Aligned_cols=166  Identities=16%  Similarity=0.187  Sum_probs=111.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.+.|++++ .+.+... +....++++++..+.++.+.+..                  ....++|..+++|   +|
T Consensus        44 ~~l~~l~~~~i~-~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h---~d  118 (251)
T cd05041          44 EILKQYDHPNIV-KLIGVCV-QKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIH---RD  118 (251)
T ss_pred             HHHHhCCCCCeE-EEEEEEe-cCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeh---hh
Confidence            367778887765 4444444 45567888888877776654311                  1124677666555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhc-ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRG-LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ++|+||+++.++.++|+|||.+........... .....+.. |+|||.+.+    ..++.++|+||+|+++|+|++ |.
T Consensus       119 i~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~i~~~l~t~~~  193 (251)
T cd05041         119 LAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK-WTAPEALNY----GRYTSESDVWSYGILLWETFSLGD  193 (251)
T ss_pred             cCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec-cCChHhhcc----CCCCcchhHHHHHHHHHHHHhccC
Confidence            559999999999999999999876542221101 11122334 999999887    678899999999999999999 89


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+. ........+..+...+. +...+.++.++++
T Consensus       194 ~p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  229 (251)
T cd05041         194 TPYPGM-SNQQTRERIESGYRMPA-PQLCPEEIYRLML  229 (251)
T ss_pred             CCCccC-CHHHHHHHHhcCCCCCC-CccCCHHHHHHHH
Confidence            999873 33344444444433333 5567888888875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.88  E-value=5.9e-21  Score=148.33  Aligned_cols=121  Identities=21%  Similarity=0.212  Sum_probs=85.8

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++|   +|+||+||+++.++.+||+|||+++....... .......++.. |+|||.+..    ..++.++|+
T Consensus       253 ~~LH~~~ivH---rdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv  324 (401)
T cd05107         253 EFLASKNCVH---RDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLK-WMAPESIFN----NLYTTLSDV  324 (401)
T ss_pred             HHHhcCCcCc---ccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCc-eeChHHhcC----CCCCcHhHH
Confidence            4777776555   55559999999999999999999876432211 00111344556 999999987    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHH-HhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQ-VVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~-i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+|+++|+|++ |..||... ...+.... +..+..+.. |..++.+++++++
T Consensus       325 wslGvil~e~l~~g~~P~~~~-~~~~~~~~~~~~~~~~~~-p~~~~~~l~~li~  376 (401)
T cd05107         325 WSFGILLWEIFTLGGTPYPEL-PMNEQFYNAIKRGYRMAK-PAHASDEIYEIMQ  376 (401)
T ss_pred             HHHHHHHHHHHHcCCCCCCCC-CchHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            999999999998 89999873 33343333 344544444 4557888888775

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.87  E-value=1.2e-21  Score=145.19  Aligned_cols=164  Identities=24%  Similarity=0.319  Sum_probs=113.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++... +... +...+++++|+..++++.+.+..                ....|+|..+++   |+|++|
T Consensus        55 ~l~~l~h~~i~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~iv---H~dl~p  129 (277)
T cd06642          55 VLSQCDSPYITRYY-GSYL-KGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKI---HRDIKA  129 (277)
T ss_pred             HHHcCCCCccHhhh-cccc-cCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCee---ccCCCh
Confidence            56667777776433 3333 45668899999888777664311                112477776555   455669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++++|||++......... .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|..||..
T Consensus       130 ~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~  203 (277)
T cd06642         130 ANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPF-WMAPEVIKQ----SAYDFKADIWSLGITAIELAKGEPPNSD  203 (277)
T ss_pred             heEEEeCCCCEEEccccccccccCcchh-hhcccCccc-ccCHHHhCc----CCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence            9999999999999999998765443221 122456667 999999987    6788899999999999999999999976


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                       ..+......+..+.++.+ +...+.++.+++.
T Consensus       204 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  234 (277)
T cd06642         204 -LHPMRVLFLIPKNSPPTL-EGQYSKPFKEFVE  234 (277)
T ss_pred             -cchhhHHhhhhcCCCCCC-CcccCHHHHHHHH
Confidence             334344444434444444 3456777777765

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.87  E-value=9.7e-22  Score=147.20  Aligned_cols=165  Identities=19%  Similarity=0.306  Sum_probs=111.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++..+.. .. .+...++++++...+++.+.+..                ....+||+.+++   |+|++|
T Consensus        71 ~l~~l~hp~i~~~~~~-~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv---H~dl~p  145 (297)
T cd06659          71 IMRDYQHQNVVEMYKS-YL-VGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVI---HRDIKS  145 (297)
T ss_pred             HHHhCCCCchhhhhhh-ee-eCCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCee---cCCCCH
Confidence            5566778776543333 22 35667889998877666553211                112477776654   556669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||++......... .....++.. |+|||.+.+    ..++.++|+||+||++|+|++|+.||..
T Consensus       146 ~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g~~p~~~  219 (297)
T cd06659         146 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPY-WMAPEVISR----TPYGTEVDIWSLGIMVIEMVDGEPPYFS  219 (297)
T ss_pred             HHeEEccCCcEEEeechhHhhccccccc-ccceecCcc-ccCHHHHcc----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999988654433221 122456777 999999987    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                       ..+.+.+..+.....+... +..++..+.++++
T Consensus       220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  252 (297)
T cd06659         220 -DSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLE  252 (297)
T ss_pred             -CCHHHHHHHHhccCCCCccccCCCCHHHHHHHH
Confidence             3444544444333222221 2356777888775

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.87  E-value=5.4e-21  Score=140.79  Aligned_cols=166  Identities=22%  Similarity=0.262  Sum_probs=114.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .+... +...+++++++..++++.+.+..                  ....+||+.+++|   +|
T Consensus        57 ~~l~~l~h~~i~~~-~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H---~d  131 (266)
T cd05033          57 SIMGQFDHPNIIRL-EGVVT-KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVH---RD  131 (266)
T ss_pred             HHHHhCCCCCcceE-eEEEe-cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc---CC
Confidence            36778888877643 44433 45667889998887777664311                  0124777766555   45


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc-cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL-YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      +||+||+++.++.++|+|||.+...........+ ...++.. |+|||.+..    ..++.++|+||+|+++|++++ |.
T Consensus       132 i~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~~Pe~~~~----~~~~~~~Dv~slG~~l~~l~~~g~  206 (266)
T cd05033         132 LAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIR-WTAPEAIAY----RKFTSASDVWSFGIVMWEVMSYGE  206 (266)
T ss_pred             CCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCcc-ccChhhhcc----CCCccccchHHHHHHHHHHHccCC
Confidence            5599999999999999999998776421111011 1223345 999999887    678899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||... ...+....+..+...+. +..+|+.+.+++.
T Consensus       207 ~p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  242 (266)
T cd05033         207 RPYWDM-SNQDVIKAVEDGYRLPP-PMDCPSALYQLML  242 (266)
T ss_pred             CCCCCC-CHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            999773 44444555555544444 4567888888774

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.87  E-value=4.6e-21  Score=140.26  Aligned_cols=161  Identities=17%  Similarity=0.168  Sum_probs=111.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++..... ..  ....++++++..++++.+.+..                   ....++|+.+++|   +
T Consensus        51 ~~l~~~~~~~i~~~~~~-~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H---~  124 (254)
T cd05083          51 AVMTKLHHKNLVRLLGV-IL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVH---R  124 (254)
T ss_pred             HHHHhCCCCCcCeEEEE-Ec--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeec---c
Confidence            35677888888755433 33  2346888999887777654321                   0124777766554   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+........   . ...... |+|||.+..    ..++.++|+||+|+++|+|++ |.
T Consensus       125 dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~---~-~~~~~~-y~~pe~~~~----~~~~~~~Dv~slG~~l~el~~~g~  195 (254)
T cd05083         125 DLAARNILVSEDGVAKVSDFGLARVGSMGVD---N-SKLPVK-WTAPEALKH----KKFSSKSDVWSYGVLLWEVFSYGR  195 (254)
T ss_pred             ccCcceEEEcCCCcEEECCCccceeccccCC---C-CCCCce-ecCHHHhcc----CCcCchhhHHHHHHHHHHHHhCCC
Confidence            5669999999999999999999865433211   1 223345 999999877    678899999999999999997 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||.+ ....+....+..+..+.. +..+|+.++++++
T Consensus       196 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  231 (254)
T cd05083         196 APYPK-MSLKEVKECVEKGYRMEP-PEGCPADVYVLMT  231 (254)
T ss_pred             CCCcc-CCHHHHHHHHhCCCCCCC-CCcCCHHHHHHHH
Confidence            99987 344444444555544433 4567888888875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=3.4e-21  Score=143.24  Aligned_cols=165  Identities=26%  Similarity=0.443  Sum_probs=114.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++..... .. +...+++++||..++++.+.+..                 ....|||..+  ++.|++++
T Consensus        56 ~l~~l~h~~i~~~~~~-~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~  131 (284)
T cd06620          56 IMHECRSPYIVSFYGA-FL-NENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIK  131 (284)
T ss_pred             HHHHcCCCCcceEeee-Ee-cCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCC
Confidence            5667777777655433 33 34678899999988887654311                 0124666531  35666777


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||++........   ....++.. |+|||++..    ..++.++|+||+||++|++++|..||.
T Consensus       132 p~nil~~~~~~~~l~d~gl~~~~~~~~~---~~~~~~~~-~~aPE~~~~----~~~~~~~Di~slG~~l~~l~tg~~p~~  203 (284)
T cd06620         132 PSNILVNSRGQIKLCDFGVSGELINSIA---DTFVGTST-YMSPERIQG----GKYTVKSDVWSLGISIIELALGKFPFA  203 (284)
T ss_pred             HHHEEECCCCcEEEccCCcccchhhhcc---CccccCcc-cCCHHHHcc----CCCCccchHHHHHHHHHHHHhCCCCCc
Confidence            9999999999999999998865433222   22467777 999999887    678889999999999999999999998


Q ss_pred             CCCCc----------HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        147 TWGSP----------FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~----------~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .....          .+....+....++.++...++.++.++++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  247 (284)
T cd06620         204 FSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVD  247 (284)
T ss_pred             ccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHH
Confidence            63221          12334444455555544457888888775

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1187|consensus

Probab=99.87  E-value=4.4e-22  Score=152.02  Aligned_cols=137  Identities=18%  Similarity=0.150  Sum_probs=105.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +++..+.|+|++..+....+ .+...++|+||..+++|.+.|..                   -...|||....-.+.||
T Consensus       123 ~~ls~l~H~Nlv~LlGyC~e-~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHr  201 (361)
T KOG1187|consen  123 EILSRLRHPNLVKLLGYCLE-GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHR  201 (361)
T ss_pred             HHHhcCCCcCcccEEEEEec-CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecC
Confidence            36777888887755444444 33368999999999999776421                   12358887665567888


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCc-hhhhhcccC-CCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDD-LLIIRGLYG-ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~-~~~~~~~~~-~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+||+|||+|.+...||+|||+|+.... ...  .... .|+.. |++||....    +..+.++|+||||+++.|++||
T Consensus       202 DiKssNILLD~~~~aKlsDFGLa~~~~~~~~~--~~~~~~gt~g-Y~~PEy~~~----g~lt~KsDVySFGVvllElitg  274 (361)
T KOG1187|consen  202 DIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS--VSTTVMGTFG-YLAPEYAST----GKLTEKSDVYSFGVVLLELITG  274 (361)
T ss_pred             CCCHHHeeECCCCCEEccCccCcccCCccccc--eeeecCCCCc-cCChhhhcc----CCcCcccccccchHHHHHHHhC
Confidence            8889999999999999999999966554 221  1112 67778 999999987    7888999999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      +.|...
T Consensus       275 r~~~d~  280 (361)
T KOG1187|consen  275 RKAVDQ  280 (361)
T ss_pred             CcccCC
Confidence            988864

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.87  E-value=4.5e-21  Score=142.89  Aligned_cols=170  Identities=19%  Similarity=0.239  Sum_probs=112.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.++++++.+.+... .+..+++++|+..++++.+.+..                 ....++|+.+++|   +|+
T Consensus        56 ~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H---~dl  131 (290)
T cd05613          56 QVLEHIRQSPFLVTLHYAFQ-TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIY---RDI  131 (290)
T ss_pred             HHHHhcccCCChhceeeEee-cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeec---cCC
Confidence            35666766566666665555 45678899999888877664311                 1134777766555   556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||++...............++.. |+|||.+....  ..++.++|+||+|+++|+|++|..||
T Consensus       132 ~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~--~~~~~~~Dv~slG~~l~~ll~g~~p~  208 (290)
T cd05613         132 KLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIE-YMAPDIVRGGD--GGHDKAVDWWSMGVLMYELLTGASPF  208 (290)
T ss_pred             CHHHeEECCCCCEEEeeCccceecccccccccccccCCcc-cCChhhccCCC--CCCCccccHHHHHHHHHHHhcCCCCC
Confidence            6999999999999999999987654322211122456777 99999986511  24568899999999999999999999


Q ss_pred             CCCCC--cHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGS--PFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~--~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .....  ....+........+++ +..+++.++++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~  244 (290)
T cd05613         209 TVDGEKNSQAEISRRILKSEPPY-PQEMSALAKDIIQ  244 (290)
T ss_pred             CcCCccccHHHHHHHhhccCCCC-CccCCHHHHHHHH
Confidence            64211  1122222222223444 3457788888775

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=4.6e-21  Score=142.78  Aligned_cols=168  Identities=24%  Similarity=0.345  Sum_probs=114.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------H--HHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------L--RCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~--~~~~l~~~~~~h~~   61 (182)
                      ++++.++|+|++..+..+.......+++++|+..++++.+.+..                   +  ...|+|..+++|. 
T Consensus        51 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~-  129 (287)
T cd06621          51 EINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHR-  129 (287)
T ss_pred             HHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC-
Confidence            36777888887755544444455678899999887776543211                   0  1347777766555 


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        +++|+||+++.++.++|+|||++........   ....++.. |++||.+..    ..++.++|+||+|+++|+|++|
T Consensus       130 --dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~-y~~pE~~~~----~~~~~~~Dv~slG~il~~l~~g  199 (287)
T cd06621         130 --DIKPSNILLTRKGQVKLCDFGVSGELVNSLA---GTFTGTSF-YMAPERIQG----KPYSITSDVWSLGLTLLEVAQN  199 (287)
T ss_pred             --CCCHHHEEEecCCeEEEeecccccccccccc---ccccCCcc-ccCHHHhcC----CCCCchhhHHHHHHHHHHHHhC
Confidence              5559999999999999999999866543322   11345566 999999887    6788999999999999999999


Q ss_pred             CCCCCCC----CCcHHHHHHHhhCCCCCCCC-----CCCCHHHHHHhhh
Q psy17162        142 RFPYDTW----GSPFEQLKQVVQDDPPRLPP-----GEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~----~~~~~~~~~i~~~~~~~~~~-----~~~s~~~~~~i~~  181 (182)
                      ..||...    ..+.+....+.....+.++.     ..+++.+++++.+
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  248 (287)
T cd06621         200 RFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQ  248 (287)
T ss_pred             CCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHH
Confidence            9999763    12333333333323232221     1356778887754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.87  E-value=9.2e-22  Score=148.29  Aligned_cols=135  Identities=13%  Similarity=0.115  Sum_probs=94.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHH----------------------------HHHHHHHHHHHhh
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQ----------------------------KELETLRCIYIQD   54 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------------------~~l~~~~~~~l~~   54 (182)
                      .+++.++|+|++.....+...++..+++++++.... +.                            +.+.++  .|||+
T Consensus        50 ~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL--~~lH~  126 (317)
T cd07867          50 ALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHD-LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGI--HYLHA  126 (317)
T ss_pred             HHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCc-HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHH--HHHHh
Confidence            367778898877555545445666778888875532 21                            122333  37777


Q ss_pred             cchhcccccCCCCCcEEE----cCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         55 YHLCVRSTRYFSVDTFHQ----RLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        55 ~~~~h~~~~~lk~~nil~----~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .+++   |+|+||+||++    +.++.+||+|||+++........  ......++.. |+|||.+.+   ...++.++|+
T Consensus       127 ~~iv---H~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~---~~~~~~~~Di  199 (317)
T cd07867         127 NWVL---HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW-YRAPELLLG---ARHYTKAIDI  199 (317)
T ss_pred             CCEE---cCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceeccc-ccCcHHhcC---CCccCcHHHH
Confidence            7654   55566999999    45678999999999765433211  1122456777 999999875   1346789999


Q ss_pred             HHHHHHHHHHHhCCCCCCC
Q psy17162        129 WSLGISLIELATGRFPYDT  147 (182)
Q Consensus       129 wslg~~l~~l~~g~~pf~~  147 (182)
                      ||+||++|+|++|++||..
T Consensus       200 wSlG~il~el~tg~~~f~~  218 (317)
T cd07867         200 WAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             HhHHHHHHHHHhCCCCccc
Confidence            9999999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.87  E-value=5e-21  Score=144.02  Aligned_cols=133  Identities=21%  Similarity=0.324  Sum_probs=98.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++..+. ... ++..+++++||..++++.+++..                 ....|||+.  ..+.|+|+
T Consensus        51 ~~l~~l~h~~iv~~~~-~~~-~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl  126 (308)
T cd06615          51 KVLHECNSPYIVGFYG-AFY-SDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDV  126 (308)
T ss_pred             HHHHhCCCCCCCeEEE-EEe-eCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCC
Confidence            3677788887765543 333 45678899999888887665421                 113477762  13455666


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.++|+|||.+........   ....++.. |+|||.+.+    ..++.++|+||+|+++|+|++|..||
T Consensus       127 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~-~~aPE~~~~----~~~~~~~DiwslG~~l~~l~~g~~p~  198 (308)
T cd06615         127 KPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRS-YMSPERLQG----THYTVQSDIWSLGLSLVEMAIGRYPI  198 (308)
T ss_pred             ChHHEEEecCCcEEEccCCCccccccccc---ccCCCCcC-ccChhHhcC----CCCCccchHHHHHHHHHHHHhCCCCC
Confidence            69999999999999999998866543322   22567777 999999877    66788999999999999999999999


Q ss_pred             CC
Q psy17162        146 DT  147 (182)
Q Consensus       146 ~~  147 (182)
                      ..
T Consensus       199 ~~  200 (308)
T cd06615         199 PP  200 (308)
T ss_pred             CC
Confidence            65

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.87  E-value=4.8e-21  Score=142.02  Aligned_cols=166  Identities=17%  Similarity=0.168  Sum_probs=111.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------------H--HHHHHhhcchh
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------------L--RCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------------~--~~~~l~~~~~~   58 (182)
                      +++.+.|+|++... +....+....++++++...+++.+.+..                       +  ...|||+.+++
T Consensus        61 ~l~~l~h~ni~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~  139 (280)
T cd05043          61 LLYGLSHQNILPIL-HVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVI  139 (280)
T ss_pred             HHHhCCCCCCCeEE-EEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            46667888887544 4333345556777777665565543311                       0  12477776555


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                         |+|+||+||+++.++.+|++|||+++........ ......++.. |+|||.+..    ..++.++|+||+|+++|+
T Consensus       140 ---H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~-y~apE~~~~----~~~~~~~Di~slG~~l~e  211 (280)
T cd05043         140 ---HKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVK-WMALESLVN----KEYSSASDVWSFGVLLWE  211 (280)
T ss_pred             ---ecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchh-ccCHHHHhc----CCCCchhhHHHhHHHHHH
Confidence               5566699999999999999999999765332210 0111223445 999999987    678899999999999999


Q ss_pred             HHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        138 LAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +++ |+.||.. ..+.+....+..+..+.. +..+++++++++.
T Consensus       212 l~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  253 (280)
T cd05043         212 LMTLGQTPYVE-IDPFEMAAYLKDGYRLAQ-PINCPDELFAVMA  253 (280)
T ss_pred             HhcCCCCCcCc-CCHHHHHHHHHcCCCCCC-CCcCCHHHHHHHH
Confidence            998 9999987 355555555555544444 3456888888764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=8.7e-21  Score=138.87  Aligned_cols=161  Identities=16%  Similarity=0.240  Sum_probs=112.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++. +.+... +....++++|+....++.+++..                   ....|+|+.+++|++   
T Consensus        53 ~l~~l~~~~i~~-~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d---  127 (256)
T cd05039          53 VMTTLRHPNLVQ-LLGVVL-QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRD---  127 (256)
T ss_pred             HHHhcCCcceee-eEEEEc-CCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchh---
Confidence            677788877664 444444 35667889998877776664321                   113478877766655   


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.++|+|||.+........   . ...... |+|||.+..    ..++.++|+||+|+++|++++ |..
T Consensus       128 i~p~Nili~~~~~~~l~d~g~~~~~~~~~~---~-~~~~~~-~~ape~~~~----~~~~~~~Di~slG~il~~l~~~g~~  198 (256)
T cd05039         128 LAARNVLVSEDLVAKVSDFGLAKEASQGQD---S-GKLPVK-WTAPEALRE----KKFSTKSDVWSFGILLWEIYSFGRV  198 (256)
T ss_pred             cccceEEEeCCCCEEEcccccccccccccc---c-CCCccc-ccCchhhcC----CcCCcHHHHHHHHHHHHHHHhcCCC
Confidence            559999999999999999999877643222   1 223344 999999877    677889999999999999997 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. ....+....+..+..+.. +..+|+++.++++
T Consensus       199 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  233 (256)
T cd05039         199 PYPR-IPLKDVVPHVEKGYRMEA-PEGCPPEVYKVMK  233 (256)
T ss_pred             CCCC-CCHHHHHHHHhcCCCCCC-ccCCCHHHHHHHH
Confidence            9987 344444444444444444 4457888888875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.87  E-value=7.8e-21  Score=140.22  Aligned_cols=170  Identities=14%  Similarity=0.144  Sum_probs=110.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++..+.. .. +...+++++|+...+++.+.+..                     .+..|+|+.++   .|
T Consensus        48 ~~~~l~h~~iv~~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H  122 (268)
T cd05086          48 PYRILQHPNILQCLGQ-CV-EAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF---LH  122 (268)
T ss_pred             HHhccCCcchhheEEE-ec-CCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe---ec
Confidence            4566788887655443 33 34567899999988887664421                     01247777665   45


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCC---CCCCCCccchHHHHHHHHHHH
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSG---NPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +|+||+||+++.++.++|+|||.+........ .......++.. |+|||++....   ....++.++|+||+|+++|+|
T Consensus       123 ~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el  201 (268)
T cd05086         123 SDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLR-WLAPELVGEFHGGLITAEQTKPSNVWALGVTLWEL  201 (268)
T ss_pred             cCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCccc-ccCchhcccccCccccCCCCCcchhHHHHHHHHHH
Confidence            56669999999999999999998754322211 11122456666 99999875311   012456789999999999999


Q ss_pred             Hh-CCCCCCCCCCcHHHHHHHhhCCCCCCC----CCCCCHHHHHHhh
Q psy17162        139 AT-GRFPYDTWGSPFEQLKQVVQDDPPRLP----PGEFSSDFKDFIT  180 (182)
Q Consensus       139 ~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~~~~i~  180 (182)
                      ++ |..||.. ....+.+.++..+....++    +..+++.+.++++
T Consensus       202 ~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  247 (268)
T cd05086         202 FENAAQPYSH-LSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQ  247 (268)
T ss_pred             HhCCCCCCCC-CCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHH
Confidence            97 6788876 4555555555444322221    2246777777765

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.87  E-value=8.7e-22  Score=147.14  Aligned_cols=165  Identities=19%  Similarity=0.289  Sum_probs=112.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++...... . .....++++|+..++++.+.+..                ....|||+.+++   |+|+||
T Consensus        72 ~l~~l~h~~ii~~~~~~-~-~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~iv---H~dlkp  146 (292)
T cd06658          72 IMRDYHHENVVDMYNSY-L-VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI---HRDIKS  146 (292)
T ss_pred             HHHhCCCCcHHHHHHhe-e-cCCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe---ecCCCH
Confidence            45667777776433332 2 35567889999887776554311                123488887655   555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||++......... .....++.. |+|||.+..    ..++.++|+||+|+++|++++|..||.+
T Consensus       147 ~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slGvil~el~~g~~p~~~  220 (292)
T cd06658         147 DSILLTSDGRIKLSDFGFCAQVSKEVPK-RKSLVGTPY-WMAPEVISR----LPYGTEVDIWSLGIMVIEMIDGEPPYFN  220 (292)
T ss_pred             HHEEEcCCCCEEEccCcchhhccccccc-CceeecCcc-ccCHHHHcc----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999988654332221 122456677 999999877    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                       ..+......+....++.++ ....+..++++++
T Consensus       221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  253 (292)
T cd06658         221 -EPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLD  253 (292)
T ss_pred             -CCHHHHHHHHHhcCCCccccccccCHHHHHHHH
Confidence             3444444444444333332 2256778888775

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=6.9e-21  Score=139.69  Aligned_cols=158  Identities=18%  Similarity=0.136  Sum_probs=109.1

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      ..|+|++ .+.+... +...+++++|+..++++.+.+..                 ....|+|+.+++|+   |++|+||
T Consensus        54 ~~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~---dl~p~ni  128 (260)
T cd05611          54 GESPYVA-KLYYSFQ-SKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR---DIKPENL  128 (260)
T ss_pred             CCCCCee-eeeeeEE-cCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHe
Confidence            3455554 5555554 45678899999888776654311                 01347887765555   4559999


Q ss_pred             EEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q psy17162         71 HQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS  150 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~  150 (182)
                      +++.++.++|+|||.+......     ....++.. |++||.+.+    ..++.++|+||+|+++|++++|..||.. ..
T Consensus       129 l~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~-y~~pe~~~~----~~~~~~~Dv~slG~il~~l~~g~~p~~~-~~  197 (260)
T cd05611         129 LIDQTGHLKLTDFGLSRNGLEN-----KKFVGTPD-YLAPETILG----VGDDKMSDWWSLGCVIFEFLFGYPPFHA-ET  197 (260)
T ss_pred             EECCCCcEEEeecccceecccc-----ccCCCCcC-ccChhhhcC----CCCcchhhhHHHHHHHHHHHHCCCCCCC-CC
Confidence            9999999999999988664432     12456667 999999887    5678899999999999999999999987 34


Q ss_pred             cHHHHHHHhhCCCC--CCCCCCCCHHHHHHhhh
Q psy17162        151 PFEQLKQVVQDDPP--RLPPGEFSSDFKDFITL  181 (182)
Q Consensus       151 ~~~~~~~i~~~~~~--~~~~~~~s~~~~~~i~~  181 (182)
                      .......+..+...  ...+..+++++.+++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  230 (260)
T cd05611         198 PDAVFDNILSRRINWPEEVKEFCSPEAVDLINR  230 (260)
T ss_pred             HHHHHHHHHhcccCCCCcccccCCHHHHHHHHH
Confidence            44444444333211  11123578888888753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.87  E-value=6.6e-22  Score=145.37  Aligned_cols=165  Identities=18%  Similarity=0.255  Sum_probs=113.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++. +..+.. ....+.+++|+...+++.+.+...                   ++.|||+.+++|.++  
T Consensus        54 ~l~~l~h~ni~~-~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l--  129 (259)
T PF07714_consen   54 ILRKLRHPNIVK-LYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNL--  129 (259)
T ss_dssp             HHHTHSBTTBE--EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST---
T ss_pred             cccccccccccc-cccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            556677877765 445555 555588999999888887754321                   235788776555554  


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                       +++||+++.++.+||+|||++......... .......... |+|||.+..    ..++.++||||||+++||+++ |+
T Consensus       130 -~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~-~~aPE~~~~----~~~~~ksDVysfG~~l~ei~~~~~  203 (259)
T PF07714_consen  130 -SPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLR-YLAPEVLKD----GEYTKKSDVYSFGMLLYEILTLGK  203 (259)
T ss_dssp             -SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGG-GS-HHHHHH----SEESHHHHHHHHHHHHHHHHTTSS
T ss_pred             -ccccccccccccccccccccccccccccccccccccccccc-ccccccccc----cccccccccccccccccccccccc
Confidence             599999999999999999998765221110 0111223334 999999987    678899999999999999999 78


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+. ...+...++..+..+++ +..++..+.++++
T Consensus       204 ~p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  239 (259)
T PF07714_consen  204 FPFSDY-DNEEIIEKLKQGQRLPI-PDNCPKDIYSLIQ  239 (259)
T ss_dssp             GTTTTS-CHHHHHHHHHTTEETTS-BTTSBHHHHHHHH
T ss_pred             cccccc-cccccccccccccccee-ccchhHHHHHHHH
Confidence            999884 66566666666655554 5567888888765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.87  E-value=7.4e-21  Score=139.16  Aligned_cols=166  Identities=17%  Similarity=0.177  Sum_probs=112.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|++++. +.+... +...+++++++...+.+.+.+..                  ....++|+.+++|   +|
T Consensus        51 ~~l~~l~~~~i~~-~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h---~d  125 (256)
T cd05112          51 QVMMKLSHPKLVQ-LYGVCT-ERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIH---RD  125 (256)
T ss_pred             HHHHhCCCCCeee-EEEEEc-cCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc---cc
Confidence            3677788877654 444443 45567888988777666553311                  1124777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.++|+|||.+...............++.. |+|||.+.+    ..++.++|+||+|+++|++++ |..
T Consensus       126 l~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~-~~aPe~~~~----~~~~~~~Dv~slG~~l~el~~~g~~  200 (256)
T cd05112         126 LAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVK-WSSPEVFSF----SKYSSKSDVWSFGVLMWEVFSEGKT  200 (256)
T ss_pred             cccceEEEcCCCeEEECCCcceeecccCcccccCCCccchh-hcCHhHhcc----CCcChHHHHHHHHHHHHHHHcCCCC
Confidence            55999999999999999999886654332211111223345 999999887    678889999999999999998 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. .........+..+..+.. +...+.++.++++
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  235 (256)
T cd05112         201 PYEN-RSNSEVVETINAGFRLYK-PRLASQSVYELMQ  235 (256)
T ss_pred             CCCc-CCHHHHHHHHhCCCCCCC-CCCCCHHHHHHHH
Confidence            9987 344444555544443323 4556788888765

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.87  E-value=6.7e-21  Score=140.36  Aligned_cols=167  Identities=19%  Similarity=0.267  Sum_probs=114.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------H--HHHHHhhcchh
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------L--RCIYIQDYHLC   58 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------~--~~~~l~~~~~~   58 (182)
                      .+++.+.|+|++. +.+... +....++++++..++++.+.+..                      +  ...|+|+.+++
T Consensus        51 ~~l~~l~h~~i~~-~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~  128 (269)
T cd05044          51 HLMSNFNHPNIVK-LLGVCL-LNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFI  128 (269)
T ss_pred             HHHHhcCCCCeee-Eeeeec-CCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            3567778877764 344443 45568899998887777654421                      0  12477776655


Q ss_pred             cccccCCCCCcEEEcCCC-----eEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQF-----LLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~-----~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      |   +|++|+||+++.++     .++++|||++......... ......++.. |+|||.+..    ..++.++|+||||
T Consensus       129 H---~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG  200 (269)
T cd05044         129 H---RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVR-WMAPESLLD----GKFTTQSDVWSFG  200 (269)
T ss_pred             c---CCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCcc-ccCHHHHcc----CCcccchhHHHHH
Confidence            4   55569999999877     8999999998765332210 0111233455 999999987    7788999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        133 ISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       133 ~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +++|+|++ |..||.. ....+....+..+..+.. +...|+.+++++++
T Consensus       201 ~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  248 (269)
T cd05044         201 VLMWEILTLGQQPYPA-LNNQEVLQHVTAGGRLQK-PENCPDKIYQLMTN  248 (269)
T ss_pred             HHHHHHHHcCCCCCcc-cCHHHHHHHHhcCCccCC-cccchHHHHHHHHH
Confidence            99999998 9999987 344455555545544444 45678888888753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.87  E-value=5.4e-21  Score=140.89  Aligned_cols=165  Identities=22%  Similarity=0.234  Sum_probs=113.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .+... +...+++++|+..++++.+.+..                  ....++|+.+++|   +|+
T Consensus        58 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h---~dl  132 (267)
T cd05066          58 IMGQFDHPNIIHL-EGVVT-KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVH---RDL  132 (267)
T ss_pred             HHHhCCCCCcceE-EEEEe-cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEee---hhh
Confidence            5677888887654 44444 45578889999887777664321                  1124777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc--cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL--YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.++++|||.+...........+  ...++.. |++||.+..    ..++.++|+||+|+++|++++ |.
T Consensus       133 kp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~~pe~~~~----~~~~~~~Dv~slG~~l~ell~~g~  207 (267)
T cd05066         133 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-WTAPEAIAY----RKFTSASDVWSYGIVMWEVMSYGE  207 (267)
T ss_pred             chhcEEECCCCeEEeCCCCcccccccccceeeecCCCcccee-ecCHhHhcc----CccCchhhhHHHHHHHHHHhcCCC
Confidence            599999999999999999998765443221111  1112345 999999987    678899999999999999886 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. +..+++.+++++.
T Consensus       208 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  243 (267)
T cd05066         208 RPYWE-MSNQDVIKAIEEGYRLPA-PMDCPAALHQLML  243 (267)
T ss_pred             CCccc-CCHHHHHHHHhCCCcCCC-CCCCCHHHHHHHH
Confidence            99987 344455555555543333 3457788888765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.87  E-value=5.1e-21  Score=142.24  Aligned_cols=171  Identities=22%  Similarity=0.300  Sum_probs=111.2

Q ss_pred             HHHHh-CCCCcEEEEEEeee---cCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchh
Q psy17162          4 IRAVF-NQDEIGVTVSSVKT---TDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~   58 (182)
                      +++.+ +|+|++..+.....   .++..+++++|+..++++.+.+..                     ..+.|+|+.+++
T Consensus        67 ~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  146 (286)
T cd06638          67 ILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTI  146 (286)
T ss_pred             HHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            45566 56666544332221   244668899999887776543210                     123477777665


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~  137 (182)
                      |   +|+||+||+++.++.++|+|||++......... .....++.. |+|||.+.... ....++.++|+||+||++|+
T Consensus       147 H---~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e  221 (286)
T cd06638         147 H---RDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-RNTSVGTPF-WMAPEVIACEQQLDSTYDARCDVWSLGITAIE  221 (286)
T ss_pred             c---cCCCHHhEEECCCCCEEEccCCceeecccCCCc-cccccCCCc-ccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence            5   555599999999999999999998765432221 122456777 99999875311 01356789999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      |++|+.||... .+...+..+.....+.+. +..++++++++++
T Consensus       222 l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  264 (286)
T cd06638         222 LGDGDPPLADL-HPMRALFKIPRNPPPTLHQPELWSNEFNDFIR  264 (286)
T ss_pred             HhcCCCCCCCC-chhHHHhhccccCCCcccCCCCcCHHHHHHHH
Confidence            99999999873 443444443333323222 3456778888775

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.87  E-value=8.9e-21  Score=142.99  Aligned_cols=162  Identities=20%  Similarity=0.261  Sum_probs=112.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH--------------------HHHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK--------------------ELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++... ++.. +....++++|+..+ .+.+                    .+.+  ..|||+.+++|   +
T Consensus        74 ~l~~l~h~~iv~~~-~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~a--l~~LH~~gi~H---~  145 (313)
T cd06633          74 FLQQLKHPNTIEYK-GCYL-KEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQG--LAYLHSHNMIH---R  145 (313)
T ss_pred             HHHhCCCCCCccEE-EEEE-eCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHHCCeec---C
Confidence            66778887776543 3333 34567888887643 2222                    1222  34788776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |++|+||+++.++.++|+|||.+......     ....++.. |+|||.+.... ...++.++|+||+|+++|+|++|..
T Consensus       146 dl~p~nili~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~-y~aPE~~~~~~-~~~~~~~sDv~slGvil~el~~g~~  218 (313)
T cd06633         146 DIKAGNILLTEPGQVKLADFGSASKSSPA-----NSFVGTPY-WMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKP  218 (313)
T ss_pred             CCChhhEEECCCCCEEEeecCCCcccCCC-----CCcccccc-ccChhhccccC-CCCCCchhhHHHHHHHHHHHHhCCC
Confidence            55699999999999999999988653322     22567777 99999975211 1457789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ ........++.....+..+...++..+++++++
T Consensus       219 p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  255 (313)
T cd06633         219 PLFN-MNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDY  255 (313)
T ss_pred             CCCC-CChHHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence            9987 355566666655555555455678888988874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.87  E-value=4.6e-21  Score=140.93  Aligned_cols=166  Identities=16%  Similarity=0.258  Sum_probs=114.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|++++... +... +...+++++++..++++...+..                     ....++|+.++.|   
T Consensus        55 ~l~~~~~~~i~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h---  129 (267)
T cd08224          55 LLKQLDHPNVIKYL-ASFI-ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMH---  129 (267)
T ss_pred             HHHhCCCCCeeeee-eeee-cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEec---
Confidence            56677777765443 3333 34567889999887777554311                     0124777776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++|+|||.+......... .....++.. |+|||.+.+    ..++.++|+||+|+++|+|++|.
T Consensus       130 ~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-y~apE~~~~----~~~~~~~Di~slG~il~~l~~g~  203 (267)
T cd08224         130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPY-YMSPERIHE----NGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             CCcChhhEEECCCCcEEEeccceeeeccCCCcc-cceecCCcc-ccCHHHhcc----CCCCchhcHHHHHHHHHHHHHCC
Confidence            555599999999999999999988665432211 111456667 999999887    67889999999999999999999


Q ss_pred             CCCCCCCCc-HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSP-FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||...... .+....+..+..++.|...++..++++++
T Consensus       204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  242 (267)
T cd08224         204 SPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVS  242 (267)
T ss_pred             CCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHH
Confidence            999663222 23334444555566654467788888775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.87  E-value=2.8e-21  Score=143.81  Aligned_cols=125  Identities=43%  Similarity=0.747  Sum_probs=88.2

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .|+|+.  .++.|+|+||+||+++.++.++|+|||++........  .....++.. |+|||.+.... ...++.++|+|
T Consensus       121 ~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~~~-~~~~~~~~Di~  194 (288)
T cd06616         121 NYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA--KTRDAGCRP-YMAPERIDPSA-RDGYDVRSDVW  194 (288)
T ss_pred             HHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc--cccccCccC-ccCHHHhcccc-ccCCcchhhhh
Confidence            366653  1345666779999999999999999999866543322  122456677 99999987611 02577899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCC---CCCHHHHHHhh
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG---EFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~---~~s~~~~~~i~  180 (182)
                      |+|+++|++++|+.||.......+.+..+..+.++.+++.   .++.++.+|++
T Consensus       195 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  248 (288)
T cd06616         195 SLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFIN  248 (288)
T ss_pred             HHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHH
Confidence            9999999999999999874433344444444544544432   47888888875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.87  E-value=6.3e-21  Score=139.38  Aligned_cols=163  Identities=14%  Similarity=0.229  Sum_probs=114.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++... +... ....+++++++..++++.+.+..                 +  ...+||+.+++|   +|
T Consensus        52 ~l~~~~~~~i~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h---~d  126 (256)
T cd08220          52 VLKLLSHPNIIEYY-ENFL-EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILH---RD  126 (256)
T ss_pred             HHhhCCCCchhhee-eeEe-cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec---CC
Confidence            56777887776443 3333 45667899998877666554321                 0  124677765555   55


Q ss_pred             CCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ++|+||+++.+ +.++|+|||.+........  .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|..
T Consensus       127 l~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~~l~~l~~~~~  199 (256)
T cd08220         127 LKTQNILLDKHKMVVKIGDFGISKILSSKSK--AYTVVGTPC-YISPELCEG----KPYNQKSDIWALGCVLYELASLKR  199 (256)
T ss_pred             CCHHHEEEcCCCCEEEEccCCCceecCCCcc--ccccccCCc-ccCchhccC----CCCCcccchHHHHHHHHHHHhCCC
Confidence            55999999865 4689999999877654322  222456667 999999987    667889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ .........+..+...++ +..+++++++++.
T Consensus       200 ~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  234 (256)
T cd08220         200 AFEA-ANLPALVLKIMSGTFAPI-SDRYSPDLRQLIL  234 (256)
T ss_pred             Cccc-CchHHHHHHHHhcCCCCC-CCCcCHHHHHHHH
Confidence            9987 344455556666655555 4567888888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0695|consensus

Probab=99.87  E-value=2.1e-21  Score=142.69  Aligned_cols=155  Identities=17%  Similarity=0.220  Sum_probs=107.8

Q ss_pred             CcEEEEEEeeecCCCceEEEeccCccchHH--------------HHHHHHHHHHHhhcchhcccccCCCCCcEEEcCCCe
Q psy17162         12 EIGVTVSSVKTTDDKKVVLVTGKGEAEKVQ--------------KELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFL   77 (182)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------------~~l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~   77 (182)
                      ++++-+....+ ++..++.+-||..++++.              ++.++.....||.+|..++..||+|.+|+|+++.|+
T Consensus       311 pflvglhscfq-tesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh  389 (593)
T KOG0695|consen  311 PFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH  389 (593)
T ss_pred             CeEEehhhhhc-ccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc
Confidence            33443334444 455566677777766641              123333223333333344455556699999999999


Q ss_pred             EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC------CCCc
Q psy17162         78 LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT------WGSP  151 (182)
Q Consensus        78 ~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~------~~~~  151 (182)
                      +||+|+|+.+.--.+....++ +||++. |.|||.+.+    ..|+.++|+|++|++++||+.|..||..      ..+.
T Consensus       390 ikltdygmcke~l~~gd~tst-fcgtpn-yiapeilrg----eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt  463 (593)
T KOG0695|consen  390 IKLTDYGMCKEGLGPGDTTST-FCGTPN-YIAPEILRG----EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT  463 (593)
T ss_pred             eeecccchhhcCCCCCccccc-ccCCCc-ccchhhhcc----cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch
Confidence            999999998775444444455 999999 999999999    8999999999999999999999999963      2345


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCHH
Q psy17162        152 FEQLKQVVQDDPPRLPPGEFSSD  174 (182)
Q Consensus       152 ~~~~~~i~~~~~~~~~~~~~s~~  174 (182)
                      .+.+++++-...-++ |..+|-.
T Consensus       464 edylfqvilekqiri-prslsvk  485 (593)
T KOG0695|consen  464 EDYLFQVILEKQIRI-PRSLSVK  485 (593)
T ss_pred             hHHHHHHHhhhcccc-cceeehh
Confidence            677888766655667 3434433

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=8e-21  Score=139.08  Aligned_cols=164  Identities=16%  Similarity=0.173  Sum_probs=112.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+.|+|++. +.+....  ..+++++|+...+++.+.+..                   ...+++|..+++|   +|
T Consensus        49 ~l~~l~h~~iv~-~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H---~d  122 (257)
T cd05040          49 IMHSLDHENLIR-LYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIH---RD  122 (257)
T ss_pred             HHhhcCCCCccc-eeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccc---cc
Confidence            566778877664 4444443  677889998877777654311                   1124777776655   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      ++|+||+++.++.+||+|||.+.........  ......++.. |+|||.+..    ..++.++|+||+||++|+|++ |
T Consensus       123 i~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~~pE~~~~----~~~~~~~Di~slG~~l~el~t~g  197 (257)
T cd05040         123 LAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFA-WCAPESLRT----RTFSHASDVWMFGVTLWEMFTYG  197 (257)
T ss_pred             cCcccEEEecCCEEEeccccccccccccccceecccCCCCCce-ecCHHHhcc----cCcCchhhhHHHHHHHHHHHhCC
Confidence            5599999999999999999998776442210  0111334456 999999887    678899999999999999998 9


Q ss_pred             CCCCCCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..||.. ....+....+.. +..... +...|..+.+++.
T Consensus       198 ~~p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  235 (257)
T cd05040         198 EEPWAG-LSGSQILKKIDKEGERLER-PEACPQDIYNVML  235 (257)
T ss_pred             CCCCCC-CCHHHHHHHHHhcCCcCCC-CccCCHHHHHHHH
Confidence            999977 344444444442 222222 4456788888765

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.87  E-value=4.1e-21  Score=141.42  Aligned_cols=169  Identities=16%  Similarity=0.174  Sum_probs=110.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++... +... +...+++++|+...+++.+.+..                 ....|+|+.+++|   +|++
T Consensus        59 ~l~~~~h~~ii~~~-~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H---~dl~  133 (267)
T cd06646          59 MVKECKHCNIVAYF-GSYL-SREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMH---RDIK  133 (267)
T ss_pred             HHHhcCCCCeeeee-EEEE-eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cCCC
Confidence            56677888876543 3333 45677899999887777654310                 1234777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||++......... .....++.. |+|||.+.... ...++.++|+||+||++|+|++|+.||.
T Consensus       134 p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~~~-~~~~~~~~Dvws~G~il~el~~g~~p~~  210 (267)
T cd06646         134 GANILLTDNGDVKLADFGVAAKITATIAK-RKSFIGTPY-WMAPEVAAVEK-NGGYNQLCDIWAVGITAIELAELQPPMF  210 (267)
T ss_pred             HHHEEECCCCCEEECcCccceeecccccc-cCccccCcc-ccCHhHccccc-CCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence            99999999999999999998765432221 122456667 99999875311 1456788999999999999999999997


Q ss_pred             CCCCcHHHHHHHhhC-CC-CCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQD-DP-PRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~-~~-~~~~-~~~~s~~~~~~i~~  181 (182)
                      .. .+.+....+... .. +.++ ...+|..+++++++
T Consensus       211 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  247 (267)
T cd06646         211 DL-HPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKI  247 (267)
T ss_pred             cc-chhhhheeeecCCCCCCCCccccccCHHHHHHHHH
Confidence            62 333333332221 11 1111 23578889998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.87  E-value=8.1e-21  Score=139.91  Aligned_cols=165  Identities=22%  Similarity=0.228  Sum_probs=111.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++. +.+... +...+++++|+...+++.+.+..                  ....++|+.+++   |+|+
T Consensus        59 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~---H~dl  133 (268)
T cd05063          59 IMGQFSHHNIIR-LEGVVT-KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYV---HRDL  133 (268)
T ss_pred             HHhcCCCCCeeE-EEEEEc-cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee---cccc
Confidence            566777877654 444444 44567899998887777654311                  113477777655   5555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhccc--CCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLY--GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~--~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.++++|||++.............  ...... |+|||.+..    ..++.++|+||+|+++|++++ |.
T Consensus       134 kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Dv~slG~il~ell~~g~  208 (268)
T cd05063         134 AARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIR-WTAPEAIAY----RKFTSASDVWSFGIVMWEVMSFGE  208 (268)
T ss_pred             chhhEEEcCCCcEEECCCccceecccccccceeccCCCcCce-ecCHHHhhc----CCcChHhHHHHHHHHHHHHHhCCC
Confidence            5999999999999999999987654322111110  112234 999999887    678899999999999999997 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.. ....+....+..+...+. +...++++++++.
T Consensus       209 ~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~  244 (268)
T cd05063         209 RPYWD-MSNHEVMKAINDGFRLPA-PMDCPSAVYQLML  244 (268)
T ss_pred             CCCCc-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            99987 344455555555443333 3456777777664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.87  E-value=8.2e-21  Score=139.68  Aligned_cols=167  Identities=19%  Similarity=0.239  Sum_probs=114.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.+... +...+++++|+..++++.+.+..                 ....++|+.++.|   +|+
T Consensus        54 ~~l~~l~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H---~dl  128 (265)
T cd06631          54 DLLKSLKHVNIVQ-YLGTCL-DDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVH---RDI  128 (265)
T ss_pred             HHHHhcCCCCEee-EeeEee-cCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc---CCc
Confidence            3667788877654 444444 34678899999888777664321                 0134788776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchh-----hhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLL-----IIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~-----~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      +|+||+++.++.++|+|||.+.......     ........++.. |+|||.+..    ..++.++|+||+|+++|++++
T Consensus       129 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~  203 (265)
T cd06631         129 KGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPY-WMAPEVINE----SGYGRKSDIWSIGCTVFEMAT  203 (265)
T ss_pred             CHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCcc-ccChhhhcC----CCCcchhhHHHHHHHHHHHHh
Confidence            5999999999999999999886542211     000111346667 999999987    677899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhh--CCCCCCCCCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQ--DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |..||... ........+..  +..+.+ +..++.++++++++
T Consensus       204 g~~p~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~  244 (265)
T cd06631         204 GKPPLASM-DRLAAMFYIGAHRGLMPRL-PDSFSAAAIDFVTS  244 (265)
T ss_pred             CCCccccC-ChHHHHHHhhhccCCCCCC-CCCCCHHHHHHHHH
Confidence            99999873 33333333332  233344 45688889888863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.87  E-value=9e-21  Score=139.16  Aligned_cols=171  Identities=19%  Similarity=0.299  Sum_probs=115.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~l   65 (182)
                      ++++.++|++++ .+..... +...+++++|+....++.+.+..               +  ...++|+.++.|   +|+
T Consensus        51 ~~~~~l~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H---~dl  125 (264)
T cd06626          51 KVLELLKHPNLV-KYYGVEV-HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVH---RDI  125 (264)
T ss_pred             HHHHhCCCCChh-heeeeEe-cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCccc---CCC
Confidence            367778887765 3344433 45667889998877776664311               0  134777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc---cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL---YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+++.++.+||+|||.+............   ...++.. |++||.+.... ...++.++|+||+|+++|++++|.
T Consensus       126 ~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~PE~~~~~~-~~~~~~~~Dv~s~G~il~~l~~g~  203 (264)
T cd06626         126 KPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPA-YMAPEVITGGK-GKGHGRAADIWSLGCVVLEMATGK  203 (264)
T ss_pred             CHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcC-ccChhhccCCC-CCCCCcccchHHHHHHHHHHHhCC
Confidence            599999999999999999998776543221111   1345556 99999987611 013778999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCC-CCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPG-EFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~-~~s~~~~~~i~  180 (182)
                      .||.+..........+..+..+.+|+. .+++.+.++++
T Consensus       204 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (264)
T cd06626         204 RPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLD  242 (264)
T ss_pred             CCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHH
Confidence            999774344444444445555556433 45888888875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.87  E-value=7.6e-21  Score=140.87  Aligned_cols=166  Identities=16%  Similarity=0.163  Sum_probs=111.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|++++. +.+... ....+++++++..++++.+.+..                   ....++|+.+++|   +
T Consensus        45 ~~l~~l~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H---~  119 (277)
T cd05577          45 KILEKVSSRFIVS-LAYAFE-TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVY---R  119 (277)
T ss_pred             HHHHhCCCCCEee-eeeEEe-cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCccc---C
Confidence            3677788766554 444444 45668899999887776654311                   1124777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |++|+||+++.++.++|+|||.+........  .....++.. |++||.+.+    ..++.++|+||+|+++|+|++|+.
T Consensus       120 di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~il~~l~~g~~  192 (277)
T cd05577         120 DLKPENVLLDDHGNVRISDLGLAVELKGGKK--IKGRAGTPG-YMAPEVLQG----EVYDFSVDWFALGCTLYEMIAGRS  192 (277)
T ss_pred             CCCHHHEEECCCCCEEEccCcchhhhccCCc--cccccCCCC-cCCHHHhcC----CCCCchhhhHHHHHHHHHHhhCCC
Confidence            5559999999999999999998865433221  111345556 999999877    668889999999999999999999


Q ss_pred             CCCCCCC--cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGS--PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~--~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.....  ....+.......+..+ +..+++.+++++++
T Consensus       193 p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  231 (277)
T cd05577         193 PFRQRKEKVEKEELKRRTLEMAVEY-PDKFSPEAKDLCEA  231 (277)
T ss_pred             CCCCCcccccHHHHHhccccccccC-CccCCHHHHHHHHH
Confidence            9976322  1222222222333334 34578888888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=7.1e-21  Score=147.69  Aligned_cols=132  Identities=15%  Similarity=0.109  Sum_probs=95.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++..+.. .. ....+++++++... ++.+.+                   .+  ..|||+.+++|   +
T Consensus       138 ~il~~l~h~~iv~~~~~-~~-~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~a--L~~LH~~givH---r  209 (392)
T PHA03207        138 DILKTISHRAIINLIHA-YR-WKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEA--LAYLHGRGIIH---R  209 (392)
T ss_pred             HHHHhcCCCCccceeee-Ee-eCCEEEEEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHH--HHHHHHCCccc---c
Confidence            47888899888754433 33 34457777776542 333322                   22  34787776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||||+||+++.++.++|+|||++......... ......|+.. |+|||++..    ..++.++|+||+||++|+|++|.
T Consensus       210 Dlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~DvwslGvil~el~~g~  284 (392)
T PHA03207        210 DVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLE-TNSPELLAL----DPYCAKTDIWSAGLVLFEMSVKN  284 (392)
T ss_pred             CCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccC-ccCHhHhcC----CCCCchhhHHHHHHHHHHHHHCC
Confidence            55599999999999999999998765433221 1122567788 999999987    77889999999999999999999


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      .||.+
T Consensus       285 ~pf~~  289 (392)
T PHA03207        285 VTLFG  289 (392)
T ss_pred             CCCCC
Confidence            99976

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.87  E-value=2.4e-21  Score=147.78  Aligned_cols=140  Identities=19%  Similarity=0.251  Sum_probs=94.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHH------------------HHHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQK------------------ELETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~------------------~l~~~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++.....+...    ....+++++++. ..++.+                  .+.++  .|||+.+++| 
T Consensus        66 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL--~~LH~~~ivH-  141 (343)
T cd07878          66 RLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGL--KYIHSAGIIH-  141 (343)
T ss_pred             HHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeec-
Confidence            367788888876433222211    123456666654 233332                  22333  3888776555 


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                        +|+||+||+++.++.+||+|||++.......    ....++.. |+|||++.+   ...++.++|+||+||++|+|++
T Consensus       142 --rdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~el~~  211 (343)
T cd07878         142 --RDLKPSNVAVNEDCELRILDFGLARQADDEM----TGYVATRW-YRAPEIMLN---WMHYNQTVDIWSVGCIMAELLK  211 (343)
T ss_pred             --ccCChhhEEECCCCCEEEcCCccceecCCCc----CCcccccc-ccCchHhcC---CccCCchhhhHhHHHHHHHHHH
Confidence              5555999999999999999999987654322    22567778 999999865   1357789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHH
Q psy17162        141 GRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~  157 (182)
                      |+.||.+ ....+.+..
T Consensus       212 g~~pf~~-~~~~~~~~~  227 (343)
T cd07878         212 GKALFPG-NDYIDQLKR  227 (343)
T ss_pred             CCCCCCC-CCHHHHHHH
Confidence            9999987 333343333

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.87  E-value=1.2e-20  Score=140.26  Aligned_cols=165  Identities=21%  Similarity=0.275  Sum_probs=114.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.... ... .....++++++..+.++.+.+...                  ...++|..+++|   +++
T Consensus        68 ~l~~l~~~~i~~~~~-~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H---~dl  142 (286)
T cd06614          68 IMKDCKHPNIVDYYD-SYL-VGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIH---RDI  142 (286)
T ss_pred             HHHHCCCCCeeEEEE-EEE-ECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeee---CCC
Confidence            566778877654433 333 236678899988877777654321                  124677766555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |++||.+..    ..++.++|+||+|+++|+|++|..||
T Consensus       143 ~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~----~~~~~~~Dv~slGvil~~l~~g~~p~  216 (286)
T cd06614         143 KSDNILLSKDGSVKLADFGFAAQLTKEKSK-RNSVVGTPY-WMAPEVIKR----KDYGPKVDIWSLGIMCIEMAEGEPPY  216 (286)
T ss_pred             ChhhEEEcCCCCEEECccchhhhhccchhh-hccccCCcc-cCCHhHhcC----CCCCCccccHHHHHHHHHHHhCCCCC
Confidence            599999999999999999987655433221 122345666 999999887    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      .. ..+......+.....+.++ +..++.+++++++
T Consensus       217 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (286)
T cd06614         217 LR-EPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN  251 (286)
T ss_pred             CC-CCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHH
Confidence            87 3444444444444444443 2247888988876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=6.2e-21  Score=143.81  Aligned_cols=167  Identities=20%  Similarity=0.229  Sum_probs=113.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+.|++++.. .+... +...+++++++..++++.+.+..                   ....|||+.+++|   +
T Consensus        53 ~~l~~l~~~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H---~  127 (316)
T cd05574          53 EILATLDHPFLPTL-YASFQ-TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVY---R  127 (316)
T ss_pred             HHHHhCCCCCchhh-eeeee-cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeec---c
Confidence            35677787766544 44443 45678899999888777664321                   1134788776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh----------------------------hcccCCCCCCcccCccccCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII----------------------------RGLYGADCDPNFIRPERIDP  115 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~----------------------------~~~~~~~~~~~~~aPe~~~~  115 (182)
                      |+||+||+++.++.++|+|||.+.........                            ......|+.. |+|||.+.+
T Consensus       128 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-y~aPE~~~~  206 (316)
T cd05574         128 DLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEE-YIAPEVISG  206 (316)
T ss_pred             CCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccC-CcCHHHHcC
Confidence            55599999999999999999987654321100                            0111356667 999999987


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCC-CCCCHHHHHHhhh
Q psy17162        116 SGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP-GEFSSDFKDFITL  181 (182)
Q Consensus       116 ~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~~~~i~~  181 (182)
                          ..++.++|+||+|+++|+|++|..||.+ .........+.... +.++. ...++++++++++
T Consensus       207 ----~~~~~~~Di~slG~ll~~l~~g~~pf~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  267 (316)
T cd05574         207 ----DGHGSAVDWWTLGILLYEMLYGTTPFKG-SNRDETFSNILKKE-VTFPGSPPVSSSARDLIRK  267 (316)
T ss_pred             ----CCCCchHHHHHHHHHHHHHhhCCCCCCC-CchHHHHHHHhcCC-ccCCCccccCHHHHHHHHH
Confidence                6788999999999999999999999987 34444444444333 33332 2368888888763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.87  E-value=6.1e-21  Score=143.00  Aligned_cols=132  Identities=17%  Similarity=0.180  Sum_probs=93.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.+.|+|++ .+.+... +...+++++++... ++.+.+                    .+  ..++|+.+++|   
T Consensus        56 ~~l~~l~h~nI~-~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~a--L~~lH~~~i~H---  127 (301)
T cd07873          56 SLLKDLKHANIV-TLHDIIH-TEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRG--LNYCHRRKVLH---  127 (301)
T ss_pred             HHHHhcCCCCcc-eEEEEEe-cCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHhCCeeC---
Confidence            366778887766 4445544 45568889988753 443322                    22  24777776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|+
T Consensus       128 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~---~~~~~~~~Dv~slG~~l~el~tg~  202 (301)
T cd07873         128 RDLKPQNLLINERGELKLADFGLARAKSIPTKT-YSNEVVTLW-YRPPDILLG---STDYSTQIDMWGVGCIFYEMSTGR  202 (301)
T ss_pred             CCCCHHHEEECCCCcEEECcCcchhccCCCCCc-ccccceeec-ccCcHHHhC---CCCCccHHHHHHHHHHHHHHHhCC
Confidence            555599999999999999999998654332211 111345666 999998865   134678999999999999999999


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      +||.+
T Consensus       203 ~~f~~  207 (301)
T cd07873         203 PLFPG  207 (301)
T ss_pred             CCCCC
Confidence            99987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.86  E-value=1.5e-20  Score=138.61  Aligned_cols=171  Identities=17%  Similarity=0.172  Sum_probs=108.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------HHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------LRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++.. ..... +...+++++|+..++++.+.+..                      .+..|+|+.++   
T Consensus        47 ~~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---  121 (269)
T cd05087          47 QPYRSLQHSNLLQC-LGQCT-EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNF---  121 (269)
T ss_pred             HHHHhCCCCCEeeE-EEEEc-CCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCE---
Confidence            35677888887644 34333 34567899999888877664421                      01246666654   


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCC---CCCCccchHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNP---SNYDIRSDVWSLGISLI  136 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~---~~~~~~~Diwslg~~l~  136 (182)
                      .|+|+||+||+++.++.++|+|||.+......... ......++.. |+|||++......   ..++.++|+||+|+++|
T Consensus       122 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  200 (269)
T cd05087         122 IHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLR-WIAPELVDEVHGNLLVVDQTKESNVWSLGVTIW  200 (269)
T ss_pred             eccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCccc-ccCHhHhccccccccccCCCccchhHHHHHHHH
Confidence            55566699999999999999999998654332211 1112345556 9999998642110   13568999999999999


Q ss_pred             HHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCC----CCCCCHHHHHHhh
Q psy17162        137 ELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLP----PGEFSSDFKDFIT  180 (182)
Q Consensus       137 ~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~~~~i~  180 (182)
                      +|++ |..||... ...+.......+...+++    ....++.++++++
T Consensus       201 el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (269)
T cd05087         201 ELFELGSQPYRHL-SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQ  248 (269)
T ss_pred             HHHhCCCCCCCCC-ChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHH
Confidence            9996 99999873 333433333333222222    1245677777665

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.86  E-value=9.4e-21  Score=139.64  Aligned_cols=162  Identities=17%  Similarity=0.212  Sum_probs=112.5

Q ss_pred             HhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcchhcccccCC
Q psy17162          7 VFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~~~h~~~~~l   65 (182)
                      .++|+|++..+. ... +....++++|+..++++.+.+...                     ...+||+.  .+..|+|+
T Consensus        65 ~~~h~~i~~~~~-~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl  140 (269)
T cd08528          65 QLRHPNIVRYYK-TFL-ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDL  140 (269)
T ss_pred             cCCCCCeeeEEe-eEc-cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCC
Confidence            467777665443 333 456788999988776665433110                     12356641  23456667


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+........  .....++.. |++||.+.+    ..++.++|+||+|+++|++++|.+||
T Consensus       141 ~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~-~~~Pe~~~~----~~~~~~~Dv~slG~ll~~l~~g~~p~  213 (269)
T cd08528         141 TPNNIMLGEDDKVTITDFGLAKQKQPESK--LTSVVGTIL-YSCPEIVKN----EPYGEKADVWAFGCILYQMCTLQPPF  213 (269)
T ss_pred             CHHHEEECCCCcEEEecccceeecccccc--cccccCccc-CcChhhhcC----CCCchHHHHHHHHHHHHHHHhCCCcc
Confidence            79999999999999999999876544321  233456677 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .. .........+..+...+.+...+++++.++++
T Consensus       214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  247 (269)
T cd08528         214 YS-TNMLSLATKIVEAVYEPLPEGMYSEDVTDVIT  247 (269)
T ss_pred             cc-cCHHHHHHHHhhccCCcCCcccCCHHHHHHHH
Confidence            76 34444444444444444434467888888875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.86  E-value=1.6e-20  Score=139.08  Aligned_cols=164  Identities=23%  Similarity=0.322  Sum_probs=114.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++.. .+... ++...++++|+..++++.+.+..              +  ...++|+.++.|   +|++|
T Consensus        55 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h---~dl~p  129 (277)
T cd06641          55 VLSQCDSPYVTKY-YGSYL-KDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH---RDIKA  129 (277)
T ss_pred             HHHhcCCCCEeEE-EEEEE-eCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeec---CCCCH
Confidence            5666778776644 33333 45567899999888777665321              1  124677665554   55669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++++|||++......... .....++.. |+|||.+..    ..++.++|+||+||++|+|++|..||..
T Consensus       130 ~Ni~i~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p~~~  203 (277)
T cd06641         130 ANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPF-WMAPEVIKQ----SAYDSKADIWSLGITAIELAKGEPPHSE  203 (277)
T ss_pred             HhEEECCCCCEEEeecccceecccchhh-hccccCCcc-ccChhhhcc----CCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence            9999999999999999988665433221 122456667 999999877    6778899999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                       ..+......+..+..+.+ +..++.++.+++.
T Consensus       204 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  234 (277)
T cd06641         204 -LHPMKVLFLIPKNNPPTL-EGNYSKPLKEFVE  234 (277)
T ss_pred             -cchHHHHHHHhcCCCCCC-CcccCHHHHHHHH
Confidence             344444444444444444 4457788888775

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.86  E-value=4.1e-21  Score=143.56  Aligned_cols=165  Identities=18%  Similarity=0.267  Sum_probs=112.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------H--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------L--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.+.|+|++ .+.+... .....++++|+...+++.+++..              +  ...+||+.++.   |+|++|
T Consensus        69 ~l~~l~hp~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~---H~dL~p  143 (293)
T cd06647          69 VMRENKHPNIV-NYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVI---HRDIKS  143 (293)
T ss_pred             HHhhcCCCCee-ehhheee-eCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEe---eccCCH
Confidence            56667776665 3444433 34567889999888777654321              0  12477777655   555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+......... .....++.. |++||.+..    ..++.++|+||+|+++|++++|..||..
T Consensus       144 ~Nili~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~----~~~~~~~Dv~slG~ll~~ll~g~~pf~~  217 (293)
T cd06647         144 DNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPY-WMAPEVVTR----KAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (293)
T ss_pred             HHEEEcCCCCEEEccCcceecccccccc-cccccCChh-hcCchhhcc----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999987655433221 122456667 999999877    6778899999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                       ..+...+..+..+..+.++ +..++..++++++
T Consensus       218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  250 (293)
T cd06647         218 -ENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  250 (293)
T ss_pred             -CChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence             3443444333333334443 3456778888775

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.86  E-value=1.2e-20  Score=138.40  Aligned_cols=166  Identities=23%  Similarity=0.386  Sum_probs=116.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhh-cchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQD-YHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~-~~~~h~~~~~l   65 (182)
                      ++..++|++++ .+.+... .....++++++..++++.+.+..                 ....++|+ .+++|++   +
T Consensus        52 ~l~~l~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~---l  126 (264)
T cd06623          52 TLRSCESPYVV-KCYGAFY-KEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRD---I  126 (264)
T ss_pred             HHHhcCCCCee-eEEEEEc-cCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCC---C
Confidence            45667766654 4444444 34678899999887777765421                 12347777 6666555   5


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|++++|+.||
T Consensus       127 ~~~ni~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~-y~~pE~~~~----~~~~~~~Dv~slG~il~~l~tg~~p~  200 (264)
T cd06623         127 KPSNLLINSKGEVKIADFGISKVLENTLDQ-CNTFVGTVT-YMSPERIQG----ESYSYAADIWSLGLTLLECALGKFPF  200 (264)
T ss_pred             CHHHEEECCCCCEEEccCccceecccCCCc-ccceeeccc-ccCHhhhCC----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999988765443321 112345666 999999887    67788999999999999999999999


Q ss_pred             CCCC--CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWG--SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~--~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ....  ...+....+.....+.++...+|..+.++++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  237 (264)
T cd06623         201 LPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFIS  237 (264)
T ss_pred             ccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHH
Confidence            8743  3344445555555555533337888888876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.86  E-value=7e-21  Score=145.77  Aligned_cols=132  Identities=16%  Similarity=0.186  Sum_probs=95.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHHH-----------------HHHHHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQKE-----------------LETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~-----------------l~~~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++..+..+...    +....++++++... .+.+.                 +.++  .+||+.+++   
T Consensus        67 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL--~~LH~~gi~---  140 (353)
T cd07850          67 VLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGI--KHLHSAGII---  140 (353)
T ss_pred             HHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHH--HHHHhCCee---
Confidence            367778888876544333221    22356888888754 33332                 2233  477777655   


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+|+||+||+++.++.+||+|||.+........  .....++.. |+|||.+.+    ..++.++|+||+||++|+|++|
T Consensus       141 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~~l~~l~~g  213 (353)
T cd07850         141 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMIRG  213 (353)
T ss_pred             eCCCCHHHEEECCCCCEEEccCccceeCCCCCC--CCCCccccc-ccCHHHHhC----CCCCCchhhHhHHHHHHHHHHC
Confidence            555569999999999999999999976544322  222456667 999999987    7788999999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      +.||.+
T Consensus       214 ~~pf~~  219 (353)
T cd07850         214 TVLFPG  219 (353)
T ss_pred             CCCCCC
Confidence            999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.86  E-value=1.8e-20  Score=136.92  Aligned_cols=165  Identities=19%  Similarity=0.250  Sum_probs=113.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|++++ .+.+... +....++++++...+++.+.+...                   ...++|+.++   .|+|
T Consensus        54 ~l~~l~~~~i~-~~~~~~~-~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~---~h~d  128 (258)
T smart00219       54 IMRKLDHPNIV-KLLGVCT-EEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF---IHRD  128 (258)
T ss_pred             HHHhcCCCchh-eEEEEEc-CCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe---eecc
Confidence            55667776665 4444444 336788899988777766544211                   1236666655   4556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ++|+||+++.++.++|+|||.+...............++.. |++||.+..    ..++.++|+||+|+++|+|++ |.+
T Consensus       129 l~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~~Pe~~~~----~~~~~~~Di~slG~i~~~l~~~g~~  203 (258)
T smart00219      129 LAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIR-WMAPESLKD----GKFTSKSDVWSFGVLLWEIFTLGES  203 (258)
T ss_pred             cccceEEEccCCeEEEcccCCceecccccccccccCCCccc-ccChHHhcc----CCCCcchhHHHHHHHHHHHHhCCCC
Confidence            66999999999999999999987655432211111224445 999999876    678899999999999999998 889


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. .........+..+..+.. +...|+++.+++.
T Consensus       204 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  238 (258)
T smart00219      204 PYPG-MSNEEVLEYLKKGYRLPK-PENCPPEIYKLML  238 (258)
T ss_pred             CCCC-CCHHHHHHHHhcCCCCCC-CCcCCHHHHHHHH
Confidence            9987 345455555555655555 4557888888875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.86  E-value=3.3e-21  Score=141.60  Aligned_cols=164  Identities=31%  Similarity=0.513  Sum_probs=115.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhh-cchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQD-YHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~-~~~~h~~~~~   64 (182)
                      +++.+.|+|++. +.+... +...+++++++..+.++.+.+..                  ....++|+ .++   .|+|
T Consensus        52 ~l~~~~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i---~H~d  126 (265)
T cd06605          52 ILHKCNSPYIVG-FYGAFY-NNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI---IHRD  126 (265)
T ss_pred             HHHHCCCCchhh-hheeee-cCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe---ecCC
Confidence            556677776653 333433 34678889998887766654421                  11346666 554   4556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||.+........  .. ..++.. |+|||.+.+    ..++.++|+||+|+++|++++|..|
T Consensus       127 l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~-~~~~~~-y~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p  198 (265)
T cd06605         127 VKPSNILVNSRGQIKLCDFGVSGQLVNSLA--KT-FVGTSS-YMAPERIQG----NDYSVKSDIWSLGLSLIELATGRFP  198 (265)
T ss_pred             CCHHHEEECCCCCEEEeecccchhhHHHHh--hc-ccCChh-ccCHHHHcC----CCCCchhhHHHHHHHHHHHHhCCCC
Confidence            669999999999999999998866543322  22 456666 999999987    6788999999999999999999999


Q ss_pred             CCCC----CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTW----GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~----~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |...    ....+....+..+..+.++...++++++++|+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (265)
T cd06605         199 YPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVN  238 (265)
T ss_pred             CCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence            9763    12334444455555566644448888998876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.86  E-value=8.9e-21  Score=142.60  Aligned_cols=145  Identities=18%  Similarity=0.140  Sum_probs=99.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++.....+.......+++++++... ++.+.                    +.++  .+||+.+++|   
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l--~~lH~~~i~H---  131 (309)
T cd07845          58 TLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGL--QYLHENFIIH---  131 (309)
T ss_pred             HHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHH--HHHHhCCeec---
Confidence            36777888887654444333334567889988764 22221                    2222  4777776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|.
T Consensus       132 ~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~DvwslG~il~el~~g~  206 (309)
T cd07845         132 RDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP-MTPKVVTLW-YRAPELLLG---CTTYTTAIDMWAVGCILAELLAHK  206 (309)
T ss_pred             CCCCHHHEEECCCCCEEECccceeeecCCccCC-CCccccccc-ccChhhhcC---CCCcCchHHHHHHHHHHHHHHhCC
Confidence            556699999999999999999998765543211 111234556 999998864   135678999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHh
Q psy17162        143 FPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~  159 (182)
                      +||.+ ..+.+.+..+.
T Consensus       207 ~~f~~-~~~~~~~~~~~  222 (309)
T cd07845         207 PLLPG-KSEIEQLDLII  222 (309)
T ss_pred             CCCCC-CCHHHHHHHHH
Confidence            99987 45555555443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.86  E-value=1.3e-20  Score=137.86  Aligned_cols=163  Identities=18%  Similarity=0.320  Sum_probs=113.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.+... ++..+++++|+..+.++.+.+..                 ....++|+.+++|   +|++
T Consensus        55 ~l~~~~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~dl~  129 (258)
T cd06632          55 LLSKLQHPNIVQ-YLGTER-EEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVH---RDIK  129 (258)
T ss_pred             HHHhcCCCCchh-eeeeEe-cCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCCC
Confidence            566777877654 444443 45678889999887776554311                 1134777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCC-CCccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSN-YDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~-~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.+||+|||.+........  .....++.. |++||.+..    .. ++.++|+||+|+++|++++|+.||
T Consensus       130 ~~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~-y~~pe~~~~----~~~~~~~~D~~slG~~l~~l~~g~~pf  202 (258)
T cd06632         130 GANILVDTNGVVKLADFGMAKQVVEFSF--AKSFKGSPY-WMAPEVIAQ----QGGYGLAADIWSLGCTVLEMATGKPPW  202 (258)
T ss_pred             HHHEEECCCCCEEEccCccceecccccc--ccccCCCcc-eeCHHHhcC----CCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence            9999999999999999998876543321  122456677 999999876    44 788999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ... ........+.. ...+.+ +..+++.++++++
T Consensus       203 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  236 (258)
T cd06632         203 SQL-EGVAAVFKIGRSKELPPI-PDHLSDEAKDFIL  236 (258)
T ss_pred             ccC-cHHHHHHHHHhcccCCCc-CCCcCHHHHHHHH
Confidence            773 34444444443 334444 4567888888875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=5.3e-21  Score=142.20  Aligned_cols=168  Identities=27%  Similarity=0.390  Sum_probs=112.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH--------------------HHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL--------------------RCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------------~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++. +.+... ....+++++|+..++.+.+.+...                    ...|||+.  .++.|
T Consensus        51 ~~l~~~~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H  126 (286)
T cd06622          51 DILHKAVSPYIVD-FYGAFF-IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIH  126 (286)
T ss_pred             HHHHhcCCCcHHh-hhhhee-cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEee
Confidence            3567777777753 333333 456788899998877766543220                    12466642  13456


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC--CCCCCccchHHHHHHHHHHHHh
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN--PSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      +|+||+||+++.++.++|+|||.+........  .. ..++.. |+|||.+.....  ...++.++|+||+||++|+|++
T Consensus       127 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~-~~~~~~-y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~  202 (286)
T cd06622         127 RDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA--KT-NIGCQS-YMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMAL  202 (286)
T ss_pred             CCCCHHHEEECCCCCEEEeecCCcccccCCcc--cc-CCCccC-ccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHh
Confidence            66779999999999999999999876543322  22 456667 999998865211  1235788999999999999999


Q ss_pred             CCCCCCCCCCcHH---HHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        141 GRFPYDTWGSPFE---QLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       141 g~~pf~~~~~~~~---~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+.||... ....   .+..+..+.++.++ ..++++++++++
T Consensus       203 g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~  243 (286)
T cd06622         203 GRYPYPPE-TYANIFAQLSAIVDGDPPTLP-SGYSDDAQDFVA  243 (286)
T ss_pred             CCCCCCCc-chhhHHHHHHHHhhcCCCCCC-cccCHHHHHHHH
Confidence            99999762 2222   22334455556664 448889888875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.86  E-value=2.1e-21  Score=145.23  Aligned_cols=120  Identities=12%  Similarity=0.086  Sum_probs=83.9

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh------hhcccCCCCCCcccCccccCCCCCCCCCC
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI------IRGLYGADCDPNFIRPERIDPSGNPSNYD  123 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~  123 (182)
                      .|+|+.+++|   ||+||+||+++.++.++|+|||+|+.......      .......|+.. |+|||+..+    ..++
T Consensus       140 ~~lH~~~iiH---rDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~-y~ape~~~~----~~~~  211 (294)
T PHA02882        140 EYIHEHGISH---GDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLY-YAGLDAHNG----ACVT  211 (294)
T ss_pred             HHHHhCCeec---CCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCcc-ccCHHHhCC----CCCC
Confidence            3888776555   55569999999999999999999876532211      00122457778 999999887    7789


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCCcHHHH--------HHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        124 IRSDVWSLGISLIELATGRFPYDTWGSPFEQL--------KQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~--------~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .++|+||+||++|+|++|+.||.+........        ..+..+   .......++++.++++
T Consensus       212 ~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  273 (294)
T PHA02882        212 RRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEG---KIKIKNANKFIYDFIE  273 (294)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhh---hhccCCCCHHHHHHHH
Confidence            99999999999999999999998742322221        112111   1222345778888775

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=4.9e-21  Score=152.72  Aligned_cols=131  Identities=17%  Similarity=0.207  Sum_probs=90.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccc-----------------------hHHHHHHHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAE-----------------------KVQKELETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~l~~~l~~~~~~~l~~~~~~h~   60 (182)
                      +++.++|+|++. +.++... ....++++++....                       .+.+.+.++  .|||+.+++| 
T Consensus       216 il~~l~HpnIv~-l~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL--~yLH~~gIiH-  290 (501)
T PHA03210        216 ALGRLNHENILK-IEEILRS-EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAV--EYIHDKKLIH-  290 (501)
T ss_pred             HHHhCCCCCcCc-EeEEEEE-CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHH--HHHHhCCeec-
Confidence            567788888764 4444442 33455555543211                       111223333  4888876555 


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                        +||||+||+++.++.+||+|||++...............|+.. |+|||++.+    ..++.++||||+||++|+|++
T Consensus       291 --rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvil~ell~  363 (501)
T PHA03210        291 --RDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVA-TNSPEILAG----DGYCEITDIWSCGLILLDMLS  363 (501)
T ss_pred             --CCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcC-CCCchhhcC----CCCCcHHHHHHHHHHHHHHHH
Confidence              5555999999999999999999997765433211223568888 999999988    778999999999999999999


Q ss_pred             CCC-CCC
Q psy17162        141 GRF-PYD  146 (182)
Q Consensus       141 g~~-pf~  146 (182)
                      |.. |+.
T Consensus       364 ~~~~p~~  370 (501)
T PHA03210        364 HDFCPIG  370 (501)
T ss_pred             CCCCCcc
Confidence            764 443

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.86  E-value=1.5e-20  Score=139.93  Aligned_cols=165  Identities=19%  Similarity=0.215  Sum_probs=112.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------------------
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------------------   46 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------------------   46 (182)
                      +++.+.|+|++. +.++.. ++..+++++|+...+++.+.+..                                     
T Consensus        61 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  138 (288)
T cd05050          61 LMAEFDHPNIVK-LLGVCA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQ  138 (288)
T ss_pred             HHHhcCCCchhe-EEEEEc-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHH
Confidence            455677776654 444444 45567889998877666554421                                     


Q ss_pred             --HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCC
Q psy17162         47 --LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYD  123 (182)
Q Consensus        47 --~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~  123 (182)
                        ....++|..+++|   +|+||+||+++.++.++|+|||.+.......... ......+.. |+|||.+..    ..++
T Consensus       139 i~~aL~~lH~~~i~H---~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~  210 (288)
T cd05050         139 VAAGMAYLSERKFVH---RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIR-WMPPESIFY----NRYT  210 (288)
T ss_pred             HHHHHHHHHhCCeec---ccccHhheEecCCCceEECccccceecccCccccccCCCccChh-hcCHHHHhc----CCCC
Confidence              0124777776555   5555999999999999999999886543221100 111223445 999999887    6788


Q ss_pred             ccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        124 IRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .++|+||+||++|+|++ |..||.+ ....+....+..+..++. +...+.++.+++.
T Consensus       211 ~~~Dv~slG~il~el~~~~~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  266 (288)
T cd05050         211 TESDVWAYGVVLWEIFSYGMQPYYG-MAHEEVIYYVRDGNVLSC-PDNCPLELYNLMR  266 (288)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            99999999999999997 8889977 345555555555544444 4457888888875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG4278|consensus

Probab=99.86  E-value=2.4e-21  Score=151.93  Aligned_cols=167  Identities=16%  Similarity=0.244  Sum_probs=123.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +|++-++|+|.|..+.....  +..+|+++|++-.+.|.++|..                   .+..||...+++|+|+-
T Consensus       315 AvMKeikHpNLVqLLGVCT~--EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLA  392 (1157)
T KOG4278|consen  315 AVMKEIKHPNLVQLLGVCTH--EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLA  392 (1157)
T ss_pred             HHHHhhcCccHHHHhhhhcc--CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            46778899998755443333  4568888998888888887521                   13468988888887766


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                         ..|+|+.++..||++|||+++..+........ ..-.+..|+|||.+.-    ..++.++|+|+||+++||+.| |.
T Consensus       393 ---ARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA-GAKFPIKWTAPEsLAy----NtFSiKSDVWAFGVLLWEIATYGM  464 (1157)
T KOG4278|consen  393 ---ARNCLVGENHIVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAY----NTFSIKSDVWAFGVLLWEIATYGM  464 (1157)
T ss_pred             ---hhhccccccceEEeeccchhhhhcCCceeccc-CccCcccccCcccccc----cccccchhhHHHHHHHHHHHhcCC
Confidence               99999999999999999999886654332111 2233446999999987    689999999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHh-hCCCCCCCCCCCCHHHHHHh-hhC
Q psy17162        143 FPYDTWGSPFEQLKQVV-QDDPPRLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~~i-~~~  182 (182)
                      .||.+  .+..++...+ .|.+..- |+.+++....++ .||
T Consensus       465 sPYPG--idlSqVY~LLEkgyRM~~-PeGCPpkVYeLMraCW  503 (1157)
T KOG4278|consen  465 SPYPG--IDLSQVYGLLEKGYRMDG-PEGCPPKVYELMRACW  503 (1157)
T ss_pred             CCCCC--ccHHHHHHHHhccccccC-CCCCCHHHHHHHHHHh
Confidence            99999  3334444444 4555555 677888777665 455

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.86  E-value=2.1e-20  Score=137.87  Aligned_cols=166  Identities=20%  Similarity=0.236  Sum_probs=111.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++.. .+... ++..+++++|+...+++.+.+..                  ....++|+.+++|   +|
T Consensus        57 ~~l~~l~h~ni~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H---~d  131 (269)
T cd05065          57 SIMGQFDHPNIIHL-EGVVT-KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVH---RD  131 (269)
T ss_pred             HHHHhCCCcCcceE-EEEEC-CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee---cc
Confidence            35677888887654 44443 55667889998877776554311                  1124777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCC---CCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGAD---CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~---~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      +||+||+++.++.++|+|||.+......... ......+   +.. |+|||.+..    ..++.++|+||+||++|++++
T Consensus       132 l~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~DvwslG~~l~e~l~  206 (269)
T cd05065         132 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIR-WTAPEAIAY----RKFTSASDVWSYGIVMWEVMS  206 (269)
T ss_pred             cChheEEEcCCCcEEECCCccccccccCccccccccccCCCccee-ecCHhHhcc----CcccchhhhhhhHHHHHHHhc
Confidence            5599999999999999999988665432210 0110111   234 999999987    678899999999999999886


Q ss_pred             -CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        141 -GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       141 -g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                       |..||.. ....+....+......+. +..++..+.+++.
T Consensus       207 ~g~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~  245 (269)
T cd05065         207 YGERPYWD-MSNQDVINAIEQDYRLPP-PMDCPTALHQLML  245 (269)
T ss_pred             CCCCCCCC-CCHHHHHHHHHcCCcCCC-cccCCHHHHHHHH
Confidence             9999987 344455555544443333 3456777877764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.86  E-value=1.6e-20  Score=138.77  Aligned_cols=167  Identities=14%  Similarity=0.161  Sum_probs=112.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH--------------------------HHHHHhhcch
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL--------------------------RCIYIQDYHL   57 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------------------~~~~l~~~~~   57 (182)
                      +++.+.|+|++ .+.++.. +....++++|+...+++.+.+...                          ...|||+.++
T Consensus        61 ~l~~l~h~~iv-~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i  138 (275)
T cd05046          61 MFRKLSHKNVV-RLLGLCR-EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF  138 (275)
T ss_pred             HHHhcCCccee-eeEEEEC-CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc
Confidence            67778777665 5555554 445678899998877777654210                          1246776654


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                         .|+|+||+||+++.++.++++|||++...............++.. |++||.+..    ...+.++|+||+|+++|+
T Consensus       139 ---~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~~l~~  210 (275)
T cd05046         139 ---VHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLR-WLAPEAVQE----DDFSTKSDVWSFGVLMWE  210 (275)
T ss_pred             ---ccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEe-ecChhhhcc----CCCCchhhHHHHHHHHHH
Confidence               555566999999999999999999886543221111111334455 999999877    567789999999999999


Q ss_pred             HHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        138 LAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       138 l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +++ |..||.+ .........+..+......+..++..+++++.+
T Consensus       211 l~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  254 (275)
T cd05046         211 VFTQGELPFYG-LSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTR  254 (275)
T ss_pred             HHhCCCCCccc-cchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHH
Confidence            998 8899976 344444444443432222244678888887753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.86  E-value=1.6e-20  Score=141.26  Aligned_cols=163  Identities=20%  Similarity=0.248  Sum_probs=111.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH----------------HHH--HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL----------------ETL--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----------------~~~--~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++... +... +....++++++..+ .+.+.+                ..+  ...++|+.+++   |+|+
T Consensus        68 ~l~~l~h~~i~~~~-~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~---H~dl  141 (308)
T cd06634          68 FLQKLRHPNTIQYR-GCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI---HRDV  141 (308)
T ss_pred             HHHhCCCCCcccEE-EEEE-cCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc---cCCC
Confidence            56777787766443 3333 34567788888653 333221                111  13477776654   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+.......     ...++.. |+|||.+.... ...++.++|+||+||++|++++|..||
T Consensus       142 ~p~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~-y~aPE~~~~~~-~~~~~~~~Di~slG~il~el~~g~~p~  214 (308)
T cd06634         142 KAGNILLSEPGLVKLGDFGSASIMAPAN-----XFVGTPY-WMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKPPL  214 (308)
T ss_pred             CHHhEEECCCCcEEECCcccceeecCcc-----cccCCcc-ccCHHHHhhcc-cCCCCcccchHHHHHHHHHHHcCCCCC
Confidence            6999999999999999999886644322     2456667 99999875311 135678999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .+. ...+....+..+..+..++..++..++++|+
T Consensus       215 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  248 (308)
T cd06634         215 FNM-NAMSALYHIAQNESPALQSGHWSEYFRNFVD  248 (308)
T ss_pred             ccc-cHHHHHHHHhhcCCCCcCcccccHHHHHHHH
Confidence            873 4445555666665555555578888888876

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.86  E-value=1.7e-20  Score=139.28  Aligned_cols=131  Identities=15%  Similarity=0.184  Sum_probs=92.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH----------------------HHHHHHHHHhhcchhccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE----------------------LETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------l~~~~~~~l~~~~~~h~~   61 (182)
                      +++.++|+|++. +.+... ++..+++++++... .+.+.                      +.++  .|||+.+++|  
T Consensus        52 ~l~~l~h~~i~~-~~~~~~-~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L--~~lH~~~i~H--  124 (285)
T cd07861          52 LLKELQHPNIVC-LQDVLM-QESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGI--LFCHSRRVLH--  124 (285)
T ss_pred             HHHhcCCCCEee-eEEEEe-eCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHH--HHHHhCCeee--
Confidence            567788777654 444444 45667888888653 33221                      2233  4888776655  


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                       +|++|+||+++.++.++|+|||++......... .....++.. |+|||.+..   ...++.++|+||+||++|+|++|
T Consensus       125 -~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~il~~l~tg  198 (285)
T cd07861         125 -RDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV-YTHEVVTLW-YRAPEVLLG---SPRYSTPVDIWSIGTIFAEMATK  198 (285)
T ss_pred             -cCCCHHHEEEcCCCcEEECcccceeecCCCccc-ccCCccccc-ccChHHhcC---CCCcCcHHHHHHHHHHHHHHHHC
Confidence             555599999999999999999998654332211 122345666 999998865   13467889999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      .+||.+
T Consensus       199 ~~~~~~  204 (285)
T cd07861         199 KPLFHG  204 (285)
T ss_pred             CCCCCC
Confidence            999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.86  E-value=1.8e-20  Score=140.67  Aligned_cols=163  Identities=18%  Similarity=0.186  Sum_probs=104.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------H--HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------L--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~--~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++..+. ....  ...++++++...+++.+.+..                +  ...|+|+.+++   |+|+
T Consensus        62 ~~~~l~h~niv~~~~-~~~~--~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv---H~di  135 (303)
T cd05110          62 IMASMDHPHLVRLLG-VCLS--PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV---HRDL  135 (303)
T ss_pred             HHHhCCCCCcccEEE-EEcC--CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCee---cccc
Confidence            556677877765443 3332  234567777766655543211                0  12477776655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ||+||+++.++.+||+|||.++......... .....++.. |++||.+..    ..++.++|+||+|+++|++++ |..
T Consensus       136 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~----~~~~~~~DiwslG~~l~el~t~g~~  210 (303)
T cd05110         136 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK-WMALECIHY----RKFTHQSDVWSYGVTIWELMTFGGK  210 (303)
T ss_pred             ccceeeecCCCceEEccccccccccCcccccccCCCccccc-cCCHHHhcc----CCCChHHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999997654322211 111223445 999999887    678899999999999999997 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI  179 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i  179 (182)
                      ||.+. ...+....+..+..++. +...+..+++++
T Consensus       211 p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li  244 (303)
T cd05110         211 PYDGI-PTREIPDLLEKGERLPQ-PPICTIDVYMVM  244 (303)
T ss_pred             CCCCC-CHHHHHHHHHCCCCCCC-CCCCCHHHHHHH
Confidence            99872 33233333333333333 334566666654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.86  E-value=1.3e-20  Score=140.98  Aligned_cols=164  Identities=34%  Similarity=0.562  Sum_probs=107.1

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccc--hHH-----------------HHHHHHHHHHHhh-cchhcccccCCCC
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAE--KVQ-----------------KELETLRCIYIQD-YHLCVRSTRYFSV   67 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~-----------------~~l~~~~~~~l~~-~~~~h~~~~~lk~   67 (182)
                      .+|+|++ .+.+... +...+++++++....  .+.                 +.+.++  .|+|+ .++   .|+|++|
T Consensus        71 ~~~~~i~-~~~~~~~-~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l--~~lH~~~~i---~H~dl~p  143 (296)
T cd06618          71 HDCPYIV-KCYGYFI-TDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKAL--HYLKEKHGV---IHRDVKP  143 (296)
T ss_pred             cCCCchH-hhheeee-cCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHhhCCE---ecCCCcH
Confidence            3455554 4444444 456678888876531  111                 112233  47886 354   4555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+........  .....++.. |+|||.+........++.++|+||+|+++|+|++|+.||..
T Consensus       144 ~nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  220 (296)
T cd06618         144 SNILLDASGNVKLCDFGISGRLVDSKA--KTRSAGCAA-YMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN  220 (296)
T ss_pred             HHEEEcCCCCEEECccccchhccCCCc--ccCCCCCcc-ccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence            999999999999999999866543322  122345566 99999987522113477899999999999999999999976


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCC-CCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~-~~s~~~~~~i~~  181 (182)
                      .....+.+..+.....+.++.. .++.++++++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  255 (296)
T cd06618         221 CKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDL  255 (296)
T ss_pred             chhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHH
Confidence            3344455555555554445332 478888888764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.86  E-value=1.8e-20  Score=140.10  Aligned_cols=166  Identities=19%  Similarity=0.258  Sum_probs=112.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH--------------HH--HHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE--------------TL--RCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------------~~--~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++.....+.  +....++++|+....++.+.+.              .+  ...++|..+++   |+|++|
T Consensus        70 ~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~giv---H~dl~p  144 (292)
T cd06657          70 IMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVI---HRDIKS  144 (292)
T ss_pred             HHHhcCCcchhheeeEEE--eCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee---cCCCCH
Confidence            566778877765544333  3556788999887776655321              01  12477777655   555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.++|+|||.+......... .....++.. |++||.+..    ..++.++|+||+|+++|+|++|..||.+
T Consensus       145 ~Nilv~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~~pE~~~~----~~~~~~~Dv~slGvil~el~tg~~p~~~  218 (292)
T cd06657         145 DSILLTHDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPY-WMAPELISR----LPYGPEVDIWSLGIMVIEMVDGEPPYFN  218 (292)
T ss_pred             HHEEECCCCCEEEcccccceeccccccc-ccccccCcc-ccCHHHhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999987654332211 112456667 999998876    6778899999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                       .........+..+.++.++ ...+++.+.+++.+
T Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (292)
T cd06657         219 -EPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDR  252 (292)
T ss_pred             -CCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHH
Confidence             3444444444334433332 23567888887754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.86  E-value=2.2e-20  Score=138.82  Aligned_cols=135  Identities=16%  Similarity=0.100  Sum_probs=95.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++.........+...+++++|+..++++.+.+..                  ....|+|+.+++|   +|
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H---~d  134 (284)
T cd05079          58 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVH---RD  134 (284)
T ss_pred             HHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee---cc
Confidence            36778888777654333333334667899999988887664311                  0134777766555   45


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.++|+|||.+.........  ......++.. |+|||.+.+    ..++.++|+||+|+++|+++++.
T Consensus       135 lkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~apE~~~~----~~~~~~~Di~slG~il~ellt~~  209 (284)
T cd05079         135 LAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF-WYAPECLIQ----SKFYIASDVWSFGVTLYELLTYC  209 (284)
T ss_pred             cchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCcc-ccCHHHhcc----CCCCccccchhhhhhhhhhhcCC
Confidence            5599999999999999999998765432210  0111344556 999999887    67889999999999999999977


Q ss_pred             CCC
Q psy17162        143 FPY  145 (182)
Q Consensus       143 ~pf  145 (182)
                      .|.
T Consensus       210 ~~~  212 (284)
T cd05079         210 DSE  212 (284)
T ss_pred             CCC
Confidence            654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.85  E-value=3.6e-20  Score=138.25  Aligned_cols=143  Identities=17%  Similarity=0.170  Sum_probs=99.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      ++++.++|+|++.....+...+...+++++++... ++.+.+                    .+  ..|||+.+++|   
T Consensus        56 ~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~a--L~~LH~~~i~H---  129 (293)
T cd07843          56 NILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSG--VAHLHDNWILH---  129 (293)
T ss_pred             HHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHH--HHHHHHCCeee---
Confidence            36778888887654444444334778899998764 443322                    22  34888776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|.
T Consensus       130 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g~  204 (293)
T cd07843         130 RDLKTSNLLLNNRGILKICDFGLAREYGSPLKP-YTQLVVTLW-YRAPELLLG---AKEYSTAIDMWSVGCIFAELLTKK  204 (293)
T ss_pred             ccCCHHHEEECCCCcEEEeecCceeeccCCccc-ccccccccc-ccCchhhcC---CccccchhhHHHHHHHHHHHHhCC
Confidence            555599999999999999999998766543221 122345666 999998875   134578999999999999999999


Q ss_pred             CCCCCCCCcHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQ  157 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~  157 (182)
                      +||.+ ....+...+
T Consensus       205 ~~f~~-~~~~~~~~~  218 (293)
T cd07843         205 PLFPG-KSEIDQLNK  218 (293)
T ss_pred             CCCCC-CChHHHHHH
Confidence            99987 344444433

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.85  E-value=3.3e-20  Score=137.70  Aligned_cols=140  Identities=16%  Similarity=0.109  Sum_probs=98.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+.|+|++. +.+... +...+++++|+.....+....                   .+  ..|||+.++.|   +|
T Consensus        53 ~l~~~~h~~i~~-~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~--l~~LH~~~i~H---~d  125 (286)
T cd07847          53 MLKQLKHPNLVN-LIEVFR-RKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQA--VNFCHKHNCIH---RD  125 (286)
T ss_pred             HHHhCCCCCEee-eeeEEe-eCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHH--HHHHHHCCcee---cC
Confidence            667788877654 444444 355678899987766554421                   22  34788776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|.+|
T Consensus       126 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~---~~~~~~~~Di~slG~i~~~l~~g~~p  200 (286)
T cd07847         126 VKPENILITKQGQIKLCDFGFARILTGPGDD-YTDYVATRW-YRAPELLVG---DTQYGPPVDVWAIGCVFAELLTGQPL  200 (286)
T ss_pred             CChhhEEEcCCCcEEECccccceecCCCccc-ccCcccccc-cCCHHHHhC---CCCcCchhhhHHHHHHHHHHHhCCCC
Confidence            5599999999999999999998765443211 112445666 999998865   13467899999999999999999999


Q ss_pred             CCCCCCcHHHHH
Q psy17162        145 YDTWGSPFEQLK  156 (182)
Q Consensus       145 f~~~~~~~~~~~  156 (182)
                      |.+ ....+...
T Consensus       201 ~~~-~~~~~~~~  211 (286)
T cd07847         201 WPG-KSDVDQLY  211 (286)
T ss_pred             CCC-CChHHHHH
Confidence            987 34434433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.85  E-value=3.1e-20  Score=135.57  Aligned_cols=165  Identities=19%  Similarity=0.328  Sum_probs=116.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~~~h~~~   62 (182)
                      +++.++++|++.....+..  ...+++++++....++.+.+...                     ...++|..+++|   
T Consensus        52 ~l~~l~~~~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H---  126 (258)
T cd08215          52 ILKKLNHPNIIKYYESFEE--KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILH---  126 (258)
T ss_pred             HHHhcCCCChhheEEEEec--CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEec---
Confidence            5667787776644433332  36677888888777765544221                     124777775555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++|+|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++++|++|.
T Consensus       127 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-y~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~g~  200 (258)
T cd08215         127 RDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL-AKTVVGTPY-YLSPELCQN----KPYNYKSDIWSLGCVLYELCTLK  200 (258)
T ss_pred             ccCChHHeEEcCCCcEEECCccceeecccCcce-ecceeeeec-ccChhHhcc----CCCCccccHHHHHHHHHHHHcCC
Confidence            555599999999999999999998765443321 122456677 999999877    67788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.. ...............+.+ +..++..+++++++
T Consensus       201 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~  237 (258)
T cd08215         201 HPFEG-ENLLELALKILKGQYPPI-PSQYSSELRNLVSS  237 (258)
T ss_pred             CCCCC-CcHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Confidence            99987 344455555555555555 44678888887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0200|consensus

Probab=99.85  E-value=1.1e-20  Score=153.44  Aligned_cols=171  Identities=19%  Similarity=0.262  Sum_probs=123.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHHH---------------------------------H
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETLR---------------------------------C   49 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---------------------------------~   49 (182)
                      ++++..+++.+++.+...... ...++.+.||...+++..++...+                                 .
T Consensus       353 ~~m~~~g~H~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GM  431 (609)
T KOG0200|consen  353 NVLKELGKHPNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGM  431 (609)
T ss_pred             HHHHHhcCCcchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHH
Confidence            356666655555555554443 788899999999998888765443                                 2


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCC-CCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGAD-CDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~-~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      +||.+.+   ..|||+..+||++..+..+|++|||+|+..............+ -+.+|||||.+..    ..|+.++|+
T Consensus       432 e~L~~~~---~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~----~~ft~kSDV  504 (609)
T KOG0200|consen  432 EYLASVP---CVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD----RVFTSKSDV  504 (609)
T ss_pred             HHHhhCC---ccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc----Ccccccchh
Confidence            4555554   5566666999999999999999999998654433311111111 3446999999998    789999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh-hC
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT-LW  182 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~-~~  182 (182)
                      ||+|+++||+++ |..|+.+.....+....+..|.+... |..+++++.++++ ||
T Consensus       505 WSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~-P~~c~~eiY~iM~~CW  559 (609)
T KOG0200|consen  505 WSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQ-PEHCSDEIYDLMKSCW  559 (609)
T ss_pred             hHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHh
Confidence            999999999998 99999985435566666777877766 5667888877654 44

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.85  E-value=3.5e-20  Score=136.19  Aligned_cols=166  Identities=22%  Similarity=0.307  Sum_probs=114.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH--------------------HHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL--------------------RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------------~~~~l~~~~~~h~~~~   63 (182)
                      +++.+.|+|++..... .. +....++++++..++++.+.+...                    ...+||+.++.|   +
T Consensus        52 ~l~~l~~~~i~~~~~~-~~-~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h---~  126 (267)
T cd06610          52 AMSQCNHPNVVKYYTS-FV-VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIH---R  126 (267)
T ss_pred             HHHhcCCCCEEEEEEE-Ee-eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeec---C
Confidence            4566778776654433 33 456678899988777665543210                    134777766555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCC-CCCccchHHHHHHHHHHHH
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPS-NYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~-~~~~~~Diwslg~~l~~l~  139 (182)
                      +++|+||+++.++.++|+|||++.........   ......++.. |++||.+..    . .++.++|+||+|+++|+|+
T Consensus       127 ~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~-y~~Pe~~~~----~~~~~~~~Dv~slG~i~~~l~  201 (267)
T cd06610         127 DIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC-WMAPEVMEQ----VHGYDFKADIWSFGITAIELA  201 (267)
T ss_pred             CCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChh-hcChHHHcc----ccCcCcccchHhHhHHHHHHH
Confidence            56699999999999999999988665443221   0122356667 999999876    3 6778999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCCCC----CCCCHHHHHHhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPP----GEFSSDFKDFIT  180 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~----~~~s~~~~~~i~  180 (182)
                      +|+.||... ........+....++.++.    ..++++++++++
T Consensus       202 ~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  245 (267)
T cd06610         202 TGAAPYSKY-PPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMIS  245 (267)
T ss_pred             hCCCCcccc-ChhhhHHHHhcCCCCCcCCccccccccHHHHHHHH
Confidence            999999873 4444455555554444432    256788888876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.85  E-value=9.6e-21  Score=138.78  Aligned_cols=165  Identities=18%  Similarity=0.207  Sum_probs=113.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. ..... +...+++++++..++++.+.+...                 ...+||..+++|   +|++
T Consensus        53 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h---~dl~  127 (258)
T cd05578          53 ILQELNHPFLVNL-WYSFQ-DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIH---RDIK  127 (258)
T ss_pred             HHHhCCCCChHHH-HHhhc-CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeec---cCCC
Confidence            5667788777532 22222 456688999988887766543211                 134788776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||.+........  .....++.. |+|||.+..    ..++.++|+||+|+++|++++|..||.
T Consensus       128 ~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~-y~~PE~~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~  200 (258)
T cd05578         128 PDNILLDEQGHVHITDFNIATKVTPDTL--TTSTSGTPG-YMAPEVLCR----QGYSVAVDWWSLGVTAYECLRGKRPYR  200 (258)
T ss_pred             HHHeEEcCCCCEEEeecccccccCCCcc--ccccCCChh-hcCHHHHcc----cCCCCcccchhhHHHHHHHHhCCCCCC
Confidence            9999999999999999998876544322  122456666 999999887    567899999999999999999999998


Q ss_pred             CCCC-cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGS-PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .... .............+.+ +..+++.+.+++++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~  235 (258)
T cd05578         201 GHSRTIRDQIRAKQETADVLY-PATWSTEAIDAINK  235 (258)
T ss_pred             CCCccHHHHHHHHhccccccC-cccCcHHHHHHHHH
Confidence            7322 1233333333233444 45678888888763

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=5.6e-20  Score=135.73  Aligned_cols=121  Identities=17%  Similarity=0.273  Sum_probs=85.0

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      +|+|+.+++|   +|+||+||+++.++.+|++|||.+......... ......++.. |++||.+..    ..++.++|+
T Consensus       127 ~~lH~~~i~H---~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-~~~pe~~~~----~~~~~~sDi  198 (273)
T cd05074         127 EYLSSKNFIH---RDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVK-WLALESLAD----NVYTTHSDV  198 (273)
T ss_pred             HHHHhCCEee---cccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchh-hcCHhHHhc----Cccchhhhh
Confidence            4888776555   555599999999999999999998765432210 0111223345 899999877    677889999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |++||.+ ....+....+..+..... +...++.+.+++.
T Consensus       199 ~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  249 (273)
T cd05074         199 WAFGVTMWEIMTRGQTPYAG-VENSEIYNYLIKGNRLKQ-PPDCLEDVYELMC  249 (273)
T ss_pred             HHHHHHHHHHhhCCCCCCCC-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHH
Confidence            999999999999 8999987 344444444545444433 3346777877764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=7.7e-20  Score=133.34  Aligned_cols=164  Identities=23%  Similarity=0.351  Sum_probs=114.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|++++. +.+... +....++++++....++.+.+..               +  ...++|+.++   .|+|++
T Consensus        52 ~l~~l~~~~i~~-~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~  126 (254)
T cd06627          52 LLKNLKHPNIVK-YIGSIE-TSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV---IHRDIK  126 (254)
T ss_pred             HHHhCCCCCccE-EEEEEE-eCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCC
Confidence            456677777654 444443 34677889998877777654311               0  1236776655   456666


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||.+......... .....++.. |++||....    ...+.++|+||+|+++|++++|..||.
T Consensus       127 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-y~~pe~~~~----~~~~~~~Dv~~lG~~l~~l~~g~~p~~  200 (254)
T cd06627         127 AANILTTKDGVVKLADFGVATKLNDVSKD-DASVVGTPY-WMAPEVIEM----SGASTASDIWSLGCTVIELLTGNPPYY  200 (254)
T ss_pred             HHHEEECCCCCEEEeccccceecCCCccc-ccccccchh-hcCHhhhcC----CCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999998766543321 111456666 999999876    567889999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      . ...............+.+ +..+++.+++++.
T Consensus       201 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  232 (254)
T cd06627         201 D-LNPMAALFRIVQDDHPPL-PEGISPELKDFLM  232 (254)
T ss_pred             C-ccHHHHHHHHhccCCCCC-CCCCCHHHHHHHH
Confidence            7 344455555544544555 4567888888875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.85  E-value=4.8e-20  Score=134.97  Aligned_cols=132  Identities=17%  Similarity=0.197  Sum_probs=94.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------H--HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------L--RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~--~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++..+.....   ...++++++...+++.+++..                +  ...|||+.+++|   +|
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H---~d  126 (259)
T cd05037          53 SLMSQLSHKHLVKLYGVCVR---DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVH---GN  126 (259)
T ss_pred             HHHHcCCCcchhheeeEEec---CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeec---cc
Confidence            36777888777654443333   456789999888887665321                0  124777766554   55


Q ss_pred             CCCCcEEEcCCC-------eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQF-------LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        65 lk~~nil~~~~~-------~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      +||+||+++.++       .++|+|||++........     ..+... |+|||.+....  ..++.++|+||+|+++|+
T Consensus       127 lkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~-y~aPE~~~~~~--~~~~~~~Di~slG~~~~~  198 (259)
T cd05037         127 VCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREE-----RVERIP-WIAPECIRNGQ--ASLTIAADKWSFGTTLLE  198 (259)
T ss_pred             CccceEEEecCccccCCceeEEeCCCCcccccccccc-----cccCCC-ccChhhhcCCC--CCcchhhHHHHHHHHHHH
Confidence            559999999887       799999999876544211     345566 99999987611  267789999999999999


Q ss_pred             HHh-CCCCCCCC
Q psy17162        138 LAT-GRFPYDTW  148 (182)
Q Consensus       138 l~~-g~~pf~~~  148 (182)
                      +++ |..||...
T Consensus       199 l~~~~~~p~~~~  210 (259)
T cd05037         199 ICSNGEEPLSTL  210 (259)
T ss_pred             HHhCCCCCcccC
Confidence            999 68888763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.85  E-value=5e-20  Score=135.77  Aligned_cols=168  Identities=19%  Similarity=0.305  Sum_probs=111.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++. +.+... +...+++++++..++++.+.+..                    ....|||+.+++   |
T Consensus        57 ~~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~---h  131 (268)
T cd06624          57 ALHSYLKHRNIVQ-YLGSDS-ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIV---H  131 (268)
T ss_pred             HHHHhcCCCCeee-eeeeec-cCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEe---e
Confidence            3567788887764 444443 44667899998877777664321                    012467766554   5


Q ss_pred             cCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         63 RYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        63 ~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +|+||+||+++. ++.++|+|||.+......... .....++.. |+|||.+....  ..++.++|+||+|+++|+|++|
T Consensus       132 ~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~~~--~~~~~~~Dv~slGvvl~~l~~g  207 (268)
T cd06624         132 RDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC-TETFTGTLQ-YMAPEVIDKGP--RGYGAPADIWSLGCTIVEMATG  207 (268)
T ss_pred             cCCCHHHEEEcCCCCeEEEecchhheecccCCCc-cccCCCCcc-ccChhhhcccc--ccCCchhhhHHHHHHHHHHHhC
Confidence            566699999976 578999999988655332211 111345666 99999986511  2467899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..||............+ .....+.+ +..++++++++++
T Consensus       208 ~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  246 (268)
T cd06624         208 KPPFIELGEPQAAMFKVGMFKIHPEI-PESLSAEAKNFIL  246 (268)
T ss_pred             CCCCccccChhhhHhhhhhhccCCCC-CcccCHHHHHHHH
Confidence            99997633332333222 22334455 4567888888875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.85  E-value=7.1e-20  Score=136.86  Aligned_cols=166  Identities=16%  Similarity=0.133  Sum_probs=108.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------------------HHHHHHh
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------------------LRCIYIQ   53 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------------------~~~~~l~   53 (182)
                      ++++.++|+|++.. .+... ....+++++|+..++++.+.+..                             ....|||
T Consensus        69 ~~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  146 (295)
T cd05097          69 KIMSRLKNPNIIRL-LGVCV-SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA  146 (295)
T ss_pred             HHHHhCCCCCcCeE-EEEEc-CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence            36777888876644 44443 45667899999887766543311                             0124788


Q ss_pred             hcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         54 DYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        54 ~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      +.+++|   +|+||+||+++.++.+||+|||.+.......... .....++.. |+|||.+..    ..++.++|+||||
T Consensus       147 ~~~i~H---~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DvwSlG  218 (295)
T cd05097         147 SLNFVH---RDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIR-WMAWESILL----GKFTTASDVWAFG  218 (295)
T ss_pred             hcCeec---cccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCcee-ecChhhhcc----CCcCchhhHHHHH
Confidence            776655   4555999999999999999999986543322110 111233445 999999887    6788999999999


Q ss_pred             HHHHHHHh--CCCCCCCCCCcHHHHHHHhh-----C--CCCCCCCCCCCHHHHHHhh
Q psy17162        133 ISLIELAT--GRFPYDTWGSPFEQLKQVVQ-----D--DPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       133 ~~l~~l~~--g~~pf~~~~~~~~~~~~i~~-----~--~~~~~~~~~~s~~~~~~i~  180 (182)
                      +++|+|++  +..||.. ....+.+..+..     +  ..... +...++.+++++.
T Consensus       219 ~~l~el~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  273 (295)
T cd05097         219 VTLWEMFTLCKEQPYSL-LSDEQVIENTGEFFRNQGRQIYLSQ-TPLCPSPVFKLMM  273 (295)
T ss_pred             HHHHHHHHcCCCCCCcc-cChHHHHHHHHHhhhhccccccCCC-CCCCCHHHHHHHH
Confidence            99999988  6788876 233333332211     1  11111 3346778888775

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.85  E-value=5.5e-20  Score=137.31  Aligned_cols=167  Identities=16%  Similarity=0.214  Sum_probs=109.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------------HHHHHHhhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------------LRCIYIQDY   55 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------------~~~~~l~~~   55 (182)
                      +++.+.|+|++. +..... ++..+++++++...+++.+.+..                            ....|||+.
T Consensus        72 ~l~~l~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~  149 (296)
T cd05051          72 ILSRLSDPNIAR-LLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL  149 (296)
T ss_pred             HHHhcCCCCEeE-EEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            567788877664 444444 34567888888776665543211                            113478877


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +++|   +|+||+||+++.++.++|+|||.+......... ......++.. |+|||.+..    ..++.++|+||+||+
T Consensus       150 ~i~H---~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~~  221 (296)
T cd05051         150 NFVH---RDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIR-WMAWESVLL----GKFTTKSDVWAFGVT  221 (296)
T ss_pred             Cccc---cccchhceeecCCCceEEccccceeecccCcceeecCcCCCCce-ecCHHHhhc----CCCCccchhhhhHHH
Confidence            6655   455599999999999999999998754332210 0111334455 999999887    678899999999999


Q ss_pred             HHHHHh--CCCCCCCCCCcHHHHHHHhhC-----CCCCCC-CCCCCHHHHHHhhh
Q psy17162        135 LIELAT--GRFPYDTWGSPFEQLKQVVQD-----DPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       135 l~~l~~--g~~pf~~~~~~~~~~~~i~~~-----~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      +|++++  +..||... ...+.+......     ....++ +...|+++.+++.+
T Consensus       222 l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  275 (296)
T cd05051         222 LWEILTLCREQPYEHL-TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLE  275 (296)
T ss_pred             HHHHHhcCCCCCCCCc-ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHH
Confidence            999998  77888763 343444433321     111111 33567888887753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.85  E-value=7.8e-20  Score=136.71  Aligned_cols=166  Identities=17%  Similarity=0.204  Sum_probs=106.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------------HHHHHHhhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------------LRCIYIQDY   55 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------------~~~~~l~~~   55 (182)
                      +++.++|+|++. +.+... +...+++++|+...+++.+.+..                            .+..++|+.
T Consensus        72 ~l~~l~~~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~  149 (296)
T cd05095          72 IMSRLKDPNIIR-LLAVCI-TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL  149 (296)
T ss_pred             HHHhCCCCCcce-EEEEEe-cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            567788877764 444443 34557889998877776554321                            113477777


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +++|   +|+||+||+++.++.++|+|||.+.......... ......+.. |++||....    ..++.++|+||+||+
T Consensus       150 ~i~H---~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~-~~~pe~~~~----~~~~~~~DiwSlG~~  221 (296)
T cd05095         150 NFVH---RDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIR-WMSWESILL----GKFTTASDVWAFGVT  221 (296)
T ss_pred             Ceec---ccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccc-cCCHHHHhc----CCccchhhhhHHHHH
Confidence            6555   5555999999999999999999987643322100 111223345 999998877    678899999999999


Q ss_pred             HHHHHh--CCCCCCCCCCcHHHHHHHhh-----CCCCCCC-CCCCCHHHHHHhh
Q psy17162        135 LIELAT--GRFPYDTWGSPFEQLKQVVQ-----DDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       135 l~~l~~--g~~pf~~~~~~~~~~~~i~~-----~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      +|+|++  |..||... ...+.......     +....++ +..+++.+++++.
T Consensus       222 l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  274 (296)
T cd05095         222 LWEILTLCKEQPYSQL-SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLML  274 (296)
T ss_pred             HHHHHHhCCCCCcccc-ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHH
Confidence            999998  78899762 33333222111     1111111 3456777777764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.84  E-value=9.2e-20  Score=134.17  Aligned_cols=128  Identities=18%  Similarity=0.241  Sum_probs=89.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++. +.+... +....++++++...+.+...+                    .+  ..|||+.+++|   +
T Consensus        57 ~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~--l~~lH~~~ivH---~  129 (262)
T cd05077          57 MMRQVSHKHIVL-LYGVCV-RDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASA--LSYLEDKDLVH---G  129 (262)
T ss_pred             HHHhCCCCCEee-EEEEEe-cCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHhhhCCeEC---C
Confidence            566778877654 444444 344567888887766554332                    22  24777776555   5


Q ss_pred             CCCCCcEEEcCCCe-------EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         64 YFSVDTFHQRLQFL-------LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        64 ~lk~~nil~~~~~~-------~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      |+||+||+++.++.       ++++|||.+........     ..++.. |+|||.+..   ...++.++|+||+||++|
T Consensus       130 dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~~l~  200 (262)
T cd05077         130 NVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQE-----CVERIP-WIAPECVED---SKNLSIAADKWSFGTTLW  200 (262)
T ss_pred             CCCcccEEEecCCccCCCCceeEeCCCCCCccccCccc-----cccccc-ccChhhhcC---CCCCCchhHHHHHHHHHH
Confidence            55699999986653       89999998865533221     446667 999998863   146778999999999999


Q ss_pred             HHH-hCCCCCCC
Q psy17162        137 ELA-TGRFPYDT  147 (182)
Q Consensus       137 ~l~-~g~~pf~~  147 (182)
                      +|+ +|..||.+
T Consensus       201 el~~~~~~p~~~  212 (262)
T cd05077         201 EICYNGEIPLKD  212 (262)
T ss_pred             HHHhCCCCCCCC
Confidence            997 58899876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.84  E-value=4.1e-20  Score=135.16  Aligned_cols=164  Identities=18%  Similarity=0.287  Sum_probs=113.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.. .+... +...+++++|+...+++.+.+..                   ....|+|..+++|   +|
T Consensus        52 ~l~~~~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H---~d  126 (257)
T cd08225          52 LLAKMKHPNIVTF-FASFQ-ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILH---RD  126 (257)
T ss_pred             HHHhCCCCChhhh-hheec-cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cc
Confidence            5677888777543 34333 45677899998877666553311                   1124777776555   45


Q ss_pred             CCCCcEEEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ++|+||+++.++ .++++|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|++++|..
T Consensus       127 l~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-~~ape~~~~----~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08225         127 IKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL-AYTCVGTPY-YLSPEICQN----RPYNNKTDIWSLGCVLYELCTLKH  200 (257)
T ss_pred             CCHHHEEEcCCCCeEEecccccchhccCCccc-ccccCCCcc-ccCHHHHcC----CCCCchhhHHHHHHHHHHHHhCCC
Confidence            559999998885 4699999988766543221 111346667 999999877    678899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.. ....+....+..+..+++ +...+.+++++++
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  235 (257)
T cd08225         201 PFEG-NNLHQLVLKICQGYFAPI-SPNFSRDLRSLIS  235 (257)
T ss_pred             CCCC-ccHHHHHHHHhcccCCCC-CCCCCHHHHHHHH
Confidence            9987 344455555555554444 3356778888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.84  E-value=8e-20  Score=135.41  Aligned_cols=131  Identities=11%  Similarity=0.048  Sum_probs=89.8

Q ss_pred             HHHhC-CCCcEEEEEEeee-cCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          5 RAVFN-QDEIGVTVSSVKT-TDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         5 l~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++.+. |+|++. +.+... .+...+++++|+... ++.+.+..                  ..+.+||+.+++|   +|
T Consensus        51 l~~l~~h~~i~~-~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H---~d  125 (282)
T cd07831          51 LRRLSPHPNILR-LIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFH---RD  125 (282)
T ss_pred             HhhcCCCCCccc-eEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcee---cc
Confidence            44454 666654 444443 333678899998764 44433211                  1124777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++. +.+||+|||.+........  .....++.. |+|||.+..   ...++.++|+||+||++|+|++|.+|
T Consensus       126 l~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slGv~l~el~~~~~p  198 (282)
T cd07831         126 IKPENILIKD-DILKLADFGSCRGIYSKPP--YTEYISTRW-YRAPECLLT---DGYYGPKMDIWAVGCVFFEILSLFPL  198 (282)
T ss_pred             cCHHHEEEcC-CCeEEEecccccccccCCC--cCCCCCCcc-cCChhHhhc---CCCCCcchhHHHHHHHHHHHHcCCcC
Confidence            5599999999 9999999999876543322  222456667 999997654   13467899999999999999999999


Q ss_pred             CCC
Q psy17162        145 YDT  147 (182)
Q Consensus       145 f~~  147 (182)
                      |.+
T Consensus       199 ~~~  201 (282)
T cd07831         199 FPG  201 (282)
T ss_pred             CCC
Confidence            987

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.84  E-value=5.9e-20  Score=136.50  Aligned_cols=132  Identities=16%  Similarity=0.152  Sum_probs=96.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+.|+|++. +.+... +...+++++|+.....+...                   +.+  +.+||..+++|   +|
T Consensus        53 ~l~~l~~~~i~~-~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~--l~~LH~~~i~H---~d  125 (288)
T cd07833          53 VLRQLRHENIVN-LKEAFR-RKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQA--IAYCHSHNIIH---RD  125 (288)
T ss_pred             HHHhcCCCCeee-hhheEE-ECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHHCCeec---CC
Confidence            566777777654 444443 35678899998876654431                   122  34777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC-CCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS-NYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~-~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ++|+||+++.++.+||+|||.+...............++.. |+|||.+..    . .++.++|+||+|+++|+|++|++
T Consensus       126 l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~-~~~PE~~~~----~~~~~~~~Dv~slG~~l~~l~~g~~  200 (288)
T cd07833         126 IKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRW-YRAPELLVG----DTNYGKPVDVWAIGCIMAELLDGEP  200 (288)
T ss_pred             CCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccC-CcCCchhcC----CCCcCchhhHHHHHHHHHHHHhCCC
Confidence            55999999999999999999987755433211222556677 999999987    4 67789999999999999999999


Q ss_pred             CCCC
Q psy17162        144 PYDT  147 (182)
Q Consensus       144 pf~~  147 (182)
                      ||.+
T Consensus       201 ~~~~  204 (288)
T cd07833         201 LFPG  204 (288)
T ss_pred             CCCC
Confidence            9987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.84  E-value=1.1e-19  Score=134.98  Aligned_cols=137  Identities=18%  Similarity=0.140  Sum_probs=95.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|+|++.........+...+++++|+..++++.+.+..                  ....|||+.+++|   +|
T Consensus        57 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H---~d  133 (284)
T cd05081          57 EILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVH---RD  133 (284)
T ss_pred             HHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCcee---cc
Confidence            36777888877654433334455668899999888877765421                  1134777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.++|+|||++..........  .....+... |+|||.+.+    ..++.++|+||+|+++|+|++|.
T Consensus       134 lkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~~  208 (284)
T cd05081         134 LATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIF-WYAPESLTE----SKFSVASDVWSFGVVLYELFTYS  208 (284)
T ss_pred             CCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceE-eeCHHHhcc----CCcChHHHHHHHHHHHHHHhhcC
Confidence            55999999999999999999987654332110  111122334 899999877    67889999999999999999987


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      .|+..
T Consensus       209 ~~~~~  213 (284)
T cd05081         209 DKSCS  213 (284)
T ss_pred             CcCCC
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG4257|consensus

Probab=99.84  E-value=8.9e-21  Score=148.54  Aligned_cols=167  Identities=16%  Similarity=0.274  Sum_probs=124.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~   64 (182)
                      .|++.|.|++++..+.-+   .+..+.++||....+.+..+|...                  +..|||+.++.|+|+- 
T Consensus       443 ~iMrnfdHphIikLIGv~---~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIA-  518 (974)
T KOG4257|consen  443 SIMRNFDHPHIIKLIGVC---VEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIA-  518 (974)
T ss_pred             HHHHhCCCcchhheeeee---eccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhh-
Confidence            377889998887554333   345567788877777776654211                  2358888877776655 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                        ..|||++....|||+|||+++...+......+.. .-+.+|||||.+.-    ..++.++|+|-||+-+||++. |.-
T Consensus       519 --aRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~-kLPIKWmaPESINf----RrFTtASDVWMFgVCmWEIl~lGvk  591 (974)
T KOG4257|consen  519 --ARNILVSSPQCVKLADFGLSRYLEDDAYYKASRG-KLPIKWMAPESINF----RRFTTASDVWMFGVCMWEILSLGVK  591 (974)
T ss_pred             --hhheeecCcceeeecccchhhhccccchhhcccc-ccceeecCccccch----hcccchhhHHHHHHHHHHHHHhcCC
Confidence              9999999999999999999999887665333422 12336999999887    899999999999999999876 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHh-hhC
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI-TLW  182 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i-~~~  182 (182)
                      ||.+.. ..+.+.++.+|.+++.| .++|+.+..++ +||
T Consensus       592 Pfqgvk-NsDVI~~iEnGeRlP~P-~nCPp~LYslmskcW  629 (974)
T KOG4257|consen  592 PFQGVK-NSDVIGHIENGERLPCP-PNCPPALYSLMSKCW  629 (974)
T ss_pred             cccccc-ccceEEEecCCCCCCCC-CCCChHHHHHHHHHh
Confidence            999953 34677778889888885 45788777665 445

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.84  E-value=1.9e-20  Score=139.08  Aligned_cols=131  Identities=18%  Similarity=0.152  Sum_probs=90.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++. +.+... +...+++++++... ++.+.+                    .++  .|||..+++   |+
T Consensus        52 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al--~~LH~~~i~---H~  123 (284)
T cd07839          52 LLKELKHKNIVR-LYDVLH-SDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGL--AFCHSHNVL---HR  123 (284)
T ss_pred             HHHhcCCCCeee-HHHHhc-cCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCEe---cC
Confidence            566677877653 333433 45567888888764 343322                    222  477776654   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+||++|+|++|..
T Consensus       124 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~l~tg~~  198 (284)
T cd07839         124 DLKPQNLLINKNGELKLADFGLARAFGIPVRC-YSAEVVTLW-YRPPDVLFG---AKLYSTSIDMWSAGCIFAELANAGR  198 (284)
T ss_pred             CCCHHHEEEcCCCcEEECccchhhccCCCCCC-cCCCccccC-CcChHHHhC---CcccCcHHHHHHHHHHHHHHHhcCC
Confidence            56699999999999999999998765433221 112345666 999998865   1346789999999999999999887


Q ss_pred             CCCC
Q psy17162        144 PYDT  147 (182)
Q Consensus       144 pf~~  147 (182)
                      |+..
T Consensus       199 p~~~  202 (284)
T cd07839         199 PLFP  202 (284)
T ss_pred             CCcC
Confidence            7544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.84  E-value=1.2e-19  Score=132.45  Aligned_cols=169  Identities=20%  Similarity=0.321  Sum_probs=115.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++..+..........+++++++...+++.+.+..                 ....++|+.+++|.+   ++
T Consensus        52 ~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~d---l~  128 (260)
T cd06606          52 ILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRD---IK  128 (260)
T ss_pred             HHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC---CC
Confidence            5677888777654433333223667889998877776664311                 013477776655555   55


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.++|+|||.+......... ......++.. |++||....    ...+.++|+||+|++++++++|..||
T Consensus       129 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~-y~~pE~~~~----~~~~~~~Dv~slG~il~~l~~g~~p~  203 (260)
T cd06606         129 GANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPY-WMAPEVIRG----EEYGRAADIWSLGCTVIEMATGKPPW  203 (260)
T ss_pred             HHHEEEcCCCCEEEcccccEEecccccccccccCCCCCcc-ccCHhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999988766544310 0112456666 999999887    56789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ............+.. ...+.+ +..+++.+++++.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~  239 (260)
T cd06606         204 SELGNPMAALYKIGSSGEPPEI-PEHLSEEAKDFLRK  239 (260)
T ss_pred             CCCCchHHHHHhccccCCCcCC-CcccCHHHHHHHHH
Confidence            874334444444433 233444 45678888888753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.84  E-value=3.3e-20  Score=136.02  Aligned_cols=166  Identities=20%  Similarity=0.175  Sum_probs=112.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. ..... +...+++++++..++++...+..               +  .++++|+.+++|++   +
T Consensus        45 ~~l~~~~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~d---i  119 (265)
T cd05579          45 DILSQAQSPYVVKL-YYSFQ-GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRD---L  119 (265)
T ss_pred             HHHHhCCCcchhHH-HHhee-cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCC---C
Confidence            35667788777643 22222 45667889998877766553321               0  12478877665555   5


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh-------hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI-------IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~-------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +|+||+++.++.++|+|||++........       .......++.. |++||....    ...+.++|+||+|+++|++
T Consensus       120 ~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Pe~~~~----~~~~~~~Dv~slG~~~~~l  194 (265)
T cd05579         120 KPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPD-YIAPEVILG----QGHSKTVDWWSLGCILYEF  194 (265)
T ss_pred             CHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCcc-ccCHHHhcC----CCCCcchhhHHHHHHHHHH
Confidence            59999999999999999998865433211       01122345666 999999877    5678899999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      ++|..||.. ....+....+..+. ..++ ...+++.+.++++
T Consensus       195 ~~g~~p~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~  235 (265)
T cd05579         195 LVGIPPFHG-ETPEEIFQNILNGK-IEWPEDVEVSDEAIDLIS  235 (265)
T ss_pred             HhCCCCCCC-CCHHHHHHHHhcCC-cCCCccccCCHHHHHHHH
Confidence            999999987 44545454544433 2232 2234888888875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0664|consensus

Probab=99.84  E-value=1.4e-21  Score=139.98  Aligned_cols=111  Identities=20%  Similarity=0.337  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC
Q psy17162         40 VQKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP  119 (182)
Q Consensus        40 l~~~l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~  119 (182)
                      ++|++.++.  |||+.++.|+|++   |.|++++.+..+||||||+++.........++..+-+.+ |.|||.+.+   .
T Consensus       162 lYQILRGLK--YLHsA~ILHRDIK---PGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQY-YRAPEiLMG---a  232 (449)
T KOG0664|consen  162 VYQILRGLK--YLHTANILHRDIK---PGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQY-YRAPELLMG---A  232 (449)
T ss_pred             HHHHHhhhH--HHhhcchhhccCC---CccEEeccCceEEecccccccccchhhhhhhHHHHHHHH-hccHHHhhc---c
Confidence            566788888  9999988777666   999999999999999999998866554444555566778 999999987   3


Q ss_pred             CCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       120 ~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      ..|+.++||||.||++.|++.++..|.. ..+.+++..|..
T Consensus       233 RhYs~AvDiWSVGCIFaELLgRrILFQA-q~PiqQL~lItd  272 (449)
T KOG0664|consen  233 RRYTGAVDIWSVGCIFAELLQRKILFQA-AGPIEQLQMIID  272 (449)
T ss_pred             hhhcCccceehhhHHHHHHHhhhhhhhc-cChHHHHHHHHH
Confidence            5788999999999999999999999988 577777766643

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.84  E-value=5.3e-20  Score=137.03  Aligned_cols=169  Identities=20%  Similarity=0.231  Sum_probs=107.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.+++.++.+.+... ....+++++++..++++.+.+..               +  ...+||..+++|   +|++
T Consensus        57 ~l~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H---~dl~  132 (288)
T cd05583          57 VLEAVRRCPFLVTLHYAFQ-TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIY---RDIK  132 (288)
T ss_pred             HHHhccCCcchhhhheeee-cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeec---cCCC
Confidence            4556654444444444443 45567899999877766553211               0  124777766555   5556


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||++...............++.. |++||.+.+..  ...+.++|+||+|+++|+|++|..||.
T Consensus       133 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~  209 (288)
T cd05583         133 LENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIE-YMAPEVIRGGS--GGHDKAVDWWSLGVLTFELLTGASPFT  209 (288)
T ss_pred             HHHeEECCCCCEEEEECccccccccccccccccccCCcc-ccCHHHhcCCC--CCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence            999999999999999999987654332211112356667 99999987511  126788999999999999999999996


Q ss_pred             CCCC---cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGS---PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~---~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ....   ..+....+.... ++. +..++..+++++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~~li~~  245 (288)
T cd05583         210 VDGEQNSQSEISRRILKSK-PPF-PKTMSAEARDFIQK  245 (288)
T ss_pred             cCcccchHHHHHHHHHccC-CCC-CcccCHHHHHHHHH
Confidence            4211   122222233333 344 44577888887653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0662|consensus

Probab=99.84  E-value=5.4e-21  Score=129.43  Aligned_cols=148  Identities=19%  Similarity=0.197  Sum_probs=106.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH------------HHHHHHHHhhcchhc---ccccCCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL------------ETLRCIYIQDYHLCV---RSTRYFSVD   68 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------------~~~~~~~l~~~~~~h---~~~~~lk~~   68 (182)
                      +++-++|.|++ .+.++.. +++++.++++++.. ++.++.            .....+.|...++||   .-|||+||.
T Consensus        54 llkelkhkniv-rl~dvlh-sdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpq  130 (292)
T KOG0662|consen   54 LLKELKHKNIV-RLHDVLH-SDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQ  130 (292)
T ss_pred             HHHHhhhccee-ehhhhhc-cCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcc
Confidence            56778898886 4455555 56778888888653 444432            112233333444443   346667799


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPYDT  147 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~pf~~  147 (182)
                      |++++.+|.+|++|||+++..+-+..+. +..+-+.+ |.+|.++.+   ..-|+.+.|+||.||++.|+.. |.+.|.+
T Consensus       131 nllin~ngelkladfglarafgipvrcy-saevvtlw-yrppdvlfg---akly~tsidmwsagcifaelanagrplfpg  205 (292)
T KOG0662|consen  131 NLLINRNGELKLADFGLARAFGIPVRCY-SAEVVTLW-YRPPDVLFG---AKLYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_pred             eEEeccCCcEEecccchhhhcCCceEee-eceeeeee-ccCcceeee---eehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence            9999999999999999998887765432 22556778 999999987   3578899999999999999987 8888988


Q ss_pred             CCCcHHHHHHHhh
Q psy17162        148 WGSPFEQLKQVVQ  160 (182)
Q Consensus       148 ~~~~~~~~~~i~~  160 (182)
                       .+-.+++.+|..
T Consensus       206 -~dvddqlkrif~  217 (292)
T KOG0662|consen  206 -NDVDDQLKRIFR  217 (292)
T ss_pred             -CcHHHHHHHHHH
Confidence             455566766643

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.84  E-value=2.4e-19  Score=130.25  Aligned_cols=164  Identities=24%  Similarity=0.355  Sum_probs=112.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.+++++ .+.+... +....++++++..+.++.+.+...                  ...++|..+   ..|+|+
T Consensus        50 ~l~~l~~~~i~-~~~~~~~-~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl  124 (253)
T cd05122          50 ILKKCKHPNIV-KYYGSYL-KKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDI  124 (253)
T ss_pred             HHHhCCCCCEe-EEEEEEe-cCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCC
Confidence            45667766655 4444444 346677888888877766643211                  123666655   455666


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+........  .....++.. |++||.+..    ...+.++|+||+|+++|++++|..||
T Consensus       125 ~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~-~~~PE~~~~----~~~~~~~Dv~slG~il~~l~~g~~p~  197 (253)
T cd05122         125 KAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTMVGTPY-WMAPEVING----KPYDYKADIWSLGITAIELAEGKPPY  197 (253)
T ss_pred             CHHHEEEccCCeEEEeecccccccccccc--ccceecCCc-ccCHHHHcC----CCCCccccHHHHHHHHHHHHhCCCCC
Confidence            69999999999999999999877654431  122456666 999999887    56788999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCC-CCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPG-EFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~-~~s~~~~~~i~  180 (182)
                      .. .........+.....+.++.. .++.++.++++
T Consensus       198 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  232 (253)
T cd05122         198 SE-LPPMKALFKIATNGPPGLRNPEKWSDEFKDFLK  232 (253)
T ss_pred             CC-CchHHHHHHHHhcCCCCcCcccccCHHHHHHHH
Confidence            87 334444444444444444322 34788888875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.84  E-value=1.2e-19  Score=133.10  Aligned_cols=159  Identities=18%  Similarity=0.229  Sum_probs=104.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++.. ..... +....++++|+...+++.+++..                  ....|+|+.+++|   +|+
T Consensus        52 ~l~~~~h~~iv~~-~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH---~dl  126 (258)
T cd05078          52 MMSQLSHKHLVLN-YGVCV-CGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTH---GNV  126 (258)
T ss_pred             HHHhCCCCChhhe-eeEEE-eCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec---CCC
Confidence            5667778777644 44443 34557889999888887665421                  1134777766555   555


Q ss_pred             CCCcEEEcCCCe--------EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFL--------LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        66 k~~nil~~~~~~--------~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      ||+||+++.++.        ++++|||.+........     ..++.. |+|||++..   ...++.++|+||+|+++|+
T Consensus       127 kp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~~l~~  197 (258)
T cd05078         127 CAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEI-----LLERIP-WVPPECIEN---PQNLSLAADKWSFGTTLWE  197 (258)
T ss_pred             ccceEEEecccccccCCCceEEecccccccccCCchh-----ccccCC-ccCchhccC---CCCCCchhhHHHHHHHHHH
Confidence            599999987654        69999998866543222     456667 999999875   1346789999999999999


Q ss_pred             HHhC-CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        138 LATG-RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |++| .+||.. ..+.... ..... .+.+| ...+.++.++++
T Consensus       198 l~~g~~~~~~~-~~~~~~~-~~~~~-~~~~~-~~~~~~~~~li~  237 (258)
T cd05078         198 IFSGGDKPLSA-LDSQKKL-QFYED-RHQLP-APKWTELANLIN  237 (258)
T ss_pred             HHcCCCCChhh-ccHHHHH-HHHHc-cccCC-CCCcHHHHHHHH
Confidence            9998 577765 3332222 22222 23443 335567777764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.84  E-value=1.1e-19  Score=135.59  Aligned_cols=141  Identities=17%  Similarity=0.202  Sum_probs=96.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++ .+.+... +....++++++.. +.+.+.                    +.++  .|+|+.++   .|+
T Consensus        56 ~l~~l~h~ni~-~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L--~~lH~~~i---~H~  127 (291)
T cd07870          56 LLKGLKHANIV-LLHDIIH-TKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGL--AYIHGQHI---LHR  127 (291)
T ss_pred             HHHhcCCCCEe-EEEEEEe-cCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHH--HHHHhCCc---ccC
Confidence            56778887765 5555555 4556778888875 333222                    2223  37777665   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|..
T Consensus       128 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~~l~~l~~g~~  202 (291)
T cd07870         128 DLKPQNLLISYLGELKLADFGLARAKSIPSQT-YSSEVVTLW-YRPPDVLLG---ATDYSSALDIWGAGCIFIEMLQGQP  202 (291)
T ss_pred             CCChHHEEEcCCCcEEEeccccccccCCCCCC-CCCcccccc-ccCCceeec---CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            56699999999999999999988654332211 111345666 999998864   1346788999999999999999999


Q ss_pred             CCCCCCCcHHHHHH
Q psy17162        144 PYDTWGSPFEQLKQ  157 (182)
Q Consensus       144 pf~~~~~~~~~~~~  157 (182)
                      ||.+.....+.+..
T Consensus       203 ~f~~~~~~~~~~~~  216 (291)
T cd07870         203 AFPGVSDVFEQLEK  216 (291)
T ss_pred             CCCCchhHHHHHHH
Confidence            99874433343333

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.84  E-value=6.3e-20  Score=134.01  Aligned_cols=162  Identities=21%  Similarity=0.271  Sum_probs=114.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------H--HHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------L--RCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~--~~~~l~~~~~~h~~~   62 (182)
                      +++.+.|+|++. +.+... +....++++++..+.++.+.+..                   +  +..+||+.+++|   
T Consensus        52 ~l~~l~~~~i~~-~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h---  126 (256)
T cd08530          52 ILASVNHPNIIS-YKEAFL-DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILH---  126 (256)
T ss_pred             HHHhCCCCCchh-hhhhhc-cCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCccc---
Confidence            556677766653 333333 34677889998877766543311                   1  124777776554   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ++++|+||+++.++.+||+|||.+........  .. ..++.. |++||.+.+    ..++.++|+||+|+++|++++|+
T Consensus       127 ~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--~~-~~~~~~-~~~Pe~~~~----~~~~~~~D~~slG~~~~~l~~g~  198 (256)
T cd08530         127 RDLKSANILLVANDLVKIGDLGISKVLKKNMA--KT-QIGTPH-YMAPEVWKG----RPYSYKSDIWSLGCLLYEMATFA  198 (256)
T ss_pred             CCCCcceEEEecCCcEEEeeccchhhhccCCc--cc-ccCCcc-ccCHHHHCC----CCCCchhhHHHHHHHHHHHHhCC
Confidence            55669999999999999999999877654422  12 446666 999999987    67788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.. .........+..+..+.+ +..++.+++++++
T Consensus       199 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  234 (256)
T cd08530         199 PPFEA-RSMQDLRYKVQRGKYPPI-PPIYSQDLQNFIR  234 (256)
T ss_pred             CCCCC-CCHHHHHHHHhcCCCCCC-chhhCHHHHHHHH
Confidence            99987 344444555555655555 3467888888875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=1e-19  Score=138.46  Aligned_cols=134  Identities=19%  Similarity=0.212  Sum_probs=94.2

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHH------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+ +|+|++..+..+...+...+++++|+... ++...                  +.++  .+||+.+++|+   |
T Consensus        59 ~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L--~~LH~~~i~H~---d  132 (337)
T cd07852          59 FLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKAL--KYIHSGNVIHR---D  132 (337)
T ss_pred             HHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeecC---C
Confidence            56677 77776644433334345567889988753 44332                  2233  47887766555   5


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh----hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI----IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~----~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      ++|+||+++.++.+||+|||.+........    .......++.. |+|||.+..   ...++.++|+||+|+++|+|++
T Consensus       133 l~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~sDi~slG~~l~el~t  208 (337)
T cd07852         133 LKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRW-YRAPEILLG---STRYTKGVDMWSVGCILGEMLL  208 (337)
T ss_pred             CCHHHEEEcCCCcEEEeeccchhccccccccccCcchhccccccc-ccCceeeec---cccccccchHHHHHHHHHHHHh
Confidence            559999999999999999999876543221    01122456777 999998764   1456788999999999999999


Q ss_pred             CCCCCCC
Q psy17162        141 GRFPYDT  147 (182)
Q Consensus       141 g~~pf~~  147 (182)
                      |++||.+
T Consensus       209 g~~pf~~  215 (337)
T cd07852         209 GKPLFPG  215 (337)
T ss_pred             CCCCCCC
Confidence            9999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.84  E-value=1.2e-19  Score=135.44  Aligned_cols=144  Identities=15%  Similarity=0.131  Sum_probs=95.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCC----ceEEEeccCccchHHHHHHH----------------------HHHHHHhhcch
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDK----KVVLVTGKGEAEKVQKELET----------------------LRCIYIQDYHL   57 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~----------------------~~~~~l~~~~~   57 (182)
                      +++.+.++++++.+.++......    .+++++++... ++.+.+..                      ..+.|||..++
T Consensus        53 ~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  131 (295)
T cd07837          53 LLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV  131 (295)
T ss_pred             HHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            56667665555555555543332    37889988765 44332210                      11347887765


Q ss_pred             hcccccCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      +|   +|++|+||+++. ++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|
T Consensus       132 ~H---~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~---~~~~~~~~Di~slG~~l~  203 (295)
T cd07837         132 MH---RDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS-YTHEIVTLW-YRAPEVLLG---STHYSTPVDIWSVGCIFA  203 (295)
T ss_pred             ee---cCCChHHEEEecCCCeEEEeecccceecCCCccc-cCCcccccC-CCChHHhhC---CCCCCchHHHHHHHHHHH
Confidence            55   455599999998 789999999988654332110 111345566 999998764   135678999999999999


Q ss_pred             HHHhCCCCCCCCCCcHHHHHH
Q psy17162        137 ELATGRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       137 ~l~~g~~pf~~~~~~~~~~~~  157 (182)
                      +|++|..||.+. .+.....+
T Consensus       204 ~l~~g~~~~~~~-~~~~~~~~  223 (295)
T cd07837         204 EMSRKQPLFPGD-SELQQLLH  223 (295)
T ss_pred             HHHcCCCCCCCC-CHHHHHHH
Confidence            999999999873 44444433

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.84  E-value=1.9e-19  Score=132.87  Aligned_cols=168  Identities=18%  Similarity=0.291  Sum_probs=110.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+.|+|++ .+.+... +...+++++|+..++++.+.+..                 ....++|+.+++   |+|++
T Consensus        61 ~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~---H~dl~  135 (272)
T cd06629          61 TLKDLDHLNIV-QYLGFET-TEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGIL---HRDLK  135 (272)
T ss_pred             HHHhcCCCCcc-eEEEEec-cCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCee---ecCCC
Confidence            46667777765 4444444 45678899999877776554211                 113477776654   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.++++|||.+......... ......++.. |+|||.+....  ..++.++|+||+|+++|++++|..||
T Consensus       136 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~  212 (272)
T cd06629         136 ADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVF-WMAPEVIHSYS--QGYSAKVDIWSLGCVVLEMFAGRRPW  212 (272)
T ss_pred             hhhEEEcCCCeEEEeeccccccccccccccccccccCCcc-ccCHHHhcccc--CCCCccchhHHHHHHHHHHHhCCCCC
Confidence            99999999999999999998764432110 0112346666 99999987611  23678999999999999999999999


Q ss_pred             CCCCCcHHHHHHHh-hCCCCCCCCC---CCCHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVV-QDDPPRLPPG---EFSSDFKDFIT  180 (182)
Q Consensus       146 ~~~~~~~~~~~~i~-~~~~~~~~~~---~~s~~~~~~i~  180 (182)
                      ... ........+. ....+.+++.   .++.+++++++
T Consensus       213 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  250 (272)
T cd06629         213 SDE-EAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLN  250 (272)
T ss_pred             cCc-chHHHHHHhhccccCCcCCccccccCCHHHHHHHH
Confidence            763 3333333332 2233334322   45788888876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=1.5e-19  Score=134.77  Aligned_cols=140  Identities=18%  Similarity=0.179  Sum_probs=96.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      ++++.++|+|++ .+.++.. +....++++|+... ++.+.+                    .++  .|||+.+++|   
T Consensus        55 ~~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al--~~lH~~~i~H---  126 (291)
T cd07844          55 SLLKDLKHANIV-TLHDIIH-TKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGL--AYCHQRRVLH---  126 (291)
T ss_pred             HHHhhCCCccee-eEEEEEe-cCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH--HHHHhCCeec---
Confidence            356778887765 4555554 55678899998774 554432                    222  4777776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|.
T Consensus       127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~---~~~~~~~~Dv~slG~il~~l~~g~  201 (291)
T cd07844         127 RDLKPQNLLISERGELKLADFGLARAKSVPSKT-YSNEVVTLW-YRPPDVLLG---STEYSTSLDMWGVGCIFYEMATGR  201 (291)
T ss_pred             ccCCHHHEEEcCCCCEEECccccccccCCCCcc-ccccccccc-cCCcHHhhc---CcccCcHHHHHHHHHHHHHHHhCC
Confidence            555599999999999999999988654322110 111334556 999998864   135678999999999999999999


Q ss_pred             CCCCCCCCcHHHH
Q psy17162        143 FPYDTWGSPFEQL  155 (182)
Q Consensus       143 ~pf~~~~~~~~~~  155 (182)
                      .||.+.....+.+
T Consensus       202 ~~~~~~~~~~~~~  214 (291)
T cd07844         202 PLFPGSTDVEDQL  214 (291)
T ss_pred             CCCCCCccHHHHH
Confidence            9997633233333

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.83  E-value=1.8e-19  Score=134.54  Aligned_cols=142  Identities=17%  Similarity=0.182  Sum_probs=95.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH---------------------HHHHHHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK---------------------ELETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------~l~~~~~~~l~~~~~~h~~   61 (182)
                      ++++.++|+|++. +.+... +....++++|+... .+.+                     .+.++  .|||..+++|  
T Consensus        53 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL--~~LH~~~i~H--  125 (294)
T PLN00009         53 SLLKEMQHGNIVR-LQDVVH-SEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGI--AYCHSHRVLH--  125 (294)
T ss_pred             HHHHhccCCCEee-EEEEEe-cCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHH--HHHHhCCeeC--
Confidence            3677788877654 444444 45678888988643 3322                     22333  4788776555  


Q ss_pred             ccCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         62 TRYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        62 ~~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                       ++++|+||+++. ++.+||+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++
T Consensus       126 -~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~---~~~~~~~~Dv~slG~i~~~l~t  199 (294)
T PLN00009        126 -RDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT-FTHEVVTLW-YRAPEILLG---SRHYSTPVDIWSVGCIFAEMVN  199 (294)
T ss_pred             -CCCCcceEEEECCCCEEEEcccccccccCCCccc-cccCceeec-ccCHHHHhC---CCCCCcHHHHHHHHHHHHHHHh
Confidence             455599999985 467999999998654332211 122345666 999998865   1356789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHH
Q psy17162        141 GRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i  158 (182)
                      |.+||.+ ....+.+.++
T Consensus       200 g~~pf~~-~~~~~~~~~~  216 (294)
T PLN00009        200 QKPLFPG-DSEIDELFKI  216 (294)
T ss_pred             CCCCCCC-CCHHHHHHHH
Confidence            9999987 3444444443

>KOG1151|consensus

Probab=99.83  E-value=3.2e-20  Score=140.79  Aligned_cols=173  Identities=21%  Similarity=0.247  Sum_probs=121.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      |++.+.|+.+ +.++++...+...+..|.||+++.+|-=+|                   .++.  ||.+.. -.+.|.|
T Consensus       520 IHKeLDHpRI-VKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~--YLNEik-pPIIHYD  595 (775)
T KOG1151|consen  520 IHKELDHPRI-VKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALK--YLNEIK-PPIIHYD  595 (775)
T ss_pred             hhhccCccee-eeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHH--HHhccC-CCeeeec
Confidence            6777777665 477888888888899999999988864433                   2222  554432 2356778


Q ss_pred             CCCCcEEEcC---CCeEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         65 FSVDTFHQRL---QFLLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        65 lk~~nil~~~---~~~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      |||.|||+..   .|.+||.|||+++...+...-      .-+.+.|+-+ |++||.+.-..-+...+.++|+||+|+++
T Consensus       596 LKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYW-YLPPEcFvVgkePPKIsnKVDVWSvGVIF  674 (775)
T KOG1151|consen  596 LKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYW-YLPPECFVVGKEPPKISNKVDVWSVGVIF  674 (775)
T ss_pred             cCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceee-ecCcceeecCCCCCccccceeeEeeehhh
Confidence            8899999853   478999999999876543220      1123678888 99999887532234667899999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHH--HhhCCCCCCCCC-CCCHHHHHHhhh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQ--VVQDDPPRLPPG-EFSSDFKDFITL  181 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~--i~~~~~~~~~~~-~~s~~~~~~i~~  181 (182)
                      |..+.|+-||-......+++..  |+......||+. -+|+++++||++
T Consensus       675 yQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRR  723 (775)
T KOG1151|consen  675 YQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRR  723 (775)
T ss_pred             hhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHH
Confidence            9999999999763333333322  455444556543 589999999985

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.83  E-value=1.9e-19  Score=136.48  Aligned_cols=136  Identities=20%  Similarity=0.235  Sum_probs=93.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++. +.+... ++..+++++++...+++.+.+..                   ....|||+.+++   |+|
T Consensus        52 ~l~~l~hpniv~-~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii---H~d  126 (327)
T cd08227          52 VSKLFNHPNIVP-YRATFI-ADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYV---HRS  126 (327)
T ss_pred             HHHhcCCCCeee-EEEEEE-ECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEe---cCC
Confidence            567788877765 444444 44567889998877666543311                   123477777655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +||+||+++.++.++++||+.+..........      .....++.. |+|||++....  ..++.++|+||+||++|+|
T Consensus       127 lkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~--~~~~~~~DiwslG~il~el  203 (327)
T cd08227         127 VKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLP-WLSPEVLQQNL--QGYDAKSDIYSVGITACEL  203 (327)
T ss_pred             CChhhEEEecCCcEEEcccchhhccccccccccccccccccccceec-ccChHHhhccc--CCCCchhhHHHHHHHHHHH
Confidence            66999999999999999998654332111100      011234556 99999987511  3578899999999999999


Q ss_pred             HhCCCCCCC
Q psy17162        139 ATGRFPYDT  147 (182)
Q Consensus       139 ~~g~~pf~~  147 (182)
                      ++|..||..
T Consensus       204 ~~g~~pf~~  212 (327)
T cd08227         204 ANGHVPFKD  212 (327)
T ss_pred             HHCCCCCCC
Confidence            999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.83  E-value=1.7e-19  Score=133.86  Aligned_cols=144  Identities=17%  Similarity=0.139  Sum_probs=99.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.+... +...+++++++. ..++.+.+..                  ....++|+.+++|   +|+
T Consensus        52 ~l~~~~~~~i~~-~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~dl  125 (286)
T cd07832          52 ALQACQHPYVVK-LLDVFP-HGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMH---RDL  125 (286)
T ss_pred             HHHhCCCCCCcc-eeeEEe-cCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec---CCc
Confidence            567788777654 444444 356788999988 7776654311                  1134777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+...............++.. |+|||.+..   ...++.++|+||+|+++|+|++|.+||
T Consensus       126 ~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slG~~l~~l~tg~~~~  201 (286)
T cd07832         126 KPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRW-YRAPELLYG---ARKYDPGVDLWAVGCIFAELLNGSPLF  201 (286)
T ss_pred             CHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCccc-ccCceeeec---cccCCchhHHHHHHHHHHHHHcCCcCc
Confidence            5999999999999999999987654432111122456677 999998865   134578999999999999999999988


Q ss_pred             CCCCCcHHHHHHH
Q psy17162        146 DTWGSPFEQLKQV  158 (182)
Q Consensus       146 ~~~~~~~~~~~~i  158 (182)
                      .+ .........+
T Consensus       202 ~~-~~~~~~~~~~  213 (286)
T cd07832         202 PG-ENDIEQLAIV  213 (286)
T ss_pred             CC-CCHHHHHHHH
Confidence            77 3443444333

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG2345|consensus

Probab=99.83  E-value=3.2e-21  Score=135.88  Aligned_cols=174  Identities=16%  Similarity=0.191  Sum_probs=108.8

Q ss_pred             HHHHhCCCCcEEEEE-Eee-ec-CCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVS-SVK-TT-DDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~~~h   59 (182)
                      ..+.|+++|++..+. .+. .. .....|++..|-..+++.+.+...                     ...++|+... .
T Consensus        71 ~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~  149 (302)
T KOG2345|consen   71 NHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-P  149 (302)
T ss_pred             HHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-c
Confidence            467788866653221 111 11 234567888888888887754221                     1235555541 1


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-----h---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-----I---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSL  131 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-----~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwsl  131 (182)
                      -.|+|+||.||+++.++.+++.|||.+....-...     .   ......++.+ |+|||.+....+ ...+.++|||||
T Consensus       150 yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p-yRAPELf~vk~~-~ti~ertDIWSL  227 (302)
T KOG2345|consen  150 YAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP-YRAPELFNVKSH-CTITERTDIWSL  227 (302)
T ss_pred             ccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc-ccCchheecccC-cccccccchhhh
Confidence            45666779999999999999999999876432111     0   0111346778 999999886433 466799999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhh
Q psy17162        132 GISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       132 g~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~  180 (182)
                      ||++|+|+.|..||.-......-+...+......+| ...+|..+.++|+
T Consensus       228 GCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik  277 (302)
T KOG2345|consen  228 GCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIK  277 (302)
T ss_pred             hHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHH
Confidence            999999999999996411100111222233344554 2357777777764

>KOG1094|consensus

Probab=99.83  E-value=1.7e-20  Score=145.84  Aligned_cols=167  Identities=17%  Similarity=0.234  Sum_probs=115.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~~   64 (182)
                      +|..++|+|++ .+..+.. .++.+.+++||.++++|-+++.+-                   ..+||.++.+.|+++- 
T Consensus       588 iLsqLkhPNIv-eLvGVC~-~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a-  664 (807)
T KOG1094|consen  588 ILSRLKHPNIV-ELLGVCV-QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLA-  664 (807)
T ss_pred             HHhccCCCCee-EEEeeee-cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhcccc-
Confidence            67778888876 4444444 456688999999999999976332                   2358888777666655 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh--C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT--G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~--g  141 (182)
                        ++|+|++.++++||+|||+++.+-.+...+ ....+-.. +|||+|.+.-    +.++.++|+|++|+++||+++  .
T Consensus       665 --~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpi-RwmawEsill----gkFttaSDvWafgvTlwE~~~~C~  737 (807)
T KOG1094|consen  665 --TRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPI-RWMAWESILL----GKFTTASDVWAFGVTLWEVFMLCR  737 (807)
T ss_pred             --ccceeecCcccEEecCcccccccccCCceeeecceeeee-eehhHHHHHh----ccccchhhhhhhHHHHHHHHHHHh
Confidence              999999999999999999998654333211 11122223 4999999988    899999999999999999765  8


Q ss_pred             CCCCCCCCCcHHHHHHH---hhCC----CCCCCCCCCCHH-HHHHhhhC
Q psy17162        142 RFPYDTWGSPFEQLKQV---VQDD----PPRLPPGEFSSD-FKDFITLW  182 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i---~~~~----~~~~~~~~~s~~-~~~~i~~~  182 (182)
                      +.||+.+ .+.+.+.+.   ....    .++. |.-++.+ .+-+++||
T Consensus       738 e~Py~~l-t~e~vven~~~~~~~~~~~~~l~~-P~~cp~~lyelml~Cw  784 (807)
T KOG1094|consen  738 EQPYSQL-TDEQVVENAGEFFRDQGRQVVLSR-PPACPQGLYELMLRCW  784 (807)
T ss_pred             hCchhhh-hHHHHHHhhhhhcCCCCcceeccC-CCcCcHHHHHHHHHHh
Confidence            8999884 333444332   1111    1122 4445655 45567777

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.83  E-value=1.3e-19  Score=134.61  Aligned_cols=140  Identities=19%  Similarity=0.163  Sum_probs=95.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH---------------------HHHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE---------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++.. .+... +...+++++|+... .+...                     +.++  .|||..+++|   
T Consensus        52 ~l~~l~h~~i~~~-~~~~~-~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l--~~lh~~~i~H---  123 (284)
T cd07860          52 LLKELNHPNIVKL-LDVIH-TENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGL--AFCHSHRVLH---  123 (284)
T ss_pred             HHHhcCCCCCcch-hhhcc-cCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHH--HHHHHCCeec---
Confidence            5677788776643 34433 45677888888642 33322                     2333  4888776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ++++|+||+++.++.+||+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|+||.
T Consensus       124 ~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~il~~l~tg~  198 (284)
T cd07860         124 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRT-YTHEVVTLW-YRAPEILLG---CKYYSTAVDIWSLGCIFAEMVTRR  198 (284)
T ss_pred             CCCCHHHEEECCCCCEEEeeccchhhcccCccc-ccccccccc-ccCCeEEec---CCCCCcHHHHHHHHHHHHHHHHCC
Confidence            556699999999999999999988655432211 111345566 999998865   123578899999999999999999


Q ss_pred             CCCCCCCCcHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQ  157 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~  157 (182)
                      .||.+ ....+...+
T Consensus       199 ~p~~~-~~~~~~~~~  212 (284)
T cd07860         199 ALFPG-DSEIDQLFR  212 (284)
T ss_pred             CCCCC-CCHHHHHHH
Confidence            99987 344344433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.83  E-value=2.1e-19  Score=133.30  Aligned_cols=143  Identities=17%  Similarity=0.166  Sum_probs=97.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecC-CCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD-DKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++.. .++.... ....++++++... ++...                    +.+  ..+||..++.|   
T Consensus        51 ~l~~l~~~~i~~~-~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~a--l~~LH~~~~~h---  123 (287)
T cd07840          51 LLQKLRHPNIVRL-KEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEG--LQYLHSNGILH---  123 (287)
T ss_pred             HHHhccCCCeeeh-eeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHH--HHHHHHCCcee---
Confidence            5677787776544 4444433 3678888888753 33332                    122  34788776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|++|+||+++.++.++|+|||.+...............++.. |+|||.+.+   ...++.++|+||+|+++|+|++|+
T Consensus       124 ~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~---~~~~~~~~Dv~slG~~l~el~t~~  199 (287)
T cd07840         124 RDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLW-YRPPELLLG---ATRYGPEVDMWSVGCILAELFLGK  199 (287)
T ss_pred             ccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccc-cCCceeeEc---cccCChHHHHHHHHHHHHHHHhCC
Confidence            5555999999999999999999987665432111122345566 999998764   135678999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQV  158 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i  158 (182)
                      .||... .....+..+
T Consensus       200 ~p~~~~-~~~~~~~~~  214 (287)
T cd07840         200 PIFQGS-TELEQLEKI  214 (287)
T ss_pred             CCCCCC-ChHHHHHHH
Confidence            999873 343444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.6e-19  Score=131.52  Aligned_cols=165  Identities=21%  Similarity=0.254  Sum_probs=112.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++..+ +... ++..+++++++...+++.+.+..                 ....++|+.+++   |+++
T Consensus        45 ~~l~~l~h~~i~~~~-~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~---H~~l  119 (250)
T cd05123          45 NILSRINHPFIVKLH-YAFQ-TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGII---YRDL  119 (250)
T ss_pred             HHHHHcCCCcHHHHH-HHee-cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce---ecCC
Confidence            466778877765332 2222 56678899998877777664321                 112367765554   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |++||....    ...+.++|+||+|+++|++++|..||
T Consensus       120 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~-~~~Pe~~~~----~~~~~~~D~~slG~~~~~l~~g~~p~  193 (250)
T cd05123         120 KPENILLDADGHIKLTDFGLAKELSSEGSR-TNTFCGTPE-YLAPEVLLG----KGYGKAVDWWSLGVLLYEMLTGKPPF  193 (250)
T ss_pred             CcceEEEcCCCcEEEeecCcceecccCCCc-ccCCcCCcc-ccChHHhCC----CCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            699999999999999999988765443111 122455666 999999877    56778999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .. .........+.. ...++ +...++.+.+++++
T Consensus       194 ~~-~~~~~~~~~~~~-~~~~~-~~~~~~~l~~~i~~  226 (250)
T cd05123         194 YA-EDRKEIYEKILK-DPLRF-PEFLSPEARDLISG  226 (250)
T ss_pred             CC-CCHHHHHHHHhc-CCCCC-CCCCCHHHHHHHHH
Confidence            77 333333444444 33445 45568888888763

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.82  E-value=5.9e-19  Score=130.72  Aligned_cols=159  Identities=17%  Similarity=0.244  Sum_probs=102.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.|+|++.. ..+.. +....++++||..++++...+..                  ....|+|+.+++   |+|+
T Consensus        69 ~~~~l~h~niv~~-~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii---H~dl  143 (274)
T cd05076          69 LMSQVSHIHLAFV-HGVCV-RGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLV---HGNV  143 (274)
T ss_pred             HHhcCCCCCeeeE-EEEEE-eCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCcc---CCCC
Confidence            5667788777644 44444 44567889999888887654311                  123577777655   5556


Q ss_pred             CCCcEEEcCCC-------eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQF-------LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        66 k~~nil~~~~~-------~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      ||+||+++..+       .+|++|||.+........     ..++.. |+|||.+..   ...++.++|+||+|+++|++
T Consensus       144 kp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~-~~aPe~~~~---~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         144 CAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREE-----RVERIP-WIAPECVPG---GNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             CcccEEEeccCcccCccceeeecCCccccccccccc-----cccCCc-ccCchhhcC---CCCCCcHHHHHHHHHHHHHH
Confidence            69999997543       489999998754432211     345667 999998865   13578899999999999998


Q ss_pred             H-hCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        139 A-TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       139 ~-~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      + +|+.||.+. .+.+. ....... ..+| ...++++.++++
T Consensus       215 ~~~g~~p~~~~-~~~~~-~~~~~~~-~~~~-~~~~~~~~~li~  253 (274)
T cd05076         215 CFDGEVPLKER-TPSEK-ERFYEKK-HRLP-EPSCKELATLIS  253 (274)
T ss_pred             HhCCCCCcccc-ChHHH-HHHHHhc-cCCC-CCCChHHHHHHH
Confidence            5 699999873 33222 2222221 2232 234567777664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.82  E-value=2.5e-19  Score=131.88  Aligned_cols=166  Identities=17%  Similarity=0.219  Sum_probs=109.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.+... +...+++++++..++++.+.+..                 .+..+||+.+++   |+|++
T Consensus        56 ~l~~l~h~~iv-~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~---H~~i~  130 (268)
T cd06630          56 LMARLNHPHII-RMLGATC-EDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQII---HRDVK  130 (268)
T ss_pred             HHHHcCCCcee-hhhceec-cCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCee---cCCCC
Confidence            55667777765 4444443 45567888898887777654311                 012477776554   55566


Q ss_pred             CCcEEEcCCC-eEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         67 VDTFHQRLQF-LLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        67 ~~nil~~~~~-~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |+||+++.++ .++|+|||.+.........   ......++.. |+|||.+..    ..++.++|+||+|+++|++++|.
T Consensus       131 ~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~-~~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~g~  205 (268)
T cd06630         131 GANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIA-FMAPEVLRG----EQYGRSCDVWSVGCVIIEMATAK  205 (268)
T ss_pred             HHHEEEcCCCCEEEEcccccccccccccccCCccccccccccc-eeCHhHhcc----CCCCcccchHHHHHHHHHHHhCC
Confidence            9999998775 6899999998765443210   0111345666 999999877    67789999999999999999999


Q ss_pred             CCCCCCC--CcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWG--SPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~--~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||....  ........+.. ...+.+ +...++++++++.
T Consensus       206 ~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  245 (268)
T cd06630         206 PPWNAEKHSNHLALIFKIASATTAPSI-PEHLSPGLRDVTL  245 (268)
T ss_pred             CCCCCCCCcchHHHHHHHhccCCCCCC-chhhCHHHHHHHH
Confidence            9997521  12222222222 233444 4567888888874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.82  E-value=8e-20  Score=135.75  Aligned_cols=132  Identities=13%  Similarity=0.147  Sum_probs=94.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++. +.+... +...+++++|+.....+...                   +.+  ..|||+.+++|++   
T Consensus        53 ~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~--l~~LH~~~i~h~~---  125 (286)
T cd07846          53 MLKQLRHENLVN-LIEVFR-RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRG--IEFCHSHNIIHRD---  125 (286)
T ss_pred             HHHhcCCcchhh-HHHhcc-cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHH--HHHHHHCCccccC---
Confidence            566777777653 333333 56678899998876655432                   222  3488888766555   


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||++......... .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|.+|
T Consensus       126 l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~~l~el~~g~~~  200 (286)
T cd07846         126 IKPENILVSQSGVVKLCDFGFARTLAAPGEV-YTDYVATRW-YRAPELLVG---DTKYGRAVDIWAVGCLVTEMLTGEPL  200 (286)
T ss_pred             CCHHHEEECCCCcEEEEeeeeeeeccCCccc-cCcccceee-ccCcHHhcc---ccccCchHhHHHHHHHHHHHHcCCCC
Confidence            5599999999999999999998765433221 122445666 999998865   13466889999999999999999999


Q ss_pred             CCC
Q psy17162        145 YDT  147 (182)
Q Consensus       145 f~~  147 (182)
                      |.+
T Consensus       201 ~~~  203 (286)
T cd07846         201 FPG  203 (286)
T ss_pred             CCC
Confidence            976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.82  E-value=3.4e-19  Score=133.38  Aligned_cols=140  Identities=20%  Similarity=0.123  Sum_probs=94.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecC---------CCceEEEeccCccchHHH--------------------HHHHHHHHHHhh
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD---------DKKVVLVTGKGEAEKVQK--------------------ELETLRCIYIQD   54 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~--------------------~l~~~~~~~l~~   54 (182)
                      +++.++|+|++.. .++....         ...+++++++..+ .+.+                    .+.++  .|||+
T Consensus        59 ~~~~l~h~~i~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL--~~LH~  134 (302)
T cd07864          59 ILRQLNHRNIVNL-KEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGL--NYCHK  134 (302)
T ss_pred             HHHhCCCCCeeee-eheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHH--HHHHh
Confidence            5667788777653 3333322         2367788888765 2222                    12333  48888


Q ss_pred             cchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         55 YHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        55 ~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      .+++|   +|++|+||+++.++.+||+|||.+...............++.. |++||.+..   ...++.++|+||+||+
T Consensus       135 ~~i~H---~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~---~~~~~~~~Di~slG~~  207 (302)
T cd07864         135 KNFLH---RDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLW-YRPPELLLG---EERYGPAIDVWSCGCI  207 (302)
T ss_pred             CCeec---CCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccC-ccChHHhcC---CCCCCchhHHHHHHHH
Confidence            76655   4555999999999999999999987654332111121234556 999998864   1346789999999999


Q ss_pred             HHHHHhCCCCCCCCCCcHHHH
Q psy17162        135 LIELATGRFPYDTWGSPFEQL  155 (182)
Q Consensus       135 l~~l~~g~~pf~~~~~~~~~~  155 (182)
                      +|+|++|++||.. ....+.+
T Consensus       208 ~~el~~g~~~~~~-~~~~~~~  227 (302)
T cd07864         208 LGELFTKKPIFQA-NQELAQL  227 (302)
T ss_pred             HHHHHhCCCCCCC-CChHHHH
Confidence            9999999999986 3443433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0665|consensus

Probab=99.82  E-value=1.5e-20  Score=136.62  Aligned_cols=144  Identities=17%  Similarity=0.214  Sum_probs=105.5

Q ss_pred             HHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccch----------------HHHHHHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEK----------------VQKELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----------------l~~~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      ++..++|.|++-.+..+...    ...++|++||+....-                ++|.+.+.+  ++|+.+++|+|++
T Consensus        68 l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik--~lhs~~IihRdLk  145 (369)
T KOG0665|consen   68 LMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILMELDHETISYILYQMLCGIK--HLHSAGIIHRDLK  145 (369)
T ss_pred             hhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHH--HHHhcceeecccC
Confidence            34567787776443333321    2244566666643211                223344555  8888877777555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                         |+||++..++.+|+.|||+|.......  ..+.++.+.. |.|||++.+    ..+...+||||+||++.||++|+.
T Consensus       146 ---Psnivv~~~~~lKi~dfg~ar~e~~~~--~mtpyVvtRy-yrapevil~----~~~ke~vdiwSvGci~gEli~~~V  215 (369)
T KOG0665|consen  146 ---PSNIVVNSDCTLKILDFGLARTEDTDF--MMTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGELILGTV  215 (369)
T ss_pred             ---cccceecchhheeeccchhhcccCccc--ccCchhheee-ccCchheec----cCCcccchhhhhhhHHHHHhhceE
Confidence               999999999999999999997755442  2555778888 999999999    779999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~  160 (182)
                      -|.| ....++..++..
T Consensus       216 lf~g-~d~idQ~~ki~~  231 (369)
T KOG0665|consen  216 LFPG-KDHIDQWNKIIE  231 (369)
T ss_pred             EecC-chHHHHHHHHHH
Confidence            9998 667778877765

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.82  E-value=1.4e-19  Score=135.27  Aligned_cols=143  Identities=16%  Similarity=0.128  Sum_probs=98.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++... +... +...+++++++. .+++.+.+..                  ....+||+.+++|   +|+
T Consensus        55 ~l~~~~h~~i~~~~-~~~~-~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H---~dl  128 (298)
T cd07841          55 LLQELKHPNIIGLL-DVFG-HKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH---RDL  128 (298)
T ss_pred             HHhhcCCCCChhhh-heee-cCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee---cCC
Confidence            56677777776543 3333 256788899988 6666554311                  0124777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |+|||.+.+   ...++.++|+||+||++|+|++|.+||
T Consensus       129 ~p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~il~e~~~g~~~~  203 (298)
T cd07841         129 KPNNLLIASDGVLKLADFGLARSFGSPNRK-MTHQVVTRW-YRAPELLFG---ARHYGVGVDMWSVGCIFAELLLRVPFL  203 (298)
T ss_pred             ChhhEEEcCCCCEEEccceeeeeccCCCcc-cccccccee-eeCHHHHhC---CCCCCcHHHHHHHHHHHHHHHcCCccc
Confidence            599999999999999999998765443221 111344566 999998754   135678999999999999999998888


Q ss_pred             CCCCCcHHHHHHH
Q psy17162        146 DTWGSPFEQLKQV  158 (182)
Q Consensus       146 ~~~~~~~~~~~~i  158 (182)
                      .+ ..+.+.+.++
T Consensus       204 ~~-~~~~~~~~~~  215 (298)
T cd07841         204 PG-DSDIDQLGKI  215 (298)
T ss_pred             cC-CccHHHHHHH
Confidence            77 3444444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.7e-19  Score=136.46  Aligned_cols=141  Identities=19%  Similarity=0.230  Sum_probs=94.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHH-----------------HHHHHHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQK-----------------ELETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~-----------------~l~~~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++.....+...    ....+++++++... .+.+                 .+.++  .++|..+++|+ 
T Consensus        66 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL--~~LH~~~i~H~-  141 (342)
T cd07879          66 TLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGL--KYIHSAGIIHR-  141 (342)
T ss_pred             HHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHH--HHHHHCCcccC-
Confidence            366778888876443332221    12345677776532 2222                 22333  48888876555 


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        |+||+||+++.++.++|+|||++......    .....++.. |+|||.+.+   ...++.++|+||+|+++|+|++|
T Consensus       142 --dlkp~NIll~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slGvil~el~~g  211 (342)
T cd07879         142 --DLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRW-YRAPEVILN---WMHYNQTVDIWSVGCIMAEMLTG  211 (342)
T ss_pred             --CCCHHHEEECCCCCEEEeeCCCCcCCCCC----CCCceeeec-ccChhhhcC---ccccCchHHHHHHHHHHHHHHhC
Confidence              45599999999999999999998764332    122455667 999998865   13467899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHH
Q psy17162        142 RFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i  158 (182)
                      +.||.+ ......+..+
T Consensus       212 ~~pf~~-~~~~~~~~~~  227 (342)
T cd07879         212 KTLFKG-KDYLDQLTQI  227 (342)
T ss_pred             CCCCCC-CCHHHHHHHH
Confidence            999987 3433444433

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.82  E-value=1.8e-19  Score=137.11  Aligned_cols=134  Identities=19%  Similarity=0.181  Sum_probs=91.7

Q ss_pred             HHHHhCCCCcEEEEEEeee---cCCCceEEEeccCccchHHHH------------------HHHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKT---TDDKKVVLVTGKGEAEKVQKE------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++........   .....+++++++... ++.+.                  +.++  .+||+.+++|+  
T Consensus        56 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL--~~LH~~~ivH~--  130 (336)
T cd07849          56 ILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGL--KYIHSANVLHR--  130 (336)
T ss_pred             HHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHhCCeecc--
Confidence            6677888777643322221   122456788887654 33332                  2333  47888766555  


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                       |+||+||+++.++.++|+|||++.........  ......++.. |+|||.+..   ...++.++|+||+|+++|+|++
T Consensus       131 -dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~DvwslGvil~el~~  205 (336)
T cd07849         131 -DLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRW-YRAPEIMLN---SKGYTKAIDIWSVGCILAEMLS  205 (336)
T ss_pred             -CCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCC-ccChHHhhC---CCCCCcHHHHHHHHHHHHHHHh
Confidence             55599999999999999999998765432211  0112456777 999998754   1457789999999999999999


Q ss_pred             CCCCCCC
Q psy17162        141 GRFPYDT  147 (182)
Q Consensus       141 g~~pf~~  147 (182)
                      |++||.+
T Consensus       206 G~~~f~~  212 (336)
T cd07849         206 NRPLFPG  212 (336)
T ss_pred             CCCCCCC
Confidence            9999976

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0666|consensus

Probab=99.82  E-value=5.6e-21  Score=138.84  Aligned_cols=133  Identities=17%  Similarity=0.124  Sum_probs=96.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH------------------------HHHHHHHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK------------------------ELETLRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------~l~~~~~~~l~~~~~~h   59 (182)
                      +++-+.|+|++- +..+.-..++.+.++++|.+. ++.+                        .|.++.  |||+.=+  
T Consensus        80 L~REl~h~nvi~-Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~--YLH~NWv--  153 (438)
T KOG0666|consen   80 LLRELKHPNVIS-LVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVH--YLHSNWV--  153 (438)
T ss_pred             HHHHhcCCcchh-HHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhH--HHhhhhe--
Confidence            566677877763 333333237888899988553 3333                        234444  6655544  


Q ss_pred             ccccCCCCCcEEEcCC----CeEEEeccCCCCCCCchhhhhc--ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQ----FLLHLFRFALSGNQDDLLIIRG--LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~----~~~kl~dfg~a~~~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                       .|||+||.||++..+    |.|||+|+|+++....+..+..  ...+-|.+ |+|||.+.+   ...|+.+.|+|+.||
T Consensus       154 -lHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiW-YRAPELLLG---a~hYT~AiDvWAiGC  228 (438)
T KOG0666|consen  154 -LHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIW-YRAPELLLG---ARHYTKAIDVWAIGC  228 (438)
T ss_pred             -eeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEE-ecChHHhcc---cccccchhhhHHHHH
Confidence             455566999999887    8999999999988776554322  22456778 999999997   357889999999999


Q ss_pred             HHHHHHhCCCCCCC
Q psy17162        134 SLIELATGRFPYDT  147 (182)
Q Consensus       134 ~l~~l~~g~~pf~~  147 (182)
                      ++.||+|-++.|.+
T Consensus       229 IfaElLtl~PlF~g  242 (438)
T KOG0666|consen  229 IFAELLTLEPLFKG  242 (438)
T ss_pred             HHHHHHccCccccc
Confidence            99999999999976

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.82  E-value=4.5e-19  Score=131.44  Aligned_cols=137  Identities=18%  Similarity=0.196  Sum_probs=96.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------H--HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------L--RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~--~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.+.|+|++..............++++++...+++.+++..                +  ...++|+.++   .|+|
T Consensus        58 ~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~d  134 (284)
T cd05038          58 EILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY---IHRD  134 (284)
T ss_pred             HHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe---ecCC
Confidence            35677888877654433333345567889999887777654321                0  1347777665   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh-h-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII-R-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.++|+|||.+......... . .....+... |++||....    ..++.++|+||+|+++|+|++|.
T Consensus       135 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~-~~~Pe~~~~----~~~~~~~Di~slG~~l~el~tg~  209 (284)
T cd05038         135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF-WYAPECLRT----SKFSSASDVWSFGVTLYELFTYG  209 (284)
T ss_pred             CCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCccc-ccCcHHHcc----CCCCcccchHHHhhhhheeeccC
Confidence            6699999999999999999998776532210 0 111122334 899999877    67888999999999999999999


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      .|+..
T Consensus       210 ~p~~~  214 (284)
T cd05038         210 DPSQS  214 (284)
T ss_pred             CCccc
Confidence            99865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.82  E-value=1.9e-19  Score=137.01  Aligned_cols=133  Identities=16%  Similarity=0.158  Sum_probs=92.4

Q ss_pred             HHHHhCCCCcEEEEEEeeec---CCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT---DDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~   61 (182)
                      +++.++|+|++.....+...   ....+++++++.. +++.+.                   +.++  .+||+.+++|  
T Consensus        57 ~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL--~~LH~~~i~H--  131 (337)
T cd07858          57 LLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGL--KYIHSANVLH--  131 (337)
T ss_pred             HHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHH--HHHHhCCEec--
Confidence            56778888776443322221   2245788888865 334332                   2333  3788776555  


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                       +|+||+||+++.++.+||+|||++......... .....++.. |+|||.+...   ..++.++|+||+||++|+|++|
T Consensus       132 -~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~---~~~~~~~DiwslG~il~~l~~g  205 (337)
T cd07858         132 -RDLKPSNLLLNANCDLKICDFGLARTTSEKGDF-MTEYVVTRW-YRAPELLLNC---SEYTTAIDVWSVGCIFAELLGR  205 (337)
T ss_pred             -CCCCHHHEEEcCCCCEEECcCccccccCCCccc-ccccccccC-ccChHHHhcC---CCCCCcccHHHHHHHHHHHHcC
Confidence             555699999999999999999998765433211 122456667 9999987641   3477899999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      ++||.+
T Consensus       206 ~~pf~~  211 (337)
T cd07858         206 KPLFPG  211 (337)
T ss_pred             CCCCCC
Confidence            999976

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.82  E-value=1.2e-19  Score=133.08  Aligned_cols=163  Identities=18%  Similarity=0.288  Sum_probs=112.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------------------H--HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------------------T--LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------------------~--~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++.. .+... +....++++++....++...+.                   .  ....++|+.+++|.  
T Consensus        55 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~--  130 (260)
T cd08222          55 LLSKLDHPAIVKF-HASFL-ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHR--  130 (260)
T ss_pred             HHHhCCCCcHHHH-HHHHh-cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCcccc--
Confidence            5666777777633 22222 3455778888877766654321                   0  12347777766555  


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                       +++|+||+++. +.++|+|||.+............ ..++.. |+|||.+..    ..++.++|+||+|+++|++++|.
T Consensus       131 -~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~-~~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~~~  202 (260)
T cd08222         131 -DLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATT-FTGTPY-YMSPEALKH----QGYDSKSDIWSLGCILYEMCCLA  202 (260)
T ss_pred             -CCChhheEeec-CCEeecccCceeecCCCcccccC-CCCCcC-ccCHHHHcc----CCCCchhhHHHHHHHHHHHHhCC
Confidence             55599999974 66999999988765443221112 456666 999999876    67788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ .........+..+..+.+ +..+++++.++++
T Consensus       203 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  238 (260)
T cd08222         203 HAFEG-QNFLSVVLRIVEGPTPSL-PETYSRQLNSIMQ  238 (260)
T ss_pred             CCCCC-ccHHHHHHHHHcCCCCCC-cchhcHHHHHHHH
Confidence            99987 345455555556655555 5567888888885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.82  E-value=6.5e-20  Score=127.22  Aligned_cols=84  Identities=24%  Similarity=0.271  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC
Q psy17162         41 QKELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS  120 (182)
Q Consensus        41 ~~~l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~  120 (182)
                      .+.+.++.  |+|+.+         ||+||+++.++.+|+  ||.+.......      ..+++. |+|||++.+    .
T Consensus        24 ~qi~~~L~--~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~------~~g~~~-y~aPE~~~~----~   79 (176)
T smart00750       24 LQCLRALR--ELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ------SRVDPY-FMAPEVIQG----Q   79 (176)
T ss_pred             HHHHHHHH--HHHhcC---------CcccEeEcCccceee--ccceEeecccc------CCCccc-ccChHHhcC----C
Confidence            34455555  888776         699999999999999  99886643321      356777 999999988    7


Q ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162        121 NYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus       121 ~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      .++.++||||+||++|+|++|..||...
T Consensus        80 ~~~~~~DiwSlG~il~elltg~~p~~~~  107 (176)
T smart00750       80 SYTEKADIYSLGITLYEALDYELPYNEE  107 (176)
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence            8889999999999999999999999763

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=1.4e-19  Score=142.71  Aligned_cols=133  Identities=15%  Similarity=0.053  Sum_probs=91.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++..+ ++.. .....++++++.. +++...+.                .  ..+.|||+.+++   |+|
T Consensus       212 ~iL~~L~HpnIv~l~-~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv---HrD  285 (461)
T PHA03211        212 RLLRRLSHPAVLALL-DVRV-VGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGII---HRD  285 (461)
T ss_pred             HHHHHCCCCCCCcEE-EEEE-ECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEE---ECc
Confidence            477888998887544 4433 3445666666553 33333221                0  113477776654   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |||+||+++.++.+||+|||+++....... .......|+.. |+|||++.+    ..++.++|+|||||++|+|++|..
T Consensus       286 LKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~-Y~APE~~~~----~~~~~~sDvwSlGviL~El~~g~~  360 (461)
T PHA03211        286 IKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVD-TNAPEVLAG----DPYTPSVDIWSAGLVIFEAAVHTA  360 (461)
T ss_pred             CCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcC-CcCHHHHcC----CCCCchHHHHHHHHHHHHHHHcCC
Confidence            669999999999999999999876533211 01122467888 999999987    778899999999999999999876


Q ss_pred             CCC
Q psy17162        144 PYD  146 (182)
Q Consensus       144 pf~  146 (182)
                      |+.
T Consensus       361 ~lf  363 (461)
T PHA03211        361 SLF  363 (461)
T ss_pred             Ccc
Confidence            543

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.82  E-value=7.1e-19  Score=133.72  Aligned_cols=144  Identities=16%  Similarity=0.164  Sum_probs=96.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.+... +...+++++|+..+ ++.+.+..                 ..+.+||..+++|   +|++
T Consensus        73 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H---~dl~  146 (335)
T PTZ00024         73 IMNEIKHENIMG-LVDVYV-EGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMH---RDLS  146 (335)
T ss_pred             HHHhCCCcceee-eeEEEe-cCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec---cccc
Confidence            567788877664 444444 45567888888753 45443211                 0124777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchh-------------hhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLL-------------IIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~-------------~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                      |+||+++.++.++|+|||.+.......             ........++.. |+|||.+.+   ...++.++|+||+||
T Consensus       147 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~  222 (335)
T PTZ00024        147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLW-YRAPELLMG---AEKYHFAVDMWSVGC  222 (335)
T ss_pred             HHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccC-CCCChhccc---CCCCCcHHHHHHHHH
Confidence            999999999999999999887654110             000111234566 999998865   134678999999999


Q ss_pred             HHHHHHhCCCCCCCCCCcHHHHHHH
Q psy17162        134 SLIELATGRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       134 ~l~~l~~g~~pf~~~~~~~~~~~~i  158 (182)
                      ++|+|++|.+||.+ ..+.+.+..+
T Consensus       223 ~l~el~tg~~p~~~-~~~~~~~~~i  246 (335)
T PTZ00024        223 IFAELLTGKPLFPG-ENEIDQLGRI  246 (335)
T ss_pred             HHHHHHhCCCCCCC-CCHHHHHHHH
Confidence            99999999999987 3444444443

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.81  E-value=2.4e-19  Score=132.61  Aligned_cols=164  Identities=15%  Similarity=0.248  Sum_probs=110.4

Q ss_pred             HHHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+. |+|++ .+.+... +...+++++++...+++.+.+...                 ...+||+.++.|   +|+
T Consensus        54 ~~~~l~~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H---~dl  128 (280)
T cd05581          54 VLTRLNGHPGII-KLYYTFQ-DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIH---RDL  128 (280)
T ss_pred             HHHhcccCCCch-hHHHHhc-CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee---cCC
Confidence            455566 55554 3333333 456788999999888877654211                 124777766555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh-------------------hhcccCCCCCCcccCccccCCCCCCCCCCccc
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI-------------------IRGLYGADCDPNFIRPERIDPSGNPSNYDIRS  126 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~-------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~  126 (182)
                      +|+||+++.++.++++|||.+........                   .......++.. |++||....    ...+.++
T Consensus       129 ~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Pe~~~~----~~~~~~~  203 (280)
T cd05581         129 KPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAE-YVSPELLNE----KPAGKSS  203 (280)
T ss_pred             CHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCcc-ccCHHHhCC----CCCChhh
Confidence            59999999999999999999876543221                   00111345566 999999877    6678899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        127 DVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       127 Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+||+|++++++++|..||.. .........+... ...+ +..+++.+.++++
T Consensus       204 Di~slG~~l~~l~~g~~p~~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~li~  254 (280)
T cd05581         204 DLWALGCIIYQMLTGKPPFRG-SNEYLTFQKILKL-EYSF-PPNFPPDAKDLIE  254 (280)
T ss_pred             hHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHhc-CCCC-CCccCHHHHHHHH
Confidence            999999999999999999987 3333333343332 2334 3456888888775

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.81  E-value=3.3e-19  Score=129.37  Aligned_cols=151  Identities=17%  Similarity=0.161  Sum_probs=101.5

Q ss_pred             CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcEE
Q psy17162          9 NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      .++|++ .+.+... +...+++++|+..++++.+.+..                 ....|+|..+++   |+|+||+||+
T Consensus        43 ~~~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~---H~dlkp~Nil  117 (237)
T cd05576          43 CVPNMV-CLHKYIV-SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIV---CRDLNPNNIL  117 (237)
T ss_pred             CCCcee-ehhhhee-cCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCee---ccCCCHHHEE
Confidence            344444 4444444 45678899999988887664311                 112477776654   5556699999


Q ss_pred             EcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCc
Q psy17162         72 QRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP  151 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~  151 (182)
                      ++.++.++++|||.+........    ...++.. |+|||.+..    ..++.++|+||+|+++|+|++|..|+..  .+
T Consensus       118 ~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~~~~~--~~  186 (237)
T cd05576         118 LDDRGHIQLTYFSRWSEVEDSCD----GEAVENM-YCAPEVGGI----SEETEACDWWSLGAILFELLTGKTLVEC--HP  186 (237)
T ss_pred             EcCCCCEEEecccchhccccccc----cCCcCcc-ccCCcccCC----CCCCchhhHHHHHHHHHHHHHCcchhhc--Cc
Confidence            99999999999998755443221    1344556 999998876    6778899999999999999999998865  22


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        152 FEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       152 ~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..    +.......+ |..+++.++++++
T Consensus       187 ~~----~~~~~~~~~-~~~~~~~~~~li~  210 (237)
T cd05576         187 SG----INTHTTLNI-PEWVSEEARSLLQ  210 (237)
T ss_pred             hh----cccccccCC-cccCCHHHHHHHH
Confidence            11    111111233 3457788888775

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.81  E-value=2.1e-19  Score=136.27  Aligned_cols=143  Identities=20%  Similarity=0.167  Sum_probs=98.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecC----CCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~   60 (182)
                      +++.++|+|++. +.++....    ...+++++++... ++.+.                   +.++  .+||+.+++|+
T Consensus        52 ~l~~l~~~~i~~-~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l--~~LH~~gi~H~  127 (330)
T cd07834          52 LLRHLRHENIIG-LLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGL--KYLHSANVIHR  127 (330)
T ss_pred             HHHhcCCcchhh-hhhhhcccCcccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHH--HHHHhCCeecC
Confidence            566777766653 33333322    2467888887663 44432                   2223  47887766555


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCC-CCCccchHHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPS-NYDIRSDVWSLGISLIE  137 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~-~~~~~~Diwslg~~l~~  137 (182)
                         |+||+||+++.++.++|+|||.+........  .......++.. |+|||.+.+    . .++.++|+||+|+++|+
T Consensus       128 ---dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~sDi~slG~il~~  199 (330)
T cd07834         128 ---DLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW-YRAPELLLS----SSRYTKAIDIWSVGCIFAE  199 (330)
T ss_pred             ---CCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccC-cCCceeeec----ccCCCcchhHHHHHHHHHH
Confidence               5559999999999999999999877554321  00122456677 999999987    4 67889999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      |++|.+||.+ ....+....+.
T Consensus       200 l~~g~~pf~~-~~~~~~~~~i~  220 (330)
T cd07834         200 LLTRKPLFPG-RDYIDQLNLIV  220 (330)
T ss_pred             HHcCCCCcCC-CCHHHHHHHHH
Confidence            9999999987 34444444443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.81  E-value=2.2e-19  Score=135.14  Aligned_cols=134  Identities=15%  Similarity=0.105  Sum_probs=94.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH------------------------HHHHHHHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK------------------------ELETLRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------~l~~~~~~~l~~~~~~h   59 (182)
                      +++.++|+|++.....+.......+++++|+... ++.+                        .+.++  .|||+.+++ 
T Consensus        55 ~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~~i~-  130 (316)
T cd07842          55 LLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGV--HYLHSNWVL-  130 (316)
T ss_pred             HHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHH--HHHHhCCEe-
Confidence            6777888888765555544434678899988653 2221                        12233  377777655 


Q ss_pred             ccccCCCCCcEEEcC----CCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRL----QFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        60 ~~~~~lk~~nil~~~----~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                        |+|+||+||+++.    ++.+||+|||++.........  ......++.. |+|||.+.+   ...++.++|+||+|+
T Consensus       131 --h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~  204 (316)
T cd07842         131 --HRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIW-YRAPELLLG---ARHYTKAIDIWAIGC  204 (316)
T ss_pred             --eCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCcccccc-ccCHHHHhC---CCCCCcHHHHHHHHH
Confidence              4566699999999    899999999998765433220  1112355667 999998765   134678999999999


Q ss_pred             HHHHHHhCCCCCCC
Q psy17162        134 SLIELATGRFPYDT  147 (182)
Q Consensus       134 ~l~~l~~g~~pf~~  147 (182)
                      ++|+|++|.+||.+
T Consensus       205 ~l~~l~~~~~~~~~  218 (316)
T cd07842         205 IFAELLTLEPIFKG  218 (316)
T ss_pred             HHHHHHhcCCCCcC
Confidence            99999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.81  E-value=6e-19  Score=130.91  Aligned_cols=140  Identities=18%  Similarity=0.158  Sum_probs=94.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH---------------------HHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL---------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|++++.. .+... +....++++++.. ..+.+.+                     .+  ..|||+.+++|+  
T Consensus        51 ~l~~l~~~~iv~~-~~~~~-~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~--L~~lH~~~~~H~--  123 (283)
T cd07835          51 LLKELNHPNIVRL-LDVVH-SENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQG--IAYCHSHRVLHR--  123 (283)
T ss_pred             HHHhcCCCCccCH-hheec-cCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHH--HHHHHHCCeeCC--
Confidence            5667777776543 33333 4466778888764 3343322                     22  247887766555  


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                       |++|+||+++.++.++|+|||.+......... .....++.. |+|||.+..   ...++.++|+||+|+++|+|++|+
T Consensus       124 -dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g~  197 (283)
T cd07835         124 -DLKPQNLLIDREGALKLADFGLARAFGVPVRT-YTHEVVTLW-YRAPEILLG---SRQYSTPVDIWSIGCIFAEMVNRR  197 (283)
T ss_pred             -CCCHHHEEEcCCCcEEEeecccccccCCCccc-cCccccccC-CCCCceeec---CcccCcHHHHHHHHHHHHHHHhCC
Confidence             55599999999999999999998654332211 111344566 999998765   134678899999999999999999


Q ss_pred             CCCCCCCCcHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQ  157 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~  157 (182)
                      +||.+ ..+......
T Consensus       198 ~pf~~-~~~~~~~~~  211 (283)
T cd07835         198 PLFPG-DSEIDQLFR  211 (283)
T ss_pred             CCCCC-CCHHHHHHH
Confidence            99987 344343333

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.81  E-value=1.6e-19  Score=132.13  Aligned_cols=134  Identities=22%  Similarity=0.272  Sum_probs=98.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.++.. +...+++++++...+++.+.+..                 ..+.+||+.++.   |+|+
T Consensus        50 ~~~~~l~~~~i~-~~~~~~~-~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~---H~di  124 (260)
T PF00069_consen   50 KILRRLRHPNIV-QILDVFQ-DDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIV---HRDI  124 (260)
T ss_dssp             HHHHHHTBTTBC-HEEEEEE-ESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEE---ESSB
T ss_pred             hccccccccccc-ccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc---cccc
Confidence            366777787775 4444444 26777899999888887765431                 112466666554   5555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccC-CCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERID-PSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~-~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.++|+|||.+......... .....++.. |+|||+.. .    ...+.++|+||+|+++|+|++|..|
T Consensus       125 kp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~~~~p  198 (260)
T PF00069_consen  125 KPENILLDENGEVKLIDFGSSVKLSENNEN-FNPFVGTPE-YMAPEVLQQG----KKYTRKSDIWSLGIILYELLTGKLP  198 (260)
T ss_dssp             SGGGEEESTTSEEEESSGTTTEESTSTTSE-BSSSSSSGG-GSCHHHHTTT----SSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred             cccccccccccccccccccccccccccccc-ccccccccc-cccccccccc----ccccccccccccccccccccccccc
Confidence            599999999999999999998643221111 222556677 99999988 5    6778999999999999999999999


Q ss_pred             CCC
Q psy17162        145 YDT  147 (182)
Q Consensus       145 f~~  147 (182)
                      |..
T Consensus       199 ~~~  201 (260)
T PF00069_consen  199 FEE  201 (260)
T ss_dssp             STT
T ss_pred             ccc
Confidence            987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.81  E-value=6.3e-19  Score=134.67  Aligned_cols=130  Identities=20%  Similarity=0.240  Sum_probs=89.7

Q ss_pred             HHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHH------------------HHHHHHHHHHhhcchhccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQK------------------ELETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~------------------~l~~~~~~~l~~~~~~h~~   61 (182)
                      +++.++|+|++.....+...    ....+++++++. .+++.+                  .+.++  .|||+.+++|+ 
T Consensus        69 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL--~~LH~~~ivH~-  144 (345)
T cd07877          69 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGL--KYIHSADIIHR-  144 (345)
T ss_pred             HHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeeec-
Confidence            57778888876544333221    123456666653 233322                  22333  48887766555 


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        |+||+||+++.++.++|+|||++......    .....++.. |+|||.+.+   ...++.++|+||+||++|+|++|
T Consensus       145 --dlkp~NIll~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~-y~aPE~~~~---~~~~~~~~DvwslG~il~el~~g  214 (345)
T cd07877         145 --DLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW-YRAPEIMLN---WMHYNQTVDIWSVGCIMAELLTG  214 (345)
T ss_pred             --CCChHHEEEcCCCCEEEeccccccccccc----ccccccCCC-ccCHHHHhC---ccCCCchhhHHHHHHHHHHHHhC
Confidence              55599999999999999999998764332    122456667 999998764   13567889999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      .+||.+
T Consensus       215 ~~pf~~  220 (345)
T cd07877         215 RTLFPG  220 (345)
T ss_pred             CCCCCC
Confidence            999976

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.81  E-value=3.8e-19  Score=133.53  Aligned_cols=143  Identities=18%  Similarity=0.179  Sum_probs=94.1

Q ss_pred             HHHHhCCCCcEEEEEEeeec------CCCceEEEeccCccchHHH--------------------HHHHHHHHHHhhcch
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT------DDKKVVLVTGKGEAEKVQK--------------------ELETLRCIYIQDYHL   57 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~--------------------~l~~~~~~~l~~~~~   57 (182)
                      +++.++|+|++.........      +...+++++++... ++..                    .+.++  .|||+.++
T Consensus        60 ~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al--~~lH~~~i  136 (311)
T cd07866          60 ILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGI--NYLHENHI  136 (311)
T ss_pred             HHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHH--HHHHhCCe
Confidence            67778888776433222221      23346788877543 2221                    12333  48888776


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh----------hcccCCCCCCcccCccccCCCCCCCCCCccch
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII----------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSD  127 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~----------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~D  127 (182)
                      +|   +|+||+||+++.++.++|+|||++.........          ..+...++.. |+|||.+.+   ...++.++|
T Consensus       137 ~H---~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~D  209 (311)
T cd07866         137 LH---RDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRW-YRPPELLLG---ERRYTTAVD  209 (311)
T ss_pred             ec---CCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccC-cCChHHhhC---CCccCchhH
Confidence            55   455599999999999999999998764332110          0111244666 999998765   135678999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCcHHHHHH
Q psy17162        128 VWSLGISLIELATGRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       128 iwslg~~l~~l~~g~~pf~~~~~~~~~~~~  157 (182)
                      +||+|+++|+|++|++||.+ .........
T Consensus       210 v~slG~il~el~~g~~~~~~-~~~~~~~~~  238 (311)
T cd07866         210 IWGIGCVFAEMFTRRPILQG-KSDIDQLHL  238 (311)
T ss_pred             hHHHHHHHHHHHhCCCCCCC-CCHHHHHHH
Confidence            99999999999999999987 344344433

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.81  E-value=1.1e-18  Score=129.57  Aligned_cols=141  Identities=18%  Similarity=0.191  Sum_probs=96.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH----------------------HHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE----------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------l~~~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++ .+.+... +...+++++++..+ ++.+.                      +.+  ..++|+.+++| 
T Consensus        50 ~~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~--l~~lH~~~i~h-  123 (284)
T cd07836          50 SLMKELKHENIV-RLHDVIH-TENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKG--IAFCHENRVLH-  123 (284)
T ss_pred             HHHHhhcCCCEe-eeeeeEe-eCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHH--HHHHHHCCeee-
Confidence            467778877665 4444444 34567888888764 43332                      122  34788776555 


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                        +|++|+||+++.++.++|+|||.+......... .....++.. |++||.+.+   ...++.++|+||+|+++|++++
T Consensus       124 --~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-y~~PE~~~~---~~~~~~~~Dv~slG~~l~~l~~  196 (284)
T cd07836         124 --RDLKPQNLLINKRGELKLADFGLARAFGIPVNT-FSNEVVTLW-YRAPDVLLG---SRTYSTSIDIWSVGCIMAEMIT  196 (284)
T ss_pred             --CCCCHHHEEECCCCcEEEeecchhhhhcCCccc-ccccccccc-ccChHHhcC---CCCCCcHHHHHHHHHHHHHHHh
Confidence              455599999999999999999988654332111 111345666 999998765   1346789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHH
Q psy17162        141 GRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~  157 (182)
                      |++||.+ ....+....
T Consensus       197 g~~~~~~-~~~~~~~~~  212 (284)
T cd07836         197 GRPLFPG-TNNEDQLLK  212 (284)
T ss_pred             CCCCCCC-CCcHHHHHH
Confidence            9999987 344444443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=2.3e-19  Score=137.71  Aligned_cols=131  Identities=13%  Similarity=0.077  Sum_probs=90.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .+... +....++++++... ++.+.+.                .  .++.|||+.+++|   +|+
T Consensus       110 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH---rDl  183 (357)
T PHA03209        110 LLQNVNHPSVIRM-KDTLV-SGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIH---RDV  183 (357)
T ss_pred             HHHhCCCCCCcCh-hheEE-eCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec---CCC
Confidence            6778888887644 33333 33456677766532 3333221                0  1234788776554   556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG-RFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g-~~p  144 (182)
                      ||+||+++.++.+||+|||.+........  .....|+.. |+|||++..    ..++.++|+||+||++|+|+++ +++
T Consensus       184 kp~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        184 KTENIFINDVDQVCIGDLGAAQFPVVAPA--FLGLAGTVE-TNAPEVLAR----DKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CHHHEEECCCCCEEEecCccccccccCcc--ccccccccc-ccCCeecCC----CCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            69999999999999999999865332221  222567777 999999987    7789999999999999999985 455


Q ss_pred             CCC
Q psy17162        145 YDT  147 (182)
Q Consensus       145 f~~  147 (182)
                      |..
T Consensus       257 f~~  259 (357)
T PHA03209        257 FED  259 (357)
T ss_pred             ccC
Confidence            443

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.80  E-value=1.2e-18  Score=132.37  Aligned_cols=91  Identities=19%  Similarity=0.155  Sum_probs=70.0

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccc
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRS  126 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~  126 (182)
                      .|||..+++|   +|+||+||+++.++.++|+|||.+.........   ......++.. |+|||.+.+   ...++.++
T Consensus       119 ~~LH~~givH---~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~-y~aPE~~~~---~~~~~~~~  191 (332)
T cd07857         119 KYIHSANVLH---RDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRW-YRAPEIMLS---FQSYTKAI  191 (332)
T ss_pred             HHHHhCCccc---CCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCcc-ccCcHHHhC---CCCCCcHH
Confidence            3888776655   555599999999999999999998765432210   0122467777 999998764   13577899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCC
Q psy17162        127 DVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       127 Diwslg~~l~~l~~g~~pf~~  147 (182)
                      |+||+|+++|++++|.+||.+
T Consensus       192 Di~slGv~l~~l~~g~~pf~~  212 (332)
T cd07857         192 DVWSVGCILAELLGRKPVFKG  212 (332)
T ss_pred             HHHHHHHHHHHHHhCCcCCCC
Confidence            999999999999999999986

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.80  E-value=1.5e-18  Score=130.29  Aligned_cols=134  Identities=17%  Similarity=0.120  Sum_probs=91.5

Q ss_pred             HHHHhCCCCcEEEEEEeeec------CCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcch
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT------DDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHL   57 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~   57 (182)
                      +++.+.|++++.........      .....++++|+... ++.+.                    +.++  .|||+.++
T Consensus        64 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al--~~lH~~~i  140 (310)
T cd07865          64 ILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGL--YYIHRNKI  140 (310)
T ss_pred             HHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHH--HHHHHCCe
Confidence            56778888876544332221      12345788888653 33221                    2223  48887765


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +|+   |++|+||+++.++.+||+|||.+.........   ......++.. |+|||.+.+   ...++.++|+||+|++
T Consensus       141 ~H~---dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slG~~  213 (310)
T cd07865         141 LHR---DMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLW-YRPPELLLG---ERDYGPPIDMWGAGCI  213 (310)
T ss_pred             ecc---CCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCcc-ccCcHHhcC---CcccCchhhhHHHHHH
Confidence            555   55599999999999999999998765432210   0112345666 999998765   1246788999999999


Q ss_pred             HHHHHhCCCCCCC
Q psy17162        135 LIELATGRFPYDT  147 (182)
Q Consensus       135 l~~l~~g~~pf~~  147 (182)
                      +|+|++|.+||.+
T Consensus       214 l~el~t~~~~~~~  226 (310)
T cd07865         214 MAEMWTRSPIMQG  226 (310)
T ss_pred             HHHHHhCCCCCCC
Confidence            9999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.80  E-value=4.1e-19  Score=131.59  Aligned_cols=142  Identities=18%  Similarity=0.169  Sum_probs=96.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------H--HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------L--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~--~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|++++. +.+... +...+++++++... ++.+.+..                +  ...+||..+++|   +|+
T Consensus        51 ~l~~l~~~~i~~-~~~~~~-~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H---~dl  124 (283)
T cd05118          51 LLKELNHPNIIK-LLDVFR-HKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILH---RDL  124 (283)
T ss_pred             HHHHhcCCCcch-HHHhhc-cCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeee---cCc
Confidence            566777766653 333333 44667888888664 44443211                0  124777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC-CCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS-NYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~-~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +|+||+++.++.++|+|||.+......... .....++.. |+|||.+.+    . .++.++|+||+|+++|+|++|+.|
T Consensus       125 ~p~nili~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~-~~~PE~~~~----~~~~~~~~Di~slG~~l~~l~tg~~~  198 (283)
T cd05118         125 KPENLLINTEGVLKLADFGLARSFGSPVRP-YTHYVVTRW-YRAPELLLG----DKGYSTPVDIWSVGCIFAELLSRRPL  198 (283)
T ss_pred             CHHHEEECCCCcEEEeeeeeeEecCCCccc-ccCccCccc-ccCcHHHhc----CCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999988766543311 122345566 999999876    3 677899999999999999999999


Q ss_pred             CCCCCCcHHHHHHH
Q psy17162        145 YDTWGSPFEQLKQV  158 (182)
Q Consensus       145 f~~~~~~~~~~~~i  158 (182)
                      |.+ ....+.+..+
T Consensus       199 ~~~-~~~~~~~~~~  211 (283)
T cd05118         199 FPG-KSEIDQLFKI  211 (283)
T ss_pred             CCC-CCHHHHHHHH
Confidence            987 3444444443

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.80  E-value=1.5e-18  Score=128.83  Aligned_cols=99  Identities=17%  Similarity=0.158  Sum_probs=75.9

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .+||..+++|   ++++|+||+++.++.++|+|||.+........  .....++.. |+|||.+.+    ..++.++|+|
T Consensus       121 ~~LH~~~i~h---~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~-~~~PE~~~~----~~~~~~~Di~  190 (287)
T cd07838         121 DFLHSHRIVH---RDLKPQNILVTSDGQVKIADFGLARIYSFEMA--LTSVVVTLW-YRAPEVLLQ----SSYATPVDMW  190 (287)
T ss_pred             HHHHHCCeee---ccCChhhEEEccCCCEEEeccCcceeccCCcc--ccccccccc-ccChHHhcc----CCCCCcchhh
Confidence            4788776555   55559999999999999999999877644322  111345666 999999987    6788899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      |+||++|+|++|.+||.+ ....+...++.
T Consensus       191 s~G~~l~~l~~~~~~~~~-~~~~~~~~~~~  219 (287)
T cd07838         191 SVGCIFAELFRRRPLFRG-TSEADQLDKIF  219 (287)
T ss_pred             hHHHHHHHHHhCCCcccC-CChHHHHHHHH
Confidence            999999999999999987 44445554443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG2052|consensus

Probab=99.80  E-value=3.4e-19  Score=134.58  Aligned_cols=167  Identities=19%  Similarity=0.213  Sum_probs=113.3

Q ss_pred             HhCCCCcEEEEE-Eeeec-CCCceEEEeccCccchHHHHHHH----------------HHHHHHhhc-----chhccccc
Q psy17162          7 VFNQDEIGVTVS-SVKTT-DDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDY-----HLCVRSTR   63 (182)
Q Consensus         7 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~-----~~~h~~~~   63 (182)
                      .++|.|++-.+. |.... +-.+++++++|.+.++|.++|..                ..+++||..     +.-.+.||
T Consensus       261 mLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR  340 (513)
T KOG2052|consen  261 MLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR  340 (513)
T ss_pred             HhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence            467888875443 44332 22567799999999999998732                112345431     22236799


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCch---hhhhcccCCCCCCcccCccccCCCCCCCCCC--ccchHHHHHHHHHHH
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDL---LIIRGLYGADCDPNFIRPERIDPSGNPSNYD--IRSDVWSLGISLIEL  138 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~---~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~--~~~Diwslg~~l~~l  138 (182)
                      |+|++|||+..++.+-|+|+|+|-.....   ........+||.. |||||++....+..-+.  ..+||||||.++||+
T Consensus       341 DlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKR-YMAPEvLdetin~~~Fesyk~ADIYafgLVlWEi  419 (513)
T KOG2052|consen  341 DLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKR-YMAPEVLDETINMKHFESYKRADIYAFGLVLWEI  419 (513)
T ss_pred             ccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceee-ccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999998654332   1222334789999 99999998643332333  458999999999998


Q ss_pred             Hh----------CCCCCCC---CCCcHHHHHHH--hhCCCCCCCCCCCCHH
Q psy17162        139 AT----------GRFPYDT---WGSPFEQLKQV--VQDDPPRLPPGEFSSD  174 (182)
Q Consensus       139 ~~----------g~~pf~~---~~~~~~~~~~i--~~~~~~~~~~~~~s~~  174 (182)
                      ..          -++||.+   .+...+.+.++  .+..+|.+|+.+-|.+
T Consensus       420 arRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~  470 (513)
T KOG2052|consen  420 ARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDP  470 (513)
T ss_pred             HHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCH
Confidence            74          2578865   23456666665  3567788865554533

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.80  E-value=4.3e-19  Score=134.92  Aligned_cols=134  Identities=19%  Similarity=0.189  Sum_probs=92.9

Q ss_pred             hHHHHhCCCCcEEEEEEeee---cCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT---TDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++.. .++..   .....+++++++.. +++.+.                   +.++  .|||..+++| 
T Consensus        56 ~~l~~l~h~~iv~~-~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH-  130 (334)
T cd07855          56 KILRHFKHDNIIAI-RDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGL--KYIHSANVIH-  130 (334)
T ss_pred             HHHHhcCCCCccCH-HHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHH--HHHHHCCeec-
Confidence            36777888776532 22222   23456778888864 344432                   2223  4788776555 


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh---cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR---GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                        +|+||+||+++.++.+||+|||.+..........   .....++.. |+|||.+..   ...++.++|+||+|+++|+
T Consensus       131 --~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~-y~~PE~~~~---~~~~~~~~Di~slG~~l~e  204 (334)
T cd07855         131 --RDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRW-YRAPELLLS---LPEYTTAIDMWSVGCIFAE  204 (334)
T ss_pred             --CCCCHHHEEEcCCCcEEecccccceeecccCcCCCccccccccccc-ccChHHhcC---CcccccccchHHHHHHHHH
Confidence              5566999999999999999999987654322110   112456677 999998764   1347789999999999999


Q ss_pred             HHhCCCCCCC
Q psy17162        138 LATGRFPYDT  147 (182)
Q Consensus       138 l~~g~~pf~~  147 (182)
                      |++|.+||.+
T Consensus       205 l~~g~~pf~~  214 (334)
T cd07855         205 MLGRRQLFPG  214 (334)
T ss_pred             HHcCCCccCC
Confidence            9999999987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0669|consensus

Probab=99.80  E-value=4.6e-19  Score=125.72  Aligned_cols=148  Identities=17%  Similarity=0.166  Sum_probs=100.8

Q ss_pred             HHHHhCCCCcEEEEEEee------ecCCCceEEEeccCcc---------------chHHHHHHHHH--HHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVK------TTDDKKVVLVTGKGEA---------------EKVQKELETLR--CIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---------------~~l~~~l~~~~--~~~l~~~~~~h~   60 (182)
                      ||..++|.|.+..+.-+.      ..+...+|+|++.++.               ..+.+.+.++.  +.|+|...++|+
T Consensus        69 iL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHR  148 (376)
T KOG0669|consen   69 ILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHR  148 (376)
T ss_pred             HHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence            677788877763222111      1133457777766432               11222222221  347777766665


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchh---hhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLL---IIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~---~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      |   +|+.|+|++.+|.+||+|||+++.+..+.   ..+.+..+.+.+ |++||.+.+   ...|+++.|+|..||++.+
T Consensus       149 D---mKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLw-YrppEllLG---~r~yg~~iDiWgAgCimae  221 (376)
T KOG0669|consen  149 D---MKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLW-YRPPELLLG---DREYGPPIDIWGAGCIMAE  221 (376)
T ss_pred             c---ccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeee-cCCHHHhhc---ccccCCcchhHhHHHHHHH
Confidence            5   55999999999999999999997654332   223444566888 999999998   3678899999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      |++|.+-+++ +...+++..|.
T Consensus       222 Mwtrspimqg-nteqqql~~Is  242 (376)
T KOG0669|consen  222 MWTRSPIMQG-NTEQQQLHLIS  242 (376)
T ss_pred             HHccCccccC-ChHHHHHHHHH
Confidence            9999999998 55556665553

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.79  E-value=1.1e-18  Score=133.12  Aligned_cols=143  Identities=20%  Similarity=0.243  Sum_probs=91.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC------------CCceEEEeccCccchHHHH------------------HHHHHHHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD------------DKKVVLVTGKGEAEKVQKE------------------LETLRCIYI   52 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~------------------l~~~~~~~l   52 (182)
                      ++++.++|+|++.....+....            ...+++++++... ++.+.                  +.++  .||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL--~~L  130 (342)
T cd07854          54 KIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGL--KYI  130 (342)
T ss_pred             HHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHH--HHH
Confidence            3577788877664332222211            1246688888763 44432                  2333  478


Q ss_pred             hhcchhcccccCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         53 QDYHLCVRSTRYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        53 ~~~~~~h~~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |..+++|   +|+||+||+++. ++.++++|||.+..........  .....++.. |+|||.+..   ...++.++|+|
T Consensus       131 H~~givH---~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Diw  203 (342)
T cd07854         131 HSANVLH---RDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKW-YRSPRLLLS---PNNYTKAIDMW  203 (342)
T ss_pred             HhCCccc---CCCCHHHEEEcCCCceEEECCcccceecCCcccccccccccccccc-ccCHHHHhC---ccccCchhhHH
Confidence            8776555   555599999975 4678999999986543221100  111345667 999998754   13567899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHH
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLK  156 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~  156 (182)
                      |+||++|+|++|..||.+. .+.+...
T Consensus       204 SlGvil~el~~g~~pf~~~-~~~~~~~  229 (342)
T cd07854         204 AAGCIFAEMLTGKPLFAGA-HELEQMQ  229 (342)
T ss_pred             HHHHHHHHHHhCCCCCCCC-CHHHHHH
Confidence            9999999999999999873 3333333

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.79  E-value=1.9e-18  Score=131.87  Aligned_cols=131  Identities=18%  Similarity=0.199  Sum_probs=90.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCC----CceEEEeccCccchHHHH------------------HHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDD----KKVVLVTGKGEAEKVQKE------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~------------------l~~~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++.....+.....    ..+++++++. +.++.+.                  +.++  .+||..+++  
T Consensus        66 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al--~~LH~~gi~--  140 (343)
T cd07880          66 RLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGL--KYIHAAGII--  140 (343)
T ss_pred             HHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHhCCee--
Confidence            36777888887644333222111    2456788775 3344332                  2233  477777655  


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                       |+|+||+||+++.++.++|+|||.+.......    ....++.. |++||.+..   ...++.++|+||+|+++|++++
T Consensus       141 -H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~  211 (343)
T cd07880         141 -HRDLKPGNLAVNEDCELKILDFGLARQTDSEM----TGYVVTRW-YRAPEVILN---WMHYTQTVDIWSVGCIMAEMLT  211 (343)
T ss_pred             -cCCCCHHHEEEcCCCCEEEeecccccccccCc----cccccCCc-ccCHHHHhC---CCCCCcHHHHHHHHHHHHHHHh
Confidence             45555999999999999999999987654322    22455667 999998865   1346788999999999999999


Q ss_pred             CCCCCCC
Q psy17162        141 GRFPYDT  147 (182)
Q Consensus       141 g~~pf~~  147 (182)
                      |.+||.+
T Consensus       212 g~~pf~~  218 (343)
T cd07880         212 GKPLFKG  218 (343)
T ss_pred             CCCCCCC
Confidence            9999987

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.79  E-value=3.9e-18  Score=129.46  Aligned_cols=130  Identities=18%  Similarity=0.239  Sum_probs=93.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH------------------HHHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL------------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +.+....+....++++++.. .++.+.+                  .++  .+||..+++|++   
T Consensus        61 ~~l~~l~hpniv~-~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL--~~LH~~~iiH~d---  133 (328)
T cd07856          61 KLLKHLRHENIIS-LSDIFISPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGL--KYVHSAGVVHRD---  133 (328)
T ss_pred             HHHHhcCCCCeee-EeeeEecCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHhCCcccCC---
Confidence            3677888887765 44444445566788888763 3443322                  223  478887766555   


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||.+.......    ....++.. |+|||.+..   ...++.++|+||+|+++|+|++|++|
T Consensus       134 l~p~Nili~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~-y~aPE~~~~---~~~~~~~~Dv~slG~il~el~tg~~~  205 (328)
T cd07856         134 LKPSNILINENCDLKICDFGLARIQDPQM----TGYVSTRY-YRAPEIMLT---WQKYDVEVDIWSAGCIFAEMLEGKPL  205 (328)
T ss_pred             CCHHHEeECCCCCEEeCccccccccCCCc----CCCccccc-ccCceeeec---cCCcCcHHHHHHHHHHHHHHHhCCCC
Confidence            55999999999999999999886543221    12445666 999998754   13567899999999999999999999


Q ss_pred             CCC
Q psy17162        145 YDT  147 (182)
Q Consensus       145 f~~  147 (182)
                      |.+
T Consensus       206 f~~  208 (328)
T cd07856         206 FPG  208 (328)
T ss_pred             CCC
Confidence            976

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1024|consensus

Probab=99.79  E-value=2e-18  Score=129.08  Aligned_cols=123  Identities=20%  Similarity=0.203  Sum_probs=96.0

Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .++||.++++|.|+   ..+|++++....+||+|=.+++.+-.....+....-..+.+||++|.+..    ..|+.++|+
T Consensus       409 m~hlh~~~ViHkDi---AaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n----~~yssasDv  481 (563)
T KOG1024|consen  409 MEHLHNHGVIHKDI---AARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN----SHYSSASDV  481 (563)
T ss_pred             HHHHHhcCcccchh---hhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh----hhhcchhhh
Confidence            46788877666554   49999999999999999998877644433222223334456999999998    899999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||||+++|||+| |+.|+.. .+|.+....+..|.+--. |.++|+++..++.
T Consensus       482 WsfGVllWELmtlg~~Pyae-IDPfEm~~ylkdGyRlaQ-P~NCPDeLf~vMa  532 (563)
T KOG1024|consen  482 WSFGVLLWELMTLGKLPYAE-IDPFEMEHYLKDGYRLAQ-PFNCPDELFTVMA  532 (563)
T ss_pred             HHHHHHHHHHHhcCCCCccc-cCHHHHHHHHhccceecC-CCCCcHHHHHHHH
Confidence            999999999998 9999988 688887777777875544 6678999887664

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.79  E-value=7.2e-19  Score=134.23  Aligned_cols=140  Identities=22%  Similarity=0.290  Sum_probs=94.3

Q ss_pred             HHHHhCCCCcEEEEEEeeec-----CCCceEEEeccCccchHHHH------------------HHHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT-----DDKKVVLVTGKGEAEKVQKE------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~------------------l~~~~~~~l~~~~~~h~   60 (182)
                      +++.+.|+|++... +....     ....+++++++.. .++.+.                  +.++  .++|+.+++  
T Consensus        67 ~l~~l~h~~iv~~~-~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~ql~~aL--~~LH~~gi~--  140 (343)
T cd07851          67 LLKHMDHENVIGLL-DVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKCQKLSDDHIQFLVYQILRGL--KYIHSAGII--  140 (343)
T ss_pred             HHHhccCCCHHHHH-HHhhccccccccccEEEEEecCC-CCHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCee--
Confidence            56667777765322 22211     1124678888763 344432                  2222  477776655  


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                       |+|++|+||+++.++.++|+|||.+.......    ....++.. |+|||.+..   ...++.++|+||+|+++|++++
T Consensus       141 -H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----~~~~~~~~-y~aPE~~~~---~~~~~~~~DvwslGv~l~ellt  211 (343)
T cd07851         141 -HRDLKPSNIAVNEDCELKILDFGLARHTDDEM----TGYVATRW-YRAPEIMLN---WMHYNQTVDIWSVGCIMAELLT  211 (343)
T ss_pred             -cCCCCHHHeEECCCCCEEEccccccccccccc----cCCccccc-ccCHHHHhC---CCCCCchHhHHHHHHHHHHHHh
Confidence             55566999999999999999999987654432    22456667 999998864   1356789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHh
Q psy17162        141 GRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~  159 (182)
                      |..||.+ ......+..+.
T Consensus       212 g~~pf~~-~~~~~~~~~i~  229 (343)
T cd07851         212 GKTLFPG-SDHIDQLKRIM  229 (343)
T ss_pred             CCCCCCC-CChHHHHHHHH
Confidence            9999987 34444444443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.78  E-value=2.3e-18  Score=127.73  Aligned_cols=140  Identities=16%  Similarity=0.153  Sum_probs=94.3

Q ss_pred             HHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------H--HHHHHhhcchhcccccC
Q psy17162          5 RAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------L--RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         5 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~--~~~~l~~~~~~h~~~~~   64 (182)
                      ++.+. |+|++ .+.+... +....++++++. .+++.+.+..                 +  ...|||+.+++|   +|
T Consensus        51 l~~~~~h~~i~-~~~~~~~-~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H---~d  124 (283)
T cd07830          51 LRKLNEHPNIV-KLKEVFR-ENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFH---RD  124 (283)
T ss_pred             HHhccCCCCch-hHHHHhh-cCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCccc---CC
Confidence            44555 55554 3333333 356678888887 5555543311                 1  124777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ++|+||+++.++.++|+|||.+........  .....++.. |+|||.+..   ...++.++|+||+|+++++|++|++|
T Consensus       125 l~~~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~-~~aPE~~~~---~~~~~~~~Di~s~G~~l~el~~g~~~  198 (283)
T cd07830         125 LKPENLLVSGPEVVKIADFGLAREIRSRPP--YTDYVSTRW-YRAPEILLR---STSYSSPVDIWALGCIMAELYTLRPL  198 (283)
T ss_pred             CChhhEEEcCCCCEEEeecccceeccCCCC--cCCCCCccc-ccCceeeec---CcCcCCccchhhHHHHHHHHHhCCCc
Confidence            559999999999999999999876543322  222446667 999998754   14567899999999999999999999


Q ss_pred             CCCCCCcHHHHHH
Q psy17162        145 YDTWGSPFEQLKQ  157 (182)
Q Consensus       145 f~~~~~~~~~~~~  157 (182)
                      |.+ ....+...+
T Consensus       199 ~~~-~~~~~~~~~  210 (283)
T cd07830         199 FPG-SSEIDQLYK  210 (283)
T ss_pred             cCC-CChHHHHHH
Confidence            987 344344433

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.78  E-value=3.2e-18  Score=128.91  Aligned_cols=136  Identities=18%  Similarity=0.144  Sum_probs=93.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++... +... +....++++++...+++.+.+..                   ....|||+.+++|   +|
T Consensus        52 ~l~~l~h~~i~~~~-~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH---~d  126 (314)
T cd08216          52 TSRQLQHPNILPYV-TSFI-VDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIH---RS  126 (314)
T ss_pred             HHHhcCCcchhhhh-heee-cCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec---CC
Confidence            56678887776543 3333 45567888888776665543211                   0134777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh------hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI------IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +||+||+++.++.++++|||.+........      .......++.. |+|||.+....  ..++.++|+||+||++|+|
T Consensus       127 lk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~--~~~~~~~Diws~G~il~el  203 (314)
T cd08216         127 VKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLP-WLSPEVLQQNL--QGYNEKSDIYSVGITACEL  203 (314)
T ss_pred             CCcceEEEecCCceEEecCccceeecccccccccccccccccccccc-ccCHHHhcCCC--CCCCcchhHHHHHHHHHHH
Confidence            669999999999999999998754432111      00111334556 99999986511  3577899999999999999


Q ss_pred             HhCCCCCCC
Q psy17162        139 ATGRFPYDT  147 (182)
Q Consensus       139 ~~g~~pf~~  147 (182)
                      ++|..||..
T Consensus       204 ~~g~~pf~~  212 (314)
T cd08216         204 ANGHVPFKD  212 (314)
T ss_pred             HhCCCCCCC
Confidence            999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.78  E-value=5.6e-18  Score=128.54  Aligned_cols=137  Identities=20%  Similarity=0.215  Sum_probs=89.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++ .+.++.. +...+++++++...+++.+.+..                   ....|+|+.++   .|+|
T Consensus        52 ~~~~l~h~niv-~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i---vHrD  126 (328)
T cd08226          52 LSHFFRHPNIM-TSWTVFT-TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY---IHRN  126 (328)
T ss_pred             HHHhCCCCCcc-eEeeeEe-cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCC
Confidence            45567887765 4455554 34557788887666555443211                   12347776654   5556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +||+||+++.++.++++||+.+..........      .....+... |++||++....  ..++.++|+||+||++|+|
T Consensus       127 lkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~--~~~~~~~DiwslG~~l~el  203 (328)
T cd08226         127 IKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLP-WLSPELLRQDL--YGYNVKSDIYSVGITACEL  203 (328)
T ss_pred             CCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccC-ccChhhhcCCC--CCCCchhhHHHHHHHHHHH
Confidence            66999999999999999997543221110000      000123445 99999987511  3467899999999999999


Q ss_pred             HhCCCCCCCC
Q psy17162        139 ATGRFPYDTW  148 (182)
Q Consensus       139 ~~g~~pf~~~  148 (182)
                      ++|+.||.+.
T Consensus       204 ~~g~~p~~~~  213 (328)
T cd08226         204 ATGRVPFQDM  213 (328)
T ss_pred             HhCCCCCCCc
Confidence            9999999873

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0670|consensus

Probab=99.78  E-value=4.3e-20  Score=142.05  Aligned_cols=88  Identities=23%  Similarity=0.238  Sum_probs=71.8

Q ss_pred             HhhcchhcccccCCCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHH
Q psy17162         52 IQDYHLCVRSTRYFSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWS  130 (182)
Q Consensus        52 l~~~~~~h~~~~~lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diws  130 (182)
                      |.-++-|.+.|.||||+|||+.+. ..+||||||.|.....+..   +.+..+.. |.|||.+.+    -+|+...|+||
T Consensus       549 LklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei---tPYLVSRF-YRaPEIiLG----~~yd~~iD~WS  620 (752)
T KOG0670|consen  549 LKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI---TPYLVSRF-YRAPEIILG----LPYDYPIDTWS  620 (752)
T ss_pred             HHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc---cHHHHHHh-ccCcceeec----CcccCCcccee
Confidence            333455566677777999999887 4579999999988776653   22334556 999999999    89999999999


Q ss_pred             HHHHHHHHHhCCCCCCC
Q psy17162        131 LGISLIELATGRFPYDT  147 (182)
Q Consensus       131 lg~~l~~l~~g~~pf~~  147 (182)
                      +||++||+.||+..|+|
T Consensus       621 vgctLYElYtGkIlFpG  637 (752)
T KOG0670|consen  621 VGCTLYELYTGKILFPG  637 (752)
T ss_pred             eceeeEEeeccceecCC
Confidence            99999999999999998

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.77  E-value=4.7e-18  Score=125.87  Aligned_cols=133  Identities=18%  Similarity=0.189  Sum_probs=92.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|++++ .+.++.. +...+++++++... ++.+.+..                  ....+||..+++|   +++
T Consensus        51 ~l~~~~~~~i~-~~~~~~~-~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H---~~l  124 (282)
T cd07829          51 LLKELKHPNIV-KLLDVIH-TERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILH---RDL  124 (282)
T ss_pred             HHHhcCCCCHH-HHHhhhh-cCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCC
Confidence            56667776665 3333333 34677888887763 55443311                  1134777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      +|+||+++.++.++|+|||.+......... ......+.. |+|||.+..   ...++.++|+||+|+++|++++|.+||
T Consensus       125 ~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~-~~aPE~~~~---~~~~~~~~Dv~slG~~l~~l~~~~~~~  199 (282)
T cd07829         125 KPQNILINRDGVLKLADFGLARAFGIPLRT-YTHEVVTLW-YRAPEILLG---SKHYSTAVDIWSVGCIFAEMITGKPLF  199 (282)
T ss_pred             ChheEEEcCCCCEEEecCCcccccCCCccc-cCccccCcC-cCChHHhcC---CcCCCccccHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999998765443221 111334556 999999876   126778999999999999999999999


Q ss_pred             CC
Q psy17162        146 DT  147 (182)
Q Consensus       146 ~~  147 (182)
                      .+
T Consensus       200 ~~  201 (282)
T cd07829         200 PG  201 (282)
T ss_pred             CC
Confidence            87

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.76  E-value=1.5e-18  Score=145.32  Aligned_cols=89  Identities=17%  Similarity=0.160  Sum_probs=63.6

Q ss_pred             HHhhcchhcccccCCCCCcEEEcC-------------------CCeEEEeccCCCCCCCchh---------------hhh
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRL-------------------QFLLHLFRFALSGNQDDLL---------------IIR   96 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~-------------------~~~~kl~dfg~a~~~~~~~---------------~~~   96 (182)
                      |+|+.+++|+   ||||+|||++.                   ++.+|++|||+++......               ...
T Consensus        95 ~lH~~gIvHr---DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~  171 (793)
T PLN00181         95 AAHSQGIVVH---NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMK  171 (793)
T ss_pred             HHHhCCeeec---cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccc
Confidence            7887765555   55599999954                   3456677777665421100               000


Q ss_pred             cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         97 GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        97 ~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      .....+++. |+|||++.+    ..++.++||||+||++|||++|.+|+..
T Consensus       172 ~~~~~gt~~-Y~APE~~~~----~~~~~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        172 QILAMEMSW-YTSPEEDNG----SSSNCASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             ccccCCCcc-eEChhhhcc----CCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence            112457788 999999988    7889999999999999999999988764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.76  E-value=5.3e-18  Score=144.78  Aligned_cols=132  Identities=17%  Similarity=0.166  Sum_probs=96.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------HHHHHHhhcchhcccccCCCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------LRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      .+++.++|+|++. +.++.. +....+++|||..++++.+.+..              .+.+|+|..+..++.|+|+||+
T Consensus       735 ~~l~~l~HpnIv~-~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~  812 (968)
T PLN00113        735 ADMGKLQHPNIVK-LIGLCR-SEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPE  812 (968)
T ss_pred             HHHhhCCCCCcce-EEEEEE-cCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHH
Confidence            3566778888764 445544 34567899999998888775421              1235787554556778888899


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      ||+++.++..++. +|.+......     ....++.. |+|||++..    ..++.++||||+||++|||++|+.||..
T Consensus       813 Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~-y~aPE~~~~----~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        813 KIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSA-YVAPETRET----KDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             hEEECCCCceEEE-eccccccccC-----CCcccccc-ccCcccccC----CCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence            9999988887775 5544332211     11356677 999999887    7889999999999999999999999854

>KOG1035|consensus

Probab=99.75  E-value=4.1e-18  Score=141.50  Aligned_cols=112  Identities=20%  Similarity=0.288  Sum_probs=84.4

Q ss_pred             CceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCC
Q psy17162         26 KKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFAL   85 (182)
Q Consensus        26 ~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~   85 (182)
                      ..+|+-|+||+...+.++                    ++++.  |+|+.+++|||++   |.||+++.++.|||.|||+
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLa--YIH~~giIHRDLK---P~NIFLd~~~~VKIGDFGL  743 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLA--YIHDQGIIHRDLK---PRNIFLDSRNSVKIGDFGL  743 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHH--HHHhCceeeccCC---cceeEEcCCCCeeeccccc
Confidence            456788899887666553                    35555  9999986666655   9999999999999999999


Q ss_pred             CCCCC---ch--------------hhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         86 SGNQD---DL--------------LIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        86 a~~~~---~~--------------~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      |....   ..              .....+..+||.. |+|||++..... ..|+.++|+||||++++||+   .||..
T Consensus       744 At~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTal-YvAPEll~~~~~-~~Yn~KiDmYSLGIVlFEM~---yPF~T  817 (1351)
T KOG1035|consen  744 ATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTAL-YVAPELLSDTSS-NKYNSKIDMYSLGIVLFEML---YPFGT  817 (1351)
T ss_pred             chhhhhhhhhHhhccCccccccCCCCcccccccceee-eecHHHhccccc-ccccchhhhHHHHHHHHHHh---ccCCc
Confidence            97722   00              0012345789999 999999987222 26999999999999999996   45755

>KOG0668|consensus

Probab=99.75  E-value=4.3e-18  Score=119.30  Aligned_cols=144  Identities=17%  Similarity=0.170  Sum_probs=99.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCce-EEEeccCccchHHHH----------------HHHHHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKV-VLVTGKGEAEKVQKE----------------LETLRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~----------------l~~~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ||+-+..+.+++.+.++...+..+. .+++|+..+.+..+.                |.++.  |+|+.++.|+|   +|
T Consensus        85 IL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALd--yCHS~GImHRD---VK  159 (338)
T KOG0668|consen   85 ILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALD--YCHSMGIMHRD---VK  159 (338)
T ss_pred             HHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHh--HHHhcCccccc---CC
Confidence            5666665555556666665444444 478888888776653                23333  77776655555   55


Q ss_pred             CCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |.|++++.. ..++|+|+|+|...-....  ....+.+.. |--||.+..   ..-|+.+.|+||+||++..|...+-||
T Consensus       160 PhNvmIdh~~rkLrlIDWGLAEFYHp~~e--YnVRVASRy-fKGPELLVd---y~~YDYSLD~WS~GcmlA~miFrkepF  233 (338)
T KOG0668|consen  160 PHNVMIDHELRKLRLIDWGLAEFYHPGKE--YNVRVASRY-FKGPELLVD---YQMYDYSLDMWSLGCMLASMIFRKEPF  233 (338)
T ss_pred             cceeeechhhceeeeeecchHhhcCCCce--eeeeeehhh-cCCchheee---chhccccHHHHHHHHHHHHHHhccCcc
Confidence            999999865 6799999999977654443  333456667 899999875   256889999999999999999987776


Q ss_pred             CCCCCcHHHHHHH
Q psy17162        146 DTWGSPFEQLKQV  158 (182)
Q Consensus       146 ~~~~~~~~~~~~i  158 (182)
                      .--.+..+++.+|
T Consensus       234 FhG~dN~DQLVkI  246 (338)
T KOG0668|consen  234 FHGHDNYDQLVKI  246 (338)
T ss_pred             cCCCCCHHHHHHH
Confidence            4324444555544

>KOG1025|consensus

Probab=99.75  E-value=1.4e-18  Score=139.81  Aligned_cols=166  Identities=19%  Similarity=0.208  Sum_probs=113.8

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCCC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +..+.|+|++.. ..+...+.  +.+++++...+.|.+++..                  -...|||.++..|+++-   
T Consensus       752 masldHpnl~RL-Lgvc~~s~--~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLa---  825 (1177)
T KOG1025|consen  752 MASLDHPNLLRL-LGVCMLST--LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLA---  825 (1177)
T ss_pred             HhcCCCchHHHH-hhhcccch--HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhh---
Confidence            445667766543 33333233  5567777777777775321                  12459998887777766   


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~pf  145 (182)
                      .+|+|+..-.++|+.|||+++.+......-.......+..|+|-|.+..    ..|++++|+||+|+++||++| |..|+
T Consensus       826 aRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~----~~~thqSDVWsfGVtiWElmTFGa~Py  901 (1177)
T KOG1025|consen  826 ARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI----RKYTHQSDVWSFGVTIWELMTFGAKPY  901 (1177)
T ss_pred             hhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhc----cCCCchhhhhhhhhhHHHHHhcCCCcc
Confidence            9999999999999999999988765443111111122335899998887    899999999999999999998 99999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCC-HHHHHHhhhC
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFS-SDFKDFITLW  182 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s-~~~~~~i~~~  182 (182)
                      .+ ....++-..+..|.+.+.||. ++ +--.-+++||
T Consensus       902 ~g-i~~~eI~dlle~geRLsqPpi-CtiDVy~~mvkCw  937 (1177)
T KOG1025|consen  902 DG-IPAEEIPDLLEKGERLSQPPI-CTIDVYMVMVKCW  937 (1177)
T ss_pred             CC-CCHHHhhHHHhccccCCCCCC-ccHHHHHHHHHHh
Confidence            98 344444444445666555444 55 4455577777

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.75  E-value=2.7e-17  Score=118.70  Aligned_cols=164  Identities=23%  Similarity=0.282  Sum_probs=107.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------H--HHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------L--RCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~--~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.+++++++.. .+... +....++++++...+++...+..               +  ...++|..+++|.   +++
T Consensus        40 ~~~~l~~~~i~~~-~~~~~-~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~---~i~  114 (244)
T smart00220       40 ILKKLKHPNIVRL-YDVFE-DEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHR---DLK  114 (244)
T ss_pred             HHHhCCCCcHHHH-Hhhee-eCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecC---CcC
Confidence            4455666666533 22222 23556777887766565543211               1  1347777766555   455


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++++|||.+........  .....++.. |++||....    ..++.++|+||+|++++++++|..||.
T Consensus       115 ~~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~-~~~pE~~~~----~~~~~~~Di~slG~~l~~l~~~~~p~~  187 (244)
T smart00220      115 PENILLDEDGHVKLADFGLARQLDPGGL--LTTFVGTPE-YMAPEVLLG----KGYGKAVDVWSLGVILYELLTGKPPFP  187 (244)
T ss_pred             HHHeEECCCCcEEEccccceeeeccccc--cccccCCcC-CCCHHHHcc----CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999877655322  222456666 999999876    677889999999999999999999997


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCC--CCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGE--FSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~--~s~~~~~~i~  180 (182)
                      ..... +..............+..  ++.++.+++.
T Consensus       188 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  222 (244)
T smart00220      188 GDDQL-LELFKKIGKPKPPFPPPEWKISPEAKDLIR  222 (244)
T ss_pred             CCCcH-HHHHHHHhccCCCCccccccCCHHHHHHHH
Confidence            73333 333333333223222222  7778887765

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.75  E-value=5.5e-18  Score=136.62  Aligned_cols=93  Identities=12%  Similarity=-0.005  Sum_probs=64.2

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC---------
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP---------  119 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~---------  119 (182)
                      .|+|+.+   +.||||||+|||++. ++.+||+|||+|+.............++++. |+|||.+......         
T Consensus       269 ~yLH~~g---IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~-Y~APE~~~~~~~~~~~~~~~~~  344 (566)
T PLN03225        269 DGLHSTG---IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPR-YAAPEQYIMSTQTPSAPSAPVA  344 (566)
T ss_pred             HHHHHCC---EEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCC-ccChHHhhccCCCCCCcccccc
Confidence            3677665   455566699999986 5789999999997654332211233667777 9999976431110         


Q ss_pred             ---------CCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162        120 ---------SNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus       120 ---------~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                               ..++.++||||+||++|+|+++..|+.
T Consensus       345 ~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~  380 (566)
T PLN03225        345 TALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD  380 (566)
T ss_pred             ccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc
Confidence                     123345699999999999998776654

>KOG1152|consensus

Probab=99.74  E-value=1.2e-18  Score=135.55  Aligned_cols=132  Identities=20%  Similarity=0.221  Sum_probs=98.1

Q ss_pred             hHHHHhC---CCCcEEEEEEeeecCCCceEEEec-cCccchHHHHHH---------------H--HHHHHHhhcchhccc
Q psy17162          3 SIRAVFN---QDEIGVTVSSVKTTDDKKVVLVTG-KGEAEKVQKELE---------------T--LRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~---------------~--~~~~~l~~~~~~h~~   61 (182)
                      +|+..++   |.|++ .+.++++ ++.++|++++ .+++-+|+++++               .  ....+||+.+++||+
T Consensus       618 qIla~l~~~sH~NIl-KlLdfFE-ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrd  695 (772)
T KOG1152|consen  618 QILATLNKHSHENIL-KLLDFFE-DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRD  695 (772)
T ss_pred             HHHHHhhhcCccchh-hhhheee-cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecc
Confidence            4677777   66665 5566766 6677788776 455556777531               0  112467777666555


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHh
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELAT  140 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~  140 (182)
                      +   |.+|+.++.+|-+||+|||.|...+.+.-   ..++|+.. |+|||++.+    ..|- ..-|||++|+++|.+..
T Consensus       696 i---kdenvivd~~g~~klidfgsaa~~ksgpf---d~f~gtv~-~aapevl~g----~~y~gk~qdiwalgillytivy  764 (772)
T KOG1152|consen  696 I---KDENVIVDSNGFVKLIDFGSAAYTKSGPF---DVFVGTVD-YAAPEVLGG----EKYLGKPQDIWALGILLYTIVY  764 (772)
T ss_pred             c---ccccEEEecCCeEEEeeccchhhhcCCCc---ceeeeecc-ccchhhhCC----CccCCCcchhhhhhheeeEEEe
Confidence            5   49999999999999999999977766543   33889999 999999998    5565 66899999999999988


Q ss_pred             CCCCCCC
Q psy17162        141 GRFPYDT  147 (182)
Q Consensus       141 g~~pf~~  147 (182)
                      ...||-+
T Consensus       765 kenpyyn  771 (772)
T KOG1152|consen  765 KENPYYN  771 (772)
T ss_pred             ccCCCcC
Confidence            8888743

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.73  E-value=1.7e-16  Score=130.57  Aligned_cols=73  Identities=22%  Similarity=0.414  Sum_probs=53.9

Q ss_pred             CCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCC-CCCCCCCHHHHHHhh
Q psy17162        102 DCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPR-LPPGEFSSDFKDFIT  180 (182)
Q Consensus       102 ~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~~~~i~  180 (182)
                      |++. |+|||++.+    ..++.++||||+||++|||++|.+||.+ ....+....+.....+. .....++..+.+++.
T Consensus       542 GT~~-Y~APE~l~~----~~~~~~~DiwSlG~il~ElltG~~pf~~-~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~  615 (669)
T cd05610         542 GTPD-YLAPELLLG----KPHGPAVDWWALGVCLFEFLTGIPPFND-ETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIE  615 (669)
T ss_pred             eCcc-ccCHHHcCC----CCCCcHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhcCCCCCcccccCCHHHHHHHH
Confidence            4666 999999988    7789999999999999999999999988 45556566665443221 112356777777665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.72  E-value=9e-17  Score=114.95  Aligned_cols=153  Identities=19%  Similarity=0.156  Sum_probs=100.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------H--HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------L--RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~--~~~~l~~~~~~h~~~~~l   65 (182)
                      .++.+++.+++.. ..... .....++++++....++.+.+..                +  ...++|+.++   .|+|+
T Consensus        50 ~~~~~~~~~i~~~-~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~di  124 (225)
T smart00221       50 ILKKLKHPNIVKL-YGVFE-DPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI---VHRDL  124 (225)
T ss_pred             HHHhCCCCChhhh-eeeee-cCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCC
Confidence            4556667665543 33333 33556778887776565554321                0  1236666654   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCcccc-CCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERI-DPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~-~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +|.|++++.++.++|+|||.+...............+... |++||.+ ..    ..++.++|+|++|++++++++|+.|
T Consensus       125 ~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~-~~~pe~~~~~----~~~~~~~Dv~~lG~~~~~l~~g~~p  199 (225)
T smart00221      125 KPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPF-YLAPEVLLGG----KGYGEAVDIWSLGVILYELLWGPEP  199 (225)
T ss_pred             CHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCC-cCCHhHhcCC----CCCCchhhHHHHHHHHHHHHHCCCC
Confidence            6999999999999999999887765432000122455566 9999988 33    5677899999999999999999999


Q ss_pred             CCC-CCCcHHHHHHHhhCCCCCC
Q psy17162        145 YDT-WGSPFEQLKQVVQDDPPRL  166 (182)
Q Consensus       145 f~~-~~~~~~~~~~i~~~~~~~~  166 (182)
                      |.+ ..........+..+.++++
T Consensus       200 f~~~~~~~~~~~~~~~~~~~~~~  222 (225)
T smart00221      200 FSGEGEFTSLLSDVWSFGVPLLW  222 (225)
T ss_pred             ccccchhHHHHHHHHhcCCcccc
Confidence            976 3333344445555554433

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG3653|consensus

Probab=99.72  E-value=1.2e-17  Score=127.20  Aligned_cols=134  Identities=16%  Similarity=0.108  Sum_probs=93.7

Q ss_pred             hCCCCcEEEEE--EeeecCCCceEEEeccCccchHHHHHHHH----------------HHHHHhhcch------hccccc
Q psy17162          8 FNQDEIGVTVS--SVKTTDDKKVVLVTGKGEAEKVQKELETL----------------RCIYIQDYHL------CVRSTR   63 (182)
Q Consensus         8 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~l~~~~~------~h~~~~   63 (182)
                      .+|.|++..+.  .-.......+.+++++...++|.++|.+-                ..+|||.-+-      -.+.||
T Consensus       261 m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHR  340 (534)
T KOG3653|consen  261 MKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHR  340 (534)
T ss_pred             ccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccc
Confidence            44666653332  22233356777999999999999986321                2358886433      236899


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCC--ccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYD--IRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~--~~~Diwslg~~l~~l~~  140 (182)
                      |+|++|||+..|+++.|+|||+|..+....... ....+||.. |||||++.+.-+-...+  .+.||||+|.++|||++
T Consensus       341 DlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~R-YMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~S  419 (534)
T KOG3653|consen  341 DLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRR-YMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIAS  419 (534)
T ss_pred             cccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhh-hcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999997765332210 112678888 99999998622111111  46899999999999987


Q ss_pred             CC
Q psy17162        141 GR  142 (182)
Q Consensus       141 g~  142 (182)
                      +-
T Consensus       420 RC  421 (534)
T KOG3653|consen  420 RC  421 (534)
T ss_pred             hc
Confidence            54

>KOG1027|consensus

Probab=99.72  E-value=1.3e-17  Score=134.05  Aligned_cols=120  Identities=18%  Similarity=0.234  Sum_probs=80.9

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcC---CC--eEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCC
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRL---QF--LLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNY  122 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~---~~--~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~  122 (182)
                      ++||+++++   |||+||.|||++.   ++  .++|+|||+++........  +.....|+.. |.|||++..    ..-
T Consensus       620 aHLHsl~iV---HRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~G-W~APE~L~~----~~~  691 (903)
T KOG1027|consen  620 AHLHSLKIV---HRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSG-WQAPEQLRE----DRK  691 (903)
T ss_pred             HHHHhcccc---cccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCccc-ccCHHHHhc----ccc
Confidence            377776554   5555599999986   34  5799999999887654332  2333677888 999999998    455


Q ss_pred             CccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCC--CCCCCCCCHHHHHHhhh
Q psy17162        123 DIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPP--RLPPGEFSSDFKDFITL  181 (182)
Q Consensus       123 ~~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~~~~i~~  181 (182)
                      ..++||+|+||++|+.++ |..||..   ..++-.+|+.+..-  .+.+. -..+++|+|.+
T Consensus       692 ~~avDiFslGCvfyYvltgG~HpFGd---~~~R~~NIl~~~~~L~~L~~~-~d~eA~dLI~~  749 (903)
T KOG1027|consen  692 TQAVDIFSLGCVFYYVLTGGSHPFGD---SLERQANILTGNYTLVHLEPL-PDCEAKDLISR  749 (903)
T ss_pred             CcccchhhcCceEEEEecCCccCCCc---hHHhhhhhhcCccceeeeccC-chHHHHHHHHH
Confidence            579999999999999888 5999965   22444455554321  11111 01177777753

>KOG1345|consensus

Probab=99.71  E-value=9.1e-18  Score=120.24  Aligned_cols=164  Identities=16%  Similarity=0.280  Sum_probs=104.3

Q ss_pred             CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------HHHHHHHhhcchhcccccCCCCCcEEE
Q psy17162          9 NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------TLRCIYIQDYHLCVRSTRYFSVDTFHQ   72 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~~~~~~l~~~~~~h~~~~~lk~~nil~   72 (182)
                      .++.+++.-+++...+...++.++|+...++|..-+.                ..+..|.|+..++|   ||||.+|||+
T Consensus        78 s~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVH---RdlK~eNiLi  154 (378)
T KOG1345|consen   78 SPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVH---RDLKAENILI  154 (378)
T ss_pred             ccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhh---cccccceEEE
Confidence            3455555555555556667778999988888876321                11123666665555   5555999988


Q ss_pred             c-CC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC--CccchHHHHHHHHHHHHhCCCCCCC-
Q psy17162         73 R-LQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY--DIRSDVWSLGISLIELATGRFPYDT-  147 (182)
Q Consensus        73 ~-~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~--~~~~Diwslg~~l~~l~~g~~pf~~-  147 (182)
                      - .+ ..+||||||.++..+......    -..-. |.+||.+... .++.+  .+.+|+|.||+++|..+||.+||+. 
T Consensus       155 f~~df~rvKlcDFG~t~k~g~tV~~~----~~~~~-y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  155 FDADFYRVKLCDFGLTRKVGTTVKYL----EYVNN-YHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             ecCCccEEEeeecccccccCceehhh----hhhcc-cCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcchhh
Confidence            3 33 479999999987765543311    11223 8899887642 22333  3788999999999999999999975 


Q ss_pred             --CCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        148 --WGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       148 --~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                        +..+.-...+...+..+..|  ...+|+.+..+.++
T Consensus       229 ~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk  266 (378)
T KOG1345|consen  229 SIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKK  266 (378)
T ss_pred             hccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHH
Confidence              23333334444444444553  23677777766553

>KOG0671|consensus

Probab=99.71  E-value=5.8e-18  Score=125.75  Aligned_cols=87  Identities=20%  Similarity=0.280  Sum_probs=70.7

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcC--------------------CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccC
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRL--------------------QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIR  109 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~--------------------~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~a  109 (182)
                      .+||+.+++|.|++   |+||++..                    +-.++++|||.|....+.    .+..+.|.. |.|
T Consensus       206 ~fLh~~kl~HTDLK---PENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRH-YRA  277 (415)
T KOG0671|consen  206 AFLHDLKLTHTDLK---PENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRH-YRA  277 (415)
T ss_pred             HHHHhcceeecCCC---hheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC----cceeeeccc-cCC
Confidence            38888887777766   99998831                    224799999998664332    233667788 999


Q ss_pred             ccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162        110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus       110 Pe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      ||++.+    -+++.++|+||+||+++|+.+|...|.+-
T Consensus       278 PEViLg----LGwS~pCDvWSiGCIL~ElytG~~LFqtH  312 (415)
T KOG0671|consen  278 PEVILG----LGWSQPCDVWSIGCILVELYTGETLFQTH  312 (415)
T ss_pred             chheec----cCcCCccCceeeeeEEEEeeccceecccC
Confidence            999999    89999999999999999999999999883

>KOG0603|consensus

Probab=99.70  E-value=2.8e-17  Score=128.94  Aligned_cols=156  Identities=21%  Similarity=0.295  Sum_probs=117.9

Q ss_pred             hhHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-----------------HHHHHHHHhhcchhcccccC
Q psy17162          2 RSIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-----------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         2 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-----------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      |.++.....++.++.+....+ ++.+++++.++..++++...+                 .++..+.+|..++++++.+ 
T Consensus        47 r~il~~~~~~~f~v~lhyafq-t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k-  124 (612)
T KOG0603|consen   47 RIILAFVHNTPFLVKLHYAFQ-TDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYK-  124 (612)
T ss_pred             HHHHhhccCCCceeeeeeeec-cccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhccc-
Confidence            456666666778878777776 667788888887777766532                 2234456777766666655 


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                        ++||+++.+|++++.|||.++.......     .||+.. |||||+..+      +..++|+||+|++.++|++|..|
T Consensus       125 --~enilld~~Ghi~~tdfglske~v~~~~-----~cgt~e-ymApEI~~g------h~~a~D~ws~gvl~felltg~~p  190 (612)
T KOG0603|consen  125 --LENVLLLLEGHIKLTDFGLSKEAVKEKI-----ACGTYE-YRAPEIING------HLSAADWWSFGVLAFELLTGTLP  190 (612)
T ss_pred             --ccceeecccCccccCCchhhhHhHhhhh-----cccchh-hhhhHhhhc------cCCcccchhhhhhHHHHhhCCCC
Confidence              9999999999999999999988666544     378888 999999864      56889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |.+     +....|.... +.. |...+.+++++++
T Consensus       191 f~~-----~~~~~Il~~~-~~~-p~~l~~~a~~~~~  219 (612)
T KOG0603|consen  191 FGG-----DTMKRILKAE-LEM-PRELSAEARSLFR  219 (612)
T ss_pred             Cch-----HHHHHHhhhc-cCC-chhhhHHHHHHHH
Confidence            977     5666665543 334 4557788888775

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.68  E-value=6.3e-16  Score=122.60  Aligned_cols=94  Identities=13%  Similarity=0.159  Sum_probs=63.0

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC---------
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS---------  120 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~---------  120 (182)
                      .|+|..+   +.|+|+||+||+++.++.+||+|||++...............+++. |++||.+.......         
T Consensus       323 ~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~-Y~aPE~l~~~~~~~~~~~~~~~~  398 (507)
T PLN03224        323 RKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPR-YSPPEELVMPQSCPRAPAPAMAA  398 (507)
T ss_pred             HHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcc-eeChhhhcCCCCCCccchhhhhh
Confidence            3666665   4556666999999999999999999986543322111111233566 99999876411000         


Q ss_pred             -------CCC--ccchHHHHHHHHHHHHhCCC-CCCC
Q psy17162        121 -------NYD--IRSDVWSLGISLIELATGRF-PYDT  147 (182)
Q Consensus       121 -------~~~--~~~Diwslg~~l~~l~~g~~-pf~~  147 (182)
                             .++  ...|+||+||++++|++|.. ||.+
T Consensus       399 ~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~  435 (507)
T PLN03224        399 LLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN  435 (507)
T ss_pred             hhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence                   011  34799999999999999874 7754

>KOG0576|consensus

Probab=99.66  E-value=3.9e-17  Score=128.87  Aligned_cols=166  Identities=19%  Similarity=0.207  Sum_probs=114.9

Q ss_pred             HHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH------HHHHH-----------HHHHhhcchhcccccCCCCC
Q psy17162          6 AVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE------LETLR-----------CIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------l~~~~-----------~~~l~~~~~~h~~~~~lk~~   68 (182)
                      +--+|+|++..+..+-.  ...+.+.|||+.+++++++      ++.+.           ..|||+.+.+||   |+|.-
T Consensus        67 ~dc~h~nivay~gsylr--~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hR---diKGa  141 (829)
T KOG0576|consen   67 RDCRHPNIVAYFGSYLR--RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHR---DIKGA  141 (829)
T ss_pred             ecCCCcChHHHHhhhhh--hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccc---ccccc
Confidence            34566776644333322  3345567778777777663      11111           136666655555   55599


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      ||+++..|.+|++|||.+..++...-.+.. +.|+++ |||||+..-. ..+.|...+|+|++|++..|+..-++|... 
T Consensus       142 nilltd~gDvklaDfgvsaqitati~Krks-fiGtpy-wmapEvaave-rkggynqlcdiwa~gitAiel~eLqpplfd-  217 (829)
T KOG0576|consen  142 NILLTDEGDVKLADFGVSAQITATIAKRKS-FIGTPY-WMAPEVAAVE-RKGGYNQLCDIWALGITAIELGELQPPLFD-  217 (829)
T ss_pred             ceeecccCceeecccCchhhhhhhhhhhhc-ccCCcc-ccchhHHHHH-hcccccccccccccccchhhhhhcCCcccc-
Confidence            999999999999999999887766544445 899999 9999986632 237889999999999999999999999877 


Q ss_pred             CCcHHHHHHHh-hCC-CCCCC-CCCCCHHHHHHhh
Q psy17162        149 GSPFEQLKQVV-QDD-PPRLP-PGEFSSDFKDFIT  180 (182)
Q Consensus       149 ~~~~~~~~~i~-~~~-~~~~~-~~~~s~~~~~~i~  180 (182)
                      ..++..++... ++. +|.+. +..|++.+.+|++
T Consensus       218 lhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK  252 (829)
T KOG0576|consen  218 LHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVK  252 (829)
T ss_pred             cchHHHHHHhhccCCCCCcccCCccchHHHHHHHH
Confidence            45656555543 333 33333 3378999999886

>KOG0606|consensus

Probab=99.63  E-value=5.1e-16  Score=128.00  Aligned_cols=125  Identities=26%  Similarity=0.363  Sum_probs=95.4

Q ss_pred             HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh--------------hcccCCCCCCcccCccc
Q psy17162         47 LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII--------------RGLYGADCDPNFIRPER  112 (182)
Q Consensus        47 ~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--------------~~~~~~~~~~~~~aPe~  112 (182)
                      +..+|+|..++.|++++   |+|.++..-|++|+.|||+++........              .....||++. |.|||+
T Consensus       154 la~Eylh~ygivhrdlk---pdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPe-yiaPeV  229 (1205)
T KOG0606|consen  154 LAVEYLHSYGIVHRDLK---PDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPE-YIAPEV  229 (1205)
T ss_pred             HHhHhhccCCeecCCCC---CCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcc-ccChhh
Confidence            44568877766665555   99999999999999999998653221110              0123689999 999999


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        113 IDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       113 ~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      +.-    .+|+..+|+|++|+++|+.+-|..||.+ +.+++.+.+++... ..+|  .+..++++++++.+
T Consensus       230 ilr----qgygkpvdwwamGiIlyeFLVgcvpffG-dtpeelfg~visd~-i~wpE~dea~p~Ea~dli~~  294 (1205)
T KOG0606|consen  230 ILR----QGYGKPVDWWAMGIILYEFLVGCVPFFG-DTPEELFGQVISDD-IEWPEEDEALPPEAQDLIEQ  294 (1205)
T ss_pred             hhh----hccCCCccHHHHHHHHHHHheeeeeccC-CCHHHHHhhhhhhh-ccccccCcCCCHHHHHHHHH
Confidence            998    7899999999999999999999999999 57777777766543 2333  23677899998764

>KOG0195|consensus

Probab=99.53  E-value=2.5e-14  Score=103.02  Aligned_cols=159  Identities=16%  Similarity=0.290  Sum_probs=104.7

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchh-cccccC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLC-VRSTRY   64 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~-h~~~~~   64 (182)
                      |++|.|+|+...+......  ..+.++..|...++++..|..                   -..+|||++--. .+-  .
T Consensus       241 lrifshpnilpvlgacnsp--pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~--~  316 (448)
T KOG0195|consen  241 LRIFSHPNILPVLGACNSP--PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRF--Y  316 (448)
T ss_pred             eeeecCCchhhhhhhccCC--CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhh--h
Confidence            5678899988665555554  334555555555555443210                   113588886432 222  3


Q ss_pred             CCCCcEEEcCCCeEEE--eccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRLQFLLHL--FRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl--~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g  141 (182)
                      +++..++++++.+.+|  +|-.+++....        ...++. |++||.++..  +.... .++|+|||++++||+.|+
T Consensus       317 lns~hvmidedltarismad~kfsfqe~g--------r~y~pa-wmspealqrk--ped~n~raadmwsfaillwel~tr  385 (448)
T KOG0195|consen  317 LNSKHVMIDEDLTARISMADTKFSFQEVG--------RAYSPA-WMSPEALQRK--PEDLNIRAADMWSFAILLWELNTR  385 (448)
T ss_pred             cccceEEecchhhhheecccceeeeeccc--------cccCcc-cCCHHHHhcC--chhcchhhhhHHHHHHHHHHhhcc
Confidence            4588999999876655  46555533211        234556 9999999861  12222 789999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..||... ++++.-.+| +.|.++.+|| .+|.....+++
T Consensus       386 evpfadl-spmecgmkialeglrv~ipp-gis~hm~klm~  423 (448)
T KOG0195|consen  386 EVPFADL-SPMECGMKIALEGLRVHIPP-GISRHMNKLMN  423 (448)
T ss_pred             ccccccC-CchhhhhhhhhccccccCCC-CccHHHHHHHH
Confidence            9999984 666666665 6788899955 47887777664

>KOG0590|consensus

Probab=99.47  E-value=2.1e-14  Score=116.15  Aligned_cols=90  Identities=24%  Similarity=0.411  Sum_probs=74.1

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh---hhcccCCCCCCcccCccccCCCCCCCCCC-cc
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI---IRGLYGADCDPNFIRPERIDPSGNPSNYD-IR  125 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~---~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~  125 (182)
                      .|+|..++.|++++   ++|+++..+|.+|++|||.+.....+..   ......+|+.+ |+|||++..    ..|+ ..
T Consensus       434 ~y~h~~GiahrdlK---~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~p-Y~apE~~~~----~~ydpr~  505 (601)
T KOG0590|consen  434 KYLHSMGLAHRDLK---LENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDP-YLAPEVLTG----KEYDPRA  505 (601)
T ss_pred             HHHHhcCceeccCc---cccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCc-CcCcccccc----cccCcch
Confidence            38888777766666   9999999999999999998866543222   22345789999 999999998    7787 67


Q ss_pred             chHHHHHHHHHHHHhCCCCCCC
Q psy17162        126 SDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       126 ~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||||.|+++..|.+|+.||..
T Consensus       506 vDiwS~~ii~~~m~~~~~~Wk~  527 (601)
T KOG0590|consen  506 VDVWSCGIIYICMILGRFPWKV  527 (601)
T ss_pred             hhhhhccceEEEEecCCCcccc
Confidence            8999999999999999999965

>KOG1167|consensus

Probab=99.41  E-value=2.4e-13  Score=102.40  Aligned_cols=144  Identities=17%  Similarity=0.179  Sum_probs=89.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------H--HHHHHhhcchhcccccCCCCCc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------L--RCIYIQDYHLCVRSTRYFSVDT   69 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------~--~~~~l~~~~~~h~~~~~lk~~n   69 (182)
                      .|..++-.+++.-+.+... ....+..+++|.+.....+.+..            +  ++.++|..+   +.|||+||.|
T Consensus        87 ~L~~~gG~~ni~~~~~~~r-nnd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsN  162 (418)
T KOG1167|consen   87 MLYRLGGSDNIIKLNGCFR-NNDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSN  162 (418)
T ss_pred             HHHHhccchhhhcchhhhc-cCCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccc
Confidence            4556666555555544444 33446677777665555443221            1  112555554   4555566999


Q ss_pred             EEEcCC-CeEEEeccCCCCCCCchh---h----------h---------------------h---------cccCCCCCC
Q psy17162         70 FHQRLQ-FLLHLFRFALSGNQDDLL---I----------I---------------------R---------GLYGADCDP  105 (182)
Q Consensus        70 il~~~~-~~~kl~dfg~a~~~~~~~---~----------~---------------------~---------~~~~~~~~~  105 (182)
                      ++.+.. +.-.|.|||+|.......   .          .                     +         .....|++.
T Consensus       163 FL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~G  242 (418)
T KOG1167|consen  163 FLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPG  242 (418)
T ss_pred             cccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCC
Confidence            999866 667899999987210000   0          0                     0         001357888


Q ss_pred             cccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHH
Q psy17162        106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQL  155 (182)
Q Consensus       106 ~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~  155 (182)
                       |.|||++..   ....+++.|+||.|+++..++++..||.-..++.+.+
T Consensus       243 -fRaPEvL~k---~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al  288 (418)
T KOG1167|consen  243 -FRAPEVLFR---CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADAL  288 (418)
T ss_pred             -CCchHHHhh---ccCcCCccceeeccceeehhhccccccccCccccchH
Confidence             999999886   2556689999999999999999999986433333333

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.33  E-value=2e-11  Score=85.83  Aligned_cols=124  Identities=21%  Similarity=0.231  Sum_probs=83.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.+.+ +..+....... ...++++++..+.++.+.+...                  ...++|..++   .|+|+
T Consensus        44 ~~~~l~~~~-i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---~H~dl  118 (215)
T cd00180          44 ILKKLNHPN-IVKLYGVFEDE-NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI---IHRDL  118 (215)
T ss_pred             HHHhcCCCC-eeeEeeeeecC-CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCC
Confidence            556677744 44445554433 5677888887766666544211                  1246666654   45556


Q ss_pred             CCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC-CCCccchHHHHHHHHHHH
Q psy17162         66 SVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS-NYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        66 k~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~-~~~~~~Diwslg~~l~~l  138 (182)
                      +|.||+++. ++.++|+|||.+............ ..+... |++||....    . ..+.+.|+|++|++++++
T Consensus       119 ~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~-~~~~~~-~~~pe~~~~----~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         119 KPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT-IVGTPA-YMAPEVLLG----KGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             CHhhEEEeCCCCcEEEecCCceEEccCCcchhhc-ccCCCC-ccChhHhcc----cCCCCchhhhHHHHHHHHHH
Confidence            699999999 899999999988765443210011 344555 999999876    4 667889999999999998

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.33  E-value=9.4e-11  Score=87.51  Aligned_cols=139  Identities=21%  Similarity=0.213  Sum_probs=95.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH--------------------HHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL--------------------RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------------~~~~l~~~~~~h~~~~   63 (182)
                      +++.+.+++.+..+.+... .....+.++++..+..+.+.+...                    ...++|..+   ..||
T Consensus        50 ~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hr  125 (384)
T COG0515          50 ILASLNHPPNIVKLYDFFQ-DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHR  125 (384)
T ss_pred             HHHHccCCcceeeEEEEEe-cCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecc
Confidence            4566777755555555553 444467888887777766433210                    013566666   4555


Q ss_pred             CCCCCcEEEcCCC-eEEEeccCCCCCCCchhhh-----hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         64 YFSVDTFHQRLQF-LLHLFRFALSGNQDDLLII-----RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        64 ~lk~~nil~~~~~-~~kl~dfg~a~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      |+||+|++++..+ .++++|||.+.........     ......++.. |++||.+.... ....+...|+||+|+++++
T Consensus       126 d~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~-~~~pe~~~~~~-~~~~~~~~D~~s~g~~~~~  203 (384)
T COG0515         126 DIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPG-YMAPEVLLGLS-LAYASSSSDIWSLGITLYE  203 (384)
T ss_pred             CCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccc-cCCHHHhcCCC-CCCCCchHhHHHHHHHHHH
Confidence            5669999999988 7999999998755433211     1233678888 99999987510 0256688999999999999


Q ss_pred             HHhCCCCCCCC
Q psy17162        138 LATGRFPYDTW  148 (182)
Q Consensus       138 l~~g~~pf~~~  148 (182)
                      +++|..||...
T Consensus       204 ~~~~~~p~~~~  214 (384)
T COG0515         204 LLTGLPPFEGE  214 (384)
T ss_pred             HHhCCCCCCCC
Confidence            99999998773

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.29  E-value=9.9e-12  Score=95.12  Aligned_cols=102  Identities=10%  Similarity=-0.042  Sum_probs=68.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH------------HHHHHHHHHhhcchhcccccCC-CCCc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE------------LETLRCIYIQDYHLCVRSTRYF-SVDT   69 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------l~~~~~~~l~~~~~~h~~~~~l-k~~n   69 (182)
                      .+++.++|+|++..+.+.     ...+++||+..+.++...            +.+  ..++|+.+++   |+|+ ||+|
T Consensus        73 ~iL~~L~h~~iv~~l~~~-----~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~a--L~~lH~~gIi---HrDL~KP~N  142 (365)
T PRK09188         73 RALKTVRGIGVVPQLLAT-----GKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRA--LRDLHRAGIT---HNDLAKPQN  142 (365)
T ss_pred             HHHHhccCCCCCcEEEEc-----CCcEEEEEccCCCCHHHhCccchHHHHHHHHHH--HHHHHHCCCe---eCCCCCcce
Confidence            367788898887555442     346899999877665431            222  3377776555   4555 5999


Q ss_pred             EEEcCCCeEEEeccCCCCCCCchhh---h----hcccCCCCCCcccCccccCC
Q psy17162         70 FHQRLQFLLHLFRFALSGNQDDLLI---I----RGLYGADCDPNFIRPERIDP  115 (182)
Q Consensus        70 il~~~~~~~kl~dfg~a~~~~~~~~---~----~~~~~~~~~~~~~aPe~~~~  115 (182)
                      |+++.++.++|+|||+|+.......   .    .-+...++.. |.+||.+..
T Consensus       143 ILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~pe~~~~  194 (365)
T PRK09188        143 WLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKR-TYAPDALTP  194 (365)
T ss_pred             EEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCc-cCCcccCCh
Confidence            9999899999999999986543221   0    0012455666 899998875

>KOG1033|consensus

Probab=99.28  E-value=1.2e-12  Score=101.40  Aligned_cols=109  Identities=18%  Similarity=0.154  Sum_probs=81.5

Q ss_pred             ceEEEeccCccchHHHHHHH----------HHHHHHhhcc----hhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCch
Q psy17162         27 KVVLVTGKGEAEKVQKELET----------LRCIYIQDYH----LCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDL   92 (182)
Q Consensus        27 ~~~~~~~~~~~~~l~~~l~~----------~~~~~l~~~~----~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~   92 (182)
                      ++|+.|+.+....+.+.+..          +.....+...    ...-.|+|+||.||....+..+||.|||+.......
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~  409 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKD  409 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecccC
Confidence            46788888998899888732          1111222211    123346777799999999999999999987654433


Q ss_pred             h-----hhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         93 L-----IIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        93 ~-----~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      .     ....+...|+.+ ||+||.+.+    ..|+.++|||+||.+++|++.
T Consensus       410 ~~~~~~~a~~t~~~gt~~-YmsPEQi~g----~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  410 ETVAPAAASHTQQVGTLL-YMSPEQIRG----QQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             Ccccchhhhhhhcccccc-cCCHHHHhh----hhhhhhcchhhHHHHHHHHHH
Confidence            2     223555789999 999999998    789999999999999999987

>KOG4158|consensus

Probab=99.21  E-value=8.2e-11  Score=89.12  Aligned_cols=126  Identities=13%  Similarity=0.176  Sum_probs=74.8

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCC----eEEEeccCCCCCCCchhhh--hcc--cCCCCCCcccCccccCCC-CCCC
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQF----LLHLFRFALSGNQDDLLII--RGL--YGADCDPNFIRPERIDPS-GNPS  120 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~----~~kl~dfg~a~~~~~~~~~--~~~--~~~~~~~~~~aPe~~~~~-~~~~  120 (182)
                      .+||.+++.|+|++   ++|||+.-+.    ++.++|||++-......-.  ..+  .-.|...+.+|||+.... ++..
T Consensus       355 ~hL~~hgvAhRDlK---SDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a  431 (598)
T KOG4158|consen  355 THLHKHGVAHRDLK---SDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA  431 (598)
T ss_pred             HHHHHccchhhccc---ccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence            38888877666655   9999995442    5799999987432221100  001  012222238999987631 0111


Q ss_pred             CCC-ccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhh
Q psy17162        121 NYD-IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       121 ~~~-~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..+ .++|.|+.|.+.||+++...||-+. ..+..-... .+...|.+ |+.+++.+++++.
T Consensus       432 vvny~kAD~WA~GalaYEIfg~~NPFY~r-Gem~L~~r~Yqe~qLPal-p~~vpp~~rqlV~  491 (598)
T KOG4158|consen  432 VVNYEKADTWAAGALAYEIFGRSNPFYKR-GEMLLDTRTYQESQLPAL-PSRVPPVARQLVF  491 (598)
T ss_pred             eeccchhhhhhhhhhHHHHhccCCccccc-chheechhhhhhhhCCCC-cccCChHHHHHHH
Confidence            112 5789999999999999999999761 111111111 12334556 5678888888763

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.20  E-value=9.6e-11  Score=82.74  Aligned_cols=132  Identities=8%  Similarity=-0.059  Sum_probs=81.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH--------H--HHHHHHhhcchhcccccCC-CCCcEE
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE--------T--LRCIYIQDYHLCVRSTRYF-SVDTFH   71 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------~--~~~~~l~~~~~~h~~~~~l-k~~nil   71 (182)
                      .+++.+.+++.+..+.+.     ...++++++..+.++.+...        .  ....++|..++   .|+|+ ||+||+
T Consensus        53 ~iL~~L~~~~~vP~ll~~-----~~~~lvmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GI---vHrDL~kp~NIL  124 (218)
T PRK12274         53 LALRQLDGLPRTPRLLHW-----DGRHLDRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGV---AHNDLAKEANWL  124 (218)
T ss_pred             HHHHhcCCCCCCCEEEEE-----cCEEEEEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcC---ccCCCCCcceEE
Confidence            367778765655555443     22577777777766654321        0  01235666654   45555 599999


Q ss_pred             EcCCCeEEEeccCCCCCCCchhh-----h--------hcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHH
Q psy17162         72 QRLQFLLHLFRFALSGNQDDLLI-----I--------RGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIE  137 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~~~-----~--------~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~  137 (182)
                      ++.++.++|+|||.+........     .        ... ...++. +++|+...-.   ...+ ...++.+.|+-+|.
T Consensus       125 v~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~-~~y~~~-~l~~~~~~~l---~~~~~~~~~w~~~g~~~~~  199 (218)
T PRK12274        125 VQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHK-RMYCPA-ALTPVERRVL---KRTSWIRELWFATGKPVYR  199 (218)
T ss_pred             EcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHH-HhcCCC-CCCHHHHhhh---ccchhHHHHHHHhcchHHH
Confidence            99999999999999975433221     0        001 123444 6677643320   2333 44566799999999


Q ss_pred             HHhCCCCCCC
Q psy17162        138 LATGRFPYDT  147 (182)
Q Consensus       138 l~~g~~pf~~  147 (182)
                      ++|+..|+.+
T Consensus       200 ~~~~~~~~~~  209 (218)
T PRK12274        200 FVTRRVLHWE  209 (218)
T ss_pred             HHhccCCccc
Confidence            9999988866

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.20  E-value=7.1e-12  Score=92.48  Aligned_cols=90  Identities=23%  Similarity=0.317  Sum_probs=58.6

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC----CCCCCCcc
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG----NPSNYDIR  125 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~----~~~~~~~~  125 (182)
                      +++|..++.|.+++   |+|++++.+|.+.|.||+.....+.....    ...+.. |.+||......    ....++.+
T Consensus       159 A~Lh~~GlVHgdi~---~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~-~~PPe~~~~~~~~~~~~~~~t~~  230 (288)
T PF14531_consen  159 ANLHSYGLVHGDIK---PENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVA-FTPPELESCAGQFGQNNAPYTFA  230 (288)
T ss_dssp             HHHHHTTEEEST-S---GGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TT-TS-HHHHHHHTSCHHSEEEE-HH
T ss_pred             HHHhhcceEecccc---eeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcc-cCChhhhhhhcccCcccceeeec
Confidence            57777776665555   99999999999999999876555443321    112244 89999775410    01246678


Q ss_pred             chHHHHHHHHHHHHhCCCCCCC
Q psy17162        126 SDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       126 ~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      .|.|++|+++|.++++..||..
T Consensus       231 ~DaW~LG~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  231 TDAWQLGITLYSLWCGRLPFGL  252 (288)
T ss_dssp             HHHHHHHHHHHHHHHSS-STCC
T ss_pred             cCHHHHHHHHHHHHHccCCCCC
Confidence            9999999999999999999976

>KOG1023|consensus

Probab=99.17  E-value=1.4e-10  Score=91.01  Aligned_cols=149  Identities=14%  Similarity=0.168  Sum_probs=95.5

Q ss_pred             HhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCCCCC
Q psy17162          7 VFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      .+.|.|+.. +..+.- ++..++.+.+++..+++.+.+..                  ....|+|..-+.  -|..+++.
T Consensus         3 ~l~h~n~~~-f~g~~~-~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~--~hg~l~s~   78 (484)
T KOG1023|consen    3 QLDHDNLNK-FIGASV-DGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIG--YHGALKSS   78 (484)
T ss_pred             ccchhhhhh-heeeEe-cCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcce--eeeeeccc
Confidence            445555542 223333 33667788899999988885422                  123478776553  56666699


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCC---CCccchHHHHHHHHHHHHhCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSN---YDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~---~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      |++++..-.+|++|||+......... ........... |.|||.+........   .+.+.|+||+|++++|+++.+-|
T Consensus        79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~l-w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALL-WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             cceeeeeEEEEechhhhcccccccccccccchhHHHHh-ccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            99999999999999999876642100 00110112334 999999886321111   35679999999999999999999


Q ss_pred             CCCC---CCcHHHHHHHhh
Q psy17162        145 YDTW---GSPFEQLKQVVQ  160 (182)
Q Consensus       145 f~~~---~~~~~~~~~i~~  160 (182)
                      |...   ..+.+.+.++..
T Consensus       158 ~~~~~~~~~~~eii~~~~~  176 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKK  176 (484)
T ss_pred             cccccccCChHHHHHHHHh
Confidence            9751   123345555444

>KOG1165|consensus

Probab=99.15  E-value=3.3e-10  Score=84.01  Aligned_cols=137  Identities=16%  Similarity=0.149  Sum_probs=95.6

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEecc--CccchHHHHHH------H---------HHHHHHhhcchhcccccCCCC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGK--GEAEKVQKELE------T---------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~------~---------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      .++++..+-+..++.+.. ++..-++|++.  .+.++|++.+.      .         -+.+++|+.+++-   ||+||
T Consensus        77 YKlL~g~~GIP~vYYFGq-eG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIY---RDIKP  152 (449)
T KOG1165|consen   77 YKLLGGTEGIPQVYYFGQ-EGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIY---RDIKP  152 (449)
T ss_pred             HHHHcCCCCCCceeeecc-ccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceee---cccCc
Confidence            456666666666666665 44444456553  56677777531      1         1235677665555   55559


Q ss_pred             CcEEEcCCC-----eEEEeccCCCCCCCchhhhhc------ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         68 DTFHQRLQF-----LLHLFRFALSGNQDDLLIIRG------LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        68 ~nil~~~~~-----~~kl~dfg~a~~~~~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      +|+||...+     .+.++|||+|+...++.+...      ....||.. ||+-..-.+    ...+..-|+=|+|=++.
T Consensus       153 dNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTAR-YMSINTHlG----rEQSRRDDLEaLGHvFm  227 (449)
T KOG1165|consen  153 DNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTAR-YMSINTHLG----REQSRRDDLEALGHVFM  227 (449)
T ss_pred             cceeecCCCCCCCceEEEEeccchhhhcCccccccCcccccccccccee-eeEeecccc----chhhhhhhHHHhhhhhh
Confidence            999997543     478999999999877654211      11457777 999888777    67788899999999999


Q ss_pred             HHHhCCCCCCCCCC
Q psy17162        137 ELATGRFPYDTWGS  150 (182)
Q Consensus       137 ~l~~g~~pf~~~~~  150 (182)
                      +.+.|..||.|...
T Consensus       228 YFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  228 YFLRGSLPWQGLKA  241 (449)
T ss_pred             hhccCCCccccccC
Confidence            99999999998543

>KOG1164|consensus

Probab=99.10  E-value=2.7e-09  Score=81.02  Aligned_cols=90  Identities=18%  Similarity=0.077  Sum_probs=66.6

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCC-----CeEEEeccCCCC--CCCchh-----hhh--cccCCCCCCcccCccccCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQ-----FLLHLFRFALSG--NQDDLL-----IIR--GLYGADCDPNFIRPERIDPS  116 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~-----~~~kl~dfg~a~--~~~~~~-----~~~--~~~~~~~~~~~~aPe~~~~~  116 (182)
                      ++|+.+++|   ||+||.|+++...     ..+.+.|||+++  ......     ..+  ...+.||.. |+++.+-.+ 
T Consensus       137 ~lH~~G~iH---RDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~r-y~S~~~H~~-  211 (322)
T KOG1164|consen  137 DLHSKGFIH---RDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLR-YASINVHLG-  211 (322)
T ss_pred             HHHhcCccc---CCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccc-cccHHHhCC-
Confidence            566555555   5555999999765     468999999998  321111     110  122558888 999998877 


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162        117 GNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus       117 ~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                         ...+.+.|+||++-++.++..|..||.+.
T Consensus       212 ---~e~~r~DDles~~Y~l~el~~g~LPW~~~  240 (322)
T KOG1164|consen  212 ---IEQGRRDDLESLFYMLLELLKGSLPWEAL  240 (322)
T ss_pred             ---CccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence               77889999999999999999999999773

>KOG1290|consensus

Probab=99.08  E-value=1.5e-10  Score=89.38  Aligned_cols=76  Identities=16%  Similarity=0.319  Sum_probs=56.1

Q ss_pred             CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC-----CCC
Q psy17162         76 FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT-----WGS  150 (182)
Q Consensus        76 ~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~-----~~~  150 (182)
                      -.|||+|||-|...-...+    .-+-|.- |+|||++.+    ..|+..+||||++|+++||.||...|..     ...
T Consensus       391 i~vKIaDlGNACW~~khFT----~DIQTRQ-YRapEVllG----sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~r  461 (590)
T KOG1290|consen  391 IRVKIADLGNACWVHKHFT----EDIQTRQ-YRAPEVLLG----SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSR  461 (590)
T ss_pred             eeEEEeeccchhhhhhhhc----hhhhhhh-ccCcceeec----CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCc
Confidence            4689999999877433222    0112233 999999999    8999999999999999999999988853     334


Q ss_pred             cHHHHHHHhh
Q psy17162        151 PFEQLKQVVQ  160 (182)
Q Consensus       151 ~~~~~~~i~~  160 (182)
                      +.+-+.+|+.
T Consensus       462 DEDHiA~i~E  471 (590)
T KOG1290|consen  462 DEDHIALIME  471 (590)
T ss_pred             cHHHHHHHHH
Confidence            5555555543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.00  E-value=4.1e-10  Score=80.86  Aligned_cols=115  Identities=10%  Similarity=0.009  Sum_probs=68.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecC-------CCceEEEeccCccchHHHHHH------HHHHHHHhhcchhcccccCCCCCcE
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD-------DKKVVLVTGKGEAEKVQKELE------TLRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~------~~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      .+..+.|+++... .+.....       ....+++||+..+.++.+...      ......+...|..+..|+|++|.|+
T Consensus        88 ~l~rL~~~GI~~~-~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Ni  166 (232)
T PRK10359         88 QTDRVRSEGLASL-NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNF  166 (232)
T ss_pred             HHHHHHHCCCCcc-eEeeeecccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHE
Confidence            3555666655432 3332211       235678999999888866321      0112233333333445556669999


Q ss_pred             EEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         71 HQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      +++.+| ++++|||..........  .            ......    ..++.++|+||+|+++...
T Consensus       167 li~~~g-i~liDfg~~~~~~e~~a--~------------d~~vle----r~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        167 IVSKNG-LRIIDLSGKRCTAQRKA--K------------DRIDLE----RHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             EEeCCC-EEEEECCCcccccchhh--H------------HHHHHH----hHhcccccccceeEeehHH
Confidence            999888 99999998765432211  0            012223    4566789999999887654

>KOG1163|consensus

Probab=98.95  E-value=1.7e-09  Score=77.15  Aligned_cols=92  Identities=18%  Similarity=0.205  Sum_probs=68.1

Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCC---CeEEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCC
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQ---FLLHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNP  119 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~  119 (182)
                      .+|+|..+++|+|++   |+|+|..-+   ..+-++|||+|+...+..+..      .....||.. |++-....+    
T Consensus       124 iEyvH~r~fiHRDIK---PdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaR-YASinAh~g----  195 (341)
T KOG1163|consen  124 IEYVHLRNFIHRDIK---PDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTAR-YASINAHLG----  195 (341)
T ss_pred             HHHHHhhccccccCC---ccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeee-ehhhhhhhh----
Confidence            357777766666555   999998654   457899999998876543311      112456777 888777666    


Q ss_pred             CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162        120 SNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus       120 ~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      ...+...|+=|+|-++.+.-.|..||++.
T Consensus       196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQgl  224 (341)
T KOG1163|consen  196 IEQSRRDDMESVGYVLMYFNRGSLPWQGL  224 (341)
T ss_pred             hhhhhhhhhhhhcceeeeeecCCCccccc
Confidence            45668889999999999999999999984

>KOG1240|consensus

Probab=98.93  E-value=1.2e-09  Score=91.76  Aligned_cols=93  Identities=18%  Similarity=0.156  Sum_probs=60.1

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCC--CchhhhhcccCC---CCCCcccCccccCCC------CCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQ--DDLLIIRGLYGA---DCDPNFIRPERIDPS------GNP  119 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~--~~~~~~~~~~~~---~~~~~~~aPe~~~~~------~~~  119 (182)
                      -+|..++||.|   +|.+|||++.=.++-|+||..-+..  +...+...+-+.   +...+|.|||.+...      ...
T Consensus       135 qcH~~gVcHGD---IKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~  211 (1431)
T KOG1240|consen  135 QCHKLGVCHGD---IKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQD  211 (1431)
T ss_pred             HHHHcCccccc---cccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCc
Confidence            45555555555   5599999999999999999754431  111110011011   111249999987641      111


Q ss_pred             CC-CCccchHHHHHHHHHHHHh-CCCCCC
Q psy17162        120 SN-YDIRSDVWSLGISLIELAT-GRFPYD  146 (182)
Q Consensus       120 ~~-~~~~~Diwslg~~l~~l~~-g~~pf~  146 (182)
                      .+ ..++-||+|+||++.|+++ |++||.
T Consensus       212 ~~~L~paMDIFS~GCViaELf~Eg~PlF~  240 (1431)
T KOG1240|consen  212 APLLTPAMDIFSAGCVIAELFLEGRPLFT  240 (1431)
T ss_pred             ccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence            22 5678899999999999988 899995

>KOG1166|consensus

Probab=98.85  E-value=6.8e-09  Score=87.33  Aligned_cols=110  Identities=15%  Similarity=0.057  Sum_probs=75.5

Q ss_pred             EEEeccCccchHHHHHH--------------HHHHHHHhhcchhcccccCCCCCcEEEcCC-------CeEEEeccCCCC
Q psy17162         29 VLVTGKGEAEKVQKELE--------------TLRCIYIQDYHLCVRSTRYFSVDTFHQRLQ-------FLLHLFRFALSG   87 (182)
Q Consensus        29 ~~~~~~~~~~~l~~~l~--------------~~~~~~l~~~~~~h~~~~~lk~~nil~~~~-------~~~kl~dfg~a~   87 (182)
                      +++++|...++|.+.+.              ...+..+..+|-+++.|.||||+|+++...       ..++|+|||.+-
T Consensus       770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            46777777777777432              222334444444455555666999999532       358999999986


Q ss_pred             CCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         88 NQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ..+.-.. .+-...+++.. +-++|...+    .+++.++|.+.++.+++.|+.|+.
T Consensus       850 Dm~lfp~~~~F~~~~~td~-f~C~EM~~g----rpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  850 DMKLFPDGTKFKAVWHTDL-FDCIEMREG----RPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eeeEcCCCcEEeeeecccc-chhHHHhcC----CCCchhhhhHHHHHHHHHHHHHHH
Confidence            5432211 01122456677 999999999    899999999999999999999863

>KOG0590|consensus

Probab=98.84  E-value=5.8e-10  Score=90.72  Aligned_cols=83  Identities=24%  Similarity=0.297  Sum_probs=66.6

Q ss_pred             ccccCCCCCcEEEcCCC-eEEEeccCCCCCCCc-hhh-hhcccCCC-CCCcccCccccCCCCCCCCC-CccchHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQF-LLHLFRFALSGNQDD-LLI-IRGLYGAD-CDPNFIRPERIDPSGNPSNY-DIRSDVWSLGIS  134 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~-~~kl~dfg~a~~~~~-~~~-~~~~~~~~-~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~  134 (182)
                      ..|+++||+|.+++..+ .++++|||+|..... ... ......+| ++. |+|||...+    ..+ ....|+||.|++
T Consensus       145 ~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~-y~a~E~~~~----~~~~~~~~d~~S~g~~  219 (601)
T KOG0590|consen  145 VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPP-YGAPEHLSG----KAYRGPSVDVWSLGIV  219 (601)
T ss_pred             cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCC-CCCcccccc----hhhcCCCccccccccc
Confidence            55666779999999999 999999999988765 222 12233677 888 999999887    334 478999999999


Q ss_pred             HHHHHhCCCCCCC
Q psy17162        135 LIELATGRFPYDT  147 (182)
Q Consensus       135 l~~l~~g~~pf~~  147 (182)
                      +..+++|..|+..
T Consensus       220 l~~~~~g~~p~~~  232 (601)
T KOG0590|consen  220 LSAMLTGELPWDF  232 (601)
T ss_pred             ccccccCCCCccc
Confidence            9999999999865

>KOG0606|consensus

Probab=98.61  E-value=1.1e-07  Score=80.00  Aligned_cols=147  Identities=20%  Similarity=0.227  Sum_probs=98.1

Q ss_pred             CCCceEEEeccCccchHHHHHH--------------H---HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCC
Q psy17162         24 DDKKVVLVTGKGEAEKVQKELE--------------T---LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALS   86 (182)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~~~l~--------------~---~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a   86 (182)
                      .....++++++..++++..-|.              .   ...++||...   +.|++++|.|.++..+++.++.+||..
T Consensus       875 ~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  875 CRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTL  951 (1205)
T ss_pred             CCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccc
Confidence            4455667777665555444321              1   1234555555   455555599999999999999999733


Q ss_pred             CCCCc------h-------------------hh-----hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         87 GNQDD------L-------------------LI-----IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        87 ~~~~~------~-------------------~~-----~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      ...+.      .                   ..     .......+++. |.+||...+    ......+|+|+.|+.++
T Consensus       952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~-~laPe~~lg----~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen  952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPD-YLAPEILLG----RRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred             cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCc-ccCCccccc----ccCCCcchhhhhhhhhh
Confidence            22110      0                   00     00112467777 999999998    78889999999999999


Q ss_pred             HHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhh
Q psy17162        137 ELATGRFPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFIT  180 (182)
Q Consensus       137 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~  180 (182)
                      +.++|.+||.. ..+......|..+. .+.|  +...+.++++++.
T Consensus      1027 e~l~g~pp~na-~tpq~~f~ni~~~~-~~~p~g~~~~s~~aq~~~~ 1070 (1205)
T KOG0606|consen 1027 EVLTGIPPFNA-ETPQQIFENILNRD-IPWPEGPEEGSYEAQDLIN 1070 (1205)
T ss_pred             hhhcCCCCCCC-cchhhhhhccccCC-CCCCCCccccChhhhhhhh
Confidence            99999999988 46656666665553 3333  4567888888765

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.40  E-value=1.4e-06  Score=63.53  Aligned_cols=58  Identities=9%  Similarity=0.016  Sum_probs=38.8

Q ss_pred             EEeccCcc-chHHHHHH----------H--HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCC
Q psy17162         30 LVTGKGEA-EKVQKELE----------T--LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQD   90 (182)
Q Consensus        30 ~~~~~~~~-~~l~~~l~----------~--~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~   90 (182)
                      +++++..+ .++.+.+.          .  ....++|+.+++|+   |+||.||+++.++.++|+|||.+....
T Consensus       123 lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~Hr---Dlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        123 ILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHA---DLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             EEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCC---CCCchhEEEcCCCCEEEEECCCcccCC
Confidence            77777665 45544321          1  11236666665555   555999999998999999999886644

>PRK10345 hypothetical protein; Provisional

Probab=98.34  E-value=2.7e-06  Score=60.73  Aligned_cols=73  Identities=10%  Similarity=-0.033  Sum_probs=44.6

Q ss_pred             CCCCcEEEEEEeeecCC--CceE-EEecc--CccchHHHHHH----------------HHHHHHHhhcchhcccccCCCC
Q psy17162          9 NQDEIGVTVSSVKTTDD--KKVV-LVTGK--GEAEKVQKELE----------------TLRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~--~~~~~l~~~l~----------------~~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      .++| ++.+++..+.+.  +.++ .++++  ...++|.+.+.                ++ ..|+|+.+++|+|   +||
T Consensus        59 ~h~n-Ivr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l-~~yLh~~~IvhrD---lKp  133 (210)
T PRK10345         59 DWSG-IPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKL-KRYLLDNRIVTME---LKP  133 (210)
T ss_pred             CCcc-cceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHH-HHHHHHCCEeecC---CCH
Confidence            3455 456666665543  3445 57888  34556655432                22 2477777655555   559


Q ss_pred             CcEEEcCC----CeEEEeccCCC
Q psy17162         68 DTFHQRLQ----FLLHLFRFALS   86 (182)
Q Consensus        68 ~nil~~~~----~~~kl~dfg~a   86 (182)
                      +||+++..    +.++|+|++.+
T Consensus       134 ~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        134 QNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHEEEeccCCCCCcEEEEECCCC
Confidence            99999742    47999995444

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.33  E-value=1e-06  Score=62.31  Aligned_cols=38  Identities=5%  Similarity=-0.188  Sum_probs=29.4

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCc
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDD   91 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~   91 (182)
                      ++|..+   +.|+|++|.||+++.++.++|+|||.+.....
T Consensus       140 ~lh~~g---i~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         140 KAYKHG---IIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             HHHHCC---CCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            566655   45555669999999999999999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.29  E-value=2.2e-06  Score=69.55  Aligned_cols=81  Identities=14%  Similarity=0.119  Sum_probs=53.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------H--HHHHHHhhcchhcccccCCCCCcEEEcC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------T--LRCIYIQDYHLCVRSTRYFSVDTFHQRL   74 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------~--~~~~~l~~~~~~h~~~~~lk~~nil~~~   74 (182)
                      +++.++++++..... +.. +....++++|+..+.++.+.+.       .  ....++|+.+++|+|   +||+||++ .
T Consensus       389 ~l~~l~~~~i~~p~~-~~~-~~~~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrD---lkp~NILl-~  462 (535)
T PRK09605        389 LLSEARRAGVPTPVI-YDV-DPEEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGD---LTTSNFIV-R  462 (535)
T ss_pred             HHHhhcccCCCeeEE-EEE-eCCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCC---CChHHEEE-E
Confidence            566677776543221 222 3345678999998888877542       1  113477777665555   55999999 5


Q ss_pred             CCeEEEeccCCCCCCC
Q psy17162         75 QFLLHLFRFALSGNQD   90 (182)
Q Consensus        75 ~~~~kl~dfg~a~~~~   90 (182)
                      ++.++|+|||+++...
T Consensus       463 ~~~~~liDFGla~~~~  478 (535)
T PRK09605        463 DDRLYLIDFGLGKYSD  478 (535)
T ss_pred             CCcEEEEeCcccccCC
Confidence            7889999999986643

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.26  E-value=1.1e-06  Score=61.86  Aligned_cols=31  Identities=13%  Similarity=-0.059  Sum_probs=24.6

Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCC
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQD   90 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~   90 (182)
                      ++.|+|+||+||+++ ++.++|+|||+|....
T Consensus       138 giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~  168 (190)
T cd05147         138 RLVHADLSEYNLLYH-DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             CcccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence            455666669999998 5789999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.23  E-value=1.6e-06  Score=60.99  Aligned_cols=37  Identities=5%  Similarity=-0.179  Sum_probs=28.6

Q ss_pred             HHhh-cchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCc
Q psy17162         51 YIQD-YHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDD   91 (182)
Q Consensus        51 ~l~~-~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~   91 (182)
                      ++|. .   ++.|+|+||+||+++ ++.++|+|||++.....
T Consensus       132 ~lH~~~---givHrDlkP~NIll~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         132 RLYQEA---GLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             HHHHhC---CEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence            5555 4   455666669999999 89999999999876544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.22  E-value=4.5e-06  Score=59.41  Aligned_cols=61  Identities=10%  Similarity=0.089  Sum_probs=42.3

Q ss_pred             CCceEEEeccCccchHHHHHHH-----------H--HHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         25 DKKVVLVTGKGEAEKVQKELET-----------L--RCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        25 ~~~~~~~~~~~~~~~l~~~l~~-----------~--~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      ....+++|++..+.++.+.+..           +  .+.++|..++   .|+|++|.||+++ ++.++++|||.+...
T Consensus        71 ~~~~~lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879         71 PENFIIVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGI---IHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             CCCCEEEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCc---ccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            3456788898888777654421           1  1235555554   5556669999999 788999999988653

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.14  E-value=7.7e-06  Score=57.65  Aligned_cols=61  Identities=13%  Similarity=0.096  Sum_probs=42.9

Q ss_pred             CCceEEEeccCccchHHHHHHH----------HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         25 DKKVVLVTGKGEAEKVQKELET----------LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        25 ~~~~~~~~~~~~~~~l~~~l~~----------~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      ....++++++..+.++.+.+..          ....++|..+++|.|   ++|+||+++ ++.+++.|||.+...
T Consensus        69 ~~~~~lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~D---l~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        69 PDNKTIVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGD---LTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CCCCEEEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCC---CCcceEEEE-CCcEEEEECCCCcCC
Confidence            3445788898888777654321          112467776665555   459999999 889999999988664

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.12  E-value=6.6e-06  Score=65.10  Aligned_cols=87  Identities=10%  Similarity=-0.031  Sum_probs=54.9

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------------HHHHHHHhhcchhcccccCCCCCcEE
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------------TLRCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------------~~~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      .+.|++.+.+. +..+...-...-+++||+..+.++.+...             .+...+++..+..+..|+|++|.||+
T Consensus       211 ~~~~~~~~~v~-vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNil  289 (437)
T TIGR01982       211 GENFKNDPGVY-VPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIF  289 (437)
T ss_pred             HHhcCCCCCEE-eCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEE
Confidence            34455555543 33333222233578888888776654321             11122444455555677778899999


Q ss_pred             EcCCCeEEEeccCCCCCCCch
Q psy17162         72 QRLQFLLHLFRFALSGNQDDL   92 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~   92 (182)
                      ++.++.++++|||++......
T Consensus       290 v~~~g~i~liDfG~~~~l~~~  310 (437)
T TIGR01982       290 VLKDGKIIALDFGIVGRLSEE  310 (437)
T ss_pred             ECCCCcEEEEeCCCeeECCHH
Confidence            999999999999999877643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.08  E-value=8.2e-06  Score=56.90  Aligned_cols=37  Identities=5%  Similarity=-0.155  Sum_probs=28.4

Q ss_pred             HHhh-cchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCc
Q psy17162         51 YIQD-YHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDD   91 (182)
Q Consensus        51 ~l~~-~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~   91 (182)
                      ++|. .+   +.|+|++|+||+++ ++.++++|||.+.....
T Consensus       129 ~lh~~~~---ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         129 KLYREAG---LVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             HHhhccC---cCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence            5555 44   45666779999999 89999999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1243|consensus

Probab=98.04  E-value=1.6e-05  Score=64.38  Aligned_cols=122  Identities=20%  Similarity=0.235  Sum_probs=75.7

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccch--------------HHHHHHHHHHHHHh-hcchhcccccCCCCCc
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEK--------------VQKELETLRCIYIQ-DYHLCVRSTRYFSVDT   69 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------l~~~l~~~~~~~l~-~~~~~h~~~~~lk~~n   69 (182)
                      ++.++|++++-.+.....  .+.+|+++|....-.              +.|.+.++.  +|| ..++.|..++   -..
T Consensus        63 lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~Pl~~~lk~l~~~~v~~Gl~qIl~AL~--FL~~d~~lvHgNv~---~~S  135 (690)
T KOG1243|consen   63 LKTLRHPNILSYLDTTEE--EGTLYLVTERVRPLETVLKELGKEEVCLGLFQILAALS--FLNDDCNLVHGNVC---KDS  135 (690)
T ss_pred             hhhccCchhhhhhhhhcc--cCceEEEeeccccHHHHHHHhHHHHHHHHHHHHHHHHH--HHhccCCeeeccEe---eee
Confidence            567899999866555544  336788888644333              122334444  664 3455555544   889


Q ss_pred             EEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         70 FHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        70 il~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+++..|.-||.+|.+.......... .. .......|..|+....    .  .-..|.|-|||++++++.|
T Consensus       136 VfVn~~GeWkLggle~v~~~~~~~~~-~~-~~~~~~s~~~P~~~~~----s--~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  136 VFVNESGEWKLGGLELVSKASGFNAP-AK-SLYLIESFDDPEEIDP----S--EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             EEEcCCCcEEEeeeEEEeccccCCcc-cc-cchhhhcccChhhcCc----c--ccchhhhhHHHHHHHHhCc
Confidence            99999999999999876443322210 01 1111111566654433    1  1467999999999999999

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.00  E-value=2.5e-05  Score=60.61  Aligned_cols=93  Identities=14%  Similarity=0.103  Sum_probs=62.8

Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCC-CCCCccch
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNP-SNYDIRSD  127 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~~~~D  127 (182)
                      .+.||+.+....|   ++++|+|++.++.|.|.|-..- .+..+.....+ .+|... |++||...-.... ...+...|
T Consensus       130 FA~lH~~Gh~vGD---Vn~~~~lVsd~~~V~LVdsDsf-qi~~ng~~~~c-pVg~~e-ftPPElQ~~~sf~g~~r~~~hD  203 (637)
T COG4248         130 FATLHEHGHVVGD---VNQNSFLVSDDSKVVLVDSDSF-QINANGTLHLC-PVGVSE-FTPPELQTLPSFVGFERTANHD  203 (637)
T ss_pred             HHHHHhcCCcccc---cCccceeeecCceEEEEcccce-eeccCCceEec-ccCccc-cCCHHHhccccccccCCCcccc
Confidence            3467777655445   4499999999999999974322 22222222233 567777 9999976521111 23345679


Q ss_pred             HHHHHHHHHHHHhC-CCCCCC
Q psy17162        128 VWSLGISLIELATG-RFPYDT  147 (182)
Q Consensus       128 iwslg~~l~~l~~g-~~pf~~  147 (182)
                      .+.||+++++++.| ..||+|
T Consensus       204 ~FGLavLiF~lL~ggrHPysG  224 (637)
T COG4248         204 NFGLAVLIFHLLFGGRHPYSG  224 (637)
T ss_pred             chhHHHHHHHHHhcCCCCCCc
Confidence            99999999999875 999987

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.97  E-value=3.5e-05  Score=51.21  Aligned_cols=65  Identities=12%  Similarity=0.012  Sum_probs=43.9

Q ss_pred             CceEEEeccCccchHH-----H---HHHH--HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCC
Q psy17162         26 KKVVLVTGKGEAEKVQ-----K---ELET--LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQD   90 (182)
Q Consensus        26 ~~~~~~~~~~~~~~l~-----~---~l~~--~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~   90 (182)
                      ...++++++..+..+.     .   ....  .....+|..+.....|+|++|+|++++..+.+++.|||.+....
T Consensus        66 ~~~~~v~e~~~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          66 GWSYLLMEWIEGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             CccEEEEEecCCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            4567788876655442     1   1111  11336777654556777888999999988999999999886543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00090 RIO RIO-like kinase

Probab=97.89  E-value=1.3e-05  Score=58.27  Aligned_cols=38  Identities=8%  Similarity=-0.136  Sum_probs=28.1

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCc
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDD   91 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~   91 (182)
                      ++|..+  .+.|+|+||+||+++ ++.++|+|||.+.....
T Consensus       163 ~LH~~g--~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      163 KLYKEG--ELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             HHHhcC--CEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence            566555  045556669999999 88999999998865433

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.73  E-value=0.00011  Score=50.26  Aligned_cols=79  Identities=15%  Similarity=0.087  Sum_probs=46.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH-----------HHHHHHHHHHhhcch--hcccccCCCCCcE
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK-----------ELETLRCIYIQDYHL--CVRSTRYFSVDTF   70 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~l~~~~~~~l~~~~~--~h~~~~~lk~~ni   70 (182)
                      +++.+.+..++..+..... +  .-++++++..+..+.+           ....  ...+|....  ....|+|++|.||
T Consensus        45 ~l~~l~~~~~~P~~~~~~~-~--~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~--l~~LH~~~~~~~~~~HgD~~~~Ni  119 (170)
T cd05151          45 NSKLAAEAGIGPKLYYFDP-E--TGVLITEFIEGSELLTEDFSDPENLEKIAKL--LKKLHSSPLPDLVPCHNDLLPGNF  119 (170)
T ss_pred             HHHHHHHhCCCCceEEEeC-C--CCeEEEEecCCCccccccccCHHHHHHHHHH--HHHHhCCCCCCceeecCCCCcCcE
Confidence            4445544444444433332 1  2356777766655432           1222  236777653  1135666779999


Q ss_pred             EEcCCCeEEEeccCCCCC
Q psy17162         71 HQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~   88 (182)
                      +++ ++.++++|||.+..
T Consensus       120 l~~-~~~~~liDf~~a~~  136 (170)
T cd05151         120 LLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             EEE-CCeEEEEecccccC
Confidence            999 67899999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601|consensus

Probab=97.69  E-value=2.8e-05  Score=61.99  Aligned_cols=91  Identities=14%  Similarity=0.062  Sum_probs=70.2

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCC-CeEEEeccCCCCCCCchhhhh----cccCCCCCCcccCccccCCCCCCCCCCcc
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIR----GLYGADCDPNFIRPERIDPSGNPSNYDIR  125 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~----~~~~~~~~~~~~aPe~~~~~~~~~~~~~~  125 (182)
                      .++..|..+..|.++||.|+....+ ..+++.|||+...+..+....    ..+..+... |++||...+     .++..
T Consensus       234 al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~-Y~~ke~~~~-----l~~~~  307 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCI-YAAKELLNG-----LATFA  307 (524)
T ss_pred             cccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCce-EeChhhhcc-----ccchH
Confidence            5666777788889999999999999 888999999887766554211    111245556 999999875     67889


Q ss_pred             chHHHHHHHHHHHHhCCCCCCC
Q psy17162        126 SDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       126 ~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      .|++++|.++.+..++..++..
T Consensus       308 ~di~sl~ev~l~~~l~~~~~~~  329 (524)
T KOG0601|consen  308 SDIFSLGEVILEAILGSHLPSV  329 (524)
T ss_pred             hhhcchhhhhHhhHhhcccccC
Confidence            9999999999998887766543

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.64  E-value=0.00016  Score=58.53  Aligned_cols=87  Identities=13%  Similarity=0.054  Sum_probs=55.4

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--HHH-------H----HHHHHhhcchhcccccCCCCCcEE
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--LET-------L----RCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--l~~-------~----~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      .+.|.+.+.+ .+..+...-...-+++||+..+.++.+.  +.+       +    ...++...-.-+..|+|++|.||+
T Consensus       214 ~~~f~~~~~v-~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIl  292 (537)
T PRK04750        214 RRNFEDSDML-YVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIF  292 (537)
T ss_pred             HHHccCCCCe-ecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeE
Confidence            3445555443 4444443333456789999998888652  211       1    112333333345678888899999


Q ss_pred             EcCCC----eEEEeccCCCCCCCch
Q psy17162         72 QRLQF----LLHLFRFALSGNQDDL   92 (182)
Q Consensus        72 ~~~~~----~~kl~dfg~a~~~~~~   92 (182)
                      ++.++    .+++.|||....+...
T Consensus       293 v~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        293 VSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             EecCCCCCCeEEEEecceEEECCHH
Confidence            99888    9999999998776543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.60  E-value=0.00026  Score=49.18  Aligned_cols=67  Identities=13%  Similarity=0.047  Sum_probs=46.2

Q ss_pred             EeeecCCCceEEEeccCccchHHHHHHHH----------HHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         19 SVKTTDDKKVVLVTGKGEAEKVQKELETL----------RCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      .+...+...-.++|++..+..+.+.+...          ...-+|..+++|.|+-   ++|++++.++ +.++|||++..
T Consensus        65 ~v~dvD~~~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLT---tsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          65 IVYDVDPDNGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLT---TSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             eEEEEcCCCCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCc---cceEEEeCCc-EEEEECCcccc
Confidence            33444555567888998888888765433          1234666666665555   9999998665 89999999865


Q ss_pred             C
Q psy17162         89 Q   89 (182)
Q Consensus        89 ~   89 (182)
                      .
T Consensus       141 s  141 (204)
T COG3642         141 S  141 (204)
T ss_pred             c
Confidence            3

>KOG2137|consensus

Probab=97.36  E-value=7.9e-05  Score=60.72  Aligned_cols=90  Identities=14%  Similarity=0.055  Sum_probs=60.7

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hh--ccc-----CCCCCCcccCccccCCCCCCCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IR--GLY-----GADCDPNFIRPERIDPSGNPSNY  122 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~--~~~-----~~~~~~~~~aPe~~~~~~~~~~~  122 (182)
                      ++|...  ..+|..+.|++|.+++.+..|++.|+++.....+.. .+  ...     ..-... |.|||.+..    ...
T Consensus       114 flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~-f~apE~~~~----~~~  186 (700)
T KOG2137|consen  114 FLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLN-FLAPEYLLG----TTN  186 (700)
T ss_pred             hhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcc-cccchhhcc----ccc
Confidence            555431  234555569999999999999999987644333111 00  000     011233 999999987    566


Q ss_pred             CccchHHHHHHHHHHHH-hCCCCCCC
Q psy17162        123 DIRSDVWSLGISLIELA-TGRFPYDT  147 (182)
Q Consensus       123 ~~~~Diwslg~~l~~l~-~g~~pf~~  147 (182)
                      ..++|++|+|+.+|.+. .|+.-+.+
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a  212 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAA  212 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhc
Confidence            78999999999999988 57766655

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.52  E-value=0.0065  Score=42.65  Aligned_cols=33  Identities=9%  Similarity=-0.068  Sum_probs=22.0

Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      |.+++.|.|+++.||+++.+ .+.++|||.+...
T Consensus       124 ~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  124 HKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             HCTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             HhcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence            34455556666999999977 8999999977543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=96.48  E-value=0.0036  Score=44.26  Aligned_cols=30  Identities=7%  Similarity=-0.164  Sum_probs=22.8

Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      +..|.|+++.||+++ ++.+.++|||.+-..
T Consensus       145 glVHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         145 NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            445555669999997 578999999977543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.35  E-value=0.0085  Score=43.06  Aligned_cols=60  Identities=12%  Similarity=-0.090  Sum_probs=37.4

Q ss_pred             eEEEeccCccchHHHH------HHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         28 VVLVTGKGEAEKVQKE------LETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        28 ~~~~~~~~~~~~l~~~------l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      .++++||.++..+.+.      +.....+.+...|..+..|.|..|.|++++.+ .+++.||+..+.
T Consensus       118 ~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~~  183 (229)
T PF06176_consen  118 YVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKRM  183 (229)
T ss_pred             EEEEEEEecCeecccchhcCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECccccc
Confidence            3478888777765431      11112234444444455566666999999854 499999986644

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0576|consensus

Probab=95.87  E-value=0.0057  Score=50.25  Aligned_cols=131  Identities=15%  Similarity=0.097  Sum_probs=79.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceE-EEeccCccc-hHHH-------------H--HHHHHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVV-LVTGKGEAE-KVQK-------------E--LETLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~-------------~--l~~~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++|...+++|-+  +.++...+.+.+. +.++++..+ +...             +  +.......+++.+..-..|+| 
T Consensus       285 eLLdK~n~P~~~--v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d-  361 (829)
T KOG0576|consen  285 ELLDKVNNPNPV--VRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD-  361 (829)
T ss_pred             HHHHHccCCCCc--ccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc-
Confidence            567888888832  3355554444444 455665544 1111             0  111111122222222233332 


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                         ||+.+ .+..+..+|+....+.....  .....+++. +++||+...    ..+....|.|+++.-..++.-|-+|-
T Consensus       362 ---~~l~s-~~~~~~~~~~v~~~L~~~~~--~~t~~~~~~-~~~pev~~~----~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  362 ---NILGS-EEEVKLLDFAVPPQLTRTMK--PRTAIGTPE-PLAPEVIQE----NTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             ---ccccc-ccccccccccCCcccCcccc--cccCCCCCC-CCCchhhcc----cccccCCCccCCCcchhhcCCCCCCC
Confidence               55554 37789999998877665432  233678888 999999887    78889999999998888888787776


Q ss_pred             CC
Q psy17162        146 DT  147 (182)
Q Consensus       146 ~~  147 (182)
                      ..
T Consensus       431 ~~  432 (829)
T KOG0576|consen  431 SS  432 (829)
T ss_pred             CC
Confidence            43

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.75  E-value=0.019  Score=40.89  Aligned_cols=36  Identities=6%  Similarity=-0.082  Sum_probs=26.3

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCC---eEEEeccCCCCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQF---LLHLFRFALSGNQ   89 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~---~~kl~dfg~a~~~   89 (182)
                      -+|..+++|   +|+++.|||++.++   .+.++||+.+...
T Consensus       133 ~lH~~gi~H---~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  133 KLHDAGIYH---GDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHCcCCC---CCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            455555555   55559999999887   7899999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601|consensus

Probab=95.37  E-value=0.0069  Score=48.70  Aligned_cols=86  Identities=15%  Similarity=0.021  Sum_probs=56.3

Q ss_pred             HHhhcchhc---ccccCCCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcc-cCccccCCCCCCCCCCcc
Q psy17162         51 YIQDYHLCV---RSTRYFSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNF-IRPERIDPSGNPSNYDIR  125 (182)
Q Consensus        51 ~l~~~~~~h---~~~~~lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~-~aPe~~~~~~~~~~~~~~  125 (182)
                      .+-+++.+|   ..|.|++|+||++..+ +..++.|||++..+.-...    ........| .++.....    ..+..+
T Consensus       375 ~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~----~~~~~~r~~p~~~~~~e~----~~~~~~  446 (524)
T KOG0601|consen  375 ILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG----VFHHIDRLYPIAEILLED----YPHLSK  446 (524)
T ss_pred             HHhccccccchhhhcccccccceeeccchhhhhccccccccccceecc----cccccccccccchhhccc----cccccc
Confidence            344444444   5678888999999886 7789999998864322211    122222213 24444444    677799


Q ss_pred             chHHHHHHHHHHHHhCCCC
Q psy17162        126 SDVWSLGISLIELATGRFP  144 (182)
Q Consensus       126 ~Diwslg~~l~~l~~g~~p  144 (182)
                      +|++|+|....+..++.+-
T Consensus       447 ~~~~sl~~~~~e~~~~~~l  465 (524)
T KOG0601|consen  447 ADIFSLGLSVDEAITGSPL  465 (524)
T ss_pred             cccccccccccccccCccc
Confidence            9999999999998887643

>KOG3087|consensus

Probab=95.31  E-value=0.035  Score=38.97  Aligned_cols=36  Identities=17%  Similarity=0.105  Sum_probs=26.4

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCC---eEEEeccCCCCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQF---LLHLFRFALSGNQ   89 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~---~~kl~dfg~a~~~   89 (182)
                      -+|..+++|.|+-   .+||++..++   .+.++|||++...
T Consensus       128 klH~ndiiHGDLT---TSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  128 KLHDNDIIHGDLT---TSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             HhhhCCeeccccc---ccceEEecCCCcCceEEEeecchhcc
Confidence            5666666666555   9999997765   3589999998654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=95.26  E-value=0.035  Score=41.28  Aligned_cols=35  Identities=11%  Similarity=0.097  Sum_probs=25.6

Q ss_pred             HHhhcchhcccccCCCCCcEEEcC-------CCeEEEeccCCCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRL-------QFLLHLFRFALSGN   88 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~-------~~~~kl~dfg~a~~   88 (182)
                      -+|..+++|.|+.   ++||+++.       +..+.++||+.+..
T Consensus       153 ~LH~~Gi~HgDL~---~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        153 DMHAAGINHRDCY---ICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHCcCccCCCC---hhhEEEeccccCCCCCceEEEEECCcccc
Confidence            4666665555555   99999975       46789999997743

>KOG1290|consensus

Probab=94.76  E-value=0.053  Score=43.25  Aligned_cols=60  Identities=12%  Similarity=0.060  Sum_probs=33.0

Q ss_pred             CcEEEEEEeeec---CCCceEEEeccCccch--------------------HHHHHHHHHHHHHhhcchhcccccCCCCC
Q psy17162         12 EIGVTVSSVKTT---DDKKVVLVTGKGEAEK--------------------VQKELETLRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus        12 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--------------------l~~~l~~~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      +.|+.+.|.+..   .+..+.+|+|+.-..-                    ..|.|.++.  |||..  |.+.|-||||+
T Consensus       142 ~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLd--YLH~e--cgIIHTDlKPE  217 (590)
T KOG1290|consen  142 KCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLD--YLHRE--CGIIHTDLKPE  217 (590)
T ss_pred             ceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH--HHHHh--cCccccCCCcc
Confidence            356666655543   3355667877632211                    112234444  78762  34455556699


Q ss_pred             cEEEcCC
Q psy17162         69 TFHQRLQ   75 (182)
Q Consensus        69 nil~~~~   75 (182)
                      |||+...
T Consensus       218 NvLl~~~  224 (590)
T KOG1290|consen  218 NVLLCST  224 (590)
T ss_pred             eeeeecc
Confidence            9998644

>KOG1826|consensus

Probab=94.67  E-value=0.0056  Score=55.24  Aligned_cols=133  Identities=11%  Similarity=0.050  Sum_probs=85.3

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-HH---------HHHH-----Hhhcchhc--------ccccC
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-TL---------RCIY-----IQDYHLCV--------RSTRY   64 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~---------~~~~-----l~~~~~~h--------~~~~~   64 (182)
                      ..|.++.+....+-..+....+..+++.+.+++...+- ++         .+--     +.....||        ..+++
T Consensus      1286 ~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~ 1365 (2724)
T KOG1826|consen 1286 AKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKS 1365 (2724)
T ss_pred             hhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhh
Confidence            34444444434444445555667777777777777541 11         0001     11222222        24678


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +|+-|.++..+..+++.++|+.+........... ..+++. |+.++....    -.++.+.|+|+.++.+|....|..+
T Consensus      1366 Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl-~l~sp~-~v~qli~N~----ik~t~rsdilr~s~~ly~rs~~n~~ 1439 (2724)
T KOG1826|consen 1366 LKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGL-ELCSPI-YVLQLIKNE----IKFTKRSDILRRSLSLYLRSDGNAY 1439 (2724)
T ss_pred             hhhhccceecCCcccccccccccccCchHhhhhh-hhCCHH-HHHHHHHHH----HhhhhHHHHHHHHHHHHHHhcccHH
Confidence            8899999999999999999999843322222222 566666 788887665    5677779999999999998888777


Q ss_pred             CC
Q psy17162        145 YD  146 (182)
Q Consensus       145 f~  146 (182)
                      |-
T Consensus      1440 fi 1441 (2724)
T KOG1826|consen 1440 FI 1441 (2724)
T ss_pred             HH
Confidence            63

>PRK09902 hypothetical protein; Provisional

Probab=93.44  E-value=0.14  Score=36.70  Aligned_cols=36  Identities=6%  Similarity=-0.102  Sum_probs=27.6

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCe--EEEeccCCCCC
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFL--LHLFRFALSGN   88 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~--~kl~dfg~a~~   88 (182)
                      .-+|..+++|.+..   +.||+++.++.  ++++||.-++.
T Consensus       142 a~LH~~Gv~Hgdly---~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        142 KKMHSVNRQHGCCY---VRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHCCCcCCCCC---HhheeecCCCCeeEEEEEhhccch
Confidence            35777777666666   99999987666  89999986644

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.44  E-value=0.36  Score=39.38  Aligned_cols=87  Identities=17%  Similarity=0.059  Sum_probs=51.3

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--H-----------HHHHHHHhhcchhcccccCCCCCcEE
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--E-----------TLRCIYIQDYHLCVRSTRYFSVDTFH   71 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~-----------~~~~~~l~~~~~~h~~~~~lk~~nil   71 (182)
                      .+-|+..+. +.+..+...-...=+++||+..+-.+.+..  .           .+...++...-.-+..|.|..|.|++
T Consensus       219 ~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~  297 (517)
T COG0661         219 RENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNIL  297 (517)
T ss_pred             HHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceE
Confidence            344554444 345555543223346777887776665541  1           11112222222223456667799999


Q ss_pred             EcCCCeEEEeccCCCCCCCch
Q psy17162         72 QRLQFLLHLFRFALSGNQDDL   92 (182)
Q Consensus        72 ~~~~~~~kl~dfg~a~~~~~~   92 (182)
                      ++.+|.+.+.|||....+...
T Consensus       298 v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         298 VRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             EecCCcEEEEcCcceecCCHH
Confidence            999999999999998776543

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.69  E-value=0.13  Score=36.06  Aligned_cols=28  Identities=11%  Similarity=0.125  Sum_probs=22.9

Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      .|.|+.|.|++++.++ ++++||+.+..-
T Consensus        80 ~H~D~~~~N~~~~~~~-~~lIDwe~a~~g  107 (188)
T PRK10271         80 LHMDVHAGNLVHSASG-LRLIDWEYAGDG  107 (188)
T ss_pred             ecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence            4667779999998777 899999998653

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=92.44  E-value=0.29  Score=36.49  Aligned_cols=29  Identities=3%  Similarity=-0.284  Sum_probs=24.1

Q ss_pred             hhcccccCCCCCcEEEcCCCeEEEeccCC
Q psy17162         57 LCVRSTRYFSVDTFHQRLQFLLHLFRFAL   85 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~~~kl~dfg~   85 (182)
                      .+|..|.|+++-||+++.+|.+.++||--
T Consensus       220 ~~GiVHGDlSefNIlV~~dg~~~vIDwPQ  248 (304)
T COG0478         220 RRGIVHGDLSEFNILVTEDGDIVVIDWPQ  248 (304)
T ss_pred             HcCccccCCchheEEEecCCCEEEEeCcc
Confidence            45666777779999999999999999853

>KOG1266|consensus

Probab=92.41  E-value=1.5  Score=33.86  Aligned_cols=120  Identities=15%  Similarity=0.162  Sum_probs=69.9

Q ss_pred             EeeecCCCceEEEeccCccchHHHHHHHHH---------------------HHHHhhcchhcccccCCCCCcEEEcCCCe
Q psy17162         19 SVKTTDDKKVVLVTGKGEAEKVQKELETLR---------------------CIYIQDYHLCVRSTRYFSVDTFHQRLQFL   77 (182)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---------------------~~~l~~~~~~h~~~~~lk~~nil~~~~~~   77 (182)
                      +-.+.+-..++.+.+|.+.+.+.++|...+                     ..|||+..- .+.|..+.-+.+.+..+|.
T Consensus       138 d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P-piihgnlTc~tifiq~ngL  216 (458)
T KOG1266|consen  138 DKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP-PIIHGNLTCDTIFIQHNGL  216 (458)
T ss_pred             ccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC-ccccCCcchhheeecCCce
Confidence            344445566778889999888888764321                     135555421 1345555578888887787


Q ss_pred             EEEeccCCCCCCCc--hhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         78 LHLFRFALSGNQDD--LLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        78 ~kl~dfg~a~~~~~--~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +|+.--........  .... ......+.+. |.+||.-..    .....++|||++|.-..+|.-+..-
T Consensus       217 Ikig~~ap~s~h~s~~~~~~~Ek~~~~~~~g-~~a~~sg~~----tn~~~a~dIy~fgmcAlemailEiq  281 (458)
T KOG1266|consen  217 IKIGSVAPDSTHPSVNSTREAEKSVNTSLPG-FSAPESGTT----TNTTGASDIYKFGMCALEMAILEIQ  281 (458)
T ss_pred             EEecccCccccchhhhhhhHhhhhccccCCc-cccCCcCcc----cccccchhhhhhhHHHHHHHHheec
Confidence            77653222111110  0000 0111234455 888886544    4556789999999877788777644

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=92.00  E-value=0.16  Score=35.90  Aligned_cols=29  Identities=3%  Similarity=0.019  Sum_probs=24.4

Q ss_pred             ccccCCCCCcEEEcC--CCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRL--QFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~--~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.  ++.+.++||+.+..
T Consensus       176 l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         176 LVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             EEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            368889999999998  56789999998755

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.85  E-value=0.13  Score=36.56  Aligned_cols=30  Identities=10%  Similarity=0.060  Sum_probs=20.1

Q ss_pred             ccccCCCCCcEEE-cCCCeEEEeccCCCCCC
Q psy17162         60 RSTRYFSVDTFHQ-RLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        60 ~~~~~lk~~nil~-~~~~~~kl~dfg~a~~~   89 (182)
                      ..|.|+.+.||++ ..++.++++||..|..-
T Consensus       145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n  175 (211)
T PF01633_consen  145 FCHNDLNPGNILINNKDGEVKLIDFEYAGYN  175 (211)
T ss_dssp             EE-S--SGGGEEETSSSSCEEE--GTT-EEE
T ss_pred             EeeccCccccEEeccCCCeEEEecHHHHhhc
Confidence            3577777999999 78899999999988653

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.47  E-value=0.49  Score=34.09  Aligned_cols=29  Identities=3%  Similarity=0.014  Sum_probs=23.2

Q ss_pred             ccccCCCCCcEEEcC-CCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRL-QFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~-~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++. ++.+.++||..|..
T Consensus       172 l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         172 FCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            456666699999997 57899999987744

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.33  E-value=0.2  Score=37.69  Aligned_cols=30  Identities=10%  Similarity=-0.040  Sum_probs=24.1

Q ss_pred             ccccCCCCCcEEEcCC----CeEEEeccCCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQ----FLLHLFRFALSGNQ   89 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~----~~~kl~dfg~a~~~   89 (182)
                      ..|.|+.+.||+++.+    +.+.++||+.|...
T Consensus       181 lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~  214 (302)
T cd05156         181 FCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN  214 (302)
T ss_pred             EEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC
Confidence            3566677999999975    88999999988553

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=91.25  E-value=0.22  Score=37.06  Aligned_cols=31  Identities=13%  Similarity=0.073  Sum_probs=26.1

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQD   90 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~   90 (182)
                      ..|.|+.|+|++.+.++.++|+||..|....
T Consensus       155 ~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D  185 (269)
T COG0510         155 PCHNDLNPGNLLLTDKGGLFLIDWEYAGLND  185 (269)
T ss_pred             eecCCCCccceEEcCCCcEEEEecccCCCcc
Confidence            3577777999999999999999999886643

>KOG1235|consensus

Probab=91.05  E-value=0.68  Score=37.94  Aligned_cols=91  Identities=15%  Similarity=0.019  Sum_probs=54.0

Q ss_pred             hHHHHhCCCCc--EEEEEEeeecCCCceEEEeccCccchHHHH--H-----------HHHHHHHHhhcchhcccccCCCC
Q psy17162          3 SIRAVFNQDEI--GVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--L-----------ETLRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         3 ~il~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--l-----------~~~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      .+.+-|++-+.  -+.++.+...-...=+++|||..+..+-+.  +           ..+.-.|++..=.-+..|.|--|
T Consensus       250 ~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHP  329 (538)
T KOG1235|consen  250 RFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHP  329 (538)
T ss_pred             HHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCC
Confidence            45566666552  123455554444445688898887776542  1           11222233332222345666669


Q ss_pred             CcEEEcC----CCeEEEeccCCCCCCCchh
Q psy17162         68 DTFHQRL----QFLLHLFRFALSGNQDDLL   93 (182)
Q Consensus        68 ~nil~~~----~~~~kl~dfg~a~~~~~~~   93 (182)
                      .||+++.    ++.+.+.|||+...+....
T Consensus       330 GNilv~~~~~~~~~ivllDhGl~~~is~~~  359 (538)
T KOG1235|consen  330 GNILVRPNPEGDEEIVLLDHGLYAVISHKT  359 (538)
T ss_pred             CcEEEecCCCCCccEEEEcccccccccHHH
Confidence            9999983    5789999999987766543

>TIGR02721 ycfN_thiK thiamine kinase

Probab=89.60  E-value=0.32  Score=35.68  Aligned_cols=28  Identities=11%  Similarity=0.001  Sum_probs=23.2

Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      .|.|+.|.|++++.++ +.++||+.+..-
T Consensus       149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       149 LHMDVHAYNLVVTPQG-LKLIDWEYASDG  176 (256)
T ss_pred             ecCCCCcCcEEEeCCC-CEEEeccccCcC
Confidence            5777779999999877 789999988553

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=89.02  E-value=0.46  Score=34.51  Aligned_cols=28  Identities=4%  Similarity=-0.104  Sum_probs=23.6

Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      .|.|+.|.|++++.++.+.|+||+.+..
T Consensus       166 ~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         166 THGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             ECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            5778889999999877788999997744

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=88.42  E-value=0.43  Score=34.50  Aligned_cols=27  Identities=7%  Similarity=-0.076  Sum_probs=23.3

Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      .|.|+.|.|++++.++ +.++||+.+..
T Consensus       156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       156 LHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             EecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            4788889999999888 99999998754

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=87.70  E-value=0.47  Score=33.72  Aligned_cols=29  Identities=7%  Similarity=-0.075  Sum_probs=18.9

Q ss_pred             ccccCCCCCcEEEc-CCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQR-LQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~-~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.|.||+++ .++.+-+.||+.+..
T Consensus       168 ~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  168 LIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             EEEeccccccceeeeccceeEEEecccceE
Confidence            45777889999999 667678999987643

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=87.68  E-value=0.65  Score=33.58  Aligned_cols=29  Identities=10%  Similarity=-0.030  Sum_probs=22.9

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.|++++.++..-++||+.+..
T Consensus       166 l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         166 WFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             EEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            35777889999998766567999998744

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02236 choline kinase

Probab=87.45  E-value=1.1  Score=34.56  Aligned_cols=31  Identities=0%  Similarity=-0.027  Sum_probs=24.5

Q ss_pred             ccccCCCCCcEEEcC-CCeEEEeccCCCCCCC
Q psy17162         60 RSTRYFSVDTFHQRL-QFLLHLFRFALSGNQD   90 (182)
Q Consensus        60 ~~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~   90 (182)
                      ..|+|+++.||+++. ++.+.++||..+....
T Consensus       202 ~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~  233 (344)
T PLN02236        202 FCHNDLQYGNIMIDEETRAITIIDYEYASYNP  233 (344)
T ss_pred             EEeCCCCcCcEEEeCCCCcEEEEeehhccccc
Confidence            456777799999986 4689999999886643

>PRK05231 homoserine kinase; Provisional

Probab=86.44  E-value=0.69  Score=35.09  Aligned_cols=29  Identities=14%  Similarity=-0.031  Sum_probs=22.8

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.+...-++||+.+..
T Consensus       189 liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        189 VIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cCCCCCCCCcEEEECCceEEEEecccccC
Confidence            45666779999999666568999998755

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=85.86  E-value=0.79  Score=34.65  Aligned_cols=29  Identities=7%  Similarity=-0.097  Sum_probs=23.3

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.|++++.++.+.++||+.+..
T Consensus       189 l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       189 VIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             cCCCCCCcCcEEEECCceEEEeecccccC
Confidence            45666669999999888778999998754

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=85.69  E-value=0.75  Score=35.29  Aligned_cols=30  Identities=7%  Similarity=-0.030  Sum_probs=23.8

Q ss_pred             cccCCCCCcEEEcC-CCeEEEeccCCCCCCC
Q psy17162         61 STRYFSVDTFHQRL-QFLLHLFRFALSGNQD   90 (182)
Q Consensus        61 ~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~   90 (182)
                      .|.|+.+.||+++. ++.++++||+.|....
T Consensus       185 CHnDl~~~NiL~~~~~~~l~lID~EYag~nd  215 (330)
T PLN02421        185 AHNDLLSGNLMLNEDEGKLYFIDFEYGSYSY  215 (330)
T ss_pred             EECCCCcccEEEeCCCCcEEEEcccccCCCc
Confidence            46667799999975 4789999999886643

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=84.59  E-value=0.79  Score=34.31  Aligned_cols=29  Identities=10%  Similarity=-0.087  Sum_probs=23.7

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.|.|++++.++.+.|.||+.+..
T Consensus       177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         177 VIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            45677779999999877778999988755

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1035|consensus

Probab=81.28  E-value=4.5  Score=36.45  Aligned_cols=90  Identities=17%  Similarity=0.124  Sum_probs=53.0

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEe--ccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccch
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLF--RFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSD  127 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~--dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~D  127 (182)
                      .++|+.+.-|..+.--+..+...+..+.+...  ||+.++...+...  ......... +.++|....  +....+...|
T Consensus       300 ~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~-~~~~e~~~~--~~~~~~r~~d  374 (1351)
T KOG1035|consen  300 AYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEI-RNADEDLKE--NTAKKSRLTD  374 (1351)
T ss_pred             HHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccc-ccccccccc--ccchhhhhhH
Confidence            37888766665544222224444555666666  8888777665443  111122223 677777765  1122334579


Q ss_pred             HHHHHHHHHHHHhCCCC
Q psy17162        128 VWSLGISLIELATGRFP  144 (182)
Q Consensus       128 iwslg~~l~~l~~g~~p  144 (182)
                      +|.+|.....+..|..+
T Consensus       375 L~~lgll~~~~~~~~~i  391 (1351)
T KOG1035|consen  375 LWCLGLLLLQLSQGEDI  391 (1351)
T ss_pred             HHHHHHHHhhhhhcCcc
Confidence            99999999888776544

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=80.45  E-value=2.1  Score=33.02  Aligned_cols=29  Identities=10%  Similarity=-0.099  Sum_probs=22.9

Q ss_pred             ccccCCCCCcEEEcCCCe-EEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFL-LHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~-~kl~dfg~a~~   88 (182)
                      +.|.|+.|.||+++.+.. +.+.||+.+..
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            455666699999998875 88999997744

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	182
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		9e-23
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-22
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		9e-22
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-21
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-16
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-12
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-10
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-08
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-08
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-08
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-08
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-07
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-07
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-07
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-07
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-07
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-07
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-07
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		8e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-06
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		7e-06
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		9e-04

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct: 170 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +  P+LP  +FS++F DF +
Sbjct: 229 EPSPQLPADKFSAEFVDFTS 248

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV+
Sbjct: 214 AGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +  P+LP  +FS++F DF +
Sbjct: 273 EPSPQLPADKFSAEFVDFTS 292

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 99.4 bits (246), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P +  PERI+P  N   Y ++SD+WSLGI+ IELA  RFPYD+WG+PF+QLKQVV+
Sbjct: 197 AGCKP-YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
Query: 161 DDPPRLPPGEFSSDFKDFIT 180
           +  P+LP  +FS++F DF +
Sbjct: 256 EPSPQLPADKFSAEFVDFTS 275

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Query: 101 ADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           A C P ++ PERIDPS +   YD+RSDVWSLGI+L ELATGRFPY  W S F+QL QVV+
Sbjct: 186 AGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
Query: 161 DDPPRLPPG---EFSSDFKDFITL 181
            DPP+L      EFS  F +F+ L
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNL 268

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 57/76 (75%), Gaps = 4/76 (5%)
Query: 107 FIRPERIDPSGNPS--NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           ++ PERIDP  +P+  +YDIR+DVWSLGISL+ELATG+FPY    + FE L +V+Q++PP
Sbjct: 190 YMAPERIDPP-DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP 248
Query: 165 RLPPG-EFSSDFKDFI 179
            LP    FS DF+ F+
Sbjct: 249 LLPGHMGFSGDFQSFV 264

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP---FEQLKQVVQDD 162
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P  +       FE L  +V + 
Sbjct: 187 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP 242
Query: 163 PPRLPPGEFSSDFKDFIT 180
           PP+LP G FS +F+DF+ 
Sbjct: 243 PPKLPSGVFSLEFQDFVN 260

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPR 165
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P     + FE L  +V + PP+
Sbjct: 171 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM-AIFELLDYIVNEPPPK 225
Query: 166 LPPGEFSSDFKDFIT 180
           LP   FS +F+DF+ 
Sbjct: 226 LPSAVFSLEFQDFVN 240

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP---------FEQLK 156
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P     +          FE L 
Sbjct: 168 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLD 223
Query: 157 QVVQDDPPRLPPGEFSSDFKDFIT 180
            +V + PP+LP G FS +F+DF+ 
Sbjct: 224 YIVNEPPPKLPSGVFSLEFQDFVN 247

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE ++       YD ++D+WS GI+ IELATG  PY  +  P + L   +Q+DPP
Sbjct: 185 PCWMAPEVME---QVRGYDFKADIWSFGITAIELATGAAPYHKY-PPMKVLMLTLQNDPP 240
Query: 165 RLPPG--------EFSSDFKDFITL 181
            L  G        ++   F+  I+L
Sbjct: 241 SLETGVQDKEMLKKYGKSFRKMISL 265

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE ++       YD ++D+WS GI+ IELATG  PY  +  P + L   +Q+DPP
Sbjct: 190 PCWMAPEVME---QVRGYDFKADIWSFGITAIELATGAAPYHKY-PPMKVLMLTLQNDPP 245
Query: 165 RLPPG--------EFSSDFKDFITL 181
            L  G        ++   F+  I+L
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMISL 270

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 45/116 (38%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 168 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223
Query: 145 -------------YDTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                          ++G       + FE L  +V + PP+LP G FS +F+DF+ 
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 279

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 45/116 (38%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 168 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223
Query: 145 -------------YDTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                          ++G       + FE L  +V + PP+LP G FS +F+DF+ 
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 279

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 45/116 (38%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 168 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223
Query: 145 -------------YDTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                          ++G       + FE L  +V + PP+LP G FS +F+DF+ 
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 279

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 45/116 (38%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 168 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223
Query: 145 -------------YDTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                          ++G       + FE L  +V + PP+LP G FS +F+DF+ 
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 279

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 45/116 (38%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 195 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 250
Query: 145 -------------YDTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                         + +G       + FE L  +V + PP+LP G FS +F+DF+ 
Sbjct: 251 AETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 306

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 49/120 (40%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY---------DTWGSP----- 151
           +++ PER+      ++Y ++SD+WS+G+SL+ELA GR+P            +G P     
Sbjct: 178 SYMAPERL----QGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGE 233
Query: 152 -------------------------------FEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                                          FE L  +V + PP+LP G F+ DF++F+ 
Sbjct: 234 EGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVN 293

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFI 179
           YD ++DVWSLGI+LIE+A    P+    +P   L ++ + +PP L  P  +SS+FKDF+
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFI 179
           YD ++DVWSLGI+LIE+A    P+    +P   L ++ + +PP L  P  +SS+FKDF+
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFI 179
           YD ++DVWSLGI+LIE+A    P+    +P   L ++ + +PP L  P  +SS+FKDF+
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 45/116 (38%)
Query: 106 NFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--------------------- 144
           +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                     
Sbjct: 230 SYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 285
Query: 145 -------------YDTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
                          ++G       + FE L  +V + PP+LP   FS +F+DF+ 
Sbjct: 286 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVN 341

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPR-LPPGEFSSDFKDFIT 180
           YD ++D+WSLGI+LIE+A    P+    +P   L ++ + DPP  L P ++S +F+DF+ 
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLK 257
Query: 181 L 181
           +
Sbjct: 258 I 258

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPR-LPPGEFSSDFKDFIT 180
           YD ++D+WSLGI+LIE+A    P+    +P   L ++ + DPP  L P ++S +F+DF+ 
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLK 249
Query: 181 L 181
           +
Sbjct: 250 I 250

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA G  
Sbjct: 165 GVAGQLTDTQIKRNTFVGT--PFWMAPEVIQQSA----YDSKADIWSLGITAIELAKGE- 217
Query: 144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           P ++   P   L  + +++PP L  G+F+  FK+FI
Sbjct: 218 PPNSDMHPMRVLFLIPKNNPPTL-VGDFTKSFKEFI 252

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 105 PNFIRPERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P ++ PE I    NP + YD +SD+WSLGI+ IE+A G  P      P   L  + ++  
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPA 251
Query: 164 PRLPPGEFSSDFKDFI 179
           PRL   ++S  F+ FI
Sbjct: 252 PRLKSKKWSKKFQSFI 267

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA G  
Sbjct: 164 GVAGQLTDTQIKRNXFVGT--PFWMAPEVIKQSA----YDSKADIWSLGITAIELARGEP 217
Query: 144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           P+     P + L  + +++PP L  G +S   K+F+
Sbjct: 218 PHSEL-HPMKVLFLIPKNNPPTL-EGNYSKPLKEFV 251

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA G  
Sbjct: 149 GVAGQLTDTQIKRNTFVGT--PFWMAPEVIKQSA----YDSKADIWSLGITAIELARGEP 202
Query: 144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           P+     P + L  + +++PP L  G +S   K+F+
Sbjct: 203 PHSEL-HPMKVLFLIPKNNPPTL-EGNYSKPLKEFV 236

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA G  
Sbjct: 149 GVAGQLTDTQIKRNXFVGT--PFWMAPEVIKQSA----YDSKADIWSLGITAIELARGEP 202
Query: 144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           P+     P + L  + +++PP L  G +S   K+F+
Sbjct: 203 PHSEL-HPMKVLFLIPKNNPPTL-EGNYSKPLKEFV 236

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA G  
Sbjct: 169 GVAGQLTDTQIKRNTFVGT--PFWMAPEVIKQSA----YDSKADIWSLGITAIELARGEP 222
Query: 144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           P+     P + L  + +++PP L  G +S   K+F+
Sbjct: 223 PHSEL-HPMKVLFLIPKNNPPTL-EGNYSKPLKEFV 256

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 84  ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF 143
            ++G   D  I R  +     P ++ PE I  S     YD ++D+WSLGI+ IELA G  
Sbjct: 161 GVAGQLTDTQIKRNXFVGT--PFWMAPEVIKQSA----YDFKADIWSLGITAIELAKGE- 213
Query: 144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           P ++   P   L  + ++ PP L  G+ S  FK+F+
Sbjct: 214 PPNSDLHPMRVLFLIPKNSPPTL-EGQHSKPFKEFV 248

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP-YDTWGSPFEQLKQVVQDDP 163
           P ++ PERI  +G    Y+ +SD+WSLG  L E+A  + P Y    + +   K++ Q D 
Sbjct: 200 PYYMSPERIHENG----YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255
Query: 164 PRLPPGEFSSDFKDFITL 181
           P LP   +S + +  + +
Sbjct: 256 PPLPSDHYSEELRQLVNM 273

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q++ P
Sbjct: 175 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP 232
Query: 165 RLPPGEFSSDFKDFI 179
            L  G +S  F++F+
Sbjct: 233 ALQSGHWSEYFRNFV 247

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q++ P
Sbjct: 214 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP 271
Query: 165 RLPPGEFSSDFKDFI 179
            L  G +S  F++F+
Sbjct: 272 ALQSGHWSEYFRNFV 286

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL 166
           ++ PE ID    P  Y   +D+WSLG ++IE+ATG+ P+   G P   + +V        
Sbjct: 189 YMAPEIIDK--GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 246
Query: 167 PPGEFSSDFKDFI 179
            P   S++ K FI
Sbjct: 247 IPESMSAEAKAFI 259

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL 166
           ++ PE ID    P  Y   +D+WSLG ++IE+ATG+ P+   G P   + +V        
Sbjct: 175 YMAPEIIDKG--PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 232
Query: 167 PPGEFSSDFKDFI 179
            P   S++ K FI
Sbjct: 233 IPESMSAEAKAFI 245

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I   G    Y+  +D+WSLGI+ IE+A G+ PY     P   +  +  + PP
Sbjct: 189 PFWMAPEVIQEIG----YNCVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMIPTNPPP 243
Query: 165 RL-PPGEFSSDFKDFI 179
               P  +S +F DF+
Sbjct: 244 TFRKPELWSDNFTDFV 259

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I    + S Y    D+WSLGI +IE+  G  PY +  SP + +K++    PP
Sbjct: 205 PYWMAPEVI----SRSLYATEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPP 259
Query: 165 RLP-PGEFSSDFKDFI 179
           +L    + S   +DF+
Sbjct: 260 KLKNSHKVSPVLRDFL 275

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	182
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-39
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-39
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-35
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-32
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-23
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-16
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-15
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-14
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-14
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-13
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-13
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-13
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-07
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-07
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-04
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	9e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-04

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  134 bits (339), Expect = 2e-39
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG 169
           PERI+P  N   Y ++SD+WSLGI++IELA  RFPYD+WG+PF+QLKQVV++  P+LP  
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 237

Query: 170 EFSSDFKDFI 179
           +FS++F DF 
Sbjct: 238 KFSAEFVDFT 247

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  125 bits (317), Expect = 1e-35
 Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 3/73 (4%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG 169
           PERIDPS +   YD+RSDVWSLGI+L ELATGRFPY  W S F+QL QVV+ DPP+L   
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253

Query: 170 E---FSSDFKDFI 179
           E   FS  F +F+
Sbjct: 254 EEREFSPSFINFV 266

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  116 bits (293), Expect = 3e-32
 Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 2/72 (2%)

Query: 110 PERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           PERIDP      +YDIR+DVWSLGISL+ELATG+FPY    + FE L +V+Q++PP LP 
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252

Query: 169 GE-FSSDFKDFI 179
              FS DF+ F+
Sbjct: 253 HMGFSGDFQSFV 264

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 93.8 bits (233), Expect = 2e-23
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 45/111 (40%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG-------------------- 149
           PER+  +     Y ++SD+WS+G+SL+E+A GR+P                         
Sbjct: 199 PERLQGTH----YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 254

Query: 150 ---------------------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
                                + FE L  +V + PP+LP G FS +F+DF+
Sbjct: 255 PRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 305

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 73.2 bits (180), Expect = 5e-16
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 110 PERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           PE I    NP + YD +SD+WSLGI+ IE+A G  P      P   L  + ++  PRL  
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPAPRLKS 256

Query: 169 GEFSSDFKDFI 179
            ++S  F+ FI
Sbjct: 257 KKWSKKFQSFI 267

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 71.2 bits (175), Expect = 2e-15
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQL-KQVVQDDP 163
           P ++ PERI    N   Y+ +SD+WSLG  L E+A  + P+         L K++ Q D 
Sbjct: 200 PYYMSPERI--HENG--YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255

Query: 164 PRLPPGEFSSDFKDFITL 181
           P LP   +S + +  + +
Sbjct: 256 PPLPSDHYSEELRQLVNM 273

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 69.8 bits (171), Expect = 1e-14
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG 169
           PE I    +   YD + DVWSLGI+ IELA  + P     +    L  + Q++ P L  G
Sbjct: 219 PEVILAM-DEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPALQSG 276

Query: 170 EFSSDFKDFI 179
            +S  F++F+
Sbjct: 277 HWSEYFRNFV 286

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P F+ PE  +       YD   DV++ G+ ++E+AT  +PY    +  +  ++V     P
Sbjct: 194 PEFMAPEMYE-----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 248

Query: 165 RLPPGEFSSDFKDFI 179
                    + K+ I
Sbjct: 249 ASFDKVAIPEVKEII 263

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 67.7 bits (166), Expect = 4e-14
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG 169
           PE I  S     YD ++D+WSLGI+ IELA G  P+     P + L  + +++PP L  G
Sbjct: 188 PEVIKQSA----YDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNNPPTL-EG 241

Query: 170 EFSSDFKDFITL 181
            +S   K+F+  
Sbjct: 242 NYSKPLKEFVEA 253

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 67.0 bits (164), Expect = 8e-14
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 110 PERIDPSGNP-SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP- 167
           PE +       + YD ++D+WSLGI+LIE+A    P+    +P   L ++ + DPP L  
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLT 244

Query: 168 PGEFSSDFKDFI 179
           P ++S +F+DF+
Sbjct: 245 PSKWSVEFRDFL 256

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 12/76 (15%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLK---QVVQDDPPRL 166
           PE +         D + D+WS    ++ +  G  P+    + + +     ++  + PP  
Sbjct: 225 PEVVMGKP----CDAKVDIWSSCCMMLHMLNGCHPW----TQYFRGPLCLKIASEPPPIR 276

Query: 167 P-PGEFSSDFKDFITL 181
             P   +      I  
Sbjct: 277 EIPPSCAPLTAQAIQE 292

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 65.9 bits (161), Expect = 2e-13
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 105 PNFIRPERI-------DPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQ 157
            N++ PE I       +   + S    +SDVWSLG  L  +  G+ P+    +   +L  
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232

Query: 158 VVQDDPPRLPPGEFSSDFKDFI 179
           ++  +     P     D +D +
Sbjct: 233 IIDPNHEIEFPDIPEKDLQDVL 254

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 65.6 bits (160), Expect = 4e-13
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 105 PNFIRPERI-------DPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQ 157
            N++ PE I       +   + S    +SDVWSLG  L  +  G+ P+    +   +L  
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279

Query: 158 VVQDDPPRLPPGEFSSDFKDFI 179
           ++  +     P     D +D +
Sbjct: 280 IIDPNHEIEFPDIPEKDLQDVL 301

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 64.7 bits (158), Expect = 5e-13
 Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 104 DPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           D  F+  E +    N + +  ++D+++L ++++  A             +Q  ++ Q   
Sbjct: 193 DSRFLANEVL--QENYT-HLPKADIFALALTVVCAAGAEPLP----RNGDQWHEIRQGRL 245

Query: 164 PRLPPGEFSSDFKDFI 179
           PR+ P   S +F + +
Sbjct: 246 PRI-PQVLSQEFTELL 260

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 64.7 bits (158), Expect = 5e-13
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-P 168
           PE I   G    Y+  +D+WSLGI+ IE+A G+ PY     P   +  +  + PP    P
Sbjct: 194 PEVIQEIG----YNCVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMIPTNPPPTFRKP 248

Query: 169 GEFSSDFKDFI 179
             +S +F DF+
Sbjct: 249 ELWSDNFTDFV 259

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 64.6 bits (158), Expect = 6e-13
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 105 PNFIRPERI-------DPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQ 157
            N++ PE I       +   + S    +SDVWSLG  L  +  G+ P+    +   +L  
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251

Query: 158 VVQDDPPRLPPGEFSSDFKDFI 179
           ++  +     P     D +D +
Sbjct: 252 IIDPNHEIEFPDIPEKDLQDVL 273

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 64.2 bits (157), Expect = 7e-13
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQV-VQDDP 163
             ++ PE ID    P  Y   +D+WSLG ++IE+ATG+ P+   G P   + +V +    
Sbjct: 187 LQYMAPEIID--KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH 244

Query: 164 PRLPPGEFSSDFKDFI 179
           P +P    S++ K FI
Sbjct: 245 PEIPE-SMSAEAKAFI 259

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE       P  Y+ +SD+W+LG  L EL T +  ++  GS    + +++    P
Sbjct: 189 PYYLSPEIC--ENKP--YNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFP 243

Query: 165 RLPPGEFSSDFKDFIT 180
            +    +S D +  ++
Sbjct: 244 PVSLH-YSYDLRSLVS 258

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 63.9 bits (156), Expect = 9e-13
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 12/80 (15%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL--- 166
           PE ++       YD ++D+WS GI+ IELATG  PY  +  P + L   +Q+DPP L   
Sbjct: 195 PEVMEQV---RGYDFKADIWSFGITAIELATGAAPYHKY-PPMKVLMLTLQNDPPSLETG 250

Query: 167 -----PPGEFSSDFKDFITL 181
                   ++   F+  I+L
Sbjct: 251 VQDKEMLKKYGKSFRKMISL 270

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 62.0 bits (151), Expect = 4e-12
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD 162
            DP ++ PE +       +Y   +DV+SLG++++E+A         G  ++QL+Q     
Sbjct: 218 GDPRYMAPELL-----QGSYGTAADVFSLGLTILEVACNMELPHG-GEGWQQLRQ--GYL 269

Query: 163 PPRLPPGEFSSDFKDFITL 181
           PP    G  SS+ +  + +
Sbjct: 270 PPEFTAG-LSSELRSVLVM 287

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 61.6 bits (150), Expect = 6e-12
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-P 168
           PE +        Y  + D+WSLGI  IE+  G  PY    +P   L  +  +  P L  P
Sbjct: 185 PEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNP 239

Query: 169 GEFSSDFKDFI 179
            + S+ F+DF+
Sbjct: 240 EKLSAIFRDFL 250

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 61.2 bits (149), Expect = 8e-12
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-P 168
           PE I  S     Y    D+WSLGI +IE+  G  PY +  SP + +K++    PP+L   
Sbjct: 210 PEVISRSL----YATEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRLRDSPPPKLKNS 264

Query: 169 GEFSSDFKDFI 179
            + S   +DF+
Sbjct: 265 HKVSPVLRDFL 275

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
            ++  PE      +    D R+DVWSLG  L  +  G  PYD      + +   VQ+   
Sbjct: 207 ISYRAPELFSVQSH-CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265

Query: 165 RLPPGEFSSDFKDFIT 180
                  SS     + 
Sbjct: 266 IPQSPRHSSALWQLLN 281

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 55.8 bits (135), Expect = 6e-10
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 11/76 (14%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE+I  S     Y    D+++LG+ L EL             FE   +   D   
Sbjct: 185 LRYMSPEQI--SSQD--YGKEVDLYALGLILAELLHVCDT------AFE-TSKFFTDLRD 233

Query: 165 RLPPGEFSSDFKDFIT 180
            +    F    K  + 
Sbjct: 234 GIISDIFDKKEKTLLQ 249

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 55.7 bits (135), Expect = 7e-10
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQL-KQVVQDDP 163
           P ++ PE++  +     Y+ +SD+WSLG  L EL     P+       ++L  ++ +   
Sbjct: 180 PYYMSPEQM--NRMS--YNEKSDIWSLGCLLYELCALMPPFT--AFSQKELAGKIREGKF 233

Query: 164 PRLPPGEFSSDFKDFIT 180
            R+P   +S +  + IT
Sbjct: 234 RRIPYR-YSDELNEIIT 249

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++  E +D +G+   Y+ + D++SLGI   E+           +  ++L+ V  + PP
Sbjct: 194 AMYVATEVLDGTGH---YNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPP 250

Query: 165 RLPPGEFSSDFKDFIT 180
                      K  I 
Sbjct: 251 DF-DDNKMKVEKKIIR 265

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 10/101 (9%), Positives = 26/101 (25%), Gaps = 11/101 (10%)

Query: 81  FRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIELA 139
           F   +      +  I   +     P       +     +P+      D W+LG+++  + 
Sbjct: 255 FEHLVRDGASAVSPIGRGFAP---PETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311

Query: 140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
               P            + +      +P        +  + 
Sbjct: 312 CADLPNT--DDAALGGSEWIFRSCKNIPQ-----PVRALLE 345

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQ-LKQVVQDDP 163
           P  IR    D   +   +   SDV++LG    EL    +P+     P E  + Q+     
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK--TQPAEAIIWQMGTGMK 260

Query: 164 PRLPPGEFSSDFKDFIT 180
           P L       +  D + 
Sbjct: 261 PNLSQIGMGKEISDILL 277

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 52.6 bits (126), Expect = 1e-08
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG 169
           PE +  +     YD +SD++S+GI+  ELA G  P+       + L + +    P L   
Sbjct: 204 PEVLQQNLQG--YDAKSDIYSVGITACELANGHVPFKDM-PATQMLLEKLNGTVPCLLDT 260

Query: 170 E 170
            
Sbjct: 261 S 261

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE+I   GN   Y  + D++SLG+ L EL     P+ T       L  V     P
Sbjct: 194 KLYMSPEQI--HGNS--YSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFP 246

Query: 165 RLPPGEFSSDFKDFIT 180
            L   +        + 
Sbjct: 247 PLFT-QKYPCEYVMVQ 261

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 50.0 bits (119), Expect = 7e-08
 Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 8/77 (10%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPG 169
            E ++ S     +    + W LG+S+  +     P+       +   +      P     
Sbjct: 260 REFLNASTAT--FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSL 317

Query: 170 EF------SSDFKDFIT 180
            F          K  I 
Sbjct: 318 AFGSCTPLPDFVKTLIG 334

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 6/57 (10%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRL 166
           PER   S + +    R+D+++L   L E  TG  PY   G     +   +    PR 
Sbjct: 204 PERF--SESHA--TYRADIYALTCVLYECLTGSPPYQ--GDQLSVMGAHINQAIPRP 254

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 105 PNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
             ++ PE +        +     DVWS GI L  +  G  P+D      ++     +   
Sbjct: 171 LPYVAPELL--KRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

Query: 164 PRLPPGEFSSDFKDFIT 180
              P  +  S     + 
Sbjct: 227 YLNPWKKIDSAPLALLH 243

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD--PPRLP 167
           PE I    + + Y  +SDV++ GI L EL TG+ PY    +  +Q+ ++V      P L 
Sbjct: 191 PEVIR-MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIEMVGRGSLSPDLS 248

Query: 168 --PGEFSSDFKDFIT 180
                     K  + 
Sbjct: 249 KVRSNCPKRMKRLMA 263

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
            +++ PE I+       +D + D+WSLG+   E   G+ P++   +  E  K++ + +  
Sbjct: 171 LDYLPPEMIEGRM----HDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVE-F 224

Query: 165 RLPPGEFSSDFKDFIT 180
             P    +   +D I+
Sbjct: 225 TFPD-FVTEGARDLIS 239

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 47.7 bits (114), Expect = 4e-07
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 105 PNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
             ++ PE +        +     DVWS GI L  +  G  P+D      ++     +   
Sbjct: 171 LPYVAPELL--KRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

Query: 164 PRLPPGEFSSDFKDFIT 180
              P  +  S     + 
Sbjct: 227 YLNPWKKIDSAPLALLH 243

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 105 PNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P F+ PE +  S     +     DVW++G++L     G+ P+         L   ++   
Sbjct: 201 PAFMAPESL--SETRKIFSGKALDVWAMGVTLYCFVFGQCPFM--DERIMCLHSKIKSQA 256

Query: 164 PRLPP-GEFSSDFKDFIT 180
              P   + + D KD IT
Sbjct: 257 LEFPDQPDIAEDLKDLIT 274

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 11/78 (14%), Positives = 20/78 (25%), Gaps = 4/78 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP--YDTWGSPFEQLKQVVQDD 162
             +I PE +       N     D++S G     + +        +       L      D
Sbjct: 190 EGWIAPEMLSEDCK-ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD 248

Query: 163 PPRLPPGEFSSDFKDFIT 180
               P        ++ I 
Sbjct: 249 CLH-PEKHEDVIARELIE 265

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 46.7 bits (111), Expect = 9e-07
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P +  PE ID   N      + D+W+LG  L  L   + P++      +  K  + +   
Sbjct: 214 PMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFRQHPFE------DGAKLRIVNGKY 266

Query: 165 RLPPG-EFSSDFKDFI 179
            +PP     + F   I
Sbjct: 267 SIPPHDTQYTVFHSLI 282

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 123 DIRSDVWSLGISLIELATGRFPY--DTWGSPFEQLKQVVQDDPPRLPPGEFSSD 174
           + + D+  +G SL  L   R+P       S     ++     P    P +   D
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI--EPADIDRD 231

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 123 DIRSDVWSLGISLIELATGRFPYDTWG-SPFEQLKQVVQDDPPRLP 167
           D  +D++S+GI L E+  G  P++  G +      + +QD  P + 
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFN--GETAVSIAIKHIQDSVPNVT 233

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
            +++ PE I+       +D + D+W  G+   E   G  P+D+  S  E  +++V  D  
Sbjct: 176 LDYLPPEMIEGKT----HDEKVDLWCAGVLCYEFLVGMPPFDS-PSHTETHRRIVNVD-L 229

Query: 165 RLPPGEFSSDFKDFIT 180
           + PP   S   KD I+
Sbjct: 230 KFPP-FLSDGSKDLIS 244

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 19/93 (20%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD-- 162
             F+ PE    S   S    + D+WSLGI L  +     P+    S  E    +   +  
Sbjct: 214 YEFMPPEFF--SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271

Query: 163 ---------------PPRLPPGEFSSDFKDFIT 180
                                   S++  DF+ 
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK 304

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 123 DIRSDVWSLGISLIELATGRFPYDTWG-SPFEQLKQVVQDDPPRLPPGEFSSD 174
           D RSDV+SLG  L E+ TG  P+   G SP     Q V++DP   PP      
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPI--PPSARHEG 245

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 10/82 (12%), Positives = 19/82 (23%), Gaps = 14/82 (17%)

Query: 105 PNFIRPERIDPSGNPSN-------YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQ 157
             F  PE        S             D W+LG+ +  +     P            +
Sbjct: 266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI--TKDAALGGSE 323

Query: 158 VVQDDPPRLPPGEFSSDFKDFI 179
            +      +P        +  +
Sbjct: 324 WIFRSCKNIPQ-----PVRALL 340

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDF 178
           SNY  + DV+S GI L E+ T R P+D  G P  ++   V +   R P         +  
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG-TRPPLIKNLPKPIESL 236

Query: 179 IT 180
           +T
Sbjct: 237 MT 238

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 43.9 bits (104), Expect = 8e-06
 Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 5/59 (8%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           PE I  +G    YD + DV+S GI L E+         +  P      +          
Sbjct: 191 PEMI--NGRS--YDEKVDVFSFGIVLCEIIGRVNADPDYL-PRTMDFGLNVRGFLDRYC 244

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP-P 168
           PE I        Y  ++D +S  + L  + TG  P+D +     +   +++++  R   P
Sbjct: 195 PETIGAEEES--YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP 252

Query: 169 GEFSSDFKDFIT 180
            +     ++ I 
Sbjct: 253 EDCPPRLRNVIE 264

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD-----PPRLPPG 169
           S +   SDVWS G+ L EL TG  P+            V  +      P   P  
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVPFRGI-DGLAVAYGVAMNKLALPIPSTCPEP 242

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGS-PFEQLKQVVQDDP 163
             ++ PE          Y    D WSLG++  EL  GR PY    S   +++    +   
Sbjct: 178 KPYMAPEMFSSRKGAG-YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV 236

Query: 164 PRLPPGEFSSDFKDFIT 180
              P   +S +    + 
Sbjct: 237 VTYPSA-WSQEMVSLLK 252

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           PN+I PE    S     + + SDVWSLG     L  GR P+DT       L +VV  D  
Sbjct: 176 PNYISPEIATRSA----HGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTLNKVVLAD-Y 229

Query: 165 RLPPGEFSSDFKDFIT 180
            +P    S + KD I 
Sbjct: 230 EMPS-FLSIEAKDLIH 244

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 12/68 (17%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P F  PE +     P    + +D++++G +L  L       +       +    + +D P
Sbjct: 241 PGFQAPEIV--RTGP---TVATDIYTVGRTLAALTLDLPTRNG------RYVDGLPEDDP 289

Query: 165 RLP-PGEF 171
            L     +
Sbjct: 290 VLKTYDSY 297

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT 147
           PN+I PE +   G    +    DVWS+G  +  L  G+ P++T
Sbjct: 205 PNYIAPEVLSKKG----HSFEVDVWSIGCIMYTLLVGKPPFET 243

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT 147
           PN+I PE +   G    +    DVWS+G  +  L  G+ P++T
Sbjct: 179 PNYIAPEVLSKKG----HSFEVDVWSIGCIMYTLLVGKPPFET 217

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP-YDTWGSPFEQLKQVVQDDP 163
             ++ PE +        YD  +D +SLG  L +L  G  P          ++ ++     
Sbjct: 354 HGYMAPEVLQ---KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410

Query: 164 PRLPPGEFSSDFKDFIT 180
             LP   FS + +  + 
Sbjct: 411 VELPDS-FSPELRSLLE 426

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 41.3 bits (97), Expect = 7e-05
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR--FPYDTWGSPFEQLKQVVQDD 162
           P F+ PE +        YD   D ++LG++L E+   R  F         ++LKQ V + 
Sbjct: 353 PGFMAPELLLGEE----YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408

Query: 163 PPRLPPGEFSSDFKDFIT 180
               P   FS   KDF  
Sbjct: 409 AVTYPDK-FSPASKDFCE 425

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE +        Y +  D WS G    E  TG  P+     P +   +V +    
Sbjct: 187 LQYLAPELL--EQKK--YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242

Query: 165 RLPPGEFSSDFKDFITL 181
            +   +  +    F ++
Sbjct: 243 HIVVYDDLTGAVKFSSV 259

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 110 PERIDPSGNPSN-YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP-PRLP 167
           PE +     P +     +D+WS  + L EL T   P+    S  E   +V  +   P +P
Sbjct: 177 PEALQ--KKPEDTNRRSADMWSFAVLLWELVTREVPFADL-SNMEIGMKVALEGLRPTIP 233

Query: 168 PGEFSSDFKDFIT 180
           PG  S      + 
Sbjct: 234 PG-ISPHVSKLMK 245

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE+I   GN   Y  + D++SLG+ L EL    + + T       +  V     P
Sbjct: 240 KLYMSPEQI--HGNN--YSHKVDIFSLGLILFELL---YSFSTQMERVRIITDVRNLKFP 292

Query: 165 RLPPGEFSSDFKDFIT 180
            L   +        + 
Sbjct: 293 LLFT-QKYPQEHMMVQ 307

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           +  +SDVWS GI L E+ + GR PY     P + +   V+    ++  
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEKG-YKMDA 235

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 60/180 (33%)

Query: 25  DKKVVLVTGKGEAEKVQ-KELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQF----LLH 79
           + K         A  +  K L T R   + D+ L   +T + S+D  H  +      +  
Sbjct: 255 NAKAW------NAFNLSCKILLTTRFKQVTDF-LSAATTTHISLD--HHSMTLTPDEVKS 305

Query: 80  LFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI--E 137
           L    L     DL                 P  +  + NP             +S+I   
Sbjct: 306 LLLKYLDCRPQDL-----------------PREVL-TTNP-----------RRLSIIAES 336

Query: 138 LATGRFPYDTWGSP-FEQLKQVVQDDPPRLPPGEFSSDFKDF--------IT------LW 182
           +  G   +D W     ++L  +++     L P E+   F           I       +W
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 26/138 (18%)

Query: 38  EKVQKELETLRCIYIQDYHLCVRSTR----YFSVDTFHQRLQFLLHLFRFALSGNQDDLL 93
           +      +   C  +QD    + S                   L           +    
Sbjct: 27  DAFVDNFD---CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL--SKQEE---- 77

Query: 94  IIRGLYGADCDPNF------IRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRFPYD 146
           +++         N+      I+ E+  PS     Y + R  +++      +    R    
Sbjct: 78  MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ-- 135

Query: 147 TWGSPFEQLKQVVQDDPP 164
               P+ +L+Q + +  P
Sbjct: 136 ----PYLKLRQALLELRP 149

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG--SPFEQLKQVVQDD 162
             ++ PE +        Y    D W+LG  L E+  G+ P+         E+++++V++ 
Sbjct: 349 VGYMAPEVVKNER----YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404

Query: 163 PPRLPPGEFSSDFKDFIT 180
           P       FS   +   +
Sbjct: 405 PEEYSER-FSPQARSLCS 421

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 105 PNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P +  PE     G    YD    DVWSLG+ L  L +G  P+D  G   ++L++ V    
Sbjct: 177 PPYAAPELF--QGKK--YDGPEVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGK 230

Query: 164 PRLPPGEFSSDFKDFI 179
            R+P    S+D ++ +
Sbjct: 231 YRIPFY-MSTDCENLL 245

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           +  +SDVWS GI L E+ + GR PY     P + +   V+    ++  
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEKG-YKMDA 407

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 109 RPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD----DP 163
            PE +      + + I+SDVW+ G+ L E+AT G  PY   G    Q+ ++++     + 
Sbjct: 387 APESL----AYNKFSIKSDVWAFGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYRMER 440

Query: 164 PRLPPGEF 171
           P   P + 
Sbjct: 441 PEGCPEKV 448

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 105 PNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P F  PE  +       +   + D+WS G++L  + TG +P++  G    +L + +    
Sbjct: 175 PAFQPPEIAN---GLDTFSGFKVDIWSAGVTLYNITTGLYPFE--GDNIYKLFENIGKGS 229

Query: 164 PRLPPGEFSSDFKDFIT 180
             +P  +      D + 
Sbjct: 230 YAIPG-DCGPPLSDLLK 245

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 105 PNFIRPERIDPSGNPS---NYDIRSDVWSLG-ISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             +  PE ++ S N           D++S+G +    L+ G+ P+   G  + +   +++
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF---GDKYSRESNIIR 252

Query: 161 -----DDPPRLPPGEFSSDFKDFIT 180
                D+   L      ++  D I+
Sbjct: 253 GIFSLDEMKCLHDRSLIAEATDLIS 277

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)

Query: 110 PERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD 146
           PE +     P   + +SDV+S G+ L ELAT + P+ 
Sbjct: 208 PEVLR--DEP--SNEKSDVYSFGVILWELATLQQPWG 240

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           Y  +SDVWS G+++ EL T G  PYD      E    +  +   RLP 
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSIL--EKGERLPQ 240

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             +I PE +        YD + DVWS+G+ L  L  G  P+   G   +++ + V+    
Sbjct: 202 AYYIAPEVLR-----KKYDEKCDVWSIGVILFILLAGYPPF--GGQTDQEILRKVEKGKY 254

Query: 165 RLPPGEF---SSDFKDFI 179
                E+   S   KD I
Sbjct: 255 TFDSPEWKNVSEGAKDLI 272

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           + I+SDVWS GI L E+ T GR PY   G    ++ Q ++    R+  
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERG-YRMVR 231

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWG-SPFEQLKQVVQDDPPRLPP 168
           +  +SDVWS G+ L EL T G  PY      PF+    + Q    RLP 
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPY--RHIDPFDLTHFLAQGR--RLPQ 249

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR--FPYDTWGSPFEQLKQVVQDD 162
             ++ P+ +   G  S +D   D WSLG+ + EL TG   F  D   +   ++ + +   
Sbjct: 224 IEYMAPDIV--RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 281

Query: 163 PPRLPPGEFSSDFKDFIT 180
            P  P    S+  KD I 
Sbjct: 282 EPPYPQE-MSALAKDLIQ 298

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           + I+SDVW+ G+ L E+AT G  PY   G    Q+ ++++ D  R+  
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY--PGIDLSQVYELLEKD-YRMER 233

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWG-SPFEQLKQVVQDDPPRLPP 168
           +  +SDVWS G+ L EL T G  PY     + F+    ++Q    RL  
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPY--PDVNTFDITVYLLQGR--RLLQ 317

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P F+ PE +  +    +Y  + D WS G+ L  L  G  P+   G         V +   
Sbjct: 238 PYFVAPEVL--NTTNESYGPKCDAWSAGVLLHLLLMGAVPF--PGVNDADTISQVLNKKL 293

Query: 165 RLPPGEF---SSDFKDFI 179
                 +   S   +D +
Sbjct: 294 CFENPNYNVLSPLARDLL 311

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           Y  +SDVWS G+++ EL T G  PY       E    + + +  RL  
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGE--RLAQ 238

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD----DPPRLPPGEF 171
           + I+SDVWS GI L+E+ T GR PY   G    ++ + ++       P   P E 
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPY--PGMSNPEVIRALERGYRMPRPENCPEEL 414

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWG-SPFEQLKQVVQDDPPRLPP 168
           +  +SDVWS G+ L EL T G  PY     + F+    ++Q    RL  
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPY--PDVNTFDITVYLLQGR--RLLQ 253

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             +I PE +        YD + DVWS G+ L  L +G  P+   G+    + + V+    
Sbjct: 192 AYYIAPEVLH-----GTYDEKCDVWSTGVILYILLSGCPPF--NGANEYDILKKVEKGKY 244

Query: 165 RLPPGEF---SSDFKDFI 179
                ++   S   KD I
Sbjct: 245 TFELPQWKKVSESAKDLI 262

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQ 160
           Y I+SDVWS G+ L E+ + G  PY       E  +++ +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQ 160
           Y ++SDVWS GI L E+ + G  PY       +  K V  
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 105 PNFIRPE----RIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPF---EQLKQ 157
             ++ P+     +    +   Y    D+WS+G++    ATG  P+  +  P    E + +
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238

Query: 158 VVQDDPPRLPPG 169
           ++   P     G
Sbjct: 239 IITGKPSGAISG 250

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 7/81 (8%)

Query: 105 PNFIRPE----RIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPF---EQLKQ 157
             ++ P+     +    +   Y    D+WS+G++    ATG  P+  +  P    E + +
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238

Query: 158 VVQDDPPRLPPGEFSSDFKDF 178
           ++   P     G   ++    
Sbjct: 239 IITGKPSGAISGVQKAENGPI 259

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQ 160
           Y   SDVWS GI L EL + G  PY       +  K + +
Sbjct: 224 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 263

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 121 NYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD----DPPRLPPGEF 171
            + I+SDVWS GI L EL T GR PY   G    ++   V+       P   P   
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCPPECPESL 410

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 121 NYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD----DPPRLPPGEF 171
            + I+SDVWS GI L EL T GR PY   G    ++   V+       P   P   
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCPPECPESL 493

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD 161
           Y  +SDVWS G+ L E+ T G  PY   G P E+L +++++
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKE 308

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPP 168
           Y  +SDVWS G+++ EL T G  PYD      E    + + +  RLP 
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGE--RLPQ 240

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQV 158
           Y I+SDVWS GI L E+ + G  PY          K +
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 288

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 38.1 bits (89), Expect = 9e-04
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD----DPPRLPPGE 170
           +  ++D WS G+ L E+ + G  PY       +++ + V      DPP+  PG 
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVTSGGRMDPPKNCPGP 273

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 38.0 bits (89), Expect = 9e-04
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQD 161
           Y  +SDVWS G+ + E+ T G  PY   G P E+L +++++
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKE 274

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	182
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.95
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.95
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.95
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.95
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.95
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.94
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.94
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.94
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.94
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.94
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.94
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.94
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.94
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.94
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.93
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.93
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.93
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.93
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.93
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.93
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.93
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.93
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.93
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.93
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.93
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.92
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.92
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.92
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.92
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.92
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.92
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.92
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.92
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.92
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.92
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.92
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.92
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.92
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.92
3niz_A	311	Rhodanese family protein; structural genomics, str	99.92
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.92
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.92
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.92
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.92
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.92
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.92
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.92
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.92
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.92
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.92
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.92
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.92
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.92
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.92
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.92
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.92
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.92
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.92
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.92
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.92
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.91
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.91
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.91
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.91
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.91
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.91
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.91
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.91
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.91
3bhy_A	283	Death-associated protein kinase 3; death associate	99.91
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.91
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.91
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.91
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.91
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.91
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.91
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.91
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.91
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.91
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.91
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.91
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.91
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.91
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.91
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.91
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.9
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.9
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.9
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.9
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.9
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.9
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.9
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.9
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.9
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.9
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.9
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.9
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.9
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.89
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.89
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.89
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.89
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.89
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.89
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.89
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.89
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.89
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.89
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.89
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.89
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.89
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.88
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.88
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.88
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.88
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.88
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.88
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.88
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.88
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.88
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.88
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.87
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.87
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.87
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.87
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.87
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.86
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.86
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.86
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.86
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.86
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.86
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.85
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.84
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.83
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.82
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.81
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.78
3uqc_A	286	Probable conserved transmembrane protein; structur	99.75
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.48
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.65
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.18
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.35
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.31
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.97
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.71
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.23
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	89.23
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	89.09
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	87.03
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	86.12
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	85.38
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	83.42
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	83.14
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	82.48
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	82.42
3ats_A	357	Putative uncharacterized protein; hypothetical pro	82.39
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	82.28
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	81.87
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	80.42
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	80.3
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	80.26

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.5e-37  Score=234.81  Aligned_cols=166  Identities=16%  Similarity=0.266  Sum_probs=132.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .|++.++|+|++. +.+..+ +...+|++|||+.+++|.+.+..                   .++.|||+.++   .||
T Consensus        75 ~il~~l~HpnIV~-~~~~~~-~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~I---iHR  149 (350)
T 4b9d_A           75 AVLANMKHPNIVQ-YRESFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI---LHR  149 (350)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-ETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTC---EET
T ss_pred             HHHHHCCCCCCCc-EEEEEE-ECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eec
Confidence            4788899988864 455555 56779999999999998876521                   12346776654   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||||+|||++.++.+||+|||+|+..........+ .+||+. |+|||++.+    ..|+.++||||+||++|+|++|++
T Consensus       150 DlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~-~~GT~~-YmAPE~l~~----~~y~~~~DiwSlGvilyemltG~~  223 (350)
T 4b9d_A          150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPY-YLSPEICEN----KPYNNKSDIWALGCVLYELCTLKH  223 (350)
T ss_dssp             TCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHH-HHSCCT-TCCHHHHTT----CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCHHHEEECCCCCEEEcccccceeecCCcccccc-cCCCcc-ccCHHHHCC----CCCCcHHHHHHHHHHHHHHHHCCC
Confidence            56699999999999999999999887654432223 689999 999999998    789999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ .+..+.+.++..+..+++ +..+|+++++||++
T Consensus       224 PF~~-~~~~~~~~~i~~~~~~~~-~~~~s~~~~~li~~  259 (350)
T 4b9d_A          224 AFEA-GSMKNLVLKIISGSFPPV-SLHYSYDLRSLVSQ  259 (350)
T ss_dssp             SCCC-SSHHHHHHHHHHTCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCCC-cCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHH
Confidence            9998 577788888888876666 56799999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.4e-37  Score=233.40  Aligned_cols=167  Identities=19%  Similarity=0.243  Sum_probs=130.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .|++.++|+|+|. +.+... +...+|++|||+.+++|.+.+..                .++.|||+.+++|   ||||
T Consensus       123 ~il~~l~HpnIV~-l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiH---RDlK  197 (346)
T 4fih_A          123 VIMRDYQHENVVE-MYNSYL-VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH---RDIK  197 (346)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-ETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC---CCCS
T ss_pred             HHHHhCCCCCCCc-EEEEEE-ECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---ccCC
Confidence            4788899988764 444444 45679999999999998875421                1234777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+|||++.+|.+||+|||+|+........ ....+||+. |+|||++..    ..|+.++||||+||++|+|++|.+||.
T Consensus       198 p~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~~~GTp~-YmAPEvl~~----~~y~~~~DiWSlGvilyeml~G~~PF~  271 (346)
T 4fih_A          198 SDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPY-WMAPELISR----LPYGPEVDIWSLGIMVIEMVDGEPPYF  271 (346)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             HHHEEECCCCCEEEecCcCceecCCCCCc-ccccccCcC-cCCHHHHCC----CCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            99999999999999999999876544322 234789999 999999988    789999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      + ....+.+..+..+.++.++ +..+|+++++||++
T Consensus       272 ~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  306 (346)
T 4fih_A          272 N-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR  306 (346)
T ss_dssp             T-SCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred             C-cCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence            8 5677777777777666554 34789999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.4e-37  Score=229.54  Aligned_cols=166  Identities=13%  Similarity=0.210  Sum_probs=130.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +|++.++|+|++ .+.+..+ +...+|++|||+.+++|.+.+...                 +..|||+.+++   ||||
T Consensus        84 ~il~~l~HpnIv-~l~~~~~-~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~Ii---HRDl  158 (311)
T 4aw0_A           84 DVMSRLDHPFFV-KLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII---HRDL  158 (311)
T ss_dssp             HHHTTCCCTTBC-CEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCC
T ss_pred             HHHHhCCCCCCC-eEEEEEE-eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCc---cCCC
Confidence            478888888876 4455555 567899999999999998865221                 23477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+|||++.++.+||+|||+|+....... ......+||+. |+|||++.+    ..|+.++||||+||++|+|++|.+|
T Consensus       159 KPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~-YmAPEvl~~----~~y~~~~DiWSlGvilyeml~G~~P  233 (311)
T 4aw0_A          159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ-YVSPELLTE----KSACKSSDLWALGCIIYQLVAGLPP  233 (311)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGG-GCCHHHHHH----SCBCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcc-cCCHHHHcC----CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            69999999999999999999987643322 12334789999 999999988    7899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ .+..+...+|..+. +.+ |..+|+++++||++
T Consensus       234 F~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~dli~~  267 (311)
T 4aw0_A          234 FRA-GNEGLIFAKIIKLE-YDF-PEKFFPKARDLVEK  267 (311)
T ss_dssp             SCC-SSHHHHHHHHHHTC-CCC-CTTCCHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHHcCC-CCC-CcccCHHHHHHHHH
Confidence            998 56667777777765 556 56799999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=234.53  Aligned_cols=167  Identities=19%  Similarity=0.239  Sum_probs=131.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .|++.++|+|+|.. .+... +...+|++|||+.+++|.+.+..                .++.|||+.+++|   ||||
T Consensus       200 ~il~~l~HpnIV~l-~~~~~-~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiH---RDiK  274 (423)
T 4fie_A          200 VIMRDYQHENVVEM-YNSYL-VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH---RDIK  274 (423)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-ETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC---CCCS
T ss_pred             HHHHhCCCCCCCce-EEEEE-ECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeec---ccCC
Confidence            47888999887644 44444 45679999999999998875421                1234777776554   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+|||++.+|.+||+|||+|+........ ....+||+. |+|||++..    ..|+.++||||+||++|+|++|.+||.
T Consensus       275 p~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~~~GTp~-YmAPEvl~~----~~y~~~~DiWSlGvilyeml~G~~PF~  348 (423)
T 4fie_A          275 SDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPY-WMAPELISR----LPYGPEVDIWSLGIMVIEMVDGEPPYF  348 (423)
T ss_dssp             TTTEEECTTCCEEECCCTTCEECCSSCCC-BCCCEECTT-TCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             HHHEEEcCCCCEEEecCccceECCCCCcc-ccccccCcC-cCCHHHHCC----CCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            99999999999999999999876544322 233789999 999999988    789999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      + ....+.+..+..+.++.++ +..+|+++++||++
T Consensus       349 ~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  383 (423)
T 4fie_A          349 N-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR  383 (423)
T ss_dssp             T-SCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred             C-cCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence            8 5677777777777666554 34789999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.9e-37  Score=228.97  Aligned_cols=164  Identities=16%  Similarity=0.208  Sum_probs=125.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.+..+ +...++++|||+.+++|.+.+..                 .+..|||+.++   .|||+|
T Consensus        79 il~~l~HpnIv-~l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~I---iHRDlK  153 (304)
T 3ubd_A           79 ILVEVNHPFIV-KLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI---IYRDLK  153 (304)
T ss_dssp             CCCCCCCTTEE-CEEEEEE-ETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSCC
T ss_pred             HHHHCCCCCCC-eEEEEEE-ECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---cCCCCC
Confidence            56677887766 4555555 56779999999999998775421                 12347777655   455566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+|||++.++.+||+|||+|+........ ....+||+. |+|||++.+    ..|+.++||||+||++|+|++|++||.
T Consensus       154 p~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~~~GT~~-YmAPE~~~~----~~y~~~~DiwSlGvilyemltG~~PF~  227 (304)
T 3ubd_A          154 PENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVE-YMAPEVVNR----RGHTQSADWWSFGVLMFEMLTGTLPFQ  227 (304)
T ss_dssp             GGGEEECTTSCEEEESSEEEEC-----CC-CCSCCCCGG-GCCHHHHHT----SCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHeEEcCCCCEEecccccceeccCCCcc-ccccccCcc-cCCHHHhcc----CCCCCCCcccchHHHHHHHHhCCCCCC
Confidence            99999999999999999999765443322 233789999 999999988    789999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + .+..+.+.++..+. +++ |..+|+++++||++
T Consensus       228 ~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  259 (304)
T 3ubd_A          228 G-KDRKETMTMILKAK-LGM-PQFLSPEAQSLLRM  259 (304)
T ss_dssp             C-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             C-cCHHHHHHHHHcCC-CCC-CCcCCHHHHHHHHH
Confidence            8 56667777777765 455 56799999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.8e-35  Score=218.85  Aligned_cols=169  Identities=17%  Similarity=0.190  Sum_probs=123.3

Q ss_pred             hHHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.++|+|+|.....+..  .....++++|||+.+++|.+.+..                 .++.|||+.+. .+.||
T Consensus        77 ~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHR  155 (290)
T 3fpq_A           77 EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHR  155 (290)
T ss_dssp             HHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCC
T ss_pred             HHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC-CEEec
Confidence            47888999888755443322  234568899999999999886521                 12347777651 14566


Q ss_pred             CCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         64 YFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        64 ~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||||+|||++. ++.+||+|||+|+......   ....+||+. |+|||++.+     .|+.++||||+||++|+|+||+
T Consensus       156 DlKp~NILl~~~~g~vKl~DFGla~~~~~~~---~~~~~GTp~-YmAPE~~~~-----~y~~~~DiwSlGvilyelltg~  226 (290)
T 3fpq_A          156 DLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPE-FMAPEMYEE-----KYDESVDVYAFGMCMLEMATSE  226 (290)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCCTTS---BEESCSSCC-CCCGGGGGT-----CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccChhheeEECCCCCEEEEeCcCCEeCCCCc---cCCcccCcc-ccCHHHcCC-----CCCcHHHHHHHHHHHHHHHHCC
Confidence            66699999975 7899999999997644332   233789999 999998865     5899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +||.+..........+..+..|...+..+|+++++||++
T Consensus       227 ~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~  265 (290)
T 3fpq_A          227 YPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             CTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHH
Confidence            999874444444445555554433356788999998863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.7e-35  Score=215.61  Aligned_cols=163  Identities=18%  Similarity=0.213  Sum_probs=114.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++++.++|+|++ .+.++.. +...++++|||+ .+++.+.+..                 .+..|+|+.+++|+   |+
T Consensus        65 ~il~~l~HpnIv-~~~~~~~-~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHR---Di  138 (275)
T 3hyh_A           65 SYLRLLRHPHII-KLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHR---DL  138 (275)
T ss_dssp             HHHHHCCCTTBC-CEEEEEE-CSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CC
T ss_pred             HHHHHCCCCCCC-eEEEEEE-ECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---cC
Confidence            478889988876 4455555 567789999998 4677775411                 12347777765555   55


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.+||+|||+|+.......  ....+||+. |+|||++.+    ..+ +.++||||+||++|+|++|++|
T Consensus       139 KP~NILl~~~~~vkl~DFGla~~~~~~~~--~~~~~GT~~-Y~APE~~~~----~~y~~~~~DiwSlGvily~lltg~~P  211 (275)
T 3hyh_A          139 KPENLLLDEHLNVKIADFGLSNIMTDGNF--LKTSCGSPN-YAAPEVISG----KLYAGPEVDVWSCGVILYVMLCRRLP  211 (275)
T ss_dssp             CTTTEEECTTCCEEECCSSCC-----------------CT-TSCHHHHSS----SSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ChHHeEECCCCCEEEeecCCCeecCCCCc--cCCeeECcc-cCChhhhcC----CCCCCChhhhHHHHHHHHHHHHCCCC
Confidence            59999999999999999999987654433  334789999 999999987    565 4799999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ .+..+...++..+. +++ |..+|++++++|++
T Consensus       212 F~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  245 (275)
T 3hyh_A          212 FDD-ESIPVLFKNISNGV-YTL-PKFLSPGAAGLIKR  245 (275)
T ss_dssp             SCC-SSHHHHHHHHHHTC-CCC-CTTSCHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            988 45555555565554 556 56799999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.5e-35  Score=222.91  Aligned_cols=166  Identities=13%  Similarity=0.109  Sum_probs=122.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|+|. +.+... +...++++|||+.+++|.+.+..                 .++.|||+.+   +.|||||
T Consensus       103 il~~l~HpnIV~-l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlK  177 (336)
T 4g3f_A          103 ACAGLSSPRIVP-LYGAVR-EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVK  177 (336)
T ss_dssp             TTTTCCCTTBCC-EEEEEE-ETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCC
T ss_pred             HHHhCCCCCCCc-EEEEEE-ECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccC
Confidence            567788888764 445544 46678999999999999886522                 1234777765   4555566


Q ss_pred             CCcEEEcCCC-eEEEeccCCCCCCCchhh----hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         67 VDTFHQRLQF-LLHLFRFALSGNQDDLLI----IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        67 ~~nil~~~~~-~~kl~dfg~a~~~~~~~~----~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+|||++.+| .+||+|||+|+.......    ......+||+. |+|||++.+    ..|+.++||||+||++|+|++|
T Consensus       178 p~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~-YmAPE~~~~----~~y~~~~DiwSlGvilyemltG  252 (336)
T 4g3f_A          178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-HMAPEVVMG----KPCDAKVDIWSSCCMMLHMLNG  252 (336)
T ss_dssp             GGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGG-GCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCcc-ccCHHHHCC----CCCCcHHHHHHHHHHHHHHHHC
Confidence            9999999987 699999999987643321    11223689999 999999998    7899999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCC--CCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPP--RLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~~~~i~~  181 (182)
                      ++||.+ ....+...++..+.++  .+ |..+|++++++|++
T Consensus       253 ~~Pf~~-~~~~~~~~~i~~~~~~~~~~-~~~~s~~~~~li~~  292 (336)
T 4g3f_A          253 CHPWTQ-YFRGPLCLKIASEPPPIREI-PPSCAPLTAQAIQE  292 (336)
T ss_dssp             SCSSTT-TCCSCCHHHHHHSCCGGGGS-CTTSCHHHHHHHHH
T ss_pred             cCCCCC-CCHHHHHHHHHcCCCCchhc-CccCCHHHHHHHHH
Confidence            999988 3444556666666543  23 45789999998863

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8.5e-35  Score=220.78  Aligned_cols=169  Identities=16%  Similarity=0.157  Sum_probs=130.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      .++..++|+++++.+.+....+...++++|||+.+++|.+++..                                 ...
T Consensus       119 ~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl  198 (353)
T 4ase_A          119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM  198 (353)
T ss_dssp             HHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHH
Confidence            36778888777777777776667789999999999999887632                                 123


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .||||||+|||++.++.+||+|||+|+....... ......+|++. |+|||++..    ..|+.++||
T Consensus       199 ~yLH~~~i---iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~-ymAPE~l~~----~~y~~ksDV  270 (353)
T 4ase_A          199 EFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WMAPETIFD----RVYTIQSDV  270 (353)
T ss_dssp             HHHHHTTC---CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGG-GCCHHHHHH----CCCCHHHHH
T ss_pred             HhHhhCCe---ecCccCccceeeCCCCCEEECcchhhhhcccCCCceeecccccccc-ccCHHHHhc----CCCCCcccE
Confidence            47777665   4556669999999999999999999987644322 11223567777 999999998    789999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |||||++|||+| |..||.+..........+..+.+++. |..+|+++++++.
T Consensus       271 wS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~-p~~~~~~~~~li~  322 (353)
T 4ase_A          271 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTML  322 (353)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             eehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            999999999998 99999985555555555667777766 5668999988765

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=6e-34  Score=212.21  Aligned_cols=169  Identities=20%  Similarity=0.221  Sum_probs=118.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|+|.. .++..  ...++++|||+.+++|.+.+..                  .+..|||+.+   +.|||
T Consensus        84 ~il~~l~HpNIV~l-~g~~~--~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRD  157 (307)
T 3omv_A           84 AVLRKTRHVNILLF-MGYMT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRD  157 (307)
T ss_dssp             HHHTTCCCTTBCCE-EEEEC--SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSC
T ss_pred             HHHHhCCCCCEeeE-EEEEE--CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCc
Confidence            36788999998754 44443  4568999999999999886511                  1235777765   45556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |||+|||++.++.+||+|||+|+....... ......+||+. |+|||++..... ..|+.++|||||||++|||+||+.
T Consensus       158 lKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~-ymAPE~l~~~~~-~~y~~ksDVwS~Gvvl~Elltg~~  235 (307)
T 3omv_A          158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL-WMAPEVIRMQDN-NPFSFQSDVYSYGIVLYELMTGEL  235 (307)
T ss_dssp             CCSSSEEEETTEEEEECCCSSCBC------------CCCCTT-SCCHHHHHCCSS-CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCC-ccCHHHhhccCC-CCCCcHHHhHhHHHHHHHHHHCCC
Confidence            669999999999999999999977543221 11233689999 999999875221 468899999999999999999999


Q ss_pred             CCCCCCCcHHHHHH-HhhCCC-CCCC--CCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQ-VVQDDP-PRLP--PGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~-i~~~~~-~~~~--~~~~s~~~~~~i~  180 (182)
                      ||.+. .....+.. +..+.. |.++  +..+|+++++++.
T Consensus       236 Pf~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~  275 (307)
T 3omv_A          236 PYSHI-NNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVA  275 (307)
T ss_dssp             TTTTC-CCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHH
T ss_pred             CCCCC-ChHHHHHHHHhcCCCCCCcccccccchHHHHHHHH
Confidence            99984 44344444 444432 2222  3468899998875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.9e-34  Score=213.69  Aligned_cols=166  Identities=15%  Similarity=0.153  Sum_probs=128.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH---------------------------------HHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE---------------------------------TLRC   49 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------------------------------~~~~   49 (182)
                      .+++.++|+|+|.. .++.. +...+++++||+.+++|.+++.                                 +...
T Consensus        81 ~il~~l~HpNIV~l-~g~~~-~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  158 (308)
T 4gt4_A           81 MLRARLQHPNVVCL-LGVVT-KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM  158 (308)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC-SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCc-ceEEE-ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence            36788999888744 44444 4567899999999999987662                                 1123


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .||||||+|||++.++.+||+|||+|+........ ..+..+|++. |+|||++..    ..++.++||
T Consensus       159 ~yLH~~~i---iHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~-ymAPE~l~~----~~~s~ksDV  230 (308)
T 4gt4_A          159 EYLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMAPEAIMY----GKFSIDSDI  230 (308)
T ss_dssp             HHHHHTTC---CCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGG-GCCHHHHHH----CCCCHHHHH
T ss_pred             HHHHhCCC---CCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCc-ccCHHHHhC----CCCCccchh
Confidence            57777765   55566699999999999999999999875443221 1223567778 999999988    789999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |||||++|||+| |..||.+ ....+.+..+..+..++. |..+|+++++++.
T Consensus       231 wSfGvvl~El~t~g~~Pf~~-~~~~~~~~~i~~~~~~~~-p~~~~~~~~~li~  281 (308)
T 4gt4_A          231 WSYGVVLWEVFSYGLQPYCG-YSNQDVVEMIRNRQVLPC-PDDCPAWVYALMI  281 (308)
T ss_dssp             HHHHHHHHHHHTTTCCTTTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCC-cccchHHHHHHHH
Confidence            999999999998 8999998 466677777777776766 5668999988764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=6.9e-34  Score=214.12  Aligned_cols=166  Identities=17%  Similarity=0.218  Sum_probs=121.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------------------HHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------------------LRCI   50 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------------------~~~~   50 (182)
                      ++++.++|+|+|.. .++.. +...++++|||+.+++|.+++..                                ....
T Consensus        95 ~il~~l~HpnIV~l-~g~~~-~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~  172 (329)
T 4aoj_A           95 ELLTMLQHQHIVRF-FGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMV  172 (329)
T ss_dssp             HHHTTCCCTTBCCE-EEEEC-SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCcE-EEEEE-ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHH
Confidence            36788889888744 44444 45678999999999998775421                                1234


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |||+.+   +.||||||+|||++.++.+||+|||+|+....... ...+..+|++. |+|||++..    ..++.++|||
T Consensus       173 yLH~~~---iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~-ymAPE~~~~----~~~~~~sDvw  244 (329)
T 4aoj_A          173 YLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILY----RKFTTESDVW  244 (329)
T ss_dssp             HHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGG-GCCHHHHTT----CCCCHHHHHH
T ss_pred             HHhcCC---eecccccHhhEEECCCCcEEEcccccceeccCCCcceecCccccccc-ccChhhhcC----CCCCcccccc
Confidence            777765   45556669999999999999999999987544322 11233568888 999999998    7899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||||++|||+| |+.||.+ ....+.+..+..+.++++ |..+|+++++++.
T Consensus       245 S~Gvvl~Ellt~G~~Pf~~-~~~~~~~~~i~~g~~~~~-p~~~~~~~~~li~  294 (329)
T 4aoj_A          245 SFGVVLWEIFTYGKQPWYQ-LSNTEAIDCITQGRELER-PRACPPEVYAIMR  294 (329)
T ss_dssp             HHHHHHHHHHTTSCCTTCS-SCHHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             chHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCCCCC-cccccHHHHHHHH
Confidence            99999999999 8999998 466677777888877777 5678999999875

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.7e-34  Score=214.75  Aligned_cols=166  Identities=19%  Similarity=0.239  Sum_probs=128.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------HHHHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------LRCIYI   52 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------~~~~~l   52 (182)
                      ++++.++|+|+|. +.++.. +...++++|||+.+++|.+.+..                              .+..||
T Consensus        67 ~il~~l~HpnIV~-l~g~~~-~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  144 (299)
T 4asz_A           67 ELLTNLQHEHIVK-FYGVCV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL  144 (299)
T ss_dssp             HHHTTCCCTTBCC-EEEEEC-SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcc-EEEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3677888888874 444444 45678999999999998876632                              123577


Q ss_pred             hhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHH
Q psy17162         53 QDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSL  131 (182)
Q Consensus        53 ~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwsl  131 (182)
                      |+.++   .||||||+|||++.++.+||+|||+|+........ ......|++. |+|||++..    ..|+.++|||||
T Consensus       145 H~~~i---iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~-ymAPE~~~~----~~~~~k~DVwS~  216 (299)
T 4asz_A          145 ASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPESIMY----RKFTTESDVWSL  216 (299)
T ss_dssp             HHTTC---CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGG-GCCHHHHHH----CCCCHHHHHHHH
T ss_pred             HhCCc---ccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChh-hcCHHHHcC----CCCCchhhHHHH
Confidence            77655   55556699999999999999999999765443221 1122457777 999999998    789999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        132 GISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       132 g~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||++|||+| |+.||.+ .+..+.+..+..+..++. |..+|+++++++.
T Consensus       217 Gvvl~Ellt~G~~Pf~~-~~~~~~~~~i~~~~~~~~-p~~~~~~~~~li~  264 (299)
T 4asz_A          217 GVVLWEIFTYGKQPWYQ-LSNNEVIECITQGRVLQR-PRTCPQEVYELML  264 (299)
T ss_dssp             HHHHHHHHTTTCCTTTT-SCHHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCCCCC-CccchHHHHHHHH
Confidence            999999998 8999998 466677778888877766 5668999999775

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1e-32  Score=222.29  Aligned_cols=161  Identities=15%  Similarity=0.171  Sum_probs=119.0

Q ss_pred             HhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCc
Q psy17162          7 VFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDT   69 (182)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~n   69 (182)
                      .++|+|++ .+.+..+ +...+|++|||+.+++|.+.+..                 .+..|||+.+++|   |||||+|
T Consensus       248 ~~~HP~IV-~l~~~f~-~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiH---RDLKPeN  322 (689)
T 3v5w_A          248 TGDCPFIV-CMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY---RDLKPAN  322 (689)
T ss_dssp             SSCCTTBC-CEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEEC---CCCSGGG
T ss_pred             hCCCCCEe-EEEEEEE-ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cCCchHH
Confidence            34566655 5555555 56789999999999999886521                 1234777766555   5555999


Q ss_pred             EEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q psy17162         70 FHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG  149 (182)
Q Consensus        70 il~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~  149 (182)
                      ||++.+|++||+|||+|+.......  .+ .+||+. |+|||++..   ...|+.++|+||+||++|+|++|.+||.+..
T Consensus       323 ILld~~G~vKL~DFGlA~~~~~~~~--~t-~~GTp~-YmAPEvl~~---~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~  395 (689)
T 3v5w_A          323 ILLDEHGHVRISDLGLACDFSKKKP--HA-SVGTHG-YMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  395 (689)
T ss_dssp             EEECTTSCEEECCCTTCEECSSCCC--CS-CCSCGG-GCCHHHHST---TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG
T ss_pred             eEEeCCCCEEecccceeeecCCCCC--CC-ccCCcC-ccCHHHHhC---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999987655432  33 799999 999999964   1478999999999999999999999997621


Q ss_pred             --CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        150 --SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       150 --~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                        ........+... .+.+ |..+|+++++||++
T Consensus       396 ~~~~~~i~~~i~~~-~~~~-p~~~S~~a~dLI~~  427 (689)
T 3v5w_A          396 TKDKHEIDRMTLTM-AVEL-PDSFSPELRSLLEG  427 (689)
T ss_dssp             CCCHHHHHHHHHHC-CCCC-CTTSCHHHHHHHHH
T ss_pred             hHHHHHHHHhhcCC-CCCC-CccCCHHHHHHHHH
Confidence              222333334444 4556 56799999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.97  E-value=2.8e-31  Score=213.04  Aligned_cols=165  Identities=18%  Similarity=0.204  Sum_probs=126.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      +|++.++|+|++ .+.+... +...++++||++.+++|.+.+.                .  .++.|||+.+++   |||
T Consensus       206 ~il~~l~hpnIv-~l~~~~~-~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~ii---HRD  280 (573)
T 3uto_A          206 QTMSVLRHPTLV-NLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---HLD  280 (573)
T ss_dssp             HHHHHTCCTTBC-CEEEEEE-CSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHHhCCCCCCC-eEEEEEE-ECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCee---ecc
Confidence            478889998876 4555555 5678999999999999877541                0  123477776555   555


Q ss_pred             CCCCcEEEcCC--CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQ--FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~--~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |||+|||++.+  +.+||+|||+|+.......  ....+||+. |+|||++.+    ..|+.++||||+||++|+|++|.
T Consensus       281 lKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~--~~~~~GT~~-y~APEv~~~----~~y~~~~DiWSlGvilyeml~G~  353 (573)
T 3uto_A          281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAE-FAAPEVAEG----KPVGYYTDMWSVGVLSYILLSGL  353 (573)
T ss_dssp             CCGGGEEESSSSCCCEEECCCSSCEECCTTSE--EEEECSSGG-GCCHHHHTT----CCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             CChhhccccCCCCCCEEEeeccceeEccCCCc--eeeeEECcc-ccCHHHhCC----CCCCcHHHHHHHHHHHHHHHHCC
Confidence            56999999865  8999999999987654433  233689999 999999998    78999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+.+.++..+.. .++   +..+|+++++||++
T Consensus       354 ~Pf~~-~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~dli~~  393 (573)
T 3uto_A          354 SPFGG-ENDDETLRNVKSCDW-NMDDSAFSGISEDGKDFIRK  393 (573)
T ss_dssp             CSSCC-SSHHHHHHHHHTTCC-CCCSGGGTTSCHHHHHHHHT
T ss_pred             CCCCC-cCHHHHHHHHHhCCC-CCCcccccCCCHHHHHHHHH
Confidence            99998 566677777766542 222   34789999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=5.2e-31  Score=202.98  Aligned_cols=146  Identities=16%  Similarity=0.157  Sum_probs=107.8

Q ss_pred             hHHHHhCCCCcEEEEEEeee-----cCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchh
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT-----TDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLC   58 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~   58 (182)
                      .|++.++|+|++.. .++..     .+...+|++|||+. +++.+.+                   .++  .|||+.+++
T Consensus       105 ~il~~l~HpnIv~l-~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al--~ylH~~~ii  180 (398)
T 4b99_A          105 KILKHFKHDNIIAI-KDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGL--KYMHSAQVI  180 (398)
T ss_dssp             HHHHHCCCTTBCCE-EEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHH--HHHHHTTCB
T ss_pred             HHHHhcCCCCcceE-eeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCcCc
Confidence            47888999888744 44332     24578899999986 4566643                   333  377777655


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh---hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI---IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~---~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                         ||||||+|||++.++.+||+|||+|+.......   ......+||+. |+|||++.+   ...++.++||||+||++
T Consensus       181 ---HRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~-Y~APEv~~~---~~~~~~~~DiWSlG~il  253 (398)
T 4b99_A          181 ---HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW-YRAPELMLS---LHEYTQAIDLWSVGCIF  253 (398)
T ss_dssp             ---CCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCT-TCCHHHHTT---CSCCCTHHHHHHHHHHH
T ss_pred             ---CCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChH-hcCHHHhcC---CCCCCChhheehhHHHH
Confidence               555559999999999999999999987643321   11234789999 999999876   13468999999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      |+|++|++||.+ .+..+++..|..
T Consensus       254 ~ell~G~~pF~g-~~~~~~l~~I~~  277 (398)
T 4b99_A          254 GEMLARRQLFPG-KNYVHQLQLIMM  277 (398)
T ss_dssp             HHHHHTSCSSCC-SSHHHHHHHHHH
T ss_pred             HHHHHCCCCCCC-CCHHHHHHHHHH
Confidence            999999999998 566677777654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=8.3e-32  Score=200.46  Aligned_cols=166  Identities=16%  Similarity=0.137  Sum_probs=106.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----------CCCceEEEeccCccchHHHHHHH--------------------HHHHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----------DDKKVVLVTGKGEAEKVQKELET--------------------LRCIYI   52 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l   52 (182)
                      .+++.++|+|++.....+...          +...++++||++.++++.+.+..                    .+..||
T Consensus        55 ~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl  134 (299)
T 4g31_A           55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL  134 (299)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            367888998887554433322          23347899999999888775421                    123477


Q ss_pred             hhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-----------hhcccCCCCCCcccCccccCCCCCCCC
Q psy17162         53 QDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-----------IRGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        53 ~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-----------~~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                      |+.+++   ||||||+|||++.++.+||+|||+|+.......           ...+..+||+. |+|||++.+    ..
T Consensus       135 H~~~Ii---HRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~-YmAPE~~~~----~~  206 (299)
T 4g31_A          135 HSKGLM---HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKL-YMSPEQIHG----NS  206 (299)
T ss_dssp             HHTTCC---CCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCT-TSCHHHHTT----CC
T ss_pred             HHCcCc---cccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCcc-ccCHHHHcC----CC
Confidence            776655   555669999999999999999999987644321           01233689999 999999998    78


Q ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+.++||||+||++|+|++   ||.+.......+..+.....|+. +...++.+++||+
T Consensus       207 y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~li~  261 (299)
T 4g31_A          207 YSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPL-FTQKYPCEYVMVQ  261 (299)
T ss_dssp             CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHH-HHHHCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCC-CcccCHHHHHHHH
Confidence            9999999999999999995   78652122223333333333322 2235667777765

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=6.8e-31  Score=200.22  Aligned_cols=147  Identities=20%  Similarity=0.240  Sum_probs=102.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------HHHHHHhhcchhcccccCCCCCc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------LRCIYIQDYHLCVRSTRYFSVDT   69 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~~~~~l~~~~~~h~~~~~lk~~n   69 (182)
                      +++.+.++++++.+.+... +...++++|||+.++++.+.+..              .+..|+|+.+++||   ||||+|
T Consensus        72 ~l~~~~~h~nIv~l~~~~~-~~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHR---DiKPeN  147 (361)
T 4f9c_A           72 CLTVAGGQDNVMGVKYCFR-KNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHR---DVKPSN  147 (361)
T ss_dssp             HHHHTCSBTTBCCCSEEEE-ETTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGG
T ss_pred             HHHHhcCCCCCceEEEEEE-ECCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeC---cCCHHH
Confidence            5666644444445555555 56779999999999988775311              12237777665555   555999


Q ss_pred             EEEcCC-CeEEEeccCCCCCCCchhh---------------------------hhcccCCCCCCcccCccccCCCCCCCC
Q psy17162         70 FHQRLQ-FLLHLFRFALSGNQDDLLI---------------------------IRGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        70 il~~~~-~~~kl~dfg~a~~~~~~~~---------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                      ||++.+ +.+||+|||+|+.......                           ...+..+||+. |+|||++.+   ...
T Consensus       148 iLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~-Y~APE~l~~---~~~  223 (361)
T 4f9c_A          148 FLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPG-FRAPEVLTK---CPN  223 (361)
T ss_dssp             EEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGG-GCCHHHHTT---CSC
T ss_pred             eEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCcc-ccCHHHHcC---CCC
Confidence            999877 8999999999965432110                           01123579999 999999876   135


Q ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHH
Q psy17162        122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i  158 (182)
                      ++.++||||+||++|+|++|++||.+..+..+++.+|
T Consensus       224 y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I  260 (361)
T 4f9c_A          224 QTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQI  260 (361)
T ss_dssp             CCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHH
T ss_pred             CCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            7899999999999999999999997645555555444

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=4.9e-30  Score=191.41  Aligned_cols=140  Identities=13%  Similarity=0.067  Sum_probs=97.6

Q ss_pred             HHhCCCCcEEEEEEeeecCC--CceEEEeccCccchHHHHHHH----------------HHHHHHhhcc-----hhcccc
Q psy17162          6 AVFNQDEIGVTVSSVKTTDD--KKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYH-----LCVRST   62 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~-----~~h~~~   62 (182)
                      ..++|+|++..+......+.  ..++++|||+.+++|.+.+..                ....|||+..     ..++.|
T Consensus        52 ~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiH  131 (303)
T 3hmm_A           52 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH  131 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEEC
T ss_pred             hcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEee
Confidence            35678888755444333222  368899999999999886521                1235888762     235678


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCC--CCCCccchHHHHHHHHHH
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNP--SNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~--~~~~~~~Diwslg~~l~~  137 (182)
                      |||||+|||++.++.+||+|||+|+........   .....+||+. |+|||++.+....  ..++.++|||||||++||
T Consensus       132 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~-ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E  210 (303)
T 3hmm_A          132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR-YMAPEVLDDSINMKHFESFKRADIYAMGLVFWE  210 (303)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGG-GCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccccc-ccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence            888899999999999999999998765332211   1122578999 9999999762110  135678999999999999


Q ss_pred             HHhCCCCCC
Q psy17162        138 LATGRFPYD  146 (182)
Q Consensus       138 l~~g~~pf~  146 (182)
                      |+||.+||.
T Consensus       211 l~tg~~~~~  219 (303)
T 3hmm_A          211 IARRCSIGG  219 (303)
T ss_dssp             HHHTBCBTT
T ss_pred             HHHCCCCCC
Confidence            999977653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=4.8e-29  Score=189.76  Aligned_cols=166  Identities=13%  Similarity=0.182  Sum_probs=120.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+..+++++.+.+... +...++++||+..++++.+.+..                 .++.|||+.+++   |+||
T Consensus        75 ~il~~~~~hp~Iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~giv---HrDl  150 (353)
T 3txo_A           75 RILSLARNHPFLTQLFCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGII---YRDL  150 (353)
T ss_dssp             HHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCC
T ss_pred             HHHHhccCCCceeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCc---ccCC
Confidence            35666644444455556555 56678999999999888765421                 123477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|.+||
T Consensus       151 kp~NILl~~~g~ikL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~G~~Pf  224 (353)
T 3txo_A          151 KLDNVLLDHEGHCKLADFGMCKEGICNGVT-TATFCGTPD-YIAPEILQE----MLYGPAVDWWAMGVLLYEMLCGHAPF  224 (353)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBCSCC----------CCGG-GCCHHHHHH----HHCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHEEECCCCCEEEccccceeecccCCcc-ccccCCCcC-eEChhhcCC----CCcCCccCCCcchHHHHHHHhCCCCC
Confidence            699999999999999999999764433222 223788988 999999987    77899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ |..+++++++++++
T Consensus       225 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  257 (353)
T 3txo_A          225 EA-ENEDDLFEAILNDE-VVY-PTWLHEDATGILKS  257 (353)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            98 46666667776664 445 45689999998864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=1.2e-28  Score=187.58  Aligned_cols=165  Identities=13%  Similarity=0.184  Sum_probs=124.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++..+.++++++.+.+... +...++++||+..++++.+.+..                 .+..|||+.+++   |+|||
T Consensus        73 ~l~~~~~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~giv---HrDlk  148 (353)
T 2i0e_A           73 VLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGII---YRDLK  148 (353)
T ss_dssp             HHTCTTCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCCC
T ss_pred             HHHhcCCCCEEeeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEE---eccCC
Confidence            4555545566666666665 56678999999999888775422                 123477776554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||+++........ ....+|++. |+|||++..    ..++.++|+||+||++|+|++|.+||.
T Consensus       149 p~NIll~~~g~vkL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~G~~Pf~  222 (353)
T 2i0e_A          149 LDNVMLDSEGHIKIADFGMCKENIWDGVT-TKTFCGTPD-YIAPEIIAY----QPYGKSVDWWAFGVLLYEMLAGQAPFE  222 (353)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCCCCTTCC-BCCCCSCGG-GCCHHHHTT----CCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEEcCCCcEEEEeCCcccccccCCcc-cccccCCcc-ccChhhhcC----CCcCCcccccchHHHHHHHHcCCCCCC
Confidence            99999999999999999999764332221 223688888 999999987    788999999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+..+. +.+ |..+|+++++++++
T Consensus       223 ~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  254 (353)
T 2i0e_A          223 G-EDEDELFQSIMEHN-VAY-PKSMSKEAVAICKG  254 (353)
T ss_dssp             C-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHH
Confidence            8 45656666666654 456 45689999998864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=2.4e-28  Score=185.32  Aligned_cols=164  Identities=14%  Similarity=0.198  Sum_probs=122.2

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++... +|++++ .+.+... +...++++||+..++++.+.+..                 .+..|||+.+++   |+|+
T Consensus        70 il~~~~~hp~iv-~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---HrDl  144 (345)
T 1xjd_A           70 VLSLAWEHPFLT-HMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIV---YRDL  144 (345)
T ss_dssp             HHHHHTTCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCC
T ss_pred             HHHhcCCCCCCC-cEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---eCCC
Confidence            45555 565554 5555555 46678999999999888775422                 123477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       145 kp~NIll~~~g~vkL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~Pf  218 (345)
T 1xjd_A          145 KLDNILLDKDGHIKIADFGMCKENMLGDAK-TNTFCGTPD-YIAPEILLG----QKYNHSVDWWSFGVLLYEMLIGQSPF  218 (345)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBCCCCTTCC-BCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ChhhEEECCCCCEEEeEChhhhhcccCCCc-ccCCCCCcc-cCChhhhcC----CCCCChhhhHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999764332221 233688888 999999988    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. +.+ |..+|++++++|++
T Consensus       219 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  251 (345)
T 1xjd_A          219 HG-QDEEELFHSIRMDN-PFY-PRWLEKEAKDLLVK  251 (345)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHhCC-CCC-CcccCHHHHHHHHH
Confidence            88 45556666665554 555 56689999999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=1.9e-28  Score=200.02  Aligned_cols=165  Identities=13%  Similarity=0.184  Sum_probs=126.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      ++..+.++++++.+..... +...++++||+..+++|.+.+..                 .++.|||+.+++   |||||
T Consensus       394 ~l~~~~~~~~i~~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIi---HrDLK  469 (674)
T 3pfq_A          394 VLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGII---YRDLK  469 (674)
T ss_dssp             HHTCTTCCTTBCCEEEECB-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEE---CCCCC
T ss_pred             HHHhccCCCeEEEEEEEEE-eCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---eccCC
Confidence            5555666777777776666 56678999999999888775422                 123477777655   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+|||++.++.+||+|||+++........ ....+|++. |+|||++..    ..++.++|+||+||++|+|++|.+||.
T Consensus       470 p~NILl~~~g~ikL~DFGla~~~~~~~~~-~~~~~GT~~-Y~APE~l~~----~~~~~~~DvwSlGvilyelltG~~Pf~  543 (674)
T 3pfq_A          470 LDNVMLDSEGHIKIADFGMCKENIWDGVT-TKTFCGTPD-YIAPEIIAY----QPYGKSVDWWAFGVLLYEMLAGQAPFE  543 (674)
T ss_dssp             STTEEECSSSCEEECCCTTCEECCCTTCC-BCCCCSCSS-SCCHHHHTC----CCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hhhEEEcCCCcEEEeecceeeccccCCcc-cccccCCCc-ccCHhhhcC----CCCCccceEechHHHHHHHHcCCCCCC
Confidence            99999999999999999999754332221 233789998 999999988    789999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + .+..+....|..+. ..+ |..+|+++++||++
T Consensus       544 ~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  575 (674)
T 3pfq_A          544 G-EDEDELFQSIMEHN-VAY-PKSMSKEAVAICKG  575 (674)
T ss_dssp             C-SSHHHHHHHHHSSC-CCC-CTTSCHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHhCC-CCC-CccCCHHHHHHHHH
Confidence            8 46666666676654 556 45789999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.96  E-value=5.8e-28  Score=182.71  Aligned_cols=165  Identities=13%  Similarity=0.206  Sum_probs=122.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|++++.. .+... +...++++||+..++++.+.+..                 .++.|||+.+++   |+||
T Consensus        57 ~~l~~l~hp~iv~l-~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---HrDl  131 (337)
T 1o6l_A           57 RVLQNTRHPFLTAL-KYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV---YRDI  131 (337)
T ss_dssp             HHHHSCCCTTBCCE-EEEEE-CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCC
T ss_pred             HHHHhCCCCcCcce-EEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee---cCcC
Confidence            46677788777644 44444 45678999999998888664321                 123477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       132 kp~NIll~~~g~vkL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~Pf  205 (337)
T 1o6l_A          132 KLENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBCSCCTTCC-BCCCEECGG-GCCGGGGSS----SCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHEEECCCCCEEEeeccchhhcccCCCc-ccccccChh-hCChhhhcC----CCCCchhhcccchhHHHHHhcCCCCC
Confidence            699999999999999999999764332221 223678888 999999987    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .........+..+. ..+ |..+|++++++|++
T Consensus       206 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  238 (337)
T 1o6l_A          206 YN-QDHERLFELILMEE-IRF-PRTLSPEAKSLLAG  238 (337)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            88 45555555555553 455 45689999998864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=5.1e-28  Score=186.50  Aligned_cols=166  Identities=17%  Similarity=0.242  Sum_probs=119.1

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..++++...+..                 .++.|||+.+++   |+||
T Consensus       105 il~~~~~hp~Iv-~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~giv---HrDL  179 (396)
T 4dc2_A          105 VFEQASNHPFLV-GLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGII---YRDL  179 (396)
T ss_dssp             HHHHHTTCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCC
T ss_pred             HHHhcCCCCCcC-eeEEEEE-ECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEE---eccC
Confidence            55555 555554 5555555 56678999999999888664321                 123477776654   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|.+||
T Consensus       180 Kp~NILl~~~g~ikL~DFGla~~~~~~~~~-~~~~~gt~~-Y~aPE~l~~----~~~~~~~DiwslGvllyell~G~~Pf  253 (396)
T 4dc2_A          180 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSTFCGTPN-YIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSPF  253 (396)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBCCCCTTCC-BCCCCBCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHEEECCCCCEEEeecceeeecccCCCc-cccccCCcc-cCCchhhcC----CCCChHHHHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999999763332221 233788888 999999988    78899999999999999999999999


Q ss_pred             CCCC-------CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~-------~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+..       ...+.+...+....+.+ |..+|++++++|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-p~~~s~~~~~li~~  295 (396)
T 4dc2_A          254 DIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSLSVKAASVLKS  295 (396)
T ss_dssp             TTTTC------CCHHHHHHHHHHCCCCC-CTTSCHHHHHHHHH
T ss_pred             cccccccccchhhHHHHHHHHhccccCC-CCcCCHHHHHHHHH
Confidence            6421       12233334333444566 45689999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=2.4e-28  Score=189.11  Aligned_cols=172  Identities=19%  Similarity=0.227  Sum_probs=125.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|+|++.. .+... +...++++||+..++++.+.+..                .+..|||+.++   .|+|||
T Consensus       121 ~il~~l~hp~Iv~l-~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~gi---vHrDLK  195 (410)
T 3v8s_A          121 DIMAFANSPWVVQL-FYAFQ-DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---IHRDVK  195 (410)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-CSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCS
T ss_pred             HHHHhCCCCCCCeE-EEEEE-ECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCC
Confidence            47778888777644 44444 56778999999999888775421                12347777655   455566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||+++.............+|++. |+|||++........++.++|+||+||++|+|++|.+||.
T Consensus       196 p~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~-Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  274 (410)
T 3v8s_A          196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  274 (410)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGG-GCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             HHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCcc-ccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence            999999999999999999997655433222234789998 9999999862211227789999999999999999999999


Q ss_pred             CCCCcHHHHHHHhhCC-CCCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDD-PPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~-~~~~~-~~~~s~~~~~~i~~  181 (182)
                      + ....+...++..+. ...+| ...+|++++++|++
T Consensus       275 ~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  310 (410)
T 3v8s_A          275 A-DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA  310 (410)
T ss_dssp             C-SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred             C-CChhhHHHHHHhccccccCCCcccccHHHHHHHHH
Confidence            8 56666677776532 23343 23689999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.95  E-value=9.4e-28  Score=180.96  Aligned_cols=163  Identities=21%  Similarity=0.294  Sum_probs=122.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 .+..|||+.+++   |+|+|
T Consensus        67 ~l~~l~hpnIv~-l~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~iv---HrDlk  141 (328)
T 3fe3_A           67 IMKILNHPNIVK-LFEVIE-TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV---HRDLK  141 (328)
T ss_dssp             HHHHCCCTTBCC-EEEEEE-CSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCC---CSCCC
T ss_pred             HHHhCCCCCEee-EEEEEE-ECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEe---ccCCC
Confidence            677888887764 444444 56678999999988888775421                 113477776555   55555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.+||+|||++........  ....+|++. |+|||++.+    ..+. .++|+||+||++|+|++|..||
T Consensus       142 p~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~~DiwslG~il~ell~g~~pf  214 (328)
T 3fe3_A          142 AENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPP-YAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGSLPF  214 (328)
T ss_dssp             GGGEEECTTSCEEECSTTCCGGGSSSCG--GGTTSSSGG-GCCHHHHHT----CCCCSHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HHHEEEcCCCCEEEeeccCceecCCCCc--cccccCCcc-eeCcccccC----CCcCCchhhhhhhHHHHHHHHhCCCCC
Confidence            9999999999999999999976544332  233678888 999999987    5554 7899999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ |..+|+++++++++
T Consensus       215 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  247 (328)
T 3fe3_A          215 DG-QNLKELRERVLRGK-YRI-PFYMSTDCENLLKR  247 (328)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHH
Confidence            98 45556666666664 445 45689999998864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=2.5e-28  Score=190.36  Aligned_cols=172  Identities=18%  Similarity=0.244  Sum_probs=123.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .++..+.|+|++. +.+... +...++++||+..++++.+.+..                  .+..|||+.++   .|||
T Consensus       126 ~il~~~~hp~Iv~-l~~~~~-~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gi---iHrD  200 (437)
T 4aw2_A          126 DVLVNGDSKWITT-LHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---VHRD  200 (437)
T ss_dssp             HHHHHSCTTTBCC-EEEEEE-CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHHhCCCCCEEE-EEEEEe-eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCe---Eecc
Confidence            4667777777654 444444 56678999999999888775422                  12347776655   5556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCC-CCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPS-GNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |||+||+++.++.+||+|||+++.............+|++. |+|||++... .....++.++|+||+||++|+|++|.+
T Consensus       201 LKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~-Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~  279 (437)
T 4aw2_A          201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD-YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET  279 (437)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGG-GCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcC-eeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCC
Confidence            66999999999999999999997654433222333688988 9999998610 001568899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhC-CCCCCC--CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQD-DPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~-~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+...+++.. ....+|  ...+|+++++||++
T Consensus       280 Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~  319 (437)
T 4aw2_A          280 PFYA-ESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRR  319 (437)
T ss_dssp             TTCC-SSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHT
T ss_pred             CCCC-CChhHHHHhhhhccccccCCcccccCCHHHHHHHHH
Confidence            9998 5666666666542 123333  23589999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.95  E-value=1.9e-27  Score=178.64  Aligned_cols=162  Identities=17%  Similarity=0.285  Sum_probs=123.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++.+.+..                 .+..|||+.++   .|+|+
T Consensus        58 ~~l~~l~hp~Iv~~-~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDl  132 (318)
T 1fot_A           58 LMLSIVTHPFIIRM-WGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI---IYRDL  132 (318)
T ss_dssp             HHHHSCCBTTBCCE-EEEEE-CSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCC
T ss_pred             HHHhhCCCCCCceE-eEEEE-eCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCC
Confidence            36677788777644 44444 56678999999998888775421                 12347776655   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......    ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       133 kp~NIll~~~g~~kL~Dfg~a~~~~~~----~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~pf  203 (318)
T 1fot_A          133 KPENILLDKNGHIKITDFGFAKYVPDV----TYTLCGTPD-YIAPEVVST----KPYNKSIDWWSFGILIYEMLAGYTPF  203 (318)
T ss_dssp             CGGGEEECTTSCEEECCCSSCEECSSC----BCCCCSCTT-TCCHHHHTT----CCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             ChheEEEcCCCCEEEeecCcceecCCc----cccccCCcc-ccCHhHhcC----CCCCcccchhhhHHHHHHHHhCCCCC
Confidence            699999999999999999999765432    223678888 999999988    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ |..+|+++++++++
T Consensus       204 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  236 (318)
T 1fot_A          204 YD-SNTMKTYEKILNAE-LRF-PPFFNEDVKDLLSR  236 (318)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHH
Confidence            88 45666666676664 445 45689999998864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.95  E-value=2.7e-27  Score=179.60  Aligned_cols=166  Identities=17%  Similarity=0.241  Sum_probs=117.7

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..++++.+.+..                 .+..|||+.++   .|+||
T Consensus        62 ~l~~~~~hp~iv-~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDl  136 (345)
T 3a8x_A           62 VFEQASNHPFLV-GLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI---IYRDL  136 (345)
T ss_dssp             HHHHTTTCTTBC-CEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---BCCCC
T ss_pred             HHHhcCCCCccC-eEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCC
Confidence            55555 565554 5555554 56778999999998888765421                 12347777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       137 kp~NIll~~~g~~kL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~pf  210 (345)
T 3a8x_A          137 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSTFCGTPN-YIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSPF  210 (345)
T ss_dssp             CGGGEEECTTSCEEECCGGGCBCSCCTTCC-BCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CHHHEEECCCCCEEEEeccccccccCCCCc-ccccCCCcc-ccCccccCC----CCCChHHhHHHHHHHHHHHHhCCCCc
Confidence            699999999999999999999764332221 233688888 999999988    78899999999999999999999999


Q ss_pred             CCCC-------CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWG-------SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~-------~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ....       .....+...+......+ |..+|+++++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-p~~~s~~~~~li~~  252 (345)
T 3a8x_A          211 DIVGSSDNPDQNTEDYLFQVILEKQIRI-PRSLSVKAASVLKS  252 (345)
T ss_dssp             TTTTC-------CHHHHHHHHHHCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCcccccccccccHHHHHHHHHcCCCCC-CCCCCHHHHHHHHH
Confidence            6521       12223333333334556 45689999998864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.4e-27  Score=184.92  Aligned_cols=172  Identities=17%  Similarity=0.188  Sum_probs=121.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .++..++|++++. +..... +...++++||+..++++.+.+..                  .+..|||+.++   .|+|
T Consensus       113 ~il~~~~hp~Iv~-l~~~~~-~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi---iHrD  187 (412)
T 2vd5_A          113 DVLVNGDRRWITQ-LHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY---VHRD  187 (412)
T ss_dssp             HHHHHSCTTTBCC-EEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHHhcCCCCeee-EEEEEe-eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecc
Confidence            4667777766654 444444 56778999999998888775422                  12346776654   5556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCC---CCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPS---GNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |||+||+++.++.+||+|||+++.............+|++. |+|||++...   .....++.++|+||+||++|+|++|
T Consensus       188 LKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~-Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG  266 (412)
T 2vd5_A          188 IKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD-YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG  266 (412)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGG-GCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS
T ss_pred             cCHHHeeecCCCCEEEeechhheeccCCCccccceeccccC-cCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC
Confidence            66999999999999999999997655433222233688888 9999998720   0014678999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhC-CCCCCC--CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQD-DPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~-~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .+||.+ ....+...++... ....+|  +..+|++++++|++
T Consensus       267 ~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~  308 (412)
T 2vd5_A          267 QTPFYA-DSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQR  308 (412)
T ss_dssp             SCTTCC-SSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHT
T ss_pred             CCCCCC-CCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHH
Confidence            999988 4566666666542 112232  35789999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=1.5e-27  Score=182.72  Aligned_cols=162  Identities=14%  Similarity=0.158  Sum_probs=120.1

Q ss_pred             HHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCC
Q psy17162          6 AVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      +.++|++++ .+.+... +...++++||+..++++.+.+..                 .++.|||+.+++   |+||||+
T Consensus        94 ~~~~hp~Iv-~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~giv---HrDlkp~  168 (373)
T 2r5t_A           94 KNVKHPFLV-GLHFSFQ-TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIV---YRDLKPE  168 (373)
T ss_dssp             CCCCCTTBC-CEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCCCGG
T ss_pred             HhCCCCCCC-CEEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce---ecCCCHH
Confidence            446666665 4444444 46678999999999888765421                 123477776655   5556699


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      ||+++.++.+||+|||+++........ ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||.+ 
T Consensus       169 NIll~~~g~ikL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~G~~Pf~~-  241 (373)
T 2r5t_A          169 NILLDSQGHIVLTDFGLCKENIEHNST-TSTFCGTPE-YLAPEVLHK----QPYDRTVDWWCLGAVLYEMLYGLPPFYS-  241 (373)
T ss_dssp             GEEECTTSCEEECCCCBCGGGBCCCCC-CCSBSCCCC-CCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHSSCTTCC-
T ss_pred             HEEECCCCCEEEeeCccccccccCCCc-cccccCCcc-ccCHHHhCC----CCCCchhhhHHHHHHHHHHHcCCCCCCC-
Confidence            999999999999999998753322211 233788988 999999988    7889999999999999999999999988 


Q ss_pred             CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        149 GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       149 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ....+....+..+. ..+ +..+|++++++|++
T Consensus       242 ~~~~~~~~~i~~~~-~~~-~~~~~~~~~~li~~  272 (373)
T 2r5t_A          242 RNTAEMYDNILNKP-LQL-KPNITNSARHLLEG  272 (373)
T ss_dssp             SBHHHHHHHHHHSC-CCC-CSSSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcc-cCC-CCCCCHHHHHHHHH
Confidence            45556666666654 445 45689999998863

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.95  E-value=2.2e-27  Score=176.58  Aligned_cols=166  Identities=17%  Similarity=0.255  Sum_probs=122.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++..+ +... +...+++++|+..++++.+.+..                ....|||+.+++|   +|+||
T Consensus        70 ~l~~l~hp~iv~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H---~Dlkp  144 (297)
T 3fxz_A           70 VMRENKNPNIVNYL-DSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH---RDIKS  144 (297)
T ss_dssp             HHHHCCCTTBCCEE-EEEE-ETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC---CCCSG
T ss_pred             HHhcCCCCCCCeEe-EEEE-ECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcee---CCCCH
Confidence            56778888876544 4333 35568899999988888775421                1234777776554   55559


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.+||+|||++......... .....|++. |+|||++.+    ..++.++|+||+||++|+|++|..||.+
T Consensus       145 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~pf~~  218 (297)
T 3fxz_A          145 DNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPY-WMAPEVVTR----KAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (297)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCGG-GCCHHHHHC----SCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HHEEECCCCCEEEeeCCCceecCCcccc-cCCccCCcC-ccChhhhcC----CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999998765543321 223678888 999999988    7889999999999999999999999988


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                       ..+......+.....+.++ +..+|+.+++++++
T Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  252 (297)
T 3fxz_A          219 -ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  252 (297)
T ss_dssp             -SCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHH
T ss_pred             -CCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHH
Confidence             4555555555544434332 45788999998763

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.95  E-value=6.8e-27  Score=176.12  Aligned_cols=165  Identities=15%  Similarity=0.152  Sum_probs=118.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++..+ +... +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        73 ~~l~~l~hp~iv~~~-~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv---H~Dl  147 (327)
T 3a62_A           73 NILEEVKHPFIVDLI-YAFQ-TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII---YRDL  147 (327)
T ss_dssp             HHHHHCCCTTBCCEE-EEEE-CSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCC
T ss_pred             HHHHhCCCCCcccee-EEEE-cCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEE---cccC
Confidence            467888888876544 4443 45678999999988887765421                 123477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... ....+|++. |+|||++..    ..++.++|+||+|+++|+|++|..||
T Consensus       148 kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~pf  221 (327)
T 3a62_A          148 KPENIMLNHQGHVKLTDFGLCKESIHDGTV-THTFCGTIE-YMAPEILMR----SGHNRAVDWWSLGALMYDMLTGAPPF  221 (327)
T ss_dssp             CTTTEEECTTSCEEECCCSCC-----------CTTSSCCT-TSCHHHHTT----SCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CHHHeEECCCCcEEEEeCCcccccccCCcc-ccccCCCcC-ccCHhhCcC----CCCCCcccchhHHHHHHHHHHCCCCC
Confidence            699999999999999999998764433221 222678888 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ |..+++++++++++
T Consensus       222 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  254 (327)
T 3a62_A          222 TG-ENRKKTIDKILKCK-LNL-PPYLTQEARDLLKK  254 (327)
T ss_dssp             CC-SSHHHHHHHHHHTC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHhCC-CCC-CCCCCHHHHHHHHH
Confidence            88 45556666666654 445 45689999998863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.95  E-value=3.9e-27  Score=179.01  Aligned_cols=162  Identities=20%  Similarity=0.295  Sum_probs=123.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|++++. +.+... +...++++||+..++++.+.+..                 .++.|||+.++   .|+||
T Consensus        93 ~~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDl  167 (350)
T 1rdq_E           93 RILQAVNFPFLVK-LEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL---IYRDL  167 (350)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCC
T ss_pred             HHHHhCCCCCCCe-EEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccC
Confidence            4667777877764 444444 46678999999998888775432                 12347776655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++.......    ...+|++. |+|||++.+    ..++.++|+||+||++|+|++|.+||
T Consensus       168 kp~NIll~~~g~~kL~DFg~a~~~~~~~----~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~Pf  238 (350)
T 1rdq_E          168 KPENLLIDQQGYIQVTDFGFAKRVKGRT----WTLCGTPE-ALAPEIILS----KGYNKAVDWWALGVLIYEMAAGYPPF  238 (350)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECSSCB----CCCEECGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccceEEECCCCCEEEcccccceeccCCc----ccccCCcc-ccCHHHhcC----CCCCCcCCEecccHhHhHHhhCCCCC
Confidence            6999999999999999999997654322    23678888 999999988    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ |..+|++++++|++
T Consensus       239 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  271 (350)
T 1rdq_E          239 FA-DQPIQIYEKIVSGK-VRF-PSHFSSDLKDLLRN  271 (350)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTCCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            88 46666666676664 455 45689999998864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.95  E-value=1.1e-26  Score=178.50  Aligned_cols=169  Identities=17%  Similarity=0.244  Sum_probs=119.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .+... +...+++++++..++++.+.+..                 .+..|||+.+++   |+||
T Consensus        67 ~il~~l~hp~Iv~l-~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~giv---HrDl  141 (384)
T 4fr4_A           67 QIMQGLEHPFLVNL-WYSFQ-DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRII---HRDM  141 (384)
T ss_dssp             HHHHTCCCTTBCCE-EEEEE-CSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhCCCCCCCcE-EEEEE-eCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce---eccC
Confidence            46777888877644 34444 45678999999999888764311                 123477777655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++........  ....+|++. |+|||++.... ...++.++|+||+||++|+|++|..||
T Consensus       142 kp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~gt~~-Y~aPE~~~~~~-~~~~~~~~DiwSlG~il~elltG~~Pf  217 (384)
T 4fr4_A          142 KPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKP-YMAPEMFSSRK-GAGYSFAVDWWSLGVTAYELLRGRRPY  217 (384)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECCTTCC--BCCCCSCGG-GCCGGGTCCCS-SCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cHHHeEECCCCCEEEeccceeeeccCCCc--eeccCCCcc-ccCCeeeccCC-CCCCCccceeechHHHHHHHHhCCCCC
Confidence            69999999999999999999976554332  334788888 99999987411 145789999999999999999999999


Q ss_pred             CCCC-CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWG-SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~-~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+.. ................+ |..+|++++++|++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-p~~~s~~~~~li~~  253 (384)
T 4fr4_A          218 HIRSSTSSKEIVHTFETTVVTY-PSAWSQEMVSLLKK  253 (384)
T ss_dssp             CCCTTSCHHHHHHHHHHCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHhhcccCC-CCcCCHHHHHHHHH
Confidence            7521 22233333333334555 45689999998864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.95  E-value=1e-26  Score=181.73  Aligned_cols=167  Identities=13%  Similarity=0.141  Sum_probs=122.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.+... +...+++++|++.++++.+.+..                 .+..|||+.+++|   +||
T Consensus        62 ~il~~l~hpnIv~-l~~~~~-~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givH---rDl  136 (444)
T 3soa_A           62 RICRLLKHPNIVR-LHDSIS-EEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH---RNL  136 (444)
T ss_dssp             HHHHHCCBTTBCC-EEEEEE-CSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBC---CCC
T ss_pred             HHHHhCCCcCCCe-EEEEEE-ECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cCC
Confidence            3678888888764 444444 56778999999999888664311                 1134777776555   555


Q ss_pred             CCCcEEEc---CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQR---LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~---~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||+++   .++.+||+|||++......... ....+|++. |+|||++..    ..++.++||||+||++|+|++|.
T Consensus       137 Kp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~-~~~~~gt~~-Y~APE~l~~----~~~~~~~DIwSlGvilyell~G~  210 (444)
T 3soa_A          137 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQA-WFGFAGTPG-YLSPEVLRK----DPYGKPVDLWACGVILYILLVGY  210 (444)
T ss_dssp             SSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB-CCCSCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEEeccCCCCcEEEccCceeEEecCCCce-eecccCCcc-cCCHHHhcC----CCCCCccccHHHHHHHHHHHhCC
Confidence            59999998   4578999999999776543321 223678888 999999987    78899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+....+..+......  ...+|++++++|++
T Consensus       211 ~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  250 (444)
T 3soa_A          211 PPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK  250 (444)
T ss_dssp             CSCCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             CCCCC-ccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHH
Confidence            99988 4565666666665432111  23689999998864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=7.1e-27  Score=178.27  Aligned_cols=165  Identities=18%  Similarity=0.182  Sum_probs=122.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|+|++. +.++.. +...+++++|+..++++.+.+..                 .+..|||+.+++   |+|+
T Consensus        67 ~il~~l~hpnIv~-l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv---HrDl  141 (361)
T 2yab_A           67 SILRQVLHPNIIT-LHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA---HFDL  141 (361)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhCCCcCCCc-EEEEEE-eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc---cCCC
Confidence            3567788877764 445544 46678999999998888775410                 123477777655   5555


Q ss_pred             CCCcEEEcCCC----eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         66 SVDTFHQRLQF----LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        66 k~~nil~~~~~----~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ||+||+++.++    .+||+|||++........  ....+|++. |+|||++..    ..++.++|+||+||++|+|++|
T Consensus       142 kp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslGvil~~ll~g  214 (361)
T 2yab_A          142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPE-FVAPEIVNY----EPLGLEADMWSIGVITYILLSG  214 (361)
T ss_dssp             SGGGEEESCTTSSSCCEEECCCSSCEECCTTCC--CCCCCSCGG-GCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CHHHEEEeCCCCCccCEEEEecCCceEcCCCCc--cccCCCCcc-EECchHHcC----CCCCccccHHHHHHHHHHHHhC
Confidence            69999998776    799999999977654332  233678888 999999987    7889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      .+||.+ ....+....+..+. ..++   +..+|+++++||++
T Consensus       215 ~~Pf~~-~~~~~~~~~i~~~~-~~~~~~~~~~~s~~~~~li~~  255 (361)
T 2yab_A          215 ASPFLG-DTKQETLANITAVS-YDFDEEFFSQTSELAKDFIRK  255 (361)
T ss_dssp             CCSSCC-SSHHHHHHHHHTTC-CCCCHHHHTTSCHHHHHHHHH
T ss_pred             CCCCCC-CCHHHHHHHHHhcC-CCCCchhccCCCHHHHHHHHH
Confidence            999988 45656666666554 3333   24689999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.94  E-value=2.4e-26  Score=175.46  Aligned_cols=163  Identities=16%  Similarity=0.196  Sum_probs=120.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++. +.+... +...+++++|+..++++.+.+                   .+  ..|||+.+++|   +
T Consensus        80 ~il~~l~hpnIv~-~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~a--l~~lH~~~ivH---~  152 (362)
T 2bdw_A           80 RICRKLQHPNIVR-LHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES--IAYCHSNGIVH---R  152 (362)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-CSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHH--HHHHHHTTCBC---C
T ss_pred             HHHHhCCCCCCCe-EEEEEE-eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH--HHHHHHCCeEe---c
Confidence            3677788888764 444444 456788999999988886643                   22  34777776555   5


Q ss_pred             CCCCCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      ||||+||+++.+   +.+||+|||++........  ....+|++. |+|||++..    ..++.++|+||+||++|+|++
T Consensus       153 Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~~ll~  225 (362)
T 2bdw_A          153 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPG-YLSPEVLKK----DPYSKPVDIWACGVILYILLV  225 (362)
T ss_dssp             CCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS--CCCSCSCTT-TCCHHHHTT----CCCCTHHHHHHHHHHHHHHHH
T ss_pred             cCchHHEEEecCCCCCCEEEeecCcceEecCCcc--cccCCCCcc-ccCHHHHcc----CCCCchhhHHHHHHHHHHHHH
Confidence            555999999865   4599999999977654332  233678888 999999987    788999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      |.+||.+ .........+..+.. .++.   ..+|++++++|++
T Consensus       226 g~~Pf~~-~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~  267 (362)
T 2bdw_A          226 GYPPFWD-EDQHRLYAQIKAGAY-DYPSPEWDTVTPEAKSLIDS  267 (362)
T ss_dssp             SSCSSCC-SSHHHHHHHHHHTCC-CCCTTGGGGSCHHHHHHHHH
T ss_pred             CCCCCCC-CCHHHHHHHHHhCCC-CCCcccccCCCHHHHHHHHH
Confidence            9999988 455566666665542 2322   3578999998863

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.94  E-value=1.1e-26  Score=181.73  Aligned_cols=164  Identities=12%  Similarity=0.203  Sum_probs=119.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhh-cchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQD-YHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~-~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .+... +...++++||+..++++.+.+..                 .++.|||+ .++   .|+||
T Consensus       201 ~l~~l~h~~iv~l-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~gi---iHrDl  275 (446)
T 4ejn_A          201 VLQNSRHPFLTAL-KYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV---VYRDL  275 (446)
T ss_dssp             CCCCCSCTTSCCE-EEEEE-ETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCC---CCCCC
T ss_pred             HHHhCCCCeEeeE-EEEEe-eCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCE---EECCC
Confidence            4556777777644 34443 45568999999998888664321                 12347776 544   55566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|..||
T Consensus       276 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~Pf  349 (446)
T 4ejn_A          276 KLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF  349 (446)
T ss_dssp             CGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGG-GCCHHHHHT----SCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHEEECCCCCEEEccCCCceeccCCCcc-cccccCCcc-ccCHhhcCC----CCCCCccchhhhHHHHHHHhhCCCCC
Confidence            699999999999999999999764433222 233788888 999999988    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .........+..+. ..+ |..+|++++++|++
T Consensus       350 ~~-~~~~~~~~~i~~~~-~~~-p~~~~~~~~~li~~  382 (446)
T 4ejn_A          350 YN-QDHEKLFELILMEE-IRF-PRTLGPEAKSLLSG  382 (446)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHhCC-CCC-CccCCHHHHHHHHH
Confidence            88 45545555555544 445 45689999998864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.94  E-value=1.8e-26  Score=183.88  Aligned_cols=166  Identities=17%  Similarity=0.171  Sum_probs=120.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|++++.. ..... +...++++||+..++++.+.+..                     .+..|||+.++   .
T Consensus       237 ~iL~~l~hp~Iv~l-~~~~~-~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gI---v  311 (543)
T 3c4z_A          237 KILAKVHSRFIVSL-AYAFE-TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI---I  311 (543)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-CSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTE---E
T ss_pred             HHHHhcCCCCEeeE-EEEEe-eCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCC---c
Confidence            46778888777644 34443 45678999999988887654311                     12347777655   4


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+|+||+||+++.+|.+||+|||++......... ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|
T Consensus       312 HrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~-~~~~~GT~~-Y~APE~l~~----~~~~~~~DiwSlGvilyelltG  385 (543)
T 3c4z_A          312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG-FMAPELLLG----EEYDFSVDYFALGVTLYEMIAA  385 (543)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC-BCCCCSCTT-TSCHHHHTT----CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccCCChHHEEEeCCCCEEEeecceeeeccCCCcc-cccccCCcc-ccChhhhcC----CCCChHHhcCcchHHHHHHHhC
Confidence            5556699999999999999999999775543321 222588988 999999988    7889999999999999999999


Q ss_pred             CCCCCCCC---CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWG---SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~---~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+||.+..   ...+....+..+ ...+ |..+|++++++|++
T Consensus       386 ~~PF~~~~~~~~~~~~~~~i~~~-~~~~-p~~~s~~~~~li~~  426 (543)
T 3c4z_A          386 RGPFRARGEKVENKELKQRVLEQ-AVTY-PDKFSPASKDFCEA  426 (543)
T ss_dssp             SCSSCCTTCCCCHHHHHHHHHHC-CCCC-CTTSCHHHHHHHHH
T ss_pred             CCCCCCCccchhHHHHHHHHhhc-ccCC-CcccCHHHHHHHHH
Confidence            99998732   223344444444 3455 45689999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=1.5e-26  Score=171.79  Aligned_cols=166  Identities=16%  Similarity=0.240  Sum_probs=114.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.+... +...+++++|+..++++.+.+..                 ....|+|+.+++   |+|+|
T Consensus        64 ~l~~l~hp~iv-~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~---H~Dlk  138 (294)
T 4eqm_A           64 NSSQLSHQNIV-SMIDVDE-EDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV---HRDIK  138 (294)
T ss_dssp             HHTTCCBTTBC-CEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCCC
T ss_pred             HHhcCCCCCCc-eEEEeee-eCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc---cCCCC
Confidence            45667787776 4445544 56678899999998888775421                 113477776654   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++...............|++. |+|||++.+    ..++.++|+||+|+++|+|++|..||.
T Consensus       139 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~ll~g~~pf~  213 (294)
T 4eqm_A          139 PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ-YFSPEQAKG----EATDECTDIYSIGIVLYEMLVGEPPFN  213 (294)
T ss_dssp             GGGEEECTTSCEEECCCSSSTTC-------------CCS-SCCHHHHHT----CCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             HHHEEECCCCCEEEEeCCCccccccccccccCccccCcc-ccCHhHhcC----CCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999997765433221223568888 999999988    778899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFIT  180 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~  180 (182)
                      + ............+..+..+   +..+|+.+.+++.
T Consensus       214 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  249 (294)
T 4eqm_A          214 G-ETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVIL  249 (294)
T ss_dssp             S-SCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHH
T ss_pred             C-CChHHHHHHHhhccCCCcchhcccCCCHHHHHHHH
Confidence            8 4554555555554434332   2457888888775

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.94  E-value=4.1e-26  Score=169.51  Aligned_cols=165  Identities=15%  Similarity=0.235  Sum_probs=116.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHH------------------HHHHHHHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQ------------------KELETLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------------~~l~~~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++..+..+.......+++++|+...+++.                  +.+.++.  |||+.+++|   +|+
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~--~lH~~~ivH---~Dl  163 (298)
T 2zv2_A           89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIE--YLHYQKIIH---RDI  163 (298)
T ss_dssp             HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHH--HHHHTTEEC---CCC
T ss_pred             HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHH--HHHHCCeec---cCC
Confidence            66778888877554444444467788999987655432                  2234444  888776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCC---CCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSN---YDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~---~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||+++.++.+||+|||++......... .....|++. |+|||++..    ..   ++.++|+||+||++|+|++|.
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~~~~Di~slG~~l~~l~~g~  237 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPA-FMAPESLSE----TRKIFSGKALDVWAMGVTLYCFVFGQ  237 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGG-GCCGGGCCT----TCCCEESHHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEECCCCCEEEecCCCcccccccccc-ccCCcCCcc-ccChhhhcc----CCCCCCCchhhhHhHHHHHHHHHHCC
Confidence            599999999999999999998765443221 122578888 999999876    33   367899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      .||.+ .........+..+. ..++ +..+|+++++++++
T Consensus       238 ~pf~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~  275 (298)
T 2zv2_A          238 CPFMD-ERIMCLHSKIKSQA-LEFPDQPDIAEDLKDLITR  275 (298)
T ss_dssp             CSSCC-SSHHHHHHHHHHCC-CCCCSSSCCCHHHHHHHHH
T ss_pred             CCCCC-ccHHHHHHHHhccc-CCCCCccccCHHHHHHHHH
Confidence            99987 34444444444443 3333 34688999998863

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.94  E-value=1.5e-26  Score=185.07  Aligned_cols=166  Identities=13%  Similarity=0.162  Sum_probs=122.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+... +...++++||+..++++.+.+..                   .+..|||+.++   .|+
T Consensus       236 ~iL~~l~hp~Iv~l-~~~~~-~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI---vHr  310 (576)
T 2acx_A          236 QILEKVNSRFVVSL-AYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI---VYR  310 (576)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECC
T ss_pred             HHHHHcCCCCEeeE-EEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecc
Confidence            47788888877644 34443 45678999999988888664310                   12347777755   455


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||||+||+++.++.+||+|||++........  ....+|++. |+|||++.+    ..++.++|+||+||++|+|++|.+
T Consensus       311 DLKPeNILld~~g~vKL~DFGla~~~~~~~~--~~~~~GT~~-Y~APEvl~~----~~~~~~~DiwSLGvilyeLltG~~  383 (576)
T 2acx_A          311 DLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVG-YMAPEVVKN----ERYTFSPDWWALGCLLYEMIAGQS  383 (576)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEECCTTCC--EECCCSCGG-GCCHHHHTT----CEESSHHHHHHHHHHHHHHHHSSC
T ss_pred             CCchheEEEeCCCCeEEEecccceecccCcc--ccccCCCcc-ccCHHHHcC----CCCCccchHHHHHHHHHHHHhCCC
Confidence            5669999999999999999999977654332  223678888 999999988    788999999999999999999999


Q ss_pred             CCCCCCC--cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGS--PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~--~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+...  ....+...+...+..+ +..+|++++++|++
T Consensus       384 PF~~~~~~~~~~~i~~~i~~~~~~~-p~~~s~~~~dLI~~  422 (576)
T 2acx_A          384 PFQQRKKKIKREEVERLVKEVPEEY-SERFSPQARSLCSQ  422 (576)
T ss_dssp             SSSCSSSCCCHHHHHHHHHHCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCcccccchhHHHHHHHhhcccccC-CccCCHHHHHHHHH
Confidence            9987321  2333444344444556 46789999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.94  E-value=4.8e-26  Score=170.28  Aligned_cols=166  Identities=17%  Similarity=0.237  Sum_probs=112.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcc--hhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYH--LCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~--~~h~   60 (182)
                      .+++.++|+|++.. .+... +...+++++|+..++++.+.+..                    ....|||+.+  ++  
T Consensus        86 ~~l~~l~hp~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~iv--  161 (309)
T 3p86_A           86 AIMKRLRHPNIVLF-MGAVT-QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV--  161 (309)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC-STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCC--
T ss_pred             HHHHhCCCCCEeeE-EEEEE-ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEE--
Confidence            36778888887644 44444 45568899999988887765421                    1134777765  55  


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                       |+|+||+||+++.++.+||+|||++......... .....|++. |+|||++.+    ..++.++|+||+|+++|+|++
T Consensus       162 -H~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ellt  234 (309)
T 3p86_A          162 -HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-SKSAAGTPE-WMAPEVLRD----EPSNEKSDVYSFGVILWELAT  234 (309)
T ss_dssp             -CTTCCGGGEEECTTCCEEECCCC------------------CCT-TSCHHHHTT----CCCCTTHHHHHHHHHHHHHHH
T ss_pred             -CCCCChhhEEEeCCCcEEECCCCCCccccccccc-cccCCCCcc-ccChhhhcC----CCCCchhhHHHHHHHHHHHHh
Confidence             4555599999999999999999999765443221 122567888 999999988    778899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHh-hCCCCCCCCCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVV-QDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |..||.+ ....+....+. ......+ +..+|+++++++++
T Consensus       235 g~~Pf~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  274 (309)
T 3p86_A          235 LQQPWGN-LNPAQVVAAVGFKCKRLEI-PRNLNPQVAAIIEG  274 (309)
T ss_dssp             CCCTTTT-SCHHHHHHHHHHSCCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCCCCCC-CCHHHHHHHHHhcCCCCCC-CccCCHHHHHHHHH
Confidence            9999988 45545554443 3344444 56789999998863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.94  E-value=2.4e-26  Score=175.85  Aligned_cols=165  Identities=16%  Similarity=0.233  Sum_probs=119.3

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..+++|.+++..                                 ..+
T Consensus       139 ~l~~l~~hpnIv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  216 (370)
T 2psq_A          139 MMKMIGKHKNII-NLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  216 (370)
T ss_dssp             HHHHSCCCTTBC-CEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCEe-eEEEEEc-cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            56677 566665 4455544 45678999999988887665432                                 113


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .|+||||+||+++.++.+||+|||++......... ......+++. |+|||++.+    ..++.++|+
T Consensus       217 ~~LH~~~i---vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Dv  288 (370)
T 2psq_A          217 EYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFD----RVYTHQSDV  288 (370)
T ss_dssp             HHHHHTTE---ECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGG-GCCHHHHHT----CCCCHHHHH
T ss_pred             HHHHhCCe---eccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccc-eECHhHhcC----CCCCcHHHH
Confidence            47777655   45556699999999999999999999755432211 1122345566 999999987    788999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||.+ ....+....+..+..+.. +..++++++++++
T Consensus       289 wslG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  339 (370)
T 2psq_A          289 WSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDK-PANCTNELYMMMR  339 (370)
T ss_dssp             HHHHHHHHHHHTTSCCSSTT-CCGGGHHHHHHTTCCCCC-CTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            999999999999 9999988 345455555566665555 5568899998875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=3.4e-26  Score=175.91  Aligned_cols=145  Identities=19%  Similarity=0.237  Sum_probs=102.5

Q ss_pred             HHHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHH------------------HHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL------------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+. |+|++..+..+...+...+++++|+... ++.+.+                  .++  .|||+.+++   |+|
T Consensus        61 ~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L--~~LH~~~iv---HrD  134 (388)
T 3oz6_A           61 ILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVI--KYLHSGGLL---HRD  134 (388)
T ss_dssp             HHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHHTCCCHHHHHHHHHHHHHHH--HHHHHTTEE---CCC
T ss_pred             HHHhccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHcCCCCHHHHHHHHHHHHHHH--HHHHhCCEE---eCC
Confidence            556676 6666544444444455678999999874 555432                  233  477777655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCch--------------------hhhhcccCCCCCCcccCccccCCCCCCCCCCc
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDL--------------------LIIRGLYGADCDPNFIRPERIDPSGNPSNYDI  124 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~--------------------~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~  124 (182)
                      |||+||+++.++.+||+|||+++.....                    .....+..+|++. |+|||++.+   ...++.
T Consensus       135 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~---~~~~~~  210 (388)
T 3oz6_A          135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW-YRAPEILLG---STKYTK  210 (388)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGG-GCCHHHHTT---CCCCCT
T ss_pred             CCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCC-cCCHHHhcC---CCCCCC
Confidence            6699999999999999999998654220                    0111233678888 999999875   146789


Q ss_pred             cchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        125 RSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       125 ~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      ++||||+||++|+|++|.+||.+ .+..+++..+.
T Consensus       211 ~~DiwSlG~il~ell~g~~pf~~-~~~~~~~~~i~  244 (388)
T 3oz6_A          211 GIDMWSLGCILGEILCGKPIFPG-SSTMNQLERII  244 (388)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHH
Confidence            99999999999999999999998 56666666654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.94  E-value=2.3e-26  Score=180.24  Aligned_cols=165  Identities=19%  Similarity=0.264  Sum_probs=123.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. ..+..  ...+++++|+...+++.+++..                   ..+.|||+.++   .|+
T Consensus       235 ~~l~~l~h~~iv~l-~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vHr  308 (454)
T 1qcf_A          235 NVMKTLQHDKLVKL-HAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHR  308 (454)
T ss_dssp             HHHTTCCCTTBCCE-EEEEC--SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred             HHHhhCCCCCEeeE-EEEEe--CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCC
Confidence            36777888887654 44443  5568899999998888775421                   11347777655   455


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||||+||+++.++.+||+|||+++..............++.. |+|||++..    ..++.++|+||||+++|+|++ |.
T Consensus       309 Dlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~~l~el~t~g~  383 (454)
T 1qcf_A          309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINF----GSFTIKSDVWSFGILLMEIVTYGR  383 (454)
T ss_dssp             SCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCccccc-ccCHHHhcc----CCCCcHHHHHhHHHHHHHHHhCCC
Confidence            566999999999999999999998765543322222334556 999999987    678999999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+...+. |..+|+++.+++.
T Consensus       384 ~P~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  419 (454)
T 1qcf_A          384 IPYPG-MSNPEVIRALERGYRMPR-PENCPEELYNIMM  419 (454)
T ss_dssp             CSSTT-CCHHHHHHHHHHTCCCCC-CTTSCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99998 455566666667765555 5678999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.94  E-value=5.1e-27  Score=184.41  Aligned_cols=144  Identities=16%  Similarity=0.206  Sum_probs=101.7

Q ss_pred             HHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHH----------------HHHHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQ----------------KELETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~----------------~~l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++..+..+...    +...+++++|+.......                +.+.++.  |||+.+++|   +
T Consensus       114 ~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~--~lH~~~iiH---r  188 (464)
T 3ttj_A          114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK--HLHSAGIIH---R  188 (464)
T ss_dssp             HHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHH--HHHHTTCCC---C
T ss_pred             HHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHH--HHHHCCccc---C
Confidence            67788888876443333221    225678999998765322                1233444  888776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||||+||+++.++.+||+|||+++.......  .+..+|++. |+|||++.+    ..++.++||||+||++|+|++|++
T Consensus       189 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlG~il~ell~g~~  261 (464)
T 3ttj_A          189 DLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMVRHKI  261 (464)
T ss_dssp             CCCGGGEEECTTSCEEECCCCCC-----CCC--C----CCCT-TCCHHHHTT----CCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CCChHhEEEeCCCCEEEEEEEeeeecCCCcc--cCCCccccc-ccCHHHHcC----CCCCHHHHHHHHHHHHHHHHhCCC
Confidence            5559999999999999999999977654322  333678888 999999998    789999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~  160 (182)
                      ||.+ .+..+++..+..
T Consensus       262 pF~g-~~~~~~~~~i~~  277 (464)
T 3ttj_A          262 LFPG-RDYIDQWNKVIE  277 (464)
T ss_dssp             SSCC-SSHHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHH
Confidence            9998 566666666654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.94  E-value=1.7e-26  Score=174.63  Aligned_cols=162  Identities=19%  Similarity=0.215  Sum_probs=114.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++|+. .+++.+.+..                 .+..|||+.+++   |+|+|
T Consensus        62 ~l~~l~hpnIv~-l~~~~~-~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv---H~Dlk  135 (336)
T 3h4j_B           62 YLKLLRHPHIIK-LYDVIT-TPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV---HRDLK  135 (336)
T ss_dssp             HHTTCCCTTBCC-EEEEEE-CSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCC---CCCCS
T ss_pred             HHHhCCCCCCCe-EEEEEE-eCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---ecCCc
Confidence            567788877764 445544 456788999998 4566554311                 113477776654   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.+||+|||++........  ....+|++. |+|||++.+    ..+ +.++|+||+||++|+|++|..||
T Consensus       136 p~NIll~~~~~~kl~DFG~s~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~~DiwslG~il~~ll~g~~Pf  208 (336)
T 3h4j_B          136 PENLLLDDNLNVKIADFGLSNIMTDGNF--LKTSCGSPN-YAAPEVING----KLYAGPEVDVWSCGIVLYVMLVGRLPF  208 (336)
T ss_dssp             TTTEEECTTCCEEECCSSCTBTTTTSBT--TCCCTTSTT-TSCGGGSCC----SGGGCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             hhhEEEcCCCCEEEEEeccceeccCCcc--cccccCCcC-cCCHHHHcC----CCCCCCccchhHHHHHHHHHHhCCCCC
Confidence            9999999999999999999977654433  233678888 999999987    555 58899999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+. ........+ ......+ |..+|+++++++++
T Consensus       209 ~~~-~~~~~~~~i-~~~~~~~-p~~~s~~~~~li~~  241 (336)
T 3h4j_B          209 DDE-FIPNLFKKV-NSCVYVM-PDFLSPGAQSLIRR  241 (336)
T ss_dssp             BCS-SSTTCBCCC-CSSCCCC-CTTSCHHHHHHHHT
T ss_pred             CCc-cHHHHHHHH-HcCCCCC-cccCCHHHHHHHHH
Confidence            873 222222222 2222344 55689999998864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.94  E-value=5.3e-26  Score=170.85  Aligned_cols=166  Identities=20%  Similarity=0.283  Sum_probs=121.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++..+... . ....+++++|+..++++.+.+..                ....|||+.++   .|+|+||
T Consensus        95 ~l~~l~h~niv~~~~~~-~-~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dlkp  169 (321)
T 2c30_A           95 IMRDYQHFNVVEMYKSY-L-VGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGV---IHRDIKS  169 (321)
T ss_dssp             HHTTCCCTTBCCEEEEE-E-ETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSG
T ss_pred             HHHhCCCCCcceEEEEE-E-ECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCH
Confidence            56778888877544433 3 34568899999988887764311                11347777655   4555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.+||+|||++......... .....|++. |+|||++..    ..++.++|+||+|+++|+|++|..||.+
T Consensus       170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g~~pf~~  243 (321)
T 2c30_A          170 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPY-WMAPEVISR----SLYATEVDIWSLGIMVIEMVDGEPPYFS  243 (321)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HHEEECCCCcEEEeeeeeeeecccCccc-cccccCCcc-ccCHhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999998765443221 223578888 999999987    7788999999999999999999999988


Q ss_pred             CCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                       ....+....+.....+.+. +..+|+++++++++
T Consensus       244 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  277 (321)
T 2c30_A          244 -DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER  277 (321)
T ss_dssp             -SCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHH
T ss_pred             -CCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHH
Confidence             4565666666666555443 23678889988753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.94  E-value=6.1e-26  Score=178.60  Aligned_cols=163  Identities=15%  Similarity=0.177  Sum_probs=121.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH---------------H--HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE---------------T--LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------------~--~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+.               .  .+..|||+.+++   |+|+|
T Consensus        69 ~l~~l~HpnIv~-l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv---HrDLk  143 (476)
T 2y94_A           69 NLKLFRHPHIIK-LYQVIS-TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV---HRDLK  143 (476)
T ss_dssp             HHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEE---CSCCS
T ss_pred             HHHhCCCCCCCc-EEEEEE-ECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC---ccccc
Confidence            567788877764 444444 4567899999998888876431               0  123477777655   55556


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.+||+|||++........  ....+|++. |+|||++.+    ..+ +.++|+||+||++|+|++|..||
T Consensus       144 p~NIll~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~~DiwSlGvil~elltG~~Pf  216 (476)
T 2y94_A          144 PENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPN-YAAPEVISG----RLYAGPEVDIWSSGVILYALLCGTLPF  216 (476)
T ss_dssp             GGGEEECTTCCEEECCCSSCEECCTTCC--BCCCCSCST-TCCHHHHTT----CCBCSHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HHHEEEecCCCeEEEeccchhhcccccc--ccccCCCcC-eEChhhccC----CCCCCCcceehhhHHHHHHHhhCCCCC
Confidence            9999999999999999999977654332  233678888 999999987    454 58899999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ........++..+. ... |..+|+++++++++
T Consensus       217 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~Li~~  249 (476)
T 2y94_A          217 DD-DHVPTLFKKICDGI-FYT-PQYLNPSVISLLKH  249 (476)
T ss_dssp             CC-SSSHHHHHHHHTTC-CCC-CTTCCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHhcCC-cCC-CccCCHHHHHHHHH
Confidence            88 45556666666654 334 45689999998864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.9e-26  Score=173.35  Aligned_cols=165  Identities=12%  Similarity=0.122  Sum_probs=121.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .+... +...+++++|++.++++.+.+..                  ....|||+.+++   |+|
T Consensus        53 ~~l~~l~hpnIv~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv---H~D  127 (321)
T 1tki_A           53 SILNIARHRNILHL-HESFE-SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG---HFD  127 (321)
T ss_dssp             HHHHHSCCTTBCCE-EEEEE-ETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHHhCCCCCCCeE-eEEEe-cCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---cCC
Confidence            36778888887654 44444 45678999999988888765310                  113477776554   555


Q ss_pred             CCCCcEEEcC--CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRL--QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~--~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.  ++.+||+|||++........  .....+++. |+|||++..    ..++.++|+||+||++|+|++|.
T Consensus       128 lkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~~ll~g~  200 (321)
T 1tki_A          128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPE-YYAPEVHQH----DVVSTATDMWSLGTLVYVLLSGI  200 (321)
T ss_dssp             CCGGGEEESSSSCCCEEECCCTTCEECCTTCE--EEEEESCGG-GSCHHHHTT----CEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCHHHEEEccCCCCCEEEEECCCCeECCCCCc--cccccCChh-hcCcHHhcC----CCCCchhhHHHHHHHHHHHHhCC
Confidence            6699999987  78999999999977644322  222567788 999999987    67789999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+..+.. .+++   ..+|+++++++++
T Consensus       201 ~pf~~-~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~  240 (321)
T 1tki_A          201 NPFLA-ETNQQIIENIMNAEY-TFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             CTTCC-SSHHHHHHHHHHTCC-CCCHHHHTTSCHHHHHHHHT
T ss_pred             CCCcC-CCHHHHHHHHHcCCC-CCChhhhccCCHHHHHHHHH
Confidence            99988 455566666666543 2322   3689999998864

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.94  E-value=1.4e-25  Score=170.34  Aligned_cols=165  Identities=21%  Similarity=0.237  Sum_probs=120.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++... ++.. +....++++|+..+ ++.+.+.                .  ....|||+.+++   |+|
T Consensus       106 ~~l~~l~hpniv~~~-~~~~-~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv---H~D  179 (348)
T 1u5q_A          106 RFLQKLRHPNTIQYR-GCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI---HRD  179 (348)
T ss_dssp             HHHHHCCCTTBCCEE-EEEE-ETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCB---CCC
T ss_pred             HHHHhCCCCCEeeEE-EEEE-ECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee---eCC
Confidence            367778888877544 3333 35678899999874 4433221                0  123477777654   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.+||+|||++.......     ...|++. |+|||++.... ...++.++|+||+||++|+|++|.+|
T Consensus       180 lkp~NIll~~~~~~kL~DfG~a~~~~~~~-----~~~gt~~-y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~g~~p  252 (348)
T 1u5q_A          180 VKAGNILLSEPGLVKLGDFGSASIMAPAN-----SFVGTPY-WMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKPP  252 (348)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCBSSSSBC-----CCCSCGG-GCCHHHHHTTS-SCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCHHHEEECCCCCEEEeeccCceecCCCC-----cccCCcc-eeCHhhhcccc-CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            66999999999999999999997654432     2678888 99999985211 15678899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ ......+..+..+..+.+++..+|+.+++++++
T Consensus       253 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  288 (348)
T 1u5q_A          253 LFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  288 (348)
T ss_dssp             TTT-SCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred             CCC-CChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            988 456666667777766666667889999998863

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=9.1e-26  Score=171.74  Aligned_cols=171  Identities=20%  Similarity=0.214  Sum_probs=115.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++++++++.+.+... +...+++++|+..++++.+.+..                 ..+.|||+.++   .|+||
T Consensus       110 ~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dl  185 (355)
T 1vzo_A          110 QVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI---IYRDI  185 (355)
T ss_dssp             HHHHHHHTCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCC
T ss_pred             HHHHHccCCCceeEEEEEEe-eCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCC
Confidence            35677754455555555554 45678899999998888765421                 11347777654   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++..............+|++. |+|||++.+..  ..++.++|+||+||++|+|++|..||
T Consensus       186 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~--~~~~~~~DvwslG~il~ell~g~~pf  262 (355)
T 1vzo_A          186 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE-YMAPDIVRGGD--SGHDKAVDWWSLGVLMYELLTGASPF  262 (355)
T ss_dssp             CGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCT-TCCHHHHTTCC-----CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcC-ccChhhhcCCC--CCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            6999999999999999999987654433322333678888 99999987511  34678999999999999999999999


Q ss_pred             CCCC--CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWG--SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~--~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ....  .....+........+++ +..+++.+++++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  299 (355)
T 1vzo_A          263 TVDGEKNSQAEISRRILKSEPPY-PQEMSALAKDLIQR  299 (355)
T ss_dssp             SCTTSCCCHHHHHHHHHHCCCCC-CTTSCHHHHHHHHH
T ss_pred             ccCCccchHHHHHHHHhccCCCC-CcccCHHHHHHHHH
Confidence            7521  22222332222333455 45688999988753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=1.7e-25  Score=169.85  Aligned_cols=167  Identities=14%  Similarity=0.153  Sum_probs=111.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH---------------H--HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE---------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..++++.+.+.               .  ....|||+.+++|   +|+
T Consensus       100 ~~l~~l~h~niv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH---~Di  174 (349)
T 2w4o_A          100 GVLLRLSHPNIIKL-KEIFE-TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVH---RDL  174 (349)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-CSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCC---CCC
T ss_pred             HHHHhCCCCCCcce-eeeEe-cCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---cCC
Confidence            36778888887644 44444 4567889999998888766431               0  1234777776554   555


Q ss_pred             CCCcEEEcC---CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQRL---QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~~---~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||+++.   ++.+||+|||++........  .....|++. |+|||++.+    ..++.++|+||+||++|+|++|.
T Consensus       175 kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~  247 (349)
T 2w4o_A          175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVL--MKTVCGTPG-YCAPEILRG----CAYGPEVDMWSVGIITYILLCGF  247 (349)
T ss_dssp             CGGGEEESSSSTTCCEEECCCC------------------CGG-GSCHHHHTT----CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcccEEEecCCCCCCEEEccCccccccCcccc--cccccCCCC-ccCHHHhcC----CCCCcccchHHHHHHHHHHHhCC
Confidence            699999975   78999999999876544322  223567888 999999987    77899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .||.+..........+..+.....+  ...+|+++++++++
T Consensus       248 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  288 (349)
T 2w4o_A          248 EPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRK  288 (349)
T ss_dssp             CTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHT
T ss_pred             CCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHH
Confidence            9998744443345555554332221  23688999998864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.1e-25  Score=169.37  Aligned_cols=165  Identities=17%  Similarity=0.178  Sum_probs=120.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        66 ~~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv---H~Dl  140 (326)
T 2y0a_A           66 SILKEIQHPNVIT-LHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA---HFDL  140 (326)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhCCCCCCCc-EEEEEE-eCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeE---cCCC
Confidence            3677888888764 444444 45678899999988888775410                 123477776554   5556


Q ss_pred             CCCcEEEcCCC----eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         66 SVDTFHQRLQF----LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        66 k~~nil~~~~~----~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ||+||+++.++    .+||+|||++........  .....|++. |+|||++..    ..++.++|+||+||++|+|++|
T Consensus       141 kp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~~ll~g  213 (326)
T 2y0a_A          141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPE-FVAPEIVNY----EPLGLEADMWSIGVITYILLSG  213 (326)
T ss_dssp             CGGGEEESCSSSSSCCEEECCCTTCEECCTTSC--CCCCCSCTT-TCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CHHHEEEecCCCCCCCEEEEECCCCeECCCCCc--cccccCCcC-cCCceeecC----CCCCcHHHHHHHHHHHHHHHHC
Confidence            69999998887    799999999976543322  233578888 999999987    7889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      ..||.+ ....+.+..+.... ..++   +..+|+++++++++
T Consensus       214 ~~pf~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~  254 (326)
T 2y0a_A          214 ASPFLG-DTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRR  254 (326)
T ss_dssp             CCSSCC-SSHHHHHHHHHHTC-CCCCHHHHTTSCHHHHHHHHH
T ss_pred             cCCCCC-CCHHHHHHHHHhcC-CCcCccccccCCHHHHHHHHH
Confidence            999988 45555555555443 2232   23678899998863

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.94  E-value=7.5e-26  Score=171.98  Aligned_cols=166  Identities=16%  Similarity=0.184  Sum_probs=118.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++..+ +... +...++++||++.++++.+.+..                     ....|||+.++   .
T Consensus        78 ~~l~~l~hpnIv~~~-~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---v  152 (351)
T 3c0i_A           78 SICHMLKHPHIVELL-ETYS-SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI---I  152 (351)
T ss_dssp             HHHHHCCCTTBCCEE-EEEE-ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE---E
T ss_pred             HHHHhCCCCCCCcEE-EEEE-eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---e
Confidence            367788888876544 4444 45678999999988877543211                     01246776654   4


Q ss_pred             ccCCCCCcEEEcCCCe---EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         62 TRYFSVDTFHQRLQFL---LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~---~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      |+||||+||+++.++.   +||+|||++......... ....+|++. |+|||++..    ..++.++|+||+||++|+|
T Consensus       153 HrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~~l  226 (351)
T 3c0i_A          153 HRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV-AGGRVGTPH-FMAPEVVKR----EPYGKPVDVWGCGVILFIL  226 (351)
T ss_dssp             CSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCB-CCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred             eccCChHHeEEecCCCCCcEEEecCcceeEecCCCee-ecCCcCCcC-ccCHHHHcC----CCCCchHhhHHHHHHHHHH
Confidence            5556699999987654   999999999776543221 223578888 999999987    7789999999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      ++|..||.+  ........+..+.....+  ...+|++++++|++
T Consensus       227 l~g~~pf~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  269 (351)
T 3c0i_A          227 LSGCLPFYG--TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR  269 (351)
T ss_dssp             HHSSCSSCS--SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             HHCCCCCCC--cHHHHHHHHHcCCCCCCccccccCCHHHHHHHHH
Confidence            999999987  344555555555432221  13688999998864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.93  E-value=1.3e-25  Score=164.55  Aligned_cols=167  Identities=19%  Similarity=0.253  Sum_probs=114.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------HHHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------TLRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|+|++. +.+... +...+++++|+..++++.+.+.                .....|||+.+..++.|+|+|
T Consensus        58 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dik  135 (271)
T 3dtc_A           58 KLFAMLKHPNIIA-LRGVCL-KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLK  135 (271)
T ss_dssp             HHHHHCCCTTBCC-EEEEEC-CC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCS
T ss_pred             HHHHhcCCCCEee-EEEEEe-cCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCc
Confidence            3567788877764 444444 4566889999998888766431                012348888886657777888


Q ss_pred             CCcEEEcC--------CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         67 VDTFHQRL--------QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        67 ~~nil~~~--------~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                      |+||+++.        ++.+||+|||.+........  . ...+++. |+|||.+.+    ..++.++|+||+|+++|+|
T Consensus       136 p~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~-~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~l  207 (271)
T 3dtc_A          136 SSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--M-SAAGAYA-WMAPEVIRA----SMFSKGSDVWSYGVLLWEL  207 (271)
T ss_dssp             GGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGG-GSCHHHHHH----CCCSHHHHHHHHHHHHHHH
T ss_pred             hHHEEEecccccccccCcceEEccCCcccccccccc--c-CCCCccc-eeCHHHhcc----CCCCchhhHHHHHHHHHHH
Confidence            99999986        67899999999976554332  2 2567777 999999987    6788999999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCC-CCCCCCCCCCHHHHHHhhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDD-PPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~s~~~~~~i~~  181 (182)
                      ++|..||.+ .........+..+. .+++ +..+|+++++++++
T Consensus       208 ~~g~~p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  249 (271)
T 3dtc_A          208 LTGEVPFRG-IDGLAVAYGVAMNKLALPI-PSTCPEPFAKLMED  249 (271)
T ss_dssp             HHCCCTTTT-SCHHHHHHHHHTSCCCCCC-CTTCCHHHHHHHHH
T ss_pred             HhCCCCCCC-CCHHHHHHhhhcCCCCCCC-CcccCHHHHHHHHH
Confidence            999999988 34444444444433 3333 56789999998753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.93  E-value=4.9e-26  Score=167.78  Aligned_cols=165  Identities=16%  Similarity=0.232  Sum_probs=109.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++..+ ++.  .+..+++++|+..++++.+.+..                  ....|||+.++   .|+|+
T Consensus        69 ~l~~l~h~~iv~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl  142 (281)
T 1mp8_A           69 TMRQFDHPHIVKLI-GVI--TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---VHRDI  142 (281)
T ss_dssp             HHHTCCCTTBCCEE-EEE--CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCC
T ss_pred             HHHhCCCCccceEE-EEE--ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecccc
Confidence            56677888776443 443  34567899999988887765421                  11347777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      ||+||+++.++.+||+|||++...............+++. |+|||++..    ..++.++|+||+|+++|+|++ |..|
T Consensus       143 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          143 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF----RRFTSASDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             SGGGEEEEETTEEEECC-------------------CCGG-GCCHHHHHH----CCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cHHHEEECCCCCEEECccccccccCcccccccccCCCccc-ccChhhccc----CCCCCccCchHHHHHHHHHHhcCCCC
Confidence            6999999999999999999997765433211222345556 999999987    678899999999999999996 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ ....+....+..+..+++ +..+|+++++++++
T Consensus       218 f~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~  252 (281)
T 1mp8_A          218 FQG-VKNNDVIGRIENGERLPM-PPNCPPTLYSLMTK  252 (281)
T ss_dssp             TTT-CCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCc-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHH
Confidence            988 345466666666665555 45689999988763

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.93  E-value=9.9e-26  Score=172.64  Aligned_cols=166  Identities=14%  Similarity=0.143  Sum_probs=119.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..++++.+.+..                  ..+.|||+.++   .|+|
T Consensus       138 ~~l~~l~hpnIv~~-~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~D  212 (373)
T 2x4f_A          138 SVMNQLDHANLIQL-YDAFE-SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI---LHLD  212 (373)
T ss_dssp             HHHTTCCCTTBCCE-EEEEE-CSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHHhCCCCCCCeE-EEEEE-ECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---cccc
Confidence            36677888887644 44444 45678899999888776553310                  11347777665   4555


Q ss_pred             CCCCcEEE--cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQ--RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~--~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||++  +.++.+||+|||++........  ....+|++. |+|||++..    ..++.++|+||+||++|+|++|.
T Consensus       213 lkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~elltg~  285 (373)
T 2x4f_A          213 LKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPE-FLAPEVVNY----DFVSFPTDMWSVGVIAYMLLSGL  285 (373)
T ss_dssp             CCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCCCCSSCT-TCCHHHHTT----CBCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCHHHEEEecCCCCcEEEEeCCCceecCCccc--cccccCCCc-EeChhhccC----CCCCcHHhHHHHHHHHHHHHhCC
Confidence            66999999  5668999999999977654332  233568888 999999987    67889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+.+..+........+  ...+|+++++||++
T Consensus       286 ~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  325 (373)
T 2x4f_A          286 SPFLG-DNDAETLNNILACRWDLEDEEFQDISEEAKEFISK  325 (373)
T ss_dssp             CTTCC-SSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHT
T ss_pred             CCCCC-CCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHH
Confidence            99998 4566666776665422111  23689999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=1e-25  Score=176.49  Aligned_cols=163  Identities=17%  Similarity=0.242  Sum_probs=120.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++..+ ++...+...+++++|+..++++.+++..                   ....|||+.++   .|+
T Consensus       238 ~~l~~l~h~niv~~~-~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vHr  313 (450)
T 1k9a_A          238 SVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHR  313 (450)
T ss_dssp             HHHHTCCCTTBCCEE-EEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECS
T ss_pred             HHHHhccCCCEEEEE-EEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCC
Confidence            367788888876444 4444355578999999988887775421                   12347777655   455


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+||+|||+++.......   . ..++.. |+|||++..    ..++.++|+||+|+++|+|++ |.
T Consensus       314 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~---~-~~~~~~-y~aPE~~~~----~~~~~~sDvwslG~~l~el~t~g~  384 (450)
T 1k9a_A          314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQD---T-GKLPVK-WTAPEALRE----KKFSTKSDVWSFGILLWEIYSFGR  384 (450)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEECC----------CCCTT-TSCHHHHHS----SCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCHhhEEECCCCCEEEeeCCCccccccccc---C-CCCCcc-eeCHHHhcC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence            5669999999999999999999875433221   1 345566 999999987    788999999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+. ...+....+..+..++. |..+|+++.++++
T Consensus       385 ~P~~~~-~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~  420 (450)
T 1k9a_A          385 VPYPRI-PLKDVVPRVEKGYKMDA-PDGCPPAVYDVMK  420 (450)
T ss_dssp             CSSTTS-CTTTHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCCC-CHHHHHHHHHcCCCCCC-CCcCCHHHHHHHH
Confidence            999884 44456666667766655 5678999999875

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=1.2e-25  Score=172.99  Aligned_cols=166  Identities=16%  Similarity=0.175  Sum_probs=119.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +.+... +...+++++|+..++++.+.+.                .  .++.|||+.+++   |+|
T Consensus       100 ~il~~l~hpnIv~-~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv---HrD  174 (387)
T 1kob_A          100 SIMNQLHHPKLIN-LHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV---HLD  174 (387)
T ss_dssp             HHHTTCCSTTBCC-EEEEEE-CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHHhCCCcCCCe-EEEEEE-eCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCee---ecc
Confidence            3667788877764 444444 4667889999998888766431                0  123477776654   555


Q ss_pred             CCCCcEEEcC--CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRL--QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~--~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |||+||+++.  ++.+||+|||++........  .....+++. |+|||++..    ..++.++|+||+||++|+|++|.
T Consensus       175 lkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~  247 (387)
T 1kob_A          175 IKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAE-FAAPEIVDR----EPVGFYTDMWAIGVLGYVLLSGL  247 (387)
T ss_dssp             CCGGGEEESSTTCCCEEECCCTTCEECCTTSC--EEEECSSGG-GCCHHHHTT----CCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             cchHHeEEecCCCCceEEEecccceecCCCcc--eeeeccCCC-ccCchhccC----CCCCCcccEeeHhHHHHHHHhCC
Confidence            6699999974  47799999999976544322  222567888 999999987    77889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+.+..+..+.....+  ...+|++++++|++
T Consensus       248 ~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  287 (387)
T 1kob_A          248 SPFAG-EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN  287 (387)
T ss_dssp             CSSCC-SSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHT
T ss_pred             CCCCC-CCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHH
Confidence            99988 4555666666554322111  24689999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.93  E-value=5.6e-26  Score=172.67  Aligned_cols=122  Identities=19%  Similarity=0.222  Sum_probs=91.2

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++|   +|+||+||+++.++.+||+|||++........ .......++.. |+|||++.+    ..++.++||
T Consensus       207 ~~LH~~~ivH---~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Di  278 (359)
T 3vhe_A          207 EFLASRKCIH---RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WMAPETIFD----RVYTIQSDV  278 (359)
T ss_dssp             HHHHHTTCCC---SCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG-GCCHHHHHH----CCCCHHHHH
T ss_pred             HHHHHCCccc---CCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce-eEChhhhcC----CCCCchhhh
Confidence            4777776555   55559999999999999999999976543221 11222455667 999999987    788999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+|+++|+|++ |..||.+..........+..+..+.. +..+++++.+++.
T Consensus       279 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  330 (359)
T 3vhe_A          279 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTML  330 (359)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             hhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            999999999998 99999885445444455555555555 5668899998875

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.93  E-value=2.6e-25  Score=171.75  Aligned_cols=165  Identities=16%  Similarity=0.200  Sum_probs=108.3

Q ss_pred             HHhCCCCcEEEEEEee--ecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          6 AVFNQDEIGVTVSSVK--TTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +..+|+|++..+..+.  ..+...++++||++.++++.+.+..                   ..+.|||+.+++   |+|
T Consensus       110 ~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv---HrD  186 (400)
T 1nxk_A          110 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA---HRD  186 (400)
T ss_dssp             HHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc---ccC
Confidence            4456666654333222  2245668899999998888765421                   123477776554   555


Q ss_pred             CCCCcEEEcC---CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRL---QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~---~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |||+||+++.   ++.+||+|||+++.......  ....+|++. |+|||++..    ..++.++||||+||++|+|++|
T Consensus       187 lkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g  259 (400)
T 1nxk_A          187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPY-YVAPEVLGP----EKYDKSCDMWSLGVIMYILLCG  259 (400)
T ss_dssp             CCGGGEEESSSSTTCCEEECCCTTCEECC-------------CT-TCCGGGSCC----CCSSSHHHHHHHHHHHHHHHHS
T ss_pred             cCcceEEEecCCCCccEEEEecccccccCCCCc--cccCCCCCC-ccCHhhcCC----CCCCCcccHHHHHHHHHHHHhC
Confidence            6699999997   78899999999976554332  233678888 999999987    7889999999999999999999


Q ss_pred             CCCCCCCCCc---HHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSP---FEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~---~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      ..||.+....   ......+..+. ..++   ...+|+++++||++
T Consensus       260 ~~pf~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~s~~~~~li~~  304 (400)
T 1nxk_A          260 YPPFYSNHGLAISPGMKTRIRMGQ-YEFPNPEWSEVSEEVKMLIRN  304 (400)
T ss_dssp             SCSCCCCTTCSSCCSHHHHHHHTC-CCCCTTTTTTSCHHHHHHHHT
T ss_pred             CCCCCCCccccccHHHHHHHHcCc-ccCCCcccccCCHHHHHHHHH
Confidence            9999763211   11233333332 2222   24689999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=9e-26  Score=176.84  Aligned_cols=165  Identities=21%  Similarity=0.247  Sum_probs=117.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++..+ ++..  ...+++++|+..++++.+++..                   ..+.|||+.+++   |+
T Consensus       231 ~~l~~l~hp~iv~~~-~~~~--~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv---Hr  304 (452)
T 1fmk_A          231 QVMKKLRHEKLVQLY-AVVS--EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV---HR  304 (452)
T ss_dssp             HHHHHCCCTTBCCEE-EEEC--SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC---CS
T ss_pred             HHHHhCCCCCEeeEE-EEEc--CCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee---CC
Confidence            467888898877544 4443  3668899999998888776521                   113477776554   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+||+|||+++..............++.. |+|||++..    ..++.++|+||+|+++|+|++ |.
T Consensus       305 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDvwslG~~l~el~t~g~  379 (452)
T 1fmk_A          305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALY----GRFTIKSDVWSFGILLTELTTKGR  379 (452)
T ss_dssp             CCSGGGEEECGGGCEEECCCCTTC--------------CCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCChhhEEECCCCCEEECCCccceecCCCceecccCCccccc-ccCHhHHhc----CCCCccccHHhHHHHHHHHHhCCC
Confidence            566999999999999999999997765432211121334556 999999987    788999999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. |..+|+.+++++.
T Consensus       380 ~P~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  415 (452)
T 1fmk_A          380 VPYPG-MVNREVLDQVERGYRMPC-PPECPESLHDLMC  415 (452)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99998 455566666777766655 4568999998875

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=2.1e-25  Score=163.42  Aligned_cols=166  Identities=17%  Similarity=0.192  Sum_probs=122.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++ .+.++.. +...+++++|+..++++.+.+..                  ....+||+.+++   |+|
T Consensus        57 ~~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~---H~d  131 (269)
T 4hcu_A           57 EVMMKLSHPKLV-QLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI---HRD  131 (269)
T ss_dssp             HHHHTCCCTTBC-CEEEEEC-SSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC---CSC
T ss_pred             HHHHhCCCCCEe-eEEEEEe-cCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCee---cCC
Confidence            367778887776 4444444 45668899999988887765411                  113477776655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||++...............++.. |+|||.+..    ..++.++|+||+|+++|+|++ |..
T Consensus       132 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~ll~~g~~  206 (269)
T 4hcu_A          132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-WASPEVFSF----SRYSSKSDVWSFGVLMWEVFSEGKI  206 (269)
T ss_dssp             CCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cchheEEEcCCCCEEeccccccccccccccccccCcccccc-cCCHHHhcC----CCCCchhhhHHHHHHHHHHhcCCCC
Confidence            66999999999999999999997765544322333445566 999999987    678899999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ ....+....+..+..+.. +...|++++++++
T Consensus       207 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  241 (269)
T 4hcu_A          207 PYEN-RSNSEVVEDISTGFRLYK-PRLASTHVYQIMN  241 (269)
T ss_dssp             TTTT-CCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHhcCccCCC-CCcCCHHHHHHHH
Confidence            9988 456566666666654444 5668899988875

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.93  E-value=2.2e-25  Score=171.83  Aligned_cols=145  Identities=19%  Similarity=0.209  Sum_probs=103.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHH----------------------HHHHHHHHHHHhhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQ----------------------KELETLRCIYIQDYH   56 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~----------------------~~l~~~~~~~l~~~~   56 (182)
                      .+++.++|+|++.....+...    +...+++++|+.....+.                      +.+.++  .|||+.+
T Consensus        84 ~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL--~~LH~~~  161 (394)
T 4e7w_A           84 QIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL--AYIHSIG  161 (394)
T ss_dssp             HHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH--HHHHHTT
T ss_pred             HHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH--HHHHHCC
Confidence            477888998887554433322    233367899998765321                      122333  3888776


Q ss_pred             hhcccccCCCCCcEEEc-CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQR-LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~-~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      ++|+   |+||+||+++ .++.+||+|||+++.......  .....+++. |+|||++.+   ...++.++|+||+||++
T Consensus       162 ivHr---Dlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwSlG~il  232 (394)
T 4e7w_A          162 ICHR---DIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSYICSRY-YRAPELIFG---ATNYTTNIDIWSTGCVM  232 (394)
T ss_dssp             EECS---CCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSSCSCGG-GCCHHHHTT---CSSCCTHHHHHHHHHHH
T ss_pred             ccCC---CCCHHHEEEcCCCCcEEEeeCCCcccccCCCC--CcccccCcC-ccCHHHHcC---CCCCCcHHHHHHHHHHH
Confidence            5555   5559999999 789999999999976544332  233677888 999999875   13588999999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      |+|++|++||.+ ....+.+..+.
T Consensus       233 ~ell~g~~pf~~-~~~~~~l~~i~  255 (394)
T 4e7w_A          233 AELMQGQPLFPG-ESGIDQLVEII  255 (394)
T ss_dssp             HHHHHSSCSSCC-SSHHHHHHHHH
T ss_pred             HHHHhCCCCCCC-CCHHHHHHHHH
Confidence            999999999998 45555555544

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.93  E-value=3.4e-25  Score=174.96  Aligned_cols=165  Identities=20%  Similarity=0.250  Sum_probs=119.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .++.. +...++++++++.++++.+.+..                 .+..|||+.+++|   +||
T Consensus        73 ~~l~~l~hpniv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH---~Dl  147 (486)
T 3mwu_A           73 ELLKKLDHPNIMKL-FEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH---RDL  147 (486)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC---SCC
T ss_pred             HHHHhCCCCCcCeE-EEEEE-cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe---ccC
Confidence            36778888887644 44444 46678999999998888664311                 1234777776555   555


Q ss_pred             CCCcEEEc---CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQR---LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~---~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||+++   .++.+||+|||++........  ....+|++. |+|||++.+     .++.++||||+||++|+|++|.
T Consensus       148 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~-----~~~~~~DiwslG~il~~ll~g~  219 (486)
T 3mwu_A          148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAY-YIAPEVLRG-----TYDEKCDVWSAGVILYILLSGT  219 (486)
T ss_dssp             SGGGEEESSSSTTCCEEECSCSCTTTBCCC------CCTTGGG-GCCGGGGGS-----CCCHHHHHHHHHHHHHHHHHSS
T ss_pred             chHHEEEecCCCCCCEEEEECCcCeECCCCCc--cCCCcCCCC-CCCHHHhCC-----CCCchhhHHHHHHHHHHHHhCC
Confidence            59999995   456799999999976654433  233678888 999999875     5889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCC-CCC-CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPP-RLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~-~~~-~~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+.+..+..+..+ +.| ...+|++++++|++
T Consensus       220 ~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  259 (486)
T 3mwu_A          220 PPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (486)
T ss_dssp             CSSCC-SSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHH
Confidence            99998 4666666666665432 222 23689999998864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=6e-25  Score=164.99  Aligned_cols=172  Identities=22%  Similarity=0.297  Sum_probs=113.8

Q ss_pred             HHHHh-CCCCcEEEEEEeeecC----CCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhc
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h   59 (182)
                      +++.+ +|+|++..+..+....    ...+++++|+...+++.+.+..                   ..+.|||+.+++ 
T Consensus        73 ~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv-  151 (326)
T 2x7f_A           73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI-  151 (326)
T ss_dssp             HHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCcc-
Confidence            55666 5666654433333321    5678899999988777665421                   113477776554 


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l~~l  138 (182)
                        |+|+||+||+++.++.+||+|||++......... .....++.. |+|||++..... ...++.++|+||+||++|+|
T Consensus       152 --H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l  227 (326)
T 2x7f_A          152 --HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPY-WMAPEVIACDENPDATYDFKSDLWSLGITAIEM  227 (326)
T ss_dssp             --CCCCSGGGEEECTTCCEEECCCTTTC--------------CCGG-GCCHHHHC--------CCTTHHHHHHHHHHHHH
T ss_pred             --ccCCcHHHEEEcCCCCEEEeeCcCceecCcCccc-cccccCCcc-ccChhhhccccccCcCCCccchHHHHHHHHHHH
Confidence              5556699999999999999999998765443221 122567788 999999873110 15678899999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ++|..||.+ .........+..+..+.+.+..+|+.+++++++
T Consensus       228 ~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  269 (326)
T 2x7f_A          228 AEGAPPLCD-MHPMRALFLIPRNPAPRLKSKKWSKKFQSFIES  269 (326)
T ss_dssp             HHSSCTTTT-SCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHH
T ss_pred             HhCCCCCCC-CcHHHHHHHhhcCccccCCccccCHHHHHHHHH
Confidence            999999987 455566666666665656566789999998864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.93  E-value=2.2e-25  Score=173.18  Aligned_cols=145  Identities=20%  Similarity=0.207  Sum_probs=101.3

Q ss_pred             hHHHHhCCCCcEEEEEEeee----cCCCceEEEeccCccchH----------------------HHHHHHHHHHHHhhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT----TDDKKVVLVTGKGEAEKV----------------------QKELETLRCIYIQDYH   56 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l----------------------~~~l~~~~~~~l~~~~   56 (182)
                      .+++.++|+|++.....+..    .+...+++++|+......                      .+.+.++  .|||+.+
T Consensus        99 ~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL--~~LH~~~  176 (420)
T 1j1b_A           99 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL--AYIHSFG  176 (420)
T ss_dssp             HHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--HHHHTTT
T ss_pred             HHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH--HHHHHCC
Confidence            47788899888755433322    122345689998765321                      1122333  3888776


Q ss_pred             hhcccccCCCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      ++|   +||||+||+++.+ +.+||+|||+++.......  ....++++. |+|||++.+   ...++.++||||+||++
T Consensus       177 ivH---rDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwSlG~il  247 (420)
T 1j1b_A          177 ICH---RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRY-YRAPELIFG---ATDYTSSIDVWSAGCVL  247 (420)
T ss_dssp             EEC---SCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCTT-SCCHHHHTT---CSSCCTHHHHHHHHHHH
T ss_pred             ccc---cCCChhhEEEeCCCCeEEeccchhhhhcccCCC--ceeeeeCCC-cCCHHHHcC---CCCCCchhhhHHHHHHH
Confidence            555   5555999999965 6789999999976544332  233677888 999999875   13688999999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      |+|++|++||.+ ....+.+..++
T Consensus       248 ~ell~G~~pf~~-~~~~~~l~~i~  270 (420)
T 1j1b_A          248 AELLLGQPIFPG-DSGVDQLVEII  270 (420)
T ss_dssp             HHHHHSSCSSCC-SSHHHHHHHHH
T ss_pred             HHHHhCCCCCCC-CCHHHHHHHHH
Confidence            999999999998 45555555544

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.93  E-value=2e-25  Score=167.98  Aligned_cols=166  Identities=17%  Similarity=0.236  Sum_probs=100.0

Q ss_pred             HHHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+. |+|+ +.+.++.. +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        58 ~l~~l~~h~ni-v~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv---H~Dl  132 (325)
T 3kn6_A           58 ALKLCEGHPNI-VKLHEVFH-DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVV---HRDL  132 (325)
T ss_dssp             HHHHTTTCTTB-CCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhcCCCCe-eEEEEEEE-cCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe---ecCC
Confidence            556666 5555 45555555 56678899999998888775421                 123477776655   5556


Q ss_pred             CCCcEEEcCCC---eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQRLQF---LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~~~~---~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||+++.++   .+||+|||++......... ....++++. |+|||++..    ..++.++|+||+||++|+|++|.
T Consensus       133 kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~-y~aPE~~~~----~~~~~~~DiwslG~il~~ll~g~  206 (325)
T 3kn6_A          133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCFTLH-YAAPELLNQ----NGYDESCDLWSLGVILYTMLSGQ  206 (325)
T ss_dssp             CGGGEEEEC----CEEEECCCTTCEECCC----------------------------CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEEecCCCcccEEEeccccceecCCCCCc-ccccCCCcC-ccCHHHhcC----CCCCCccchHHHHHHHHHHHhCC
Confidence            69999998765   8999999999765443322 222567788 999999987    78899999999999999999999


Q ss_pred             CCCCCCC------CcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        143 FPYDTWG------SPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~------~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      .||.+..      ...+....+..+. ..+++   ..+|+++++++++
T Consensus       207 ~pf~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~s~~~~~li~~  253 (325)
T 3kn6_A          207 VPFQSHDRSLTCTSAVEIMKKIKKGD-FSFEGEAWKNVSQEAKDLIQG  253 (325)
T ss_dssp             CTTC-------CCCHHHHHHHHTTTC-CCCCSHHHHTSCHHHHHHHHH
T ss_pred             CCCCCCccccccccHHHHHHHHHcCC-CCCCcccccCCCHHHHHHHHH
Confidence            9997621      2234455555554 33332   2589999998864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.93  E-value=2.1e-25  Score=178.09  Aligned_cols=165  Identities=21%  Similarity=0.247  Sum_probs=122.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++..+ ++..  ...+++++|+..+++|.+++..                   ..+.|||+.+++   |+
T Consensus       314 ~~l~~l~hpniv~~~-~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv---Hr  387 (535)
T 2h8h_A          314 QVMKKLRHEKLVQLY-AVVS--EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV---HR  387 (535)
T ss_dssp             HHHHHCCCTTBCCEE-EEEC--SSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC---CS
T ss_pred             HHHHhCCCCCEeeEE-EEEe--eccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee---CC
Confidence            467888888877544 4443  3668999999998888776521                   013477776554   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||||+||+++.++.+||+|||++...............++.. |+|||++..    ..++.++|||||||++|+|++ |.
T Consensus       388 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDvwSlGv~l~el~t~g~  462 (535)
T 2h8h_A          388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALY----GRFTIKSDVWSFGILLTELTTKGR  462 (535)
T ss_dssp             CCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred             CCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCccc-ccCHHHhcc----CCCCchhhHHHHHHHHHHHHhCCC
Confidence            566999999999999999999998766543322222344556 999999987    788999999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+...+. +..++++++++|.
T Consensus       463 ~P~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  498 (535)
T 2h8h_A          463 VPYPG-MVNREVLDQVERGYRMPC-PPECPESLHDLMC  498 (535)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99998 455566666667765555 4568999998875

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=1e-25  Score=165.65  Aligned_cols=171  Identities=16%  Similarity=0.157  Sum_probs=122.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcc--hhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYH--LCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~--~~h   59 (182)
                      .+++.++|+|++..+..+...+...+++++|+..++++.+.+...                     ...|||+.+  ...
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~  136 (279)
T 2w5a_A           57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT  136 (279)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCe
Confidence            367778888887655444444667789999999888877754321                     124666655  011


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      +.|+|+||+||+++.++.+||+|||.+............ ..++.. |+|||++..    ..++.++|+||+|+++|+|+
T Consensus       137 ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~  210 (279)
T 2w5a_A          137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPY-YMSPEQMNR----MSYNEKSDIWSLGCLLYELC  210 (279)
T ss_dssp             -CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHH-HHSCCT-TCCHHHHHC----C-CCHHHHHHHHHHHHHHHH
T ss_pred             eEEeccchhhEEEcCCCCEEEecCchheeeccccccccc-cCCCcc-ccChHHhcc----CCCCchhhHHHHHHHHHHHH
Confidence            556666699999999999999999988665433211112 456777 999999987    67889999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|..||.+ ....+....+..+..+.+ +..+|+++++++++
T Consensus       211 ~g~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~  250 (279)
T 2w5a_A          211 ALMPPFTA-FSQKELAGKIREGKFRRI-PYRYSDELNEIITR  250 (279)
T ss_dssp             HSSCSSCC-SSHHHHHHHHHHTCCCCC-CTTSCHHHHHHHHH
T ss_pred             HCCCCCcc-cCHHHHHHHHhhcccccC-CcccCHHHHHHHHH
Confidence            99999988 455556666666766666 55689999998763

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=5.9e-25  Score=168.76  Aligned_cols=165  Identities=16%  Similarity=0.233  Sum_probs=119.4

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..+++|.+.+..                                 .++
T Consensus       127 ~l~~l~~hpnIv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  204 (382)
T 3tt0_A          127 MMKMIGKHKNII-NLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM  204 (382)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCchhh-hheeeec-cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            56677 666665 4555554 45668899999988777665432                                 123


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.+++   |+||||+||+++.++.+||+|||++......... ......++.. |+|||++.+    ..++.++||
T Consensus       205 ~~LH~~~iv---H~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Di  276 (382)
T 3tt0_A          205 EYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD----RIYTHQSDV  276 (382)
T ss_dssp             HHHHHTTCC---CSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGG-GSCHHHHHS----CCCCHHHHH
T ss_pred             HHHHhCCEe---cCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcc-eeCHHHhcC----CCCCchhHH
Confidence            477777655   5556699999999999999999999765443211 1122345556 999999988    788999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+||++|+|++ |..||.+ ....+....+..+..+.. +..++++++++++
T Consensus       277 wslG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  327 (382)
T 3tt0_A          277 WSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDK-PSNCTNELYMMMR  327 (382)
T ss_dssp             HHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHHTTCCCCC-CSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            999999999999 9999988 455555555556655555 5678999998875

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.93  E-value=1.3e-25  Score=170.17  Aligned_cols=166  Identities=20%  Similarity=0.256  Sum_probs=116.2

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++..+ +|+|++ .+.++.. +...++++||++.++++.+.+..                 .+..|||+.++   .|+|+
T Consensus        68 ~l~~~~~hp~iv-~~~~~~~-~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~gi---vHrDl  142 (342)
T 2qr7_A           68 ILLRYGQHPNII-TLKDVYD-DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV---VHRDL  142 (342)
T ss_dssp             HHHHHTTSTTBC-CEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHHhcCCCCcC-eEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---EeccC
Confidence            45555 565554 5556555 56778999999998887764310                 12347777655   45556


Q ss_pred             CCCcEEEcCC----CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         66 SVDTFHQRLQ----FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        66 k~~nil~~~~----~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ||+||++..+    +.+||+|||++......... ....++++. |+|||++..    ..++.++|+||+||++|+|++|
T Consensus       143 kp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~ell~g  216 (342)
T 2qr7_A          143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LMTPCYTAN-FVAPEVLER----QGYDAACDIWSLGVLLYTMLTG  216 (342)
T ss_dssp             CGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC-BCCSSCCSS-CCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc-eeccCCCcc-ccCHHHhcC----CCCCCccCeeeHhHHHHHHhcC
Confidence            6999998543    35999999999765443221 223678888 999999987    6788999999999999999999


Q ss_pred             CCCCCCC--CCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTW--GSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~--~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      ..||.+.  ....+....+..+.. .++   +..+|++++++|++
T Consensus       217 ~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~  260 (342)
T 2qr7_A          217 YTPFANGPDDTPEEILARIGSGKF-SLSGGYWNSVSDTAKDLVSK  260 (342)
T ss_dssp             SCSSCSSTTSCHHHHHHHHHHCCC-CCCSTTTTTSCHHHHHHHHH
T ss_pred             CCCCCCCCcCCHHHHHHHHccCCc-ccCccccccCCHHHHHHHHH
Confidence            9999762  234445555555542 232   24689999998864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.93  E-value=3.2e-25  Score=175.41  Aligned_cols=165  Identities=20%  Similarity=0.281  Sum_probs=119.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. +...+++++|++.++++.+.+..                 ....|||+.++   .|+|+
T Consensus        88 ~~l~~l~hpniv~-~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dl  162 (494)
T 3lij_A           88 AVLKLLDHPNIMK-LYDFFE-DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI---VHRDL  162 (494)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHHhCCCCCCCe-EEEEEE-eCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccC
Confidence            3677788887764 444444 56678999999998887664311                 12347777765   45556


Q ss_pred             CCCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||+++..   +.+||+|||++........  ....+|++. |+|||++..     .++.++||||+||++|+|++|.
T Consensus       163 kp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~-y~aPE~l~~-----~~~~~~DiwslG~il~~ll~g~  234 (494)
T 3lij_A          163 KPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAY-YIAPEVLRK-----KYDEKCDVWSIGVILFILLAGY  234 (494)
T ss_dssp             SGGGEEESCSSTTCCEEECCCTTCEECBTTBC--BCCCCSCTT-TCCHHHHTT-----CBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ChhhEEEeCCCCCCcEEEEECCCCeECCCCcc--ccccCCCcC-eeCHHHHcc-----cCCCchhHHHHHHHHHHHHhCC
Confidence            6999999764   4599999999876554332  233678888 999999864     5889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCC--CCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPP--GEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+....+..+......+  ..+|++++++|++
T Consensus       235 ~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  274 (494)
T 3lij_A          235 PPFGG-QTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ  274 (494)
T ss_dssp             CSSCC-SSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHH
Confidence            99998 46666666666654332212  3689999998863

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=6.8e-25  Score=163.76  Aligned_cols=164  Identities=20%  Similarity=0.226  Sum_probs=112.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++.. .+...   ..+++++|+..++++.+.+..                    ....|||+.+..++.|+
T Consensus        54 ~l~~l~hp~iv~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~  129 (307)
T 2eva_A           54 QLSRVNHPNIVKL-YGACL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR  129 (307)
T ss_dssp             HHHHCCCTTBCCE-EEBCT---TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCC
T ss_pred             HHhcCCCCCcCeE-EEEEc---CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecC
Confidence            5677888887743 33322   347899999988887665420                    12358888544556677


Q ss_pred             CCCCCcEEEcCCCe-EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         64 YFSVDTFHQRLQFL-LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~-~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |+||+||+++.++. +||+|||++.......    ....|+.. |+|||++.+    ..++.++|+||+|+++|+|++|.
T Consensus       130 dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~g~  200 (307)
T 2eva_A          130 DLKPPNLLLVAGGTVLKICDFGTACDIQTHM----TNNKGSAA-WMAPEVFEG----SNYSEKCDVFSWGIILWEVITRR  200 (307)
T ss_dssp             CCSGGGEEEETTTTEEEECCCCC----------------CCTT-SSCHHHHTC----CCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CCChhHEEEeCCCCEEEEccccccccccccc----ccCCCCCc-eEChhhhCC----CCCCcHHHHHHHHHHHHHHHHCC
Confidence            77799999988876 7999999987654322    12457778 999999987    78889999999999999999999


Q ss_pred             CCCCCCCCcHH-HHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFE-QLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||........ ....+..+..+++ +..+|+.+++++++
T Consensus       201 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  239 (307)
T 2eva_A          201 KPFDEIGGPAFRIMWAVHNGTRPPL-IKNLPKPIESLMTR  239 (307)
T ss_dssp             CTTTTTCSSHHHHHHHHHTTCCCCC-BTTCCHHHHHHHHH
T ss_pred             CCchhhCccHHHHHHHHhcCCCCCc-ccccCHHHHHHHHH
Confidence            99986433332 3333445555555 45688999888763

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.93  E-value=1.3e-25  Score=167.80  Aligned_cols=169  Identities=18%  Similarity=0.200  Sum_probs=110.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCC--CceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDD--KKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++..+........  ...++++|+..++++.+.+..                 ....|||+.++   .|+|
T Consensus        65 ~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~d  141 (311)
T 3ork_A           65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI---IHRD  141 (311)
T ss_dssp             TCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCC
T ss_pred             HHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC---CcCC
Confidence            3455678777654433332222  245899999998888775421                 11347777655   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.+||+|||++.........  ......|++. |+|||++.+    ..++.++|+||+|+++|+|++|.
T Consensus       142 lkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~ll~g~  216 (311)
T 3ork_A          142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ-YLSPEQARG----DSVDARSDVYSLGCVLYEVLTGE  216 (311)
T ss_dssp             CCGGGEEEETTSCEEECCCSCC------------------CCT-TCCHHHHHT----CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcc-cCCHHHhcC----CCCCchHhHHHHHHHHHHHHhCC
Confidence            6699999999999999999999765443211  1122467888 999999988    78889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+..+...+..  +..+|+++++++.+
T Consensus       217 ~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  256 (311)
T 3ork_A          217 PPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK  256 (311)
T ss_dssp             CSCCC-SSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred             CCCCC-CChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHH
Confidence            99988 4555555555554322211  34688889888753

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=7.4e-26  Score=173.52  Aligned_cols=166  Identities=19%  Similarity=0.187  Sum_probs=118.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..++++.+.+..                  ....|||+.+++   |+|
T Consensus       164 ~~l~~l~hpniv~~-~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv---HrD  238 (377)
T 3cbl_A          164 RILKQYSHPNIVRL-IGVCT-QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI---HRD  238 (377)
T ss_dssp             HHHTTCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE---CSC
T ss_pred             HHHHhCCCCCEEEE-EEEEe-cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcC---Ccc
Confidence            36677888877644 44444 45678999999988888775421                  123477776654   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhc-ccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRG-LYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      +||+||+++.++.+||+|||++........... ....++.. |+|||++..    ..++.++|+||+||++|+|++ |.
T Consensus       239 lkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DvwslG~il~el~t~g~  313 (377)
T 3cbl_A          239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK-WTAPEALNY----GRYSSESDVWSFGILLWETFSLGA  313 (377)
T ss_dssp             CSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGG-GSCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcC-cCCHhHhcc----CCCCchhhHHHHHHHHHHHHhCCC
Confidence            669999999999999999999876443321101 10112344 999999987    678899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. |..+|+++.++++
T Consensus       314 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  349 (377)
T 3cbl_A          314 SPYPN-LSNQQTREFVEKGGRLPC-PELCPDAVFRLME  349 (377)
T ss_dssp             CSSTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99988 355455555556665555 5668999988875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=4.5e-25  Score=169.41  Aligned_cols=122  Identities=16%  Similarity=0.228  Sum_probs=89.9

Q ss_pred             CCceEEEeccCccchHHHH-----------------------HHHHHHHHHhhcchhcccccCCCCCcEEEc-CCCeEEE
Q psy17162         25 DKKVVLVTGKGEAEKVQKE-----------------------LETLRCIYIQDYHLCVRSTRYFSVDTFHQR-LQFLLHL   80 (182)
Q Consensus        25 ~~~~~~~~~~~~~~~l~~~-----------------------l~~~~~~~l~~~~~~h~~~~~lk~~nil~~-~~~~~kl   80 (182)
                      ...++++||+..+ ++.+.                       +.++  .|||+.+++|   +|+||+||+++ .++.+||
T Consensus       110 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL--~~LH~~gi~H---~Dikp~Nil~~~~~~~~kl  183 (383)
T 3eb0_A          110 NKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV--GFIHSLGICH---RDIKPQNLLVNSKDNTLKL  183 (383)
T ss_dssp             CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--HHHHTTTEEC---SCCCGGGEEEETTTTEEEE
T ss_pred             ceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCcCcc---CccCHHHEEEcCCCCcEEE
Confidence            3447799999885 43322                       2223  4777776555   55559999997 5789999


Q ss_pred             eccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162         81 FRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus        81 ~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      +|||.+........  .....+++. |+|||++.+   ...++.++|+||+||++|+|++|++||.+ ....+.+..++
T Consensus       184 ~Dfg~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~i~  255 (383)
T 3eb0_A          184 CDFGSAKKLIPSEP--SVAYICSRF-YRAPELMLG---ATEYTPSIDLWSIGCVFGELILGKPLFSG-ETSIDQLVRII  255 (383)
T ss_dssp             CCCTTCEECCTTSC--CCCCCCCSS-CCCHHHHTT---CSSCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHH
T ss_pred             EECCCCcccCCCCC--CcCcccCCC-ccCHHHhcC---CCCCCcchhhhhHHHHHHHHHhCCCCCCC-CChHHHHHHHH
Confidence            99999976544332  233567888 999999876   13478999999999999999999999998 45556666554

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.93  E-value=5.9e-25  Score=162.02  Aligned_cols=166  Identities=16%  Similarity=0.185  Sum_probs=121.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++ .+.++.. +...+++++|+..++++.+.+..                  ....+||+.+++   |+|
T Consensus        71 ~~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~---H~d  145 (283)
T 3gen_A           71 KVMMNLSHEKLV-QLYGVCT-KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL---HRD  145 (283)
T ss_dssp             HHHHTCCCTTBC-CEEEEEC-SSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC---CSS
T ss_pred             HHHhcCCCCCEe-eEEEEEe-cCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc---CCC
Confidence            366778887765 4444444 56678899999988887765421                  123477776555   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||.+...............++.. |+|||++..    ..++.++|+||+|+++|+|++ |..
T Consensus       146 ikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~~l~~l~t~g~~  220 (283)
T 3gen_A          146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY----SKFSSKSDIWAFGVLMWEIYSLGKM  220 (283)
T ss_dssp             CSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGG-GCCHHHHHH----CCCSHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CccceEEEcCCCCEEEccccccccccccccccccCCccCcc-cCCHHHhcc----CCCCchhhHHHHHHHHHHHHhCCCC
Confidence            56999999999999999999997765544322222445566 999999987    678999999999999999998 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ ....+....+..+..+.. +...++.++++++
T Consensus       221 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  255 (283)
T 3gen_A          221 PYER-FTNSETAEHIAQGLRLYR-PHLASEKVYTIMY  255 (283)
T ss_dssp             TTTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             Cccc-cChhHHHHHHhcccCCCC-CCcCCHHHHHHHH
Confidence            9988 455566666666654444 5668889988875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.93  E-value=3.2e-25  Score=179.47  Aligned_cols=165  Identities=19%  Similarity=0.230  Sum_probs=118.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++..+ ++..  ...+++++|+..++++.+++.                  ...+.|||+.+++|   +|
T Consensus       388 ~il~~l~hpniv~l~-~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH---rD  461 (613)
T 2ozo_A          388 QIMHQLDNPYIVRLI-GVCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH---RN  461 (613)
T ss_dssp             HHHTTCCCTTBCCEE-EEEE--SSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC---SC
T ss_pred             HHHHhCCCCCEeeEE-EEec--cCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEc---Cc
Confidence            367778888876544 4443  245889999999988877541                  11234777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      |||+||+++.++.+||+|||+++.........  .....++.. |+|||++..    ..++.++|||||||++|+|++ |
T Consensus       462 lkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~-y~APE~~~~----~~~~~~sDvwSlGv~l~ellt~G  536 (613)
T 2ozo_A          462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-WYAPECINF----RKFSSRSDVWSYGVTMWEALSYG  536 (613)
T ss_dssp             CSGGGEEEEETTEEEECCCSTTTTCC--------------CCT-TSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccc-eeCHhhhcC----CCCCcHHHHHHHHHHHHHHHHCC
Confidence            55999999999999999999998764332210  111233456 999999987    788999999999999999998 9


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..||.+. ...+....+..+..+.+ |..+|+++.+++.
T Consensus       537 ~~Pf~~~-~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~  573 (613)
T 2ozo_A          537 QKPYKKM-KGPEVMAFIEQGKRMEC-PPECPPELYALMS  573 (613)
T ss_dssp             CCTTTTC-CSHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCCCC-CHHHHHHHHHcCCCCCC-CCcCCHHHHHHHH
Confidence            9999984 55577777777776666 5568999999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.93  E-value=7.6e-25  Score=161.79  Aligned_cols=168  Identities=30%  Similarity=0.511  Sum_probs=109.9

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhc-chhcccc
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDY-HLCVRST   62 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~-~~~h~~~   62 (182)
                      ++.++|+|++. +.+... +...+++++|+..+ ++.+.+..                     ....|||+. ++   .|
T Consensus        60 ~~~~~h~~iv~-~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i---~H  133 (290)
T 3fme_A           60 MRTVDCPFTVT-FYGALF-REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV---IH  133 (290)
T ss_dssp             HTTCCCTTBCC-EEEEEE-CSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC---CC
T ss_pred             HHhCCCCeEEE-Eeeeee-ccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe---ec
Confidence            45567776654 444444 45668899998875 44332211                     113477775 55   45


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||.+........  .....+++. |+|||++........++.++|+||+|+++|+|++|.
T Consensus       134 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~-y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  210 (290)
T 3fme_A          134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVA--KDIDAGCKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILR  210 (290)
T ss_dssp             CCCSGGGCEECTTCCEEBCCC-----------------CCCCC-CSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTS
T ss_pred             CCCCHHHEEECCCCCEEEeecCCccccccccc--ccccCCCcc-ccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCC
Confidence            55669999999999999999999977654433  222467888 999999742111256788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+...+...+........+..++..+|+++++++++
T Consensus       211 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (290)
T 3fme_A          211 FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ  249 (290)
T ss_dssp             CSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHH
T ss_pred             CCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHH
Confidence            999875566666777677766777667889999998853

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.93  E-value=1.7e-25  Score=168.17  Aligned_cols=164  Identities=15%  Similarity=0.127  Sum_probs=113.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++..  +..+++++++..++++.+.+..                  ....|||+.+++   |+|+
T Consensus        68 ~l~~l~h~~iv~~-~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv---H~Di  141 (325)
T 3kex_A           68 AIGSLDHAHIVRL-LGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV---HRNL  141 (325)
T ss_dssp             HHHTCCCTTBCCE-EEEEC--BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHhcCCCCCcCeE-EEEEc--CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCC---CCcc
Confidence            5666788877644 44443  4567889999887777664311                  123477777655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..++.++|+||+|+++|+|++ |..
T Consensus       142 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~g~~  216 (325)
T 3kex_A          142 AARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK-WMALESIHF----GKYTHQSDVWSYGVTVWELMTFGAE  216 (325)
T ss_dssp             SSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTT-TSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             chheEEECCCCeEEECCCCcccccCcccccccccCCCCccc-ccChHHhcc----CCCChhhHhHHhHHHHHHHHhCCCC
Confidence            699999999999999999999775443221 1122345556 999999987    678999999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+. ...+....+..+..+.. +..+++++.++++
T Consensus       217 p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  251 (325)
T 3kex_A          217 PYAGL-RLAEVPDLLEKGERLAQ-PQICTIDVYMVMV  251 (325)
T ss_dssp             TTTTS-CTTHHHHHHHTTCBCCC-CTTBCTTTTHHHH
T ss_pred             Ccccc-CHHHHHHHHHcCCCCCC-CCcCcHHHHHHHH
Confidence            99883 44455555555554444 4456767666654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.93  E-value=1.1e-24  Score=167.79  Aligned_cols=169  Identities=16%  Similarity=0.218  Sum_probs=110.2

Q ss_pred             HHHHhCC-CCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQ-DEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.+ +++++.+.++.. +...++++||+ ..+++.+.+..                 ..+.|||+.++   .|+||
T Consensus       107 ~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~E~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i---vHrDl  181 (390)
T 2zmd_A          107 YLNKLQQHSDKIIRLYDYEI-TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI---VHSDL  181 (390)
T ss_dssp             HHHHHTTTCTTBCCEEEEEE-CSSEEEEEEEC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTC---CCCCC
T ss_pred             HHHHcccCCCeEEEEEEEEe-cCCEEEEEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCC
Confidence            5667765 455566666665 45568899994 44555553311                 11237777655   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCC-------CCCCCccchHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGN-------PSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~-------~~~~~~~~Diwslg~~l~~  137 (182)
                      ||+||+++ ++.+||+|||++......... .....+|++. |+|||++.....       ...++.++||||+||++|+
T Consensus       182 kp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~e  259 (390)
T 2zmd_A          182 KPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN-YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  259 (390)
T ss_dssp             CGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGG-GCCHHHHHCC------------CCHHHHHHHHHHHHHH
T ss_pred             CHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCC-ccChHHhhhccccccccccccCCCChhhHHHHHHHHHH
Confidence            69999995 688999999999876543221 1233678888 999999864100       1357889999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhhCC-CCCCCCCCCCHHHHHHhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQDD-PPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~s~~~~~~i~  180 (182)
                      |++|..||.+.......+..+.... ...+ +...+++++++++
T Consensus       260 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  302 (390)
T 2zmd_A          260 MTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLK  302 (390)
T ss_dssp             HHHSSCTTTTCCCHHHHHHHHHCTTSCCCC-CCCSCHHHHHHHH
T ss_pred             HHHCCCcchhhhHHHHHHHHHhCccccCCC-CccchHHHHHHHH
Confidence            9999999987444445555555433 2333 4556888998875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.93  E-value=1.2e-24  Score=160.09  Aligned_cols=162  Identities=19%  Similarity=0.226  Sum_probs=115.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.++.. +...+++++++..++++.+.+..                 ....|||+.+++   |+|+|
T Consensus        62 ~l~~l~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~---H~dlk  136 (279)
T 3fdn_A           62 IQSHLRHPNIL-RLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI---HRDIK  136 (279)
T ss_dssp             HHTTCCCTTBC-CEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCE---ECCCC
T ss_pred             HHHcCCCCCCc-chhheEe-cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEe---cccCC
Confidence            56667777766 4444444 45678899999988887665421                 113477776554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.++|+|||++........   ....++.. |+|||.+.+    ..++.++|+||+|+++|+|++|..||.
T Consensus       137 p~Nili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~  208 (279)
T 3fdn_A          137 PENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLD-YLPPEMIEG----RMHDEKVDLWSLGVLCYEFLVGKPPFE  208 (279)
T ss_dssp             GGGEEECTTSCEEECSCCEESCC-----------CCCCT-TCCHHHHTT----CCCCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             hHhEEEcCCCCEEEEeccccccCCcccc---cccCCCCC-ccCHhHhcc----CCCCccchhHhHHHHHHHHHHCCCCCC
Confidence            9999999999999999998866544332   22567778 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+... ...+ +..+++++++++++
T Consensus       209 ~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~li~~  240 (279)
T 3fdn_A          209 A-NTYQETYKRISRV-EFTF-PDFVTEGARDLISR  240 (279)
T ss_dssp             C-SSHHHHHHHHHHT-CCCC-CTTSCHHHHHHHHH
T ss_pred             C-CcHHHHHHHHHhC-CCCC-CCcCCHHHHHHHHH
Confidence            7 4444545444443 3445 45688999998864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=1.5e-25  Score=177.44  Aligned_cols=166  Identities=16%  Similarity=0.183  Sum_probs=119.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..++++.+++..                   ..+.|||+.++   .|+
T Consensus       268 ~~l~~l~hpniv~l-~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vHr  342 (495)
T 1opk_A          268 AVMKEIKHPNLVQL-LGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHR  342 (495)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECS
T ss_pred             HHHHhcCCCCEeeE-EEEEe-cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccC
Confidence            46778888887644 44444 45678999999988888775421                   12347777655   455


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||||+||+++.++.+||+|||+++..............++.. |+|||++..    ..++.++|+|||||++|+|++ |.
T Consensus       343 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~sDvwSlG~~l~el~t~g~  417 (495)
T 1opk_A          343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAY----NKFSIKSDVWAFGVLLWEIATYGM  417 (495)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGG-GCCHHHHHH----CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcc-eeCHhHHhc----CCCCcHHhHHhHHHHHHHHHhCCC
Confidence            566999999999999999999997654332211121234455 999999987    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+. ...+....+..+..... +..+|++++++++
T Consensus       418 ~p~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  453 (495)
T 1opk_A          418 SPYPGI-DLSQVYELLEKDYRMER-PEGCPEKVYELMR  453 (495)
T ss_dssp             CSSTTC-CGGGHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCCC-CHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            999883 44455555555555545 5678999998875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=1.1e-24  Score=166.19  Aligned_cols=165  Identities=15%  Similarity=0.227  Sum_probs=106.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 .+..|||+.+++|   +|+|
T Consensus        69 ~l~~l~hpniv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH---~Dlk  143 (361)
T 3uc3_A           69 NHRSLRHPNIVR-FKEVIL-TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH---RDLK  143 (361)
T ss_dssp             HHHHCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCS---CCCC
T ss_pred             HHHhCCCCCCCc-EEEEEe-eCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCCC
Confidence            567788888764 444444 45678899999988888765421                 1234777776555   5555


Q ss_pred             CCcEEEcCCCe--EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC-ccchHHHHHHHHHHHHhCCC
Q psy17162         67 VDTFHQRLQFL--LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD-IRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        67 ~~nil~~~~~~--~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~-~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+++.++.  +||+|||+++.......  ....+|++. |+|||++.+    ..+. .++|+||+||++|+|++|..
T Consensus       144 p~Nill~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~~DiwslG~il~ell~g~~  216 (361)
T 3uc3_A          144 LENTLLDGSPAPRLKICDFGYSKSSVLHSQ--PKSTVGTPA-YIAPEVLLR----QEYDGKIADVWSCGVTLYVMLVGAY  216 (361)
T ss_dssp             GGGEEECSSSSCCEEECCCCCC-----------------CT-TSCHHHHHC----SSCCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHEEEcCCCCceEEEeecCccccccccCC--CCCCcCCCC-cCChhhhcC----CCCCCCeeeeehhHHHHHHHHhCCC
Confidence            99999987765  99999999875433222  223568888 999999987    5665 44899999999999999999


Q ss_pred             CCCCCCC---cHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGS---PFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~---~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      ||.+...   ....+..+.... ..+| ...+|+++++++++
T Consensus       217 Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~  257 (361)
T 3uc3_A          217 PFEDPEEPRDYRKTIQRILSVK-YSIPDDIRISPECCHLISR  257 (361)
T ss_dssp             SCC----CCCHHHHHHHHHTTC-CCCCTTSCCCHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHhcCC-CCCCCcCCCCHHHHHHHHH
Confidence            9987322   123333333332 3343 33689999998864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.92  E-value=5.3e-25  Score=161.07  Aligned_cols=167  Identities=16%  Similarity=0.172  Sum_probs=120.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..++++.+.+...                  ...+||+.++   .|+|
T Consensus        55 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~d  129 (268)
T 3sxs_A           55 QTMMKLSHPKLVK-FYGVCS-KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF---IHRD  129 (268)
T ss_dssp             HHHHHCCCTTBCC-EEEEEC-SSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE---EESS
T ss_pred             HHHHhCCCCCEee-EEEEEc-cCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCC
Confidence            3677788877764 444444 556788999999888877654221                  1346776654   5555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.++|+|||.+...............++.. |+|||++.+    ..++.++|+||+|+++|+|++ |..
T Consensus       130 ikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~~g~~  204 (268)
T 3sxs_A          130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK-WSAPEVFHY----FKYSSKSDVWAFGILMWEVFSLGKM  204 (268)
T ss_dssp             CSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGG-GCCHHHHHH----SEEETTHHHHHHHHHHHHHHTTTCC
T ss_pred             cCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcc-cCCHHHHhc----cCCchhhhhHHHHHHHHHHHcCCCC
Confidence            66999999999999999999987654433211222344556 999999987    678899999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.. ....+....+..+..... +...|+++++++++
T Consensus       205 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  240 (268)
T 3sxs_A          205 PYDL-YTNSEVVLKVSQGHRLYR-PHLASDTIYQIMYS  240 (268)
T ss_dssp             TTTT-SCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHHH
T ss_pred             Cccc-cChHHHHHHHHcCCCCCC-CCcChHHHHHHHHH
Confidence            9988 455555555656654434 56688999888753

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.92  E-value=3e-25  Score=166.98  Aligned_cols=165  Identities=20%  Similarity=0.219  Sum_probs=118.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+..                  ..+.|||+.++   .|+|+
T Consensus       103 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dl  177 (325)
T 3kul_A          103 IMGQFDHPNIIR-LEGVVT-RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDL  177 (325)
T ss_dssp             HHTTCCCTTBCC-EEEEEC-GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHhCCCCCCCc-EEEEEE-eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---eCCCC
Confidence            667788877764 444444 45668899999988888775411                  12347777665   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||++..........  .....++.. |+|||++..    ..++.++||||+|+++|+|++ |.
T Consensus       178 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Di~slG~il~ell~~g~  252 (325)
T 3kul_A          178 AARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR-WTAPEAIAF----RTFSSASDVWSFGVVMWEVLAYGE  252 (325)
T ss_dssp             SGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGG-GSCHHHHHH----CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcceEEECCCCCEEECCCCcccccccCccceeeccCCCCccc-ccCHhHhcC----CCCCcHHHHHHHHHHHHHHHcCCC
Confidence            6999999999999999999997765432211  111234556 999999987    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. +..+|+++.+++.
T Consensus       253 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  288 (325)
T 3kul_A          253 RPYWN-MTNRDVISSVEEGYRLPA-PMGCPHALHQLML  288 (325)
T ss_dssp             CTTTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCccc-CCHHHHHHHHHcCCCCCC-CCCcCHHHHHHHH
Confidence            99988 455566666666655555 5568999988875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.92  E-value=2.4e-25  Score=167.39  Aligned_cols=167  Identities=14%  Similarity=0.168  Sum_probs=114.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++. +.+... +....++++|+..++++.+.                   +.++  .|||+.+++|+   
T Consensus        57 ~~l~~l~hpnIv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL--~~LH~~givH~---  129 (323)
T 3tki_A           57 CINKMLNHENVVK-FYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV--VYLHGIGITHR---  129 (323)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-CSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHH--HHHHHTTEECS---
T ss_pred             HHHHhCCCCCCCe-EEEEEe-cCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHH--HHHHHCCcccc---
Confidence            3677888887764 444444 45677899999877666442                   2333  47887765554   


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATG  141 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g  141 (182)
                      |+||+||+++.++.+||+|||++........ ......+|++. |+|||++..    ..+ +.++|+||+||++|+|++|
T Consensus       130 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~~DiwslG~il~~ll~g  204 (323)
T 3tki_A          130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-YVAPELLKR----REFHAEPVDVWSCGIVLTAMLAG  204 (323)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGG-GSCHHHHHC----SSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             ccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcC-ccCcHHhcc----CCCCCCcccHHHHHHHHHHHHhC
Confidence            5559999999999999999999976543221 11223678888 999999987    454 6789999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..||.+...................+...+++++++++++
T Consensus       205 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          205 ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             SCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHH
Confidence            9999874333233333333322222234688888888753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.92  E-value=1.1e-24  Score=162.55  Aligned_cols=141  Identities=16%  Similarity=0.157  Sum_probs=99.6

Q ss_pred             hCCCCcEEEEEEeeecCC---CceEEEeccCccchHHHHHH-----------------H--HHHHHHhhcchhcccccCC
Q psy17162          8 FNQDEIGVTVSSVKTTDD---KKVVLVTGKGEAEKVQKELE-----------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~-----------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +.|+|++..+..+.....   ..+++++++... ++.+.+.                 .  ....|||+.+++   |+|+
T Consensus        71 ~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv---H~Dl  146 (308)
T 3g33_A           71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIV---HRDL  146 (308)
T ss_dssp             HCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             cCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc---cCCC
Confidence            448777654443333221   146788888764 5544321                 1  123477777655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++........  .....+++. |+|||++..    ..++.++|+||+||++|+|++|.+||
T Consensus       147 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~~l~~g~~pf  219 (308)
T 3g33_A          147 KPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLW-YRAPEVLLQ----STYATPVDMWSVGCIFAEMFRRKPLF  219 (308)
T ss_dssp             CTTTEEECTTSCEEECSCSCTTTSTTCCC--SGGGGCCCS-SCCHHHHHT----SCCCSTHHHHHHHHHHHHTTTSSCSC
T ss_pred             CHHHEEEcCCCCEEEeeCccccccCCCcc--cCCcccccc-ccCchHHcC----CCCCchHHHHHHHHHHHHHHhCCCCC
Confidence            69999999999999999999976543322  233567888 999999987    77899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQ  160 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~  160 (182)
                      .+ ....+.+..+..
T Consensus       220 ~~-~~~~~~~~~i~~  233 (308)
T 3g33_A          220 CG-NSEADQLGKIFD  233 (308)
T ss_dssp             CC-SSHHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHH
Confidence            88 455566665543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.92  E-value=9.5e-25  Score=163.67  Aligned_cols=144  Identities=17%  Similarity=0.177  Sum_probs=102.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------------HHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------------LRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------------~~~~~l~~~~~~h~   60 (182)
                      +++.++|+|++. +.++.. +...+++++|+..+ ++.+.+..                       .+..|||+.+++  
T Consensus        56 ~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv--  130 (317)
T 2pmi_A           56 LMKELKHENIVR-LYDVIH-TENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL--  130 (317)
T ss_dssp             HHTTCCBTTBCC-EEEEEC-CTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEE--
T ss_pred             HHHhcCCCCcce-EEEEEE-ECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCee--
Confidence            567788877764 444444 45678899998874 54443211                       112477776554  


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                       |+|+||+||+++.++.+||+|||++......... .....+++. |+|||++.+   ...++.++|+||+||++|+|++
T Consensus       131 -H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~el~~  204 (317)
T 2pmi_A          131 -HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT-FSSEVVTLW-YRAPDVLMG---SRTYSTSIDIWSCGCILAEMIT  204 (317)
T ss_dssp             -CCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC-CCCCCSCCT-TCCHHHHTT---CCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -eCCCChHHeEEcCCCCEEECcCccceecCCCccc-CCCCccccc-ccCchHhhC---CCCCCcHHHHHHHHHHHHHHHh
Confidence             5556699999999999999999998765432221 122567788 999999875   1357899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHh
Q psy17162        141 GRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~  159 (182)
                      |..||.+ ....+.+..+.
T Consensus       205 g~~pf~~-~~~~~~~~~i~  222 (317)
T 2pmi_A          205 GKPLFPG-TNDEEQLKLIF  222 (317)
T ss_dssp             SSCSCCC-SSHHHHHHHHH
T ss_pred             CCCCCCC-CChHHHHHHHH
Confidence            9999988 45555555543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.92  E-value=1.2e-24  Score=163.22  Aligned_cols=165  Identities=18%  Similarity=0.187  Sum_probs=120.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.+.|+|++. +.++.. +...+++++|+..++++.+.+..                 .+..|||+.+++   |+|+
T Consensus        67 ~~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iv---H~di  141 (321)
T 2a2a_A           67 SILRQVLHHNVIT-LHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA---HFDL  141 (321)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhCCCCCcce-EEEEEe-cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee---cCCC
Confidence            3677788888764 444444 45678899999988888775421                 123477776554   5556


Q ss_pred             CCCcEEEcCCC----eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         66 SVDTFHQRLQF----LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        66 k~~nil~~~~~----~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ||+||+++.++    .+||+|||++........  .....+++. |+|||++..    ..++.++|+||+|+++|+|++|
T Consensus       142 kp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g  214 (321)
T 2a2a_A          142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPE-FVAPEIVNY----EPLGLEADMWSIGVITYILLSG  214 (321)
T ss_dssp             SGGGEEESCTTSSSCCEEECCCTTCEECCTTCC--CCCCCSCGG-GCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ChHHEEEecCCCCcCCEEEccCccceecCcccc--ccccCCCCC-ccCcccccC----CCCCCccccHHHHHHHHHHHHC
Confidence            69999999887    799999999976554332  233567888 999999987    7788999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      ..||.+ ....+....+.... ..+++   ..+|+.+++++++
T Consensus       215 ~~pf~~-~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~  255 (321)
T 2a2a_A          215 ASPFLG-DTKQETLANITSVS-YDFDEEFFSHTSELAKDFIRK  255 (321)
T ss_dssp             CCSSCC-SSHHHHHHHHHTTC-CCCCHHHHTTCCHHHHHHHHT
T ss_pred             CCCCCC-CCHHHHHHHHHhcc-cccChhhhcccCHHHHHHHHH
Confidence            999988 45555555555543 23322   4678889998864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.92  E-value=5.7e-25  Score=179.12  Aligned_cols=165  Identities=16%  Similarity=0.232  Sum_probs=119.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++..+ ++.  .+..++++||+..++++.+.+..                  .+..|||+.++   .|+|+
T Consensus       444 ~l~~l~HpnIv~l~-~~~--~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi---vHrDi  517 (656)
T 2j0j_A          444 TMRQFDHPHIVKLI-GVI--TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---VHRDI  517 (656)
T ss_dssp             HHHHCCCTTBCCEE-EEE--CSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCC
T ss_pred             HHHhCCCCCCCeEE-EEE--ecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccccc
Confidence            56778888877544 443  34568899999998888775421                  11347777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      ||+||+++.++.+||+|||++...............++.. |+|||++..    ..++.++|+||+|+++|+|++ |..|
T Consensus       518 kp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          518 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF----RRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             SGGGEEEEETTEEEECCCCCCCSCCC----------CCGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             chHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcc-eeCHHHhcC----CCCCchhhHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999998765443222222345566 999999987    688999999999999999997 9999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ ....+....+..+..+++ +..+|+.+.+++++
T Consensus       593 f~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~  627 (656)
T 2j0j_A          593 FQG-VKNNDVIGRIENGERLPM-PPNCPPTLYSLMTK  627 (656)
T ss_dssp             TTT-CCHHHHHHHHHHTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHHcCCCCCC-CccccHHHHHHHHH
Confidence            988 456666777777766666 45689999998753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=2e-25  Score=170.59  Aligned_cols=165  Identities=18%  Similarity=0.230  Sum_probs=118.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------------HHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------------RCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------------~~~~l~~~~~~h   59 (182)
                      +++.++|+|++.. .++.. +....++++|+..++++.+.+...                        .+.|||+.+++ 
T Consensus       127 ~l~~l~hpnIv~~-~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv-  203 (367)
T 3l9p_A          127 IISKFNHQNIVRC-IGVSL-QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-  203 (367)
T ss_dssp             HHHHCCCTTBCCE-EEEEC-SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHHhCCCCCCCeE-EEEEe-cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCee-
Confidence            6777888887644 44444 456678999999888887755321                        23477777654 


Q ss_pred             ccccCCCCCcEEEcCCC---eEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQF---LLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~---~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                        |+||||+||+++.++   .+||+|||+++....... .......+++. |+|||++..    ..++.++|+||+||++
T Consensus       204 --HrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~DvwslG~il  276 (367)
T 3l9p_A          204 --HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPPEAFME----GIFTSKTDTWSFGVLL  276 (367)
T ss_dssp             --CSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGG-GCCHHHHHH----CCCCHHHHHHHHHHHH
T ss_pred             --CCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCccc-EECHHHhcC----CCCCcHHHHHHHHHHH
Confidence              555669999999655   599999999864322211 01112445667 999999987    7889999999999999


Q ss_pred             HHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        136 IELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       136 ~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|++ |..||.+ ....+....+..+..+.. +..+++.++++++
T Consensus       277 ~ellt~g~~pf~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  320 (367)
T 3l9p_A          277 WEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMT  320 (367)
T ss_dssp             HHHHTTSCCSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             HHHHhCCCCCCCC-CCHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            99998 9999988 456566666666665544 5678999988875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.92  E-value=1.3e-24  Score=160.84  Aligned_cols=168  Identities=17%  Similarity=0.191  Sum_probs=117.8

Q ss_pred             HHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++..+..+..  .+...+++++++..++++.+.+..                 ....|||+.+ .++.|+|
T Consensus        78 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~d  156 (290)
T 1t4h_A           78 MLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRD  156 (290)
T ss_dssp             HHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSC
T ss_pred             HHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECC
Confidence            5677888887755443322  234667899999988888775422                 1234777765 0144555


Q ss_pred             CCCCcEEEc-CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQR-LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~-~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      +||+||+++ .++.+||+|||++........   ....+++. |+|||++..     .++.++|+||+|+++|+|++|..
T Consensus       157 ikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~t~~-y~aPE~~~~-----~~~~~~Di~slG~~l~~l~~g~~  227 (290)
T 1t4h_A          157 LKCDNIFITGPTGSVKIGDLGLATLKRASFA---KAVIGTPE-FMAPEMYEE-----KYDESVDVYAFGMCMLEMATSEY  227 (290)
T ss_dssp             CCGGGEEESSTTSCEEECCTTGGGGCCTTSB---EESCSSCC-CCCGGGGGT-----CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCHHHEEEECCCCCEEEeeCCCccccccccc---ccccCCcC-cCCHHHHhc-----cCCCcchHHHHHHHHHHHHhCCC
Confidence            669999997 789999999999865443322   22567788 999998865     57899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+..........+..+..+...+...++++++++++
T Consensus       228 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  265 (290)
T 1t4h_A          228 PYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             TTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             CCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHH
Confidence            99885444444444545543333345678888888763

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.92  E-value=4.1e-25  Score=169.03  Aligned_cols=144  Identities=15%  Similarity=0.187  Sum_probs=96.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC----CCceEEEeccCccchHHHH-----------------HHHHHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKE-----------------LETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~-----------------l~~~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++..+..+....    ...+++++|+..+ .+.+.                 +.++  .|||+.+++|  
T Consensus        76 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al--~~lH~~~ivH--  150 (371)
T 2xrw_A           76 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGI--KHLHSAGIIH--  150 (371)
T ss_dssp             HHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHH--HHHHHTTCCC--
T ss_pred             HHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHH--HHHHHCCeec--
Confidence            3677788888765443333221    2367899999875 34332                 2333  3777776555  


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                       +|+||+||+++.++.+||+|||++........  ....++++. |+|||++.+    ..++.++|+||+||++|+|++|
T Consensus       151 -~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~el~~g  222 (371)
T 2xrw_A          151 -RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMIKG  222 (371)
T ss_dssp             -SCCCGGGEEECTTSCEEECCCCC------------------CT-TCCHHHHTT----CCCCTTHHHHHHHHHHHHHHHS
T ss_pred             -ccCCHHHEEEcCCCCEEEEEeecccccccccc--cCCceecCC-ccCHHHhcC----CCCCchHhHHHHHHHHHHHHhC
Confidence             55559999999999999999999976554322  223567888 999999988    7889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~  160 (182)
                      ..||.+ ....+.+..+..
T Consensus       223 ~~pf~~-~~~~~~~~~i~~  240 (371)
T 2xrw_A          223 GVLFPG-TDHIDQWNKVIE  240 (371)
T ss_dssp             SCSSCC-SSHHHHHHHHHC
T ss_pred             CCCCCC-CCHHHHHHHHHH
Confidence            999998 455566666554

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=6.1e-25  Score=161.84  Aligned_cols=166  Identities=15%  Similarity=0.153  Sum_probs=114.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .++..  ....++++++..++++.+.+..                  ....+||+.+++   |+|
T Consensus        65 ~~l~~l~h~~i~~~-~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~---H~d  138 (281)
T 3cc6_A           65 VIMKNLDHPHIVKL-IGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV---HRD  138 (281)
T ss_dssp             HHHHHHCCTTBCCE-EEEEC--SSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCC---CCC
T ss_pred             HHHHhCCCCCcceE-EEEEc--CCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcc---cCC
Confidence            35777888887644 34433  3456889999888777665421                  012467766555   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||.+...............++.. |+|||++..    ..++.++|+||+|+++|+|++ |..
T Consensus       139 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~llt~g~~  213 (281)
T 3cc6_A          139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESINF----RRFTTASDVWMFAVCMWEILSFGKQ  213 (281)
T ss_dssp             CSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CccceEEECCCCcEEeCccCCCcccccccccccccCCCCcc-eeCchhhcc----CCCCchhccHHHHHHHHHHHhCCCC
Confidence            66999999999999999999987665433211222345566 999999987    678899999999999999998 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.. ....+....+..+..++. +..+++.+++++++
T Consensus       214 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  249 (281)
T 3cc6_A          214 PFFW-LENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTR  249 (281)
T ss_dssp             TTTT-SCGGGHHHHHHHTCCCCC-CTTCCHHHHHHHHH
T ss_pred             Cccc-CChHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Confidence            9987 344455555555554545 45688889888753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=5.1e-25  Score=164.40  Aligned_cols=166  Identities=17%  Similarity=0.202  Sum_probs=118.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------------------
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------------------   46 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------------------   46 (182)
                      +++.++|+|++. +.+... +...+++++|+..++++.+.+..                                     
T Consensus        79 ~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  156 (314)
T 2ivs_A           79 VLKQVNHPHVIK-LYGACS-QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFA  156 (314)
T ss_dssp             HHTTCCCTTBCC-EEEEEC-SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHH
T ss_pred             HHhhCCCCceee-EEEEEe-cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHH
Confidence            566778877764 444444 45668899999887777665431                                     


Q ss_pred             ----HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCC
Q psy17162         47 ----LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        47 ----~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                          ....|||+.++   .|+|+||+||+++.++.+||+|||++......... ......++.. |+|||.+.+    ..
T Consensus       157 ~qi~~~l~~lH~~~i---vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~  228 (314)
T 2ivs_A          157 WQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK-WMAIESLFD----HI  228 (314)
T ss_dssp             HHHHHHHHHHHHTTE---ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGG-GCCHHHHHH----CE
T ss_pred             HHHHHHHHHHHHCCC---cccccchheEEEcCCCCEEEccccccccccccccceeccCCCCccc-ccChhhhcC----CC
Confidence                01247777654   55556699999999999999999998765432211 1122345566 999999987    67


Q ss_pred             CCccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ++.++|+||+|+++|+|++ |..||.+ .........+..+..+.. +..+|+++++++++
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  287 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPG-IPPERLFNLLKTGHRMER-PDNCSEEMYRLMLQ  287 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTT-CCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHhhcCCcCCC-CccCCHHHHHHHHH
Confidence            8899999999999999999 9999988 344455555555554545 56789999988753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.92  E-value=8.1e-25  Score=173.50  Aligned_cols=163  Identities=19%  Similarity=0.230  Sum_probs=120.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.++.. +...+++++|++.++++.+.+..                 ....|||+.+++   |+|+|
T Consensus        99 ~l~~l~hpniv-~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv---H~Dlk  173 (504)
T 3q5i_A           99 LLKSLDHPNII-KLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIV---HRDIK  173 (504)
T ss_dssp             HHHTCCCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCCS
T ss_pred             HHHhCCCCCCC-eEEEEEE-cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE---eCCCc
Confidence            66778887776 4445544 56778999999998888664311                 123477777655   55566


Q ss_pred             CCcEEEcCCC---eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         67 VDTFHQRLQF---LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        67 ~~nil~~~~~---~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+++.++   .+||+|||++........  ....+|++. |+|||++..     .++.++|+||+||++|+|++|.+
T Consensus       174 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~-----~~~~~~DiwslG~il~~ll~g~~  245 (504)
T 3q5i_A          174 PENILLENKNSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAY-YIAPEVLKK-----KYNEKCDVWSCGVIMYILLCGYP  245 (504)
T ss_dssp             GGGEEESSTTCCSSEEECCCTTCEECCTTSC--BCCCCSCTT-TCCHHHHTT-----CBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHEEEecCCCCccEEEEECCCCEEcCCCCc--cccccCCcC-CCCHHHhcc-----CCCchHHHHHHHHHHHHHHhCCC
Confidence            9999998776   699999999976654332  233678888 999999864     58899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+.+..+..+.. .++   ...+|++++++|++
T Consensus       246 pf~~-~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~  284 (504)
T 3q5i_A          246 PFGG-QNDQDIIKKVEKGKY-YFDFNDWKNISDEAKELIKL  284 (504)
T ss_dssp             SSCC-SSHHHHHHHHHHCCC-CCCHHHHTTSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCC-CCCccccCCCCHHHHHHHHH
Confidence            9998 466666666666642 232   14689999998864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=4.8e-25  Score=166.71  Aligned_cols=167  Identities=15%  Similarity=0.099  Sum_probs=116.8

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------------
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------------   46 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------------   46 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..++++.+.+..                                    
T Consensus       101 ~l~~l~~hp~iv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  178 (344)
T 1rjb_A          101 MMTQLGSHENIV-NLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFA  178 (344)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHH
T ss_pred             HHHhhcCCCCee-eEEEEEe-eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHH
Confidence            56777 666665 4555554 45668899999888777665421                                    


Q ss_pred             ----HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCC
Q psy17162         47 ----LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        47 ----~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                          ..+.|||+.+++   |+|+||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..
T Consensus       179 ~qi~~aL~~LH~~~iv---H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~  250 (344)
T 1rjb_A          179 YQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-WMAPESLFE----GI  250 (344)
T ss_dssp             HHHHHHHHHHHHTTEE---ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGG-GCCHHHHHH----CC
T ss_pred             HHHHHHHHHHHhCCcc---cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccC-ccCHHHhcc----CC
Confidence                013477776555   5556699999999999999999999765433211 0111344556 999999987    67


Q ss_pred             CCccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ++.++|+||+|+++|+|++ |..||.+..........+..+..+.. +..+++++.+++++
T Consensus       251 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  310 (344)
T 1rjb_A          251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ-PFYATEEIYIIMQS  310 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Confidence            8999999999999999998 99999884444333333444444444 55688999998763

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.92  E-value=2.2e-25  Score=175.94  Aligned_cols=164  Identities=20%  Similarity=0.261  Sum_probs=118.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH---------------H--HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE---------------T--LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------------~--~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++++..++++.+.+.               .  .+..|||+.+++|   +|+|
T Consensus        79 ~l~~l~hpniv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH---~Dlk  153 (484)
T 3nyv_A           79 LLKQLDHPNIMK-LYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH---RDLK  153 (484)
T ss_dssp             HHTTCCCTTBCC-EEEEEE-CSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCC---SCCC
T ss_pred             HHHhCCCCCCCc-EEEEEE-eCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee---CCCC
Confidence            667788887764 444444 4667889999998888866431               0  1134777776555   5555


Q ss_pred             CCcEEE---cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         67 VDTFHQ---RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        67 ~~nil~---~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||++   +.++.+||+|||++........  ....+|++. |+|||++.+     .++.++|+||+||++|+|++|.+
T Consensus       154 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~-----~~~~~~DiwslG~il~~ll~g~~  225 (484)
T 3nyv_A          154 PENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAY-YIAPEVLHG-----TYDEKCDVWSTGVILYILLSGCP  225 (484)
T ss_dssp             GGGEEESSSSTTCCEEECCTTHHHHBCCCCS--HHHHTTGGG-TCCHHHHHT-----CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHEEEecCCCCCcEEEEeeeeeEEcccccc--cccCCCCcc-ccCceeecC-----CCCCcceeHHHHHHHHHHHHCCC
Confidence            999999   4568999999998865543322  122567888 999999875     58899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCC-CCC-CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPP-RLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~-~~~-~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+.+..+..+... +.| ...+|++++++|++
T Consensus       226 pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  264 (484)
T 3nyv_A          226 PFNG-ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK  264 (484)
T ss_dssp             SSCC-SSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHH
Confidence            9998 5666667777665422 222 23689999998864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.92  E-value=5.3e-25  Score=164.48  Aligned_cols=168  Identities=16%  Similarity=0.158  Sum_probs=120.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRCI   50 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~~   50 (182)
                      +++.++++++++.+.+....+...+++++|+..++++.+.+..                                 ....
T Consensus        83 ~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~  162 (316)
T 2xir_A           83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME  162 (316)
T ss_dssp             HHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHH
Confidence            5667755555556666666566778999999888777665421                                 1124


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |||+.++   .|+|+||+||+++.++.+||+|||++........ .......++.. |+|||++..    ..++.++|+|
T Consensus       163 ~lH~~~i---~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Di~  234 (316)
T 2xir_A          163 FLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WMAPETIFD----RVYTIQSDVW  234 (316)
T ss_dssp             HHHHTTC---CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGG-GCCHHHHHH----CCCCHHHHHH
T ss_pred             HHHhCCc---ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCccee-ecCchhhcc----ccccchhHHH
Confidence            6777655   4555669999999999999999999876543221 11112345666 999999987    7788999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|+++|+|++ |..||.+..........+..+..+.. +..+++++++++.
T Consensus       235 slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  285 (316)
T 2xir_A          235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTML  285 (316)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCC-CCCCCHHHHHHHH
Confidence            99999999998 99999885445455555555655555 4568888888875

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.92  E-value=9.5e-25  Score=164.32  Aligned_cols=164  Identities=13%  Similarity=0.137  Sum_probs=114.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH---------------------HHHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE---------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.+.++++++.+.++.. +...+++++|+..++++.+.                     +.++  .|||+.+++|   
T Consensus        81 ~l~~l~~~~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L--~~LH~~givH---  154 (327)
T 3lm5_A           81 VLELAKSCPRVINLHEVYE-NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGV--YYLHQNNIVH---  154 (327)
T ss_dssp             HHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHH--HHHHHTTEEC---
T ss_pred             HHHhccCCCCEEEEEEEEE-eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHH--HHHHHCCeec---
Confidence            5666766566666666665 56678899998877654432                     2333  4788776555   


Q ss_pred             cCCCCCcEEEcC---CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         63 RYFSVDTFHQRL---QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        63 ~~lk~~nil~~~---~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      +|+||+||+++.   ++.+||+|||++........  .....+++. |+|||++..    ..++.++|+||+|+++|+|+
T Consensus       155 ~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwslG~il~~ll  227 (327)
T 3lm5_A          155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPE-YLAPEILNY----DPITTATDMWNIGIIAYMLL  227 (327)
T ss_dssp             SCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGG-GCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred             CcCChHHEEEecCCCCCcEEEeeCccccccCCccc--cccccCCcC-ccCCeeecC----CCCCchhhHHHHHHHHHHHH
Confidence            555599999988   78999999999977654332  222567888 999999987    78889999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCC--CCCCCCHHHHHHhhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRL--PPGEFSSDFKDFITL  181 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~~~~i~~  181 (182)
                      +|..||.+ ....+....+........  ....+++.+++++++
T Consensus       228 ~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  270 (327)
T 3lm5_A          228 THTSPFVG-EDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS  270 (327)
T ss_dssp             HSSCSSCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             hCCCCCCC-CCchHHHHHHHhcccccCchhhcccCHHHHHHHHH
Confidence            99999988 455455555544322111  134688999998763

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.92  E-value=2.6e-24  Score=158.71  Aligned_cols=162  Identities=21%  Similarity=0.259  Sum_probs=118.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .++.. +...+++++|+...+++.+.+..                 ....+||+.++   .|+|+|
T Consensus        67 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~  141 (284)
T 2vgo_A           67 IQSHLRHPNILRM-YNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV---IHRDIK  141 (284)
T ss_dssp             HHHTCCCTTBCCE-EEEEE-CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCCS
T ss_pred             HHhcCCCCCEeeE-EEEEE-cCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCC
Confidence            5677788777644 44444 45678899999988887665421                 11346776654   555566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++........   ....++.. |+|||++.+    ..++.++|+||+|+++|+|++|..||.
T Consensus       142 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~pf~  213 (284)
T 2vgo_A          142 PENLLMGYKGELKIADFGWSVHAPSLRR---RTMCGTLD-YLPPEMIEG----KTHDEKVDLWCAGVLCYEFLVGMPPFD  213 (284)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECSSSCB---CCCCSCGG-GCCHHHHTT----CCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             HHHEEEcCCCCEEEecccccccCccccc---ccccCCCC-cCCHHHhcc----CCCCcccchhhHHHHHHHHHHCCCCCC
Confidence            9999999999999999999865443221   22567778 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+.... ..+ +..+|+++++++++
T Consensus       214 ~-~~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~  245 (284)
T 2vgo_A          214 S-PSHTETHRRIVNVD-LKF-PPFLSDGSKDLISK  245 (284)
T ss_dssp             C-SSHHHHHHHHHTTC-CCC-CTTSCHHHHHHHHH
T ss_pred             C-CCHhHHHHHHhccc-cCC-CCcCCHHHHHHHHH
Confidence            7 34445555554443 445 45689999998863

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.92  E-value=2.3e-24  Score=160.35  Aligned_cols=165  Identities=23%  Similarity=0.312  Sum_probs=120.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH--------------H--HHHHHHhhcchhcccccCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE--------------T--LRCIYIQDYHLCVRSTRYFSV   67 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------------~--~~~~~l~~~~~~h~~~~~lk~   67 (182)
                      +++.++|+|++..+. ... +...+++++++..++++.+.+.              .  ....+||+.+++   |+|+||
T Consensus        73 ~l~~l~h~~i~~~~~-~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~---H~dl~p  147 (303)
T 3a7i_A           73 VLSQCDSPYVTKYYG-SYL-KDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKA  147 (303)
T ss_dssp             HHHHCCCTTBCCEEE-EEE-ETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCCSG
T ss_pred             HHHhCCCCCEeEEEE-EEe-cCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCc---cCCCCh
Confidence            567778877764443 333 3556889999988877766431              0  113477776654   555669


Q ss_pred             CcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162         68 DTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus        68 ~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      +||+++.++.+||+|||.+......... .....++.. |+|||++..    ..++.++|+||+|+++|+|++|..||..
T Consensus       148 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~  221 (303)
T 3a7i_A          148 ANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPF-WMAPEVIKQ----SAYDSKADIWSLGITAIELARGEPPHSE  221 (303)
T ss_dssp             GGEEECTTSCEEECCCTTCEECBTTBCC-BCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             heEEECCCCCEEEeecccceecCccccc-cCccCCCcC-ccCHHHHhc----CCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence            9999999999999999998765443221 222567778 999999987    6788999999999999999999999987


Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        148 WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       148 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                       .........+..+.++.+ +..+|+.+++++++
T Consensus       222 -~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  253 (303)
T 3a7i_A          222 -LHPMKVLFLIPKNNPPTL-EGNYSKPLKEFVEA  253 (303)
T ss_dssp             -SCHHHHHHHHHHSCCCCC-CSSCCHHHHHHHHH
T ss_pred             -cCHHHHHHHhhcCCCCCC-ccccCHHHHHHHHH
Confidence             455555555666665555 55689999988753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.92  E-value=1.2e-24  Score=162.71  Aligned_cols=142  Identities=17%  Similarity=0.159  Sum_probs=100.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..+ ++.+.                    +.++  .|||+.+++   |
T Consensus        71 ~~l~~l~hp~iv~~-~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l--~~LH~~~iv---H  142 (311)
T 3niz_A           71 SLLKELHHPNIVSL-IDVIH-SERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGV--AHCHQHRIL---H  142 (311)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC-CSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHH--HHHHHTTEE---C
T ss_pred             HHHHHcCCCCEeee-eeEEc-cCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHH--HHHHHCCcc---c
Confidence            36778888877644 44444 55678899998875 44332                    2233  377777655   5


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||++......... .....+++. |+|||++.+   ...++.++|+||+||++|+|++|.
T Consensus       143 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~ll~g~  217 (311)
T 3niz_A          143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRS-YTHEVVTLW-YRAPDVLMG---SKKYSTSVDIWSIGCIFAEMITGK  217 (311)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEETTSCCC----CCCCCCT-TCCHHHHTT---CCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCchHhEEECCCCCEEEccCcCceecCCCccc-ccCCcccCC-cCCHHHhcC---CCCCCchHHhHHHHHHHHHHHhCC
Confidence            555699999999999999999999765433221 222567888 999999875   145789999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHH
Q psy17162        143 FPYDTWGSPFEQLKQV  158 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i  158 (182)
                      .||.+. ...+.+..+
T Consensus       218 ~pf~~~-~~~~~~~~i  232 (311)
T 3niz_A          218 PLFPGV-TDDDQLPKI  232 (311)
T ss_dssp             CSCCCS-STTTHHHHH
T ss_pred             CCCCCC-ChHHHHHHH
Confidence            999873 333444443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.92  E-value=2e-24  Score=163.00  Aligned_cols=165  Identities=16%  Similarity=0.232  Sum_probs=119.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 ..+.|||+.+++   |+|+
T Consensus        93 ~~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv---H~dl  167 (335)
T 2owb_A           93 SIHRSLAHQHVVG-FHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI---HRDL  167 (335)
T ss_dssp             HHHHTCCCTTBCC-EEEEEE-CSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCC
T ss_pred             HHHHhCCCCCCCe-EEEEEe-cCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCE---ecCC
Confidence            3667788887764 444444 45678899999988877664321                 113477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... .....++.. |+|||++..    ..++.++|+||+|+++|+|++|..||
T Consensus       168 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~pf  241 (335)
T 2owb_A          168 KLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPN-YIAPEVLSK----KGHSFEVDVWSIGCIMYTLLVGKPPF  241 (335)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCCS-SCCHHHHHT----SCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CchhEEEcCCCCEEEeeccCceecccCccc-ccccCCCcc-ccCHHHhcc----CCCCchhhHHHHHHHHHHHHHCcCCC
Confidence            699999999999999999998765433221 222567788 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ....+....+..+. ..+ +..+++++++++++
T Consensus       242 ~~-~~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~  274 (335)
T 2owb_A          242 ET-SCLKETYLRIKKNE-YSI-PKHINPVAASLIQK  274 (335)
T ss_dssp             CC-SSHHHHHHHHHHTC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHhcCC-CCC-CccCCHHHHHHHHH
Confidence            87 34445555554443 445 45688999888763

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.92  E-value=7.5e-25  Score=164.34  Aligned_cols=167  Identities=16%  Similarity=0.201  Sum_probs=110.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCC-----ceEEEeccCccchHHHHHHH-----------------------HHHHHHhhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDK-----KVVLVTGKGEAEKVQKELET-----------------------LRCIYIQDY   55 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~-----------------------~~~~~l~~~   55 (182)
                      +++.++|+|++..+ ++......     ..++++++..++++.+.+..                       ....|||+.
T Consensus        78 ~l~~l~h~~iv~~~-~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~  156 (323)
T 3qup_A           78 CMKEFDHPHVAKLV-GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR  156 (323)
T ss_dssp             HHTTCCCTTBCCCC-EEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCceehhh-ceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC
Confidence            56677787776433 33332221     23788999888777664421                       013477777


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +++   |+|+||+||+++.++.+||+|||++......... ......++.. |+|||.+.+    ..++.++|+||+||+
T Consensus       157 ~iv---H~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~i  228 (323)
T 3qup_A          157 NFI---HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK-WLALESLAD----NLYTVHSDVWAFGVT  228 (323)
T ss_dssp             TCC---CSCCSGGGEEECTTSCEEECCCCC-----------------CCGG-GCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred             Ccc---cCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCccc-ccCchhhcC----CCCCCccchhhHHHH
Confidence            654   5556699999999999999999999765443221 1111334556 999999987    678899999999999


Q ss_pred             HHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        135 LIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       135 l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|+|++ |..||.+ ....+....+..+..+.. +..+++++++++++
T Consensus       229 l~ell~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  274 (323)
T 3qup_A          229 MWEIMTRGQTPYAG-IENAEIYNYLIGGNRLKQ-PPECMEEVYDLMYQ  274 (323)
T ss_dssp             HHHHHTTSCCTTTT-CCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             HHHHHhCCCCCccc-cChHHHHHHHhcCCCCCC-CCccCHHHHHHHHH
Confidence            999999 9999988 455566666666655555 45688999998763

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.92  E-value=4.7e-25  Score=166.58  Aligned_cols=167  Identities=19%  Similarity=0.202  Sum_probs=120.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------------
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------------   46 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------------   46 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..++++.+.+..                                    
T Consensus       102 ~~l~~l~hp~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  179 (343)
T 1luf_A          102 ALMAEFDNPNIVKL-LGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI  179 (343)
T ss_dssp             HHHHTCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHH
T ss_pred             HHHHhCCCCCEEEE-EEEEc-cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHH
Confidence            36677888777644 44444 45678899999988887765432                                    


Q ss_pred             -----HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCC
Q psy17162         47 -----LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPS  120 (182)
Q Consensus        47 -----~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~  120 (182)
                           ....|||+.++   .|+|+||+||+++.++.+||+|||++........ .......++.. |+|||++..    .
T Consensus       180 ~~qi~~~l~~LH~~~i---vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~  251 (343)
T 1luf_A          180 ARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFY----N  251 (343)
T ss_dssp             HHHHHHHHHHHHHTTC---CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGG-GCCHHHHHH----C
T ss_pred             HHHHHHHHHHHHhCCe---ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccce-ecChhhhcc----C
Confidence                 01346776655   4555669999999999999999999865433221 00112445666 999999987    6


Q ss_pred             CCCccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        121 NYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       121 ~~~~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .++.++|+||+|+++|+|++ |..||.+ ....+....+..+..+.+ +..+|+++++++++
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  311 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYG-MAHEEVIYYVRDGNILAC-PENCPLELYNLMRL  311 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCC-CChHHHHHHHhCCCcCCC-CCCCCHHHHHHHHH
Confidence            78899999999999999999 9999988 455566666666665555 56789999988753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=3.6e-25  Score=179.69  Aligned_cols=165  Identities=18%  Similarity=0.209  Sum_probs=118.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .++..  ...++++||+..++++.+.+..                 ..+.|||+.+++   |+||
T Consensus       422 ~il~~l~hpnIv~l-~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~ii---HrDL  495 (635)
T 4fl3_A          422 NVMQQLDNPYIVRM-IGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV---HRDL  495 (635)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE--SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHHhCCCCCEeeE-EEEEe--cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEe---CCCC
Confidence            36778888887644 44444  3457899999999888775421                 123477777655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||+++.......  .......++.. |+|||++..    ..++.++||||+||++|+|++ |.
T Consensus       496 kp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~-y~APE~~~~----~~~~~~sDvwSlGv~l~ellt~G~  570 (635)
T 4fl3_A          496 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK-WYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQ  570 (635)
T ss_dssp             SGGGEEEEETTEEEECCTTHHHHTTC-------------CGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCcee-eeChhhhcC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence            69999999999999999999876543321  11122334556 999999987    789999999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..+.. +..+|+++.++++
T Consensus       571 ~Pf~~-~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~  606 (635)
T 4fl3_A          571 KPYRG-MKGSEVTAMLEKGERMGC-PAGCPREMYDLMN  606 (635)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            99998 455566666667766666 5668999999875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=3e-25  Score=169.98  Aligned_cols=166  Identities=15%  Similarity=0.201  Sum_probs=109.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++...+....++++|+..++++.+++..                  ....|||+.+++   |+|+
T Consensus       143 il~~l~hpnIv~-~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---HrDl  218 (373)
T 3c1x_A          143 IMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV---HRDL  218 (373)
T ss_dssp             TSTTCCCTTBCC-CCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHhCCCCCcce-EEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEe---cCcc
Confidence            456677877764 344444455678899999988887775421                  123477777655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      ||+||+++.++.+||+|||++.........   ......++.. |+|||++..    ..++.++|+||+|+++|+|++ |
T Consensus       219 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~DvwSlG~il~ellt~~  293 (373)
T 3c1x_A          219 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALESLQT----QKFTTKSDVWSFGVLLWELMTRG  293 (373)
T ss_dssp             CGGGEEECTTCCEEECCC---------------------CCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             chheEEECCCCCEEEeeccccccccccccccccccCCCCCccc-ccChHHhcC----CCCCcHHHHHHHHHHHHHHHhCc
Confidence            699999999999999999999765432210   0121344556 999999987    788999999999999999999 7


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .+||.+. ...+....+..+..+.. |..+|+.+.+++.
T Consensus       294 ~~p~~~~-~~~~~~~~~~~~~~~~~-p~~~~~~l~~li~  330 (373)
T 3c1x_A          294 APPYPDV-NTFDITVYLLQGRRLLQ-PEYCPDPLYEVML  330 (373)
T ss_dssp             CCSCTTS-CSSCHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCCCC-CHHHHHHHHHcCCCCCC-CCCCCHHHHHHHH
Confidence            8888873 44345555556654444 5678888888875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1.5e-24  Score=158.43  Aligned_cols=166  Identities=17%  Similarity=0.187  Sum_probs=120.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .+... +...+++++|+..++++.+.+..                  ....+||+.++   .|+|+
T Consensus        56 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl  130 (267)
T 3t9t_A           56 VMMKLSHPKLVQL-YGVCL-EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRDL  130 (267)
T ss_dssp             HHHTCCCTTBCCE-EEEEC-SSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSSC
T ss_pred             HHHhCCCCCEeeE-EEEEc-cCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCC
Confidence            5677788777644 44444 45668899999988887765421                  11346776654   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~p  144 (182)
                      ||+||+++.++.+||+|||.+...............++.. |+|||++..    ..++.++|+||+|+++|+|++ |..|
T Consensus       131 ~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~~g~~p  205 (267)
T 3t9t_A          131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-WASPEVFSF----SRYSSKSDVWSFGVLMWEVFSEGKIP  205 (267)
T ss_dssp             CGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             chheEEECCCCCEEEccccccccccccccccccccccccc-ccChhhhcC----CCccchhchhhhHHHHHHHhccCCCC
Confidence            6999999999999999999987765443322222445566 999999987    678899999999999999999 8999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ ....+....+..+..+.. +...|+++++++++
T Consensus       206 ~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~  240 (267)
T 3t9t_A          206 YEN-RSNSEVVEDISTGFRLYK-PRLASTHVYQIMNH  240 (267)
T ss_dssp             TTT-CCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHhcCCcCCC-CccCcHHHHHHHHH
Confidence            988 455566666666654444 55688888888753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=4.9e-25  Score=165.73  Aligned_cols=164  Identities=17%  Similarity=0.200  Sum_probs=116.1

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..++++.+.+..                                 ...
T Consensus        78 ~l~~l~~hp~iv-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  155 (327)
T 1fvr_A           78 VLCKLGHHPNII-NLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM  155 (327)
T ss_dssp             HHTTCCCCTTBC-CEEEEEE-ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHhccCCCchh-hhceeee-eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            56667 565554 4555554 45678899999988777665421                                 113


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .|||+.+++   |+|+||+||+++.++.+||+|||++........  .....++.. |+|||++..    ..++.++|+|
T Consensus       156 ~~LH~~~iv---H~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~  225 (327)
T 1fvr_A          156 DYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVR-WMAIESLNY----SVYTTNSDVW  225 (327)
T ss_dssp             HHHHHTTEE---CSCCSGGGEEECGGGCEEECCTTCEESSCEECC--C----CCTT-TCCHHHHHH----CEECHHHHHH
T ss_pred             HHHHhCCcc---CCCCccceEEEcCCCeEEEcccCcCcccccccc--ccCCCCCcc-ccChhhhcc----ccCCchhcch
Confidence            477776555   555669999999999999999999865433221  222345566 999999987    6788999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+|+++|+|++ |..||.+ ....+....+..+..+.. +..+|+++++++++
T Consensus       226 slG~il~ellt~g~~pf~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  276 (327)
T 1fvr_A          226 SYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEK-PLNCDDEVYDLMRQ  276 (327)
T ss_dssp             HHHHHHHHHHTTSCCTTTT-CCHHHHHHHGGGTCCCCC-CTTBCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCC-CcHHHHHHHhhcCCCCCC-CCCCCHHHHHHHHH
Confidence            99999999998 9999988 455555556666654544 45688999988763

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=2.2e-24  Score=161.69  Aligned_cols=166  Identities=17%  Similarity=0.259  Sum_probs=119.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------------HHHHHhhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------------RCIYIQDYH   56 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------------~~~~l~~~~   56 (182)
                      +++.++|+|++.. .++.. +...+++++|+..++++.+.+...                           ...+||+.+
T Consensus        81 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  158 (322)
T 1p4o_A           81 VMKEFNCHHVVRL-LGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  158 (322)
T ss_dssp             HGGGCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHhcCCCCEeee-EEEEc-cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5677888877644 44444 455688999998888777654321                           124666665


Q ss_pred             hhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      +   .|+|+||+||+++.++.+||+|||++......... ......+++. |+|||++.+    ..++.++|+||+|+++
T Consensus       159 i---~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il  230 (322)
T 1p4o_A          159 F---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKD----GVFTTYSDVWSFGVVL  230 (322)
T ss_dssp             C---BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGG-GCCHHHHHH----CCCCHHHHHHHHHHHH
T ss_pred             C---ccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCC-ccChhhhcc----CCCCchhhHHHHHHHH
Confidence            4   55556699999999999999999999765433211 1112345666 999999987    6788999999999999


Q ss_pred             HHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        136 IELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       136 ~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+|++ |..||.+ ....+....+..+..+.. +..+|+.+++++++
T Consensus       231 ~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  275 (322)
T 1p4o_A          231 WEIATLAEQPYQG-LSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRM  275 (322)
T ss_dssp             HHHHHTSCCTTTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             HHHHhcCCCcccc-CCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHH
Confidence            99999 8999988 455555555666655545 55689999988753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.92  E-value=1.2e-24  Score=160.01  Aligned_cols=166  Identities=19%  Similarity=0.247  Sum_probs=118.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++..  ...+++++++..++++.+.+..                   ....+||+.++   .|+
T Consensus        60 ~~l~~l~h~~i~~~-~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~  133 (279)
T 1qpc_A           60 NLMKQLQHQRLVRL-YAVVT--QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR  133 (279)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC--SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE---ECS
T ss_pred             HHHHhCCCcCcceE-EEEEc--CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecc
Confidence            36778888887644 34433  4457899999888777664310                   01246776654   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+||+|||.+...............++.. |+|||++..    ..++.++|+||+|+++|+|++ |.
T Consensus       134 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~~g~  208 (279)
T 1qpc_A          134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGR  208 (279)
T ss_dssp             CCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTT-TSCHHHHHH----CEECHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccC-ccChhhhcc----CCCCchhhhHHHHHHHHHHHhCCC
Confidence            566999999999999999999987654432211122344556 999999987    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+..+..+.. +..+|+++++++++
T Consensus       209 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  245 (279)
T 1qpc_A          209 IPYPG-MTNPEVIQNLERGYRMVR-PDNCPEELYQLMRL  245 (279)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCcc-cCHHHHHHHHhcccCCCC-cccccHHHHHHHHH
Confidence            99988 455555666666654444 56788999988753

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.92  E-value=4e-24  Score=161.86  Aligned_cols=170  Identities=16%  Similarity=0.208  Sum_probs=109.3

Q ss_pred             HHHHhCCC-CcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQD-EIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.++ ++++.+.++.. +...++++||+ ..+++.+.+..                 ..+.|||+.++   .|+|+
T Consensus        60 ~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---iHrDi  134 (343)
T 3dbq_A           60 YLNKLQQHSDKIIRLYDYEI-TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI---VHSDL  134 (343)
T ss_dssp             HHHHHTTTCTTBCCEEEEEE-CSSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCC
T ss_pred             HHHhhhhcCCceEEEeeeEe-eCCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCC
Confidence            56667763 55666666666 55678899995 45566554311                 11237777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCC-------CCCCCCccchHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSG-------NPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-------~~~~~~~~~Diwslg~~l~~  137 (182)
                      ||+||+++ ++.+||+|||++......... .....+|++. |+|||++....       ....++.++||||+||++|+
T Consensus       135 kp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~e  212 (343)
T 3dbq_A          135 KPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  212 (343)
T ss_dssp             CGGGEEEE-TTEEEECCCSSSCCC------------CCCCS-SCCHHHHHHCC-----------CCHHHHHHHHHHHHHH
T ss_pred             CcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcC-cCCHHHHhhccccccccccccCCCchhhHHHHHHHHHH
Confidence            69999997 688999999999876543321 1223578888 99999985210       01457789999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhhC-CCCCCCCCCCCHHHHHHhhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQD-DPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |++|..||.+..........+... ....+ +...++++++++++
T Consensus       213 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  256 (343)
T 3dbq_A          213 MTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLKC  256 (343)
T ss_dssp             HHHSSCTTTTCCSHHHHHHHHHCTTSCCCC-CCCSCHHHHHHHHH
T ss_pred             HHhCCCcchhhhhHHHHHHHHhcCCcccCC-cccCCHHHHHHHHH
Confidence            999999998744444445554443 22333 55677888888763

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.92  E-value=7.1e-25  Score=170.25  Aligned_cols=167  Identities=18%  Similarity=0.220  Sum_probs=108.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++.  +...+++++|+..++++.+.                   +.++  .|||+.+++   |+
T Consensus       192 ~~l~~l~hpniv~l-~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l--~~LH~~~iv---Hr  263 (419)
T 3i6u_A          192 EILKKLNHPCIIKI-KNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV--QYLHENGII---HR  263 (419)
T ss_dssp             HHHHHCCCTTBCCC-CEEE--ESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHH--HHHHHTTCC---CS
T ss_pred             HHHHhCCCCCEeeE-EEEE--ecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH--HHHHHCCcc---cc
Confidence            36778889888753 3333  34457899999887776542                   2333  488877655   55


Q ss_pred             CCCCCcEEEcCCC---eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRLQF---LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~~~---~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |+||+||+++.++   .+||+|||++........  ....+|++. |+|||++.... ...++.++|+||+||++|+|++
T Consensus       264 Dlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~~~-~~~~~~~~DiwslG~il~~llt  339 (419)
T 3i6u_A          264 DLKPENVLLSSQEEDCLIKITDFGHSKILGETSL--MRTLCGTPT-YLAPEVLVSVG-TAGYNRAVDCWSLGVILFICLS  339 (419)
T ss_dssp             CCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CT-TCCTTTTC-----CTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCChHhEEEecCCCcceEEEeecccceecCCCcc--ccccCCCCC-ccCceeeecCC-CCCCCchhhhHhHHHHHHHHHH
Confidence            5559999997654   599999999987655432  233678888 99999986311 1467789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      |.+||.+..........+..+.....+  ...+|+++++++++
T Consensus       340 g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  382 (419)
T 3i6u_A          340 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK  382 (419)
T ss_dssp             SSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             CCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHH
Confidence            999998743332333344444433222  13678899988763

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.92  E-value=4.2e-24  Score=157.41  Aligned_cols=165  Identities=15%  Similarity=0.153  Sum_probs=117.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .+... +....++++++..++++.+.+..                 ....|||+.+++   |+|+|
T Consensus        58 ~l~~l~h~~i~~~-~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~---H~dik  132 (284)
T 3kk8_A           58 ICRKLQHPNIVRL-HDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV---HRNLK  132 (284)
T ss_dssp             HHHHCCCTTBCCE-EEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCCC
T ss_pred             HHHHcCCCCcCeE-EEEEE-cCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcC---cCCCC
Confidence            6777888777644 44444 45667899999988887654311                 123477777655   55566


Q ss_pred             CCcEEEcCCCe---EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         67 VDTFHQRLQFL---LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        67 ~~nil~~~~~~---~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+++.++.   +||+|||.+........  .....+++. |+|||++.+    ..++.++|+||+|+++|+|++|..
T Consensus       133 p~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~l~~g~~  205 (284)
T 3kk8_A          133 PENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPG-YLSPEVLKK----DPYSKPVDIWACGVILYILLVGYP  205 (284)
T ss_dssp             GGGEEESSSSTTCCEEECCCTTCEECCSSCB--CCCSCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHEEEecCCCCCcEEEeeceeeEEcccCcc--ccCCCCCcC-CcCchhhcC----CCCCcccchHHHHHHHHHHHHCCC
Confidence            99999987655   99999999866554332  223567888 999999988    778899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCC-CCC-CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPP-RLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~-~~~-~~~~s~~~~~~i~~  181 (182)
                      ||.+ .........+..+... +.+ ...+|+++++++++
T Consensus       206 pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (284)
T 3kk8_A          206 PFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS  244 (284)
T ss_dssp             SSCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             CCCC-CchhHHHHHHHhccccCCchhhcccCHHHHHHHHH
Confidence            9988 4554555555544322 111 23688999998863

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.92  E-value=3e-25  Score=169.32  Aligned_cols=134  Identities=13%  Similarity=0.060  Sum_probs=97.1

Q ss_pred             HHHhCCCCcEEEEEEeeecC--CCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          5 RAVFNQDEIGVTVSSVKTTD--DKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++.++|+|++..+.......  ...++++||+. ++++.+.+..                  ..+.|||+.++   .|+|
T Consensus       102 ~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i---iHrD  177 (364)
T 3op5_A          102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEY---VHGD  177 (364)
T ss_dssp             HTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---EEec
Confidence            34566777765444333322  24577999998 7888775421                  12347777655   4555


Q ss_pred             CCCCcEEEc--CCCeEEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         65 FSVDTFHQR--LQFLLHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        65 lk~~nil~~--~~~~~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      |||+||+++  .++.+||+|||+++.........      .....|+.. |+|||++.+    ..++.++||||+||++|
T Consensus       178 lkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~~l~  252 (364)
T 3op5_A          178 IKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIE-FTSIDAHNG----VAPSRRGDLEILGYCMI  252 (364)
T ss_dssp             CCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTT-TCCHHHHTT----CCCCHHHHHHHHHHHHH
T ss_pred             CCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCC-ccCHHHhCC----CCCCchhhHHHHHHHHH
Confidence            669999999  88999999999997655432210      122458888 999999988    77899999999999999


Q ss_pred             HHHhCCCCCCC
Q psy17162        137 ELATGRFPYDT  147 (182)
Q Consensus       137 ~l~~g~~pf~~  147 (182)
                      +|++|..||.+
T Consensus       253 el~~g~~Pf~~  263 (364)
T 3op5_A          253 QWLTGHLPWED  263 (364)
T ss_dssp             HHHHSCCTTGG
T ss_pred             HHHhCCCCccc
Confidence            99999999986

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=1.7e-24  Score=163.70  Aligned_cols=167  Identities=20%  Similarity=0.289  Sum_probs=114.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH---------------------------------------
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL---------------------------------------   44 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---------------------------------------   44 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+                                       
T Consensus        81 ~l~~l~hpniv~-~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (345)
T 3hko_A           81 LMKKLHHPNIAR-LYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFR  158 (345)
T ss_dssp             HHHHCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CE
T ss_pred             HHHhCCCCCcce-eehhhc-cCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccccccc
Confidence            677788877764 444444 466788999998877665432                                       


Q ss_pred             --------------------HHHHHHHHhhcchhcccccCCCCCcEEEcCCC--eEEEeccCCCCCCCchhh---hhccc
Q psy17162         45 --------------------ETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQF--LLHLFRFALSGNQDDLLI---IRGLY   99 (182)
Q Consensus        45 --------------------~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~--~~kl~dfg~a~~~~~~~~---~~~~~   99 (182)
                                          .+  ..|||+.+++   |+|+||+||+++.++  .+||+|||++........   .....
T Consensus       159 ~~~~~~~~~~~~~~i~~qi~~~--l~~LH~~~iv---H~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  233 (345)
T 3hko_A          159 ESLDFVQREKLISNIMRQIFSA--LHYLHNQGIC---HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT  233 (345)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHH--HHHHHHTTEE---CCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-------
T ss_pred             ccccccccHHHHHHHHHHHHHH--HHHHHHCCcc---ccCCChhhEEEecCCCceEEEeeccccccccccCccccccccc
Confidence                                22  3477777654   555669999998776  899999999875432111   01223


Q ss_pred             CCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCC--CCCCHHHHH
Q psy17162        100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP--GEFSSDFKD  177 (182)
Q Consensus       100 ~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~  177 (182)
                      ..+++. |+|||++....  ..++.++|+||+|+++|+|++|..||.+ ....+....+..+......+  ..+|+++++
T Consensus       234 ~~gt~~-y~aPE~~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (345)
T 3hko_A          234 KAGTPY-FVAPEVLNTTN--ESYGPKCDAWSAGVLLHLLLMGAVPFPG-VNDADTISQVLNKKLCFENPNYNVLSPLARD  309 (345)
T ss_dssp             -CCCGG-GCCHHHHTCSS--SCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCTTSGGGGGSCHHHHH
T ss_pred             cCCCcc-ccCchhhccCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCC-CChHHHHHHHHhcccccCCcccccCCHHHHH
Confidence            567888 99999986411  4678899999999999999999999988 45556666665554222212  247889999


Q ss_pred             Hhhh
Q psy17162        178 FITL  181 (182)
Q Consensus       178 ~i~~  181 (182)
                      ++++
T Consensus       310 li~~  313 (345)
T 3hko_A          310 LLSN  313 (345)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8863

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.92  E-value=4.4e-24  Score=158.97  Aligned_cols=165  Identities=14%  Similarity=0.204  Sum_probs=118.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 ....|||+.+++|   +|+
T Consensus        58 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H---~di  132 (304)
T 2jam_A           58 AVLKKIKHENIVT-LEDIYE-STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH---RDL  132 (304)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCC---CSC
T ss_pred             HHHHhCCCCCeee-hhhhcc-cCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc---cCC
Confidence            3677788888764 444444 45678899999988887664321                 1234777776555   555


Q ss_pred             CCCcEEE---cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQ---RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~---~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||++   +.++.+||+|||.+........   ....+++. |+|||++.+    ..++.++|+||+|+++|+|++|.
T Consensus       133 kp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~  204 (304)
T 2jam_A          133 KPENLLYLTPEENSKIMITDFGLSKMEQNGIM---STACGTPG-YVAPEVLAQ----KPYSKAVDCWSIGVITYILLCGY  204 (304)
T ss_dssp             CGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT---HHHHSCCC-BCCTTTBSS----CSCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEEecCCCCCCEEEccCCcceecCCCcc---ccccCCCC-ccChHHhcc----CCCCchhhHHHHHHHHHHHHHCC
Confidence            5999999   6788999999999876544322   11457777 999999987    77889999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .||.+ .........+..+......  +..+|+++++++++
T Consensus       205 ~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  244 (304)
T 2jam_A          205 PPFYE-ETESKLFEKIKEGYYEFESPFWDDISESAKDFICH  244 (304)
T ss_dssp             CTTTT-SCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHH
Confidence            99988 4555555556555322111  24688999998863

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=1.5e-24  Score=159.55  Aligned_cols=164  Identities=16%  Similarity=0.219  Sum_probs=112.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------HHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------RCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .+....+...+++++|+..++++.+.+...                   ...+||+.++   .|+
T Consensus        66 ~~l~~l~h~~iv~~-~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~  141 (278)
T 1byg_A           66 SVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---VHR  141 (278)
T ss_dssp             HHHTTCCCTTBCCE-EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred             HHHHhCCCCCEeeE-EEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc---ccc
Confidence            35677888777644 444333556789999999888877654211                   1246666654   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+||+|||++........   . ..++.. |+|||.+..    ..++.++|+||+|+++|+|++ |.
T Consensus       142 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~-~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~t~g~  212 (278)
T 1byg_A          142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQD---T-GKLPVK-WTAPEALRE----KKFSTKSDVWSFGILLWEIYSFGR  212 (278)
T ss_dssp             CCSGGGEEECTTSCEEECCCCC----------------CCTT-TSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCcceEEEeCCCcEEEeecccccccccccc---C-CCcccc-ccCHHHhCC----CCCCchhcHHHHHHHHHHHHhCCC
Confidence            6669999999999999999999876543322   1 345666 999999987    678899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.. ....+....+..+..+.. +..+|+.+++++++
T Consensus       213 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  249 (278)
T 1byg_A          213 VPYPR-IPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMKN  249 (278)
T ss_dssp             CSCTT-SCGGGHHHHHTTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHhcCCCCCC-cccCCHHHHHHHHH
Confidence            99987 344455555556655555 55689999988753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.92  E-value=1.2e-24  Score=160.83  Aligned_cols=142  Identities=18%  Similarity=0.188  Sum_probs=98.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++.. .+... +...+++++|+... ++.+.                    +.++  .|||+.+++|   +
T Consensus        53 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~i~H---~  124 (288)
T 1ob3_A           53 ILKELKHSNIVKL-YDVIH-TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGI--AYCHDRRVLH---R  124 (288)
T ss_dssp             GGGGCCCTTBCCE-EEEEE-CSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHH--HHHHHTTCCC---S
T ss_pred             HHHhcCCCCEeee-eeEEc-cCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHH--HHHHHCCeec---C
Confidence            5677888777644 44444 45678899998764 44332                    2333  3777776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||++......... .....+++. |+|||++.+   ...++.++|+||+||++|+|++|.+
T Consensus       125 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~l~~g~~  199 (288)
T 1ob3_A          125 DLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLW-YRAPDVLMG---SKKYSTTIDIWSVGCIFAEMVNGTP  199 (288)
T ss_dssp             CCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCT-TCCHHHHTT---CCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCHHHEEEcCCCCEEEeECccccccCccccc-ccccccccc-ccCchheeC---CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            55599999999999999999988654432211 122467778 999999875   1357899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHh
Q psy17162        144 PYDTWGSPFEQLKQVV  159 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~  159 (182)
                      ||.+ ....+.+..+.
T Consensus       200 pf~~-~~~~~~~~~~~  214 (288)
T 1ob3_A          200 LFPG-VSEADQLMRIF  214 (288)
T ss_dssp             SCCC-SSHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHH
Confidence            9988 45545555443

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=4.1e-24  Score=159.63  Aligned_cols=166  Identities=14%  Similarity=0.119  Sum_probs=106.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+|
T Consensus        87 ~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~---H~dlk  161 (309)
T 2h34_A           87 TAGRLQEPHVVP-IHDFGE-IDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGAT---HRDVK  161 (309)
T ss_dssp             HHTTCCCTTBCC-EEEEEE-ETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCC---CSCCC
T ss_pred             HHhhcCCCCeeE-EEEEEe-eCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCC---cCCCC
Confidence            566677877764 444444 35678899999988887775421                 123477777655   45555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++...............++.. |+|||++..    ..++.++|+||+|+++|+|++|..||.
T Consensus       162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~pf~  236 (309)
T 2h34_A          162 PENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLY-YMAPERFSE----SHATYRADIYALTCVLYECLTGSPPYQ  236 (309)
T ss_dssp             GGGEEECTTSCEEECSCCC----------------CCGG-GCCGGGTCC--------CCCHHHHHHHHHHHHHHSSCSSC
T ss_pred             hHHEEEcCCCCEEEecCccCccccccccccccccCCCcC-ccCHHHHcC----CCCCchHhHHHHHHHHHHHHHCCCCCC
Confidence            999999999999999999987654432211222567777 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCC--CCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRL--PPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~~~~i~~  181 (182)
                      + ... ..+........+..  .+..+|+++++++++
T Consensus       237 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  271 (309)
T 2h34_A          237 G-DQL-SVMGAHINQAIPRPSTVRPGIPVAFDAVIAR  271 (309)
T ss_dssp             S-CHH-HHHHHHHHSCCCCGGGTSTTCCTHHHHHHHH
T ss_pred             C-chH-HHHHHHhccCCCCccccCCCCCHHHHHHHHH
Confidence            7 232 33333333322211  134688888888753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=1.7e-24  Score=161.52  Aligned_cols=167  Identities=17%  Similarity=0.142  Sum_probs=116.7

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------------------------H
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------------------------L   47 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------------------------~   47 (182)
                      +++.+ +|+|++ .+.+... +....++++|+..++++.+.+..                                   .
T Consensus        79 ~l~~l~~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~  156 (313)
T 1t46_A           79 VLSYLGNHMNIV-NLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK  156 (313)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHH
T ss_pred             HHhhcccCCCee-eEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHH
Confidence            56777 666665 4555554 45668899999888777665431                                   1


Q ss_pred             HHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccc
Q psy17162         48 RCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRS  126 (182)
Q Consensus        48 ~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~  126 (182)
                      ...|||+.+++   |+|+||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..++.++
T Consensus       157 ~l~~lH~~~i~---H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~  228 (313)
T 1t46_A          157 GMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMAPESIFN----CVYTFES  228 (313)
T ss_dssp             HHHHHHHTTCC---CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGG-GCCHHHHHH----CCCCHHH
T ss_pred             HHHHHHHCCee---cCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcce-eeChHHhcC----CCCChHH
Confidence            13477776554   5556699999999999999999998776543221 0111334556 999999887    6788999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        127 DVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       127 Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+||+|+++|+|++ |..||.+..........+..+..+.. +..+|+++++++++
T Consensus       229 Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  283 (313)
T 1t46_A          229 DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS-PEHAPAEMYDIMKT  283 (313)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC-CTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCC-cccCCHHHHHHHHH
Confidence            99999999999998 99999884444333333334443333 56788999988753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.1e-24  Score=160.93  Aligned_cols=166  Identities=19%  Similarity=0.218  Sum_probs=119.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++..+ ++.  ....+++++++..++++.+.+.                .  ....+||+.+++   |+|
T Consensus        62 ~~l~~l~h~~i~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~---H~d  135 (287)
T 1u59_A           62 QIMHQLDNPYIVRLI-GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV---HRD  135 (287)
T ss_dssp             HHHHHCCCTTBCCEE-EEE--ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHHhCCCCCEeEEE-EEe--cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEe---eCC
Confidence            367778887776544 443  3445889999988888776541                0  113477776655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      +||+||+++.++.+||+|||++.........  ......++.. |+|||++..    ..++.++|+||+|+++|+|++ |
T Consensus       136 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g  210 (287)
T 1u59_A          136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-WYAPECINF----RKFSSRSDVWSYGVTMWEALSYG  210 (287)
T ss_dssp             CSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGG-GCCHHHHHH----CEECHHHHHHHHHHHHHHHHTTS
T ss_pred             CchheEEEcCCCCEEECcccceeeeccCcceeecccccccccc-ccCHHHhcc----CCCCchhhHHHHHHHHHHHHcCC
Confidence            6699999999999999999998765432210  0111344566 999999987    678899999999999999998 9


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..||.+ ....+....+..+..+.+ +..+|++++++++.
T Consensus       211 ~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~  248 (287)
T 1u59_A          211 QKPYKK-MKGPEVMAFIEQGKRMEC-PPECPPELYALMSD  248 (287)
T ss_dssp             CCTTTT-CCTHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCccc-CCHHHHHHHHhcCCcCCC-CCCcCHHHHHHHHH
Confidence            999988 455566666666666666 45689999998853

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.92  E-value=3e-24  Score=160.38  Aligned_cols=167  Identities=21%  Similarity=0.303  Sum_probs=120.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++..+ +... +...+++++|+..++++.+.+..                  ....+||+.++   .|+|
T Consensus        76 ~~l~~l~h~~i~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~d  150 (314)
T 3com_A           76 SIMQQCDSPHVVKYY-GSYF-KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRD  150 (314)
T ss_dssp             HHHHTCCCTTBCCEE-EEEE-ETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHHhCCCCCCccEE-EEEE-eCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC---cCCC
Confidence            356778888776544 3333 35668899999988887765421                  11347777665   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.+||+|||.+......... .....++.. |+|||.+..    ..++.++|+||+|+++|+|++|..|
T Consensus       151 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p  224 (314)
T 3com_A          151 IKAGNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPF-WMAPEVIQE----IGYNCVADIWSLGITAIEMAEGKPP  224 (314)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEECBTTBSC-BCCCCSCGG-GCCHHHHSS----SCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             cCHHHEEECCCCCEEEeecccchhhhhhccc-cCccCCCCC-ccChhhcCC----CCCCccccHHHHHHHHHHHHhCCCC
Confidence            6699999999999999999998665443221 222567777 999999987    6788999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      |.+ .........+..+..+.+. +..+|+++++++++
T Consensus       225 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  261 (314)
T 3com_A          225 YAD-IHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ  261 (314)
T ss_dssp             TTT-SCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             CCC-CChHHHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence            987 3554555555555444443 34678888888763

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.92  E-value=2.5e-24  Score=159.48  Aligned_cols=144  Identities=18%  Similarity=0.116  Sum_probs=100.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++. +.++.. +...+++++|+..+..+...                   +.+  ..|||+.+++|   +|
T Consensus        54 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~--l~~lH~~~ivH---~d  126 (292)
T 3o0g_A           54 LLKELKHKNIVR-LHDVLH-SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG--LGFCHSRNVLH---RD  126 (292)
T ss_dssp             HHTTCCCTTBCC-EEEEEE-ETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHH--HHHHHHTTEEC---CC
T ss_pred             HHhcCCCCCEee-EEeEEE-eCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH--HHHHHhCCeec---CC
Confidence            567788877764 444444 45678899999875433221                   222  34777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.+||+|||++......... .....++.. |+|||++.+   ...++.++|+||+||++|+|++|..|
T Consensus       127 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~l~~~~~p  201 (292)
T 3o0g_A          127 LKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLW-YRPPDVLFG---AKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECCSCCSC-CCSCCSCGG-GCCHHHHTT---CSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred             CCHHHEEEcCCCCEEEeecccceecCCcccc-ccCCccccC-CcChHHHcC---CCCcCchHHHHHHHHHHHHHHHcCCC
Confidence            5599999999999999999999765433221 222567788 999999876   12378999999999999999987777


Q ss_pred             CCCCCCcHHHHHHHh
Q psy17162        145 YDTWGSPFEQLKQVV  159 (182)
Q Consensus       145 f~~~~~~~~~~~~i~  159 (182)
                      |.......+.+..+.
T Consensus       202 ~~~~~~~~~~~~~i~  216 (292)
T 3o0g_A          202 LFPGNDVDDQLKRIF  216 (292)
T ss_dssp             SCCCSSHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHH
Confidence            544245555555553

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=5.5e-24  Score=157.66  Aligned_cols=164  Identities=15%  Similarity=0.229  Sum_probs=118.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+|
T Consensus        68 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~---H~dl~  142 (294)
T 2rku_A           68 IHRSLAHQHVVG-FHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI---HRDLK  142 (294)
T ss_dssp             HHHTCCCTTBCC-EEEEEE-CSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCCC
T ss_pred             HHHhCCCCCEee-eeeeec-cCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc---ccCCC
Confidence            567788887764 444444 45678899999888777664321                 113477777655   55555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||.+......... .....++.. |+|||++..    ..++.++|+||+|+++|+|++|..||.
T Consensus       143 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~l~~g~~p~~  216 (294)
T 2rku_A          143 LGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPN-YIAPEVLSK----KGHSFEVDVWSIGCIMYTLLVGKPPFE  216 (294)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCCS-SCCHHHHTT----SCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             hHhEEEcCCCCEEEEeccCceecccCccc-cccccCCCC-cCCcchhcc----CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999998765433221 222567777 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      + ....+....+..+. ..+ +..+++++++++++
T Consensus       217 ~-~~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~  248 (294)
T 2rku_A          217 T-SCLKETYLRIKKNE-YSI-PKHINPVAASLIQK  248 (294)
T ss_dssp             C-SSHHHHHHHHHTTC-CCC-CTTSCHHHHHHHHH
T ss_pred             C-CCHHHHHHHHhhcc-CCC-ccccCHHHHHHHHH
Confidence            8 34444444444443 445 45688999888763

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.92  E-value=2.3e-24  Score=164.60  Aligned_cols=169  Identities=16%  Similarity=0.152  Sum_probs=117.8

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+ +|+|++ .+.+... .....++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus       152 ~l~~l~~hp~iv-~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~---H~Dl  226 (365)
T 2y7j_A          152 ILRQVAGHPHII-TLIDSYE-SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV---HRDL  226 (365)
T ss_dssp             HHHHHTTCTTBC-CEEEEEE-BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCC
T ss_pred             HHHHhcCCCCEe-EEEEEEe-eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee---cCCC
Confidence            45566 566665 4444444 45678899999998888775421                 123477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC--CCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG--NPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||+||+++.++.+||+|||++........  ....+|++. |+|||++.+..  ....++.++|+||+||++|+|++|..
T Consensus       227 kp~NIl~~~~~~ikl~DfG~~~~~~~~~~--~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~  303 (365)
T 2y7j_A          227 KPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPG-YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP  303 (365)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCTTCC--BCCCCSCGG-GCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CHHHEEECCCCCEEEEecCcccccCCCcc--cccCCCCCC-ccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence            69999999999999999999876554332  233678888 99999886311  01357789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      ||.+ .........+..+......  ....|+++++++++
T Consensus       304 pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  342 (365)
T 2y7j_A          304 PFWH-RRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR  342 (365)
T ss_dssp             SSCC-SSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHH
Confidence            9987 4555555556555432211  13678888888763

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.92  E-value=3.6e-24  Score=156.52  Aligned_cols=164  Identities=13%  Similarity=0.160  Sum_probs=114.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++..+..+...+...+++++|+..++++.+.+..                   ....|||+.+ ..+.|+|
T Consensus        60 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~d  138 (271)
T 3kmu_A           60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHA  138 (271)
T ss_dssp             GGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCC
T ss_pred             HHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCC
Confidence            4566777776644433333334778899999988888775421                   1134777665 0044555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC---ccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD---IRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~---~~~Diwslg~~l~~l~~g  141 (182)
                      +||+||+++.++.++++|||++......      ...+++. |+|||++.+    ..++   .++|+||+|+++|+|++|
T Consensus       139 ikp~Nil~~~~~~~~l~~~~~~~~~~~~------~~~~t~~-y~aPE~~~~----~~~~~~~~~~Di~slG~il~el~~g  207 (271)
T 3kmu_A          139 LNSRSVMIDEDMTARISMADVKFSFQSP------GRMYAPA-WVAPEALQK----KPEDTNRRSADMWSFAVLLWELVTR  207 (271)
T ss_dssp             CSGGGEEECTTSCEEEEGGGSCCTTSCT------TCBSCGG-GSCHHHHHS----CGGGSCHHHHHHHHHHHHHHHHHHC
T ss_pred             CccceEEEcCCcceeEEeccceeeeccc------CccCCcc-ccChhhhcc----CCCCCCCchhhHHHHHHHHHHHHhC
Confidence            6699999999999999988876543222      2456777 999999986    3333   379999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +.||.+ ....+....+.. +..+.+ +..+|+++++++++
T Consensus       208 ~~p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  246 (271)
T 3kmu_A          208 EVPFAD-LSNMEIGMKVALEGLRPTI-PPGISPHVSKLMKI  246 (271)
T ss_dssp             SCTTTT-SCHHHHHHHHHHSCCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCccc-cChHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Confidence            999988 345455555443 444555 56789999998763

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.92  E-value=1.9e-24  Score=164.48  Aligned_cols=132  Identities=21%  Similarity=0.348  Sum_probs=98.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++..+ +... +...+++++|+..++++.+.+..                 ....|||+.+  .+.|+|+|
T Consensus        84 ~l~~l~h~~iv~~~-~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlk  159 (360)
T 3eqc_A           84 VLHECNSPYIVGFY-GAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVK  159 (360)
T ss_dssp             GGGGCCCTTBCCEE-EEEE-ETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCS
T ss_pred             HHHHCCCCCEEEEe-EEEE-ECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCcc
Confidence            56677887776444 4444 45678899999988888775422                 1124666641  24556666


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||++.......   .....+++. |+|||++.+    ..++.++|+||+||++|+|++|..||.
T Consensus       160 p~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~pf~  231 (360)
T 3eqc_A          160 PSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRS-YMSPERLQG----THYSVQSDIWSMGLSLVEMAVGRYPIP  231 (360)
T ss_dssp             GGGEEECTTCCEEECCCCCCHHHHHHC-------CCCCT-TCCHHHHTT----CCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred             HHHEEECCCCCEEEEECCCCccccccc---ccCCCCCCC-eECHHHHcC----CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999986543222   222567888 999999988    788999999999999999999999997


Q ss_pred             C
Q psy17162        147 T  147 (182)
Q Consensus       147 ~  147 (182)
                      +
T Consensus       232 ~  232 (360)
T 3eqc_A          232 P  232 (360)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.92  E-value=3.2e-24  Score=158.68  Aligned_cols=170  Identities=16%  Similarity=0.191  Sum_probs=107.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++.  ....+++++++..++++.+.+.                .  ....|||+.+++|   +|+
T Consensus        73 ~l~~l~h~~iv~~-~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H---~Dl  146 (289)
T 3og7_A           73 VLRKTRHVNILLF-MGYS--TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH---RDL  146 (289)
T ss_dssp             HHTTCCCTTBCCE-EEEE--CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCC---SCC
T ss_pred             HHHhCCCCcEEEE-Eeec--cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc---ccC
Confidence            6677888888744 3333  4556789999998888766541                0  1234777766554   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.+||+|||++........ .......++.. |+|||++.... ...++.++|+||+|+++|+|++|..|
T Consensus       147 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~-~~~~~~~~Di~slG~il~el~~g~~p  224 (289)
T 3og7_A          147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQD-SNPYSFQSDVYAFGIVLYELMTGQLP  224 (289)
T ss_dssp             CGGGEEEETTTEEEECCCC------------------CCCT-TCCHHHHC-----CCSCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccceEEECCCCCEEEccceeccccccccccccccccCCCcc-ccCchhhcccC-CCCCCcccchHHHHHHHHHHHHCCCC
Confidence            69999999999999999999876443211 11122567888 99999987211 15678899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCC-CCC--CCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPP-RLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~-~~~--~~~~s~~~~~~i~~  181 (182)
                      |.+..........+..+..+ .++  ...+|+++++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  264 (289)
T 3og7_A          225 YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE  264 (289)
T ss_dssp             TSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHH
T ss_pred             ccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHH
Confidence            98844443333334343322 221  23678889888753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.92  E-value=7.1e-25  Score=165.01  Aligned_cols=164  Identities=19%  Similarity=0.155  Sum_probs=112.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++...  ...+.++++...+++.+.+..                  ....|||+.++   .|+|+
T Consensus        70 ~l~~l~h~~iv~~-~~~~~~--~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vH~Di  143 (327)
T 3poz_A           70 VMASVDNPHVCRL-LGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDL  143 (327)
T ss_dssp             HHHHCCBTTBCCE-EEEEES--SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSCC
T ss_pred             HHHhCCCCCEeEE-EEEEec--CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe---eCCCC
Confidence            6777888877644 444442  236678888877777664321                  11347777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ||+||+++.++.+||+|||+++........ ......++.. |+|||.+.+    ..++.++|+||+||++|+|++ |..
T Consensus       144 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g~~  218 (327)
T 3poz_A          144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILH----RIYTHQSDVWSYGVTVWELMTFGSK  218 (327)
T ss_dssp             CGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ChheEEECCCCCEEEccCcceeEccCCcccccccCCCcccc-ccChHHhcc----CCCCchhhhhhhHHHHHHHHhcCCC
Confidence            699999999999999999998654332211 1111344556 999999987    788999999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ ....+....+..+...+. +..++.++.+++.
T Consensus       219 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  253 (327)
T 3poz_A          219 PYDG-IPASEISSILEKGERLPQ-PPICTIDVYMIMV  253 (327)
T ss_dssp             TTTT-CCGGGHHHHHHTTCCCCC-CTTBCHHHHHHHH
T ss_pred             CccC-CCHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            9988 344344444445554444 4567888888765

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.92  E-value=5.3e-24  Score=157.28  Aligned_cols=165  Identities=15%  Similarity=0.225  Sum_probs=110.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..++++.+.+..                     ....|||+.+++|  
T Consensus        72 ~~l~~l~hp~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH--  147 (285)
T 3is5_A           72 EVLKSLDHPNIIK-IFEVFE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH--  147 (285)
T ss_dssp             HHHHTCCCTTBCC-EEEEEE-CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC--
T ss_pred             HHHHhCCCchHHh-HHHhee-cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEE--
Confidence            3677788877764 444444 55678899999988877664311                     1134777766555  


Q ss_pred             ccCCCCCcEEE---cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHH
Q psy17162         62 TRYFSVDTFHQ---RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        62 ~~~lk~~nil~---~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l  138 (182)
                       +|+||+||++   +.++.+||+|||++........  .....+++. |+|||++..     .++.++|+||+|+++|+|
T Consensus       148 -~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~-----~~~~~~Di~slG~il~~l  218 (285)
T 3is5_A          148 -KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTAL-YMAPEVFKR-----DVTFKCDIWSAGVVMYFL  218 (285)
T ss_dssp             -CCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGG-GCCHHHHTT-----CCCHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHEEEecCCCCCCEEEEeeecceecCCccc--CcCcccccC-cCChHHhcc-----CCCcccCeehHHHHHHHH
Confidence             5555999999   4457899999999976554332  233567788 999998864     578999999999999999


Q ss_pred             HhCCCCCCCCCCcHHHHHHHhhCCCC-CCCCCCCCHHHHHHhhh
Q psy17162        139 ATGRFPYDTWGSPFEQLKQVVQDDPP-RLPPGEFSSDFKDFITL  181 (182)
Q Consensus       139 ~~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~~i~~  181 (182)
                      ++|..||.+ ....+....+....+. ......+++++++++++
T Consensus       219 l~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  261 (285)
T 3is5_A          219 LTGCLPFTG-TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQ  261 (285)
T ss_dssp             HHSSCSSCC-SSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHH
T ss_pred             HhCCCCCCC-CCHHHHHhhhccCCcccccccCcCCHHHHHHHHH
Confidence            999999988 3444444444333322 22123578888888763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.92  E-value=3.5e-24  Score=157.38  Aligned_cols=164  Identities=15%  Similarity=0.208  Sum_probs=118.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.+... +...+++++|+..++++.+.+..                 ....+||+.+++|   +|+
T Consensus        58 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H---~dl  132 (277)
T 3f3z_A           58 EIMKSLDHPNIIR-LYETFE-DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH---RDL  132 (277)
T ss_dssp             HHHHTCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC---CCC
T ss_pred             HHHHhCCCCCEee-EEEEEe-cCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccC---CCC
Confidence            3667788877764 444444 56678899999988887664311                 1234777776555   555


Q ss_pred             CCCcEEE---cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQ---RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~---~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||++   +.++.++|+|||.+........  .....+++. |+|||++.+     .++.++|+||+|+++|+|++|.
T Consensus       133 kp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~t~~-y~aPE~~~~-----~~~~~~Di~slG~~l~~l~~g~  204 (277)
T 3f3z_A          133 KPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPY-YVSPQVLEG-----LYGPECDEWSAGVMMYVLLCGY  204 (277)
T ss_dssp             SGGGEEESSSSTTCCEEECCCTTCEECCTTSC--BCCCCSCTT-TCCHHHHTT-----CBCTTHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEEecCCCCCcEEEEecccceeccCccc--hhccCCCCC-ccChHHhcc-----cCCchhhehhHHHHHHHHHHCC
Confidence            5999999   7788999999999876544332  233567888 999999865     4789999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+..+. ..++.   ..+|+++++++++
T Consensus       205 ~p~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~  244 (277)
T 3f3z_A          205 PPFSA-PTDSEVMLKIREGT-FTFPEKDWLNVSPQAESLIRR  244 (277)
T ss_dssp             CSSCC-SSHHHHHHHHHHCC-CCCCHHHHTTSCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhCC-CCCCchhhhcCCHHHHHHHHH
Confidence            99988 45556666665554 33332   2678899988763

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.92  E-value=2.7e-24  Score=166.17  Aligned_cols=135  Identities=13%  Similarity=0.103  Sum_probs=93.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH----------------------------HHHHHHHHHhh
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE----------------------------LETLRCIYIQD   54 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------l~~~~~~~l~~   54 (182)
                      .+++.++|+|++.....+...+...+++++++..+ ++.+.                            +.++  .|||+
T Consensus        70 ~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al--~~LH~  146 (405)
T 3rgf_A           70 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI--HYLHA  146 (405)
T ss_dssp             HHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH--HHHHH
T ss_pred             HHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH--HHHHh
Confidence            46788899888755555544567788999999775 33322                            2223  47777


Q ss_pred             cchhcccccCCCCCcEEE----cCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         55 YHLCVRSTRYFSVDTFHQ----RLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        55 ~~~~h~~~~~lk~~nil~----~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .+++|   +||||+||++    +.++.+||+|||++........  ......+|++. |+|||++.+   ...++.++||
T Consensus       147 ~~ivH---~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~---~~~~~~~~Di  219 (405)
T 3rgf_A          147 NWVLH---RDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW-YRAPELLLG---ARHYTKAIDI  219 (405)
T ss_dssp             TTCCC---CCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCT-TCCHHHHTT---CCSCCHHHHH
T ss_pred             CCEeC---CCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCc-ccCchhhcC---CCcccchhhh
Confidence            76554   5555999999    6678999999999977643321  11223577888 999999876   1347899999


Q ss_pred             HHHHHHHHHHHhCCCCCCC
Q psy17162        129 WSLGISLIELATGRFPYDT  147 (182)
Q Consensus       129 wslg~~l~~l~~g~~pf~~  147 (182)
                      ||+||++|+|++|.+||.+
T Consensus       220 wSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          220 WAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             HHHHHHHHHHHHSSCTTCC
T ss_pred             HHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999976

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=3.6e-24  Score=162.28  Aligned_cols=143  Identities=17%  Similarity=0.138  Sum_probs=103.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++.. .+... +...+++++|+... ++.+.                    +.++  .|||+.+++|   +
T Consensus        65 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~ivH---~  136 (346)
T 1ua2_A           65 LLQELSHPNIIGL-LDAFG-HKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGL--EYLHQHWILH---R  136 (346)
T ss_dssp             HHHHCCCTTBCCE-EEEEC-CTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHH--HHHHHTTCCC---C
T ss_pred             HHhhCCCCCCCeE-EEEEe-eCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHH--HHHHHCCEEC---C
Confidence            6777888877644 34443 45667888888765 44432                    2233  4777776554   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||++......... ....++++. |+|||++.+   ...++.++|+||+||++|+|++|.+
T Consensus       137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~ell~g~~  211 (346)
T 1ua2_A          137 DLKPNNLLLDENGVLKLADFGLAKSFGSPNRA-YTHQVVTRW-YRAPELLFG---ARMYGVGVDMWAVGCILAELLLRVP  211 (346)
T ss_dssp             CCCGGGEEECTTCCEEECCCGGGSTTTSCCCC-CCCSCCCCT-TCCHHHHTT---CSCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCHHHEEEcCCCCEEEEecccceeccCCccc-CCccccccc-ccCchHhhC---CCCCCchhhhHhHHHHHHHHHHCCC
Confidence            55599999999999999999999776433221 223577888 999999875   1357889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~  160 (182)
                      ||.+ ....+.+..+..
T Consensus       212 ~~~~-~~~~~~~~~i~~  227 (346)
T 1ua2_A          212 FLPG-DSDLDQLTRIFE  227 (346)
T ss_dssp             SSCC-SSHHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHH
Confidence            9988 456566666543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.92  E-value=1.9e-24  Score=160.40  Aligned_cols=166  Identities=16%  Similarity=0.208  Sum_probs=117.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++...++...++++++..++++.+.+..                  ....+||+.+++   |+|+
T Consensus        79 ~l~~l~h~~iv~-~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~---H~di  154 (298)
T 3f66_A           79 IMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV---HRDL  154 (298)
T ss_dssp             HHHTCCCTTBCC-CCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHhCCCCCEee-eeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCcc---CCCC
Confidence            677788877764 444444456678899999988888765411                  113477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      ||+||+++.++.+||+|||.+.........   ......+++. |+|||.+.+    ..++.++|+||+|+++|+|++ |
T Consensus       155 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~~~  229 (298)
T 3f66_A          155 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK-WMALESLQT----QKFTTKSDVWSFGVLLWELMTRG  229 (298)
T ss_dssp             SGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             chheEEECCCCCEEECcccccccccccchhccccccCCCCCcc-ccChHHhcC----CCCChHHHHHHHHHHHHHHHhCC
Confidence            699999999999999999999776543321   1122345556 999999987    678899999999999999999 6


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .+||.+ ....+....+..+..+.. +..+|+.++++++
T Consensus       230 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  266 (298)
T 3f66_A          230 APPYPD-VNTFDITVYLLQGRRLLQ-PEYCPDPLYEVML  266 (298)
T ss_dssp             CCSSTT-SCTTTHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCcc-CCHHHHHHHHhcCCCCCC-CccCCHHHHHHHH
Confidence            778876 344455555556654444 5668898988875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.92  E-value=2.1e-24  Score=161.20  Aligned_cols=168  Identities=16%  Similarity=0.203  Sum_probs=111.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCC---CceEEEeccCccchHHHHHH---------------------H--HHHHHHhhcch
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDD---KKVVLVTGKGEAEKVQKELE---------------------T--LRCIYIQDYHL   57 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~---------------------~--~~~~~l~~~~~   57 (182)
                      +++.++|+|++..+......+.   ...++++++...+++.+.+.                     .  .+..|||+.++
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (313)
T 3brb_A           89 CMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF  168 (313)
T ss_dssp             HHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5677888887654443333222   24578999988777765441                     0  12347777655


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                         .|+|+||+||+++.++.+||+|||++......... ......++.. |+|||.+..    ..++.++|+||+|+++|
T Consensus       169 ---vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~  240 (313)
T 3brb_A          169 ---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK-WIAIESLAD----RVYTSKSDVWAFGVTMW  240 (313)
T ss_dssp             ---CCCCCSGGGEEECTTSCEEECSCSCC----------------CCGG-GSCHHHHHS----SCCCHHHHHHHHHHHHH
T ss_pred             ---ccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCcc-ccCchhhcC----CCccchhhhHHHHHHHH
Confidence               45556699999999999999999998765433211 1121344556 999999987    78899999999999999


Q ss_pred             HHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        137 ELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       137 ~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|++ |..||.+ ....+....+..+..+.. +..+++++.+++.+
T Consensus       241 el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  284 (313)
T 3brb_A          241 EIATRGMTPYPG-VQNHEMYDYLLHGHRLKQ-PEDCLDELYEIMYS  284 (313)
T ss_dssp             HHHTTSCCSSTT-CCGGGHHHHHHTTCCCCC-BTTCCHHHHHHHHH
T ss_pred             HHHhcCCCCCcc-CCHHHHHHHHHcCCCCCC-CccccHHHHHHHHH
Confidence            9999 8999988 345455556666665555 55688999988763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=1.5e-24  Score=166.12  Aligned_cols=165  Identities=22%  Similarity=0.234  Sum_probs=107.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.+..                  ....|||+.+++   |+|+
T Consensus        99 ~l~~l~h~niv~-~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---H~Dl  173 (373)
T 2qol_A           99 IMGQFDHPNIIR-LEGVVT-KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV---HRDL  173 (373)
T ss_dssp             HHTTCCCTTBCC-EEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHhCCCCCCCe-EEEEEe-eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee---CCCC
Confidence            567788877764 444444 45678899999988888775421                  123477776654   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcc--cCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGL--YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||++............  ...++.. |+|||++..    ..++.++|+||+|+++|++++ |.
T Consensus       174 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~SlG~il~ellt~g~  248 (373)
T 2qol_A          174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR-WTSPEAIAY----RKFTSASDVWSYGIVLWEVMSYGE  248 (373)
T ss_dssp             CGGGEEECTTCCEEECCC----------------------CT-TSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTC-
T ss_pred             CcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCC-ccChhhhcc----CCcCchhcHHHHHHHHHHHHhCCC
Confidence            699999999999999999999776543221111  1223455 999999987    788999999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. +..+++++.+++.
T Consensus       249 ~P~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  284 (373)
T 2qol_A          249 RPYWE-MSNQDVIKAVDEGYRLPP-PMDCPAALYQLML  284 (373)
T ss_dssp             CTTTT-CCHHHHHHHHHTTEECCC-CTTCBHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CccccHHHHHHHH
Confidence            99988 355555555555544433 4567888888775

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.92  E-value=1.3e-24  Score=163.63  Aligned_cols=164  Identities=19%  Similarity=0.152  Sum_probs=109.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++...  ...+.++++...+++.+.+..                  ....|||+.+++   |+|+
T Consensus        70 ~l~~l~hp~iv~~-~~~~~~--~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---H~Di  143 (327)
T 3lzb_A           70 VMASVDNPHVCRL-LGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV---HRDL  143 (327)
T ss_dssp             HHTTCCBTTBCCC-CEEEES--SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHhCCCCCeeEE-EEEEec--CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCc---CCCC
Confidence            5677888777643 344432  236778888887777664421                  113477776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh-cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      ||+||+++.++.+||+|||++.......... .....++.. |+|||++.+    ..++.++|+||+||++|+|++ |..
T Consensus       144 kp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~~Di~slG~il~ell~~g~~  218 (327)
T 3lzb_A          144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILH----RIYTHQSDVWSYGVTVWELMTFGSK  218 (327)
T ss_dssp             CGGGEEEEETTEEEECCTTC----------------CCCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CHHHEEEcCCCCEEEccCcceeEccCccccccccCCCcccc-ccCHHHHcC----CCCChHHHHHHHHHHHHHHHHCCCC
Confidence            6999999999999999999997754432211 111334556 999999987    788999999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ ....+....+..+..++. +..++.++.++++
T Consensus       219 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  253 (327)
T 3lzb_A          219 PYDG-IPASEISSILEKGERLPQ-PPICTIDVYMIMR  253 (327)
T ss_dssp             TTTT-CCGGGHHHHHHTTCCCCC-CTTBCHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            9988 344444444555554544 4568888988875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.92  E-value=1e-24  Score=163.44  Aligned_cols=155  Identities=15%  Similarity=0.254  Sum_probs=108.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++..+......+...+++++|+..++++.+.+..                    ....|||+.+++   |
T Consensus        59 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv---H  135 (319)
T 4euu_A           59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV---H  135 (319)
T ss_dssp             HHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEE---C
T ss_pred             HHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEe---c
Confidence            36788888888755544444455578899999988877665421                    113477777654   5


Q ss_pred             cCCCCCcEEE----cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCC----CCCCCCCccchHHHHHHH
Q psy17162         63 RYFSVDTFHQ----RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPS----GNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        63 ~~lk~~nil~----~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~----~~~~~~~~~~Diwslg~~  134 (182)
                      +|+||+||++    +.++.+||+|||++........  .....++.. |+|||++...    .....++.++|+||+||+
T Consensus       136 ~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i  212 (319)
T 4euu_A          136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEE-YLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (319)
T ss_dssp             SCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC--BCCCCSCGG-GCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred             CCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc--eeecccCCC-ccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence            5566999998    7778899999999977654432  233567888 9999987510    001567899999999999


Q ss_pred             HHHHHhCCCCCCCC---CCcHHHHHHHhhCCC
Q psy17162        135 LIELATGRFPYDTW---GSPFEQLKQVVQDDP  163 (182)
Q Consensus       135 l~~l~~g~~pf~~~---~~~~~~~~~i~~~~~  163 (182)
                      +|+|++|..||...   ....+.+..+..+.+
T Consensus       213 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (319)
T ss_dssp             HHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred             HHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence            99999999999642   223455555555543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.92  E-value=7.2e-25  Score=166.09  Aligned_cols=168  Identities=15%  Similarity=0.064  Sum_probs=111.4

Q ss_pred             HHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHH---------------H--HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELE---------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~---------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++..+.....  .+...+++++|+. ++++.+.+.               .  .++.|||+.+++   |+|
T Consensus       101 ~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---H~D  176 (345)
T 2v62_A          101 ERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYV---HGD  176 (345)
T ss_dssp             HHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEE---CSC
T ss_pred             hhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee---CCC
Confidence            3455678887654443332  2356788999998 777766421               0  123478777655   455


Q ss_pred             CCCCcEEEcCCC--eEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQF--LLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        65 lk~~nil~~~~~--~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~  136 (182)
                      +||+||+++.++  .+||+|||+++........      ......|+.. |+|||++.+    ..++.++|+||+||++|
T Consensus       177 lkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~  251 (345)
T 2v62_A          177 IKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIE-FTSLDAHKG----VALSRRSDVEILGYCML  251 (345)
T ss_dssp             CSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTT-TCCHHHHHT----CCCCHHHHHHHHHHHHH
T ss_pred             cCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCcc-ccCHHHhcC----CCCCchhhHHHHHHHHH
Confidence            559999998877  9999999999765433210      0122567888 999999988    67899999999999999


Q ss_pred             HHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC--------CCCCCHHHHHHhh
Q psy17162        137 ELATGRFPYDTWGSPFEQLKQVVQDDPPRLP--------PGEFSSDFKDFIT  180 (182)
Q Consensus       137 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~--------~~~~s~~~~~~i~  180 (182)
                      +|++|..||.+................+.++        +..+|++++++++
T Consensus       252 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  303 (345)
T 2v62_A          252 RWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLV  303 (345)
T ss_dssp             HHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHH
T ss_pred             HHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHH
Confidence            9999999996522332322222222111121        1267888888775

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.92  E-value=1.3e-24  Score=163.74  Aligned_cols=167  Identities=17%  Similarity=0.127  Sum_probs=115.7

Q ss_pred             hHHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-------------------------------HHH
Q psy17162          3 SIRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-------------------------------RCI   50 (182)
Q Consensus         3 ~il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------------------------------~~~   50 (182)
                      .+++.+ +|+|++ .+.+... +...+++++|+..++++.+.+...                               ...
T Consensus       101 ~~l~~l~~h~~iv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~  178 (333)
T 2i1m_A          101 KIMSHLGQHENIV-NLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMA  178 (333)
T ss_dssp             HHHHHHCCCTTBC-CEEEEEC-SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCee-eEEEEEe-cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence            356777 566665 4555554 456788999999888877654321                               124


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |||+.++   .|+|+||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..++.++|+|
T Consensus       179 ~lH~~~i---vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~  250 (333)
T 2i1m_A          179 FLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFD----CVYTVQSDVW  250 (333)
T ss_dssp             HHHHTTE---ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGG-GSCHHHHHH----CCCCHHHHHH
T ss_pred             HHhcCCc---ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCcc-ccCHHHhcc----CCCChHHHHH
Confidence            6776654   55556699999999999999999999765432211 0111334556 999999987    6788999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|+++|+|++ |..||.+..........+..+..+.. +...|+++.++++
T Consensus       251 slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  301 (333)
T 2i1m_A          251 SYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQ  301 (333)
T ss_dssp             HHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Confidence            99999999998 99999884444333333334444434 5567888888875

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.91  E-value=2.8e-24  Score=161.55  Aligned_cols=145  Identities=17%  Similarity=0.182  Sum_probs=98.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++.. +...+++++|+..+ ++.+.+.                .  .+..|||+.+++   |+|+
T Consensus        53 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv---H~Di  126 (324)
T 3mtl_A           53 LLKDLKHANIVT-LHDIIH-TEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL---HRDL  126 (324)
T ss_dssp             HHSCCCCTTBCC-EEEEEE-CSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE---ESSC
T ss_pred             HHHhcCCCCCCe-eeeEEe-eCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc---CCCc
Confidence            567778877764 445544 45668899999874 4444321                0  113477777655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||++......... .....++.. |+|||++.+   ...++.++|+||+||++|+|++|..||
T Consensus       127 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~l~~g~~pf  201 (324)
T 3mtl_A          127 KPQNLLINERGELKLADFGLARAKSIPTKT-YDNEVVTLW-YRPPDILLG---STDYSTQIDMWGVGCIFYEMATGRPLF  201 (324)
T ss_dssp             CGGGEEECTTCCEEECSSSEEECC-------------CGG-GCCHHHHTT---CCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CHHHEEECCCCCEEEccCcccccccCCccc-cccccCccc-ccChhhhcC---CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999998765433221 122567778 999999875   145789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhh
Q psy17162        146 DTWGSPFEQLKQVVQ  160 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~  160 (182)
                      .+ ....+.+..+..
T Consensus       202 ~~-~~~~~~~~~i~~  215 (324)
T 3mtl_A          202 PG-STVEEQLHFIFR  215 (324)
T ss_dssp             CC-SSHHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHH
Confidence            98 455565555543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.91  E-value=9.4e-25  Score=161.88  Aligned_cols=170  Identities=15%  Similarity=0.132  Sum_probs=112.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++..+..+...+...+++++|+..++++.+.+..                  ....|||+.+++   |+|
T Consensus        63 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv---H~D  139 (295)
T 3ugc_A           63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRD  139 (295)
T ss_dssp             HHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCC---CSC
T ss_pred             HHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcc---cCC
Confidence            36777888888755444444445668899999988888775421                  123477776555   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.+||+|||++.........  ......++.. |+|||.+..    ..++.++|+||+|+++|+|++|.
T Consensus       140 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~~l~~l~~g~  214 (295)
T 3ugc_A          140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF-WYAPESLTE----SKFSVASDVWSFGVVLYELFTYI  214 (295)
T ss_dssp             CSGGGEEEEETTEEEECCCCSCC-------------CTTCGGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccc-eeCcHHhcC----CCCChHHHHHHHHHHHHHHHhcc
Confidence            6699999999999999999999776443221  1121334555 999999987    77899999999999999999999


Q ss_pred             CCCCCCCC-----------c----HHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGS-----------P----FEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~-----------~----~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .|+.....           .    ......+..+..++. +..+|+++.+++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  267 (295)
T 3ugc_A          215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-PDGCPDEIYMIMTE  267 (295)
T ss_dssp             CTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             cccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCC-CcCcCHHHHHHHHH
Confidence            99864100           0    011222233444444 56789999988753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=1.3e-24  Score=160.88  Aligned_cols=165  Identities=18%  Similarity=0.234  Sum_probs=117.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++..+ ++.  ....+++++++..++++.+.+..                 ....+||+.+++   |+|+|
T Consensus        71 ~l~~l~h~~i~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~---H~dik  144 (291)
T 1xbb_A           71 VMQQLDNPYIVRMI-GIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV---HRDLA  144 (291)
T ss_dssp             HHHTCCCTTBCCEE-EEE--ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCCS
T ss_pred             HHHhCCCCCEEEEE-EEE--CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeE---cCCCC
Confidence            56778887776444 444  34567899999988887765421                 113477776554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      |+||+++.++.+||+|||++.........  ......++.. |+|||.+..    ..++.++|+||+|+++|+|++ |..
T Consensus       145 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~~g~~  219 (291)
T 1xbb_A          145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK-WYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQK  219 (291)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCce-eeChHHhcc----CCCChhhhHHHHHHHHHHHHhcCCC
Confidence            99999999999999999998765433211  0111334566 999999987    678899999999999999999 999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+....+..+..+.+ +..+|+++++++++
T Consensus       220 p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  255 (291)
T 1xbb_A          220 PYRG-MKGSEVTAMLEKGERMGC-PAGCPREMYDLMNL  255 (291)
T ss_dssp             SSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHH
Confidence            9988 455555555666665555 45689999988763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=5.4e-24  Score=157.78  Aligned_cols=167  Identities=14%  Similarity=0.162  Sum_probs=116.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++....+...++++++...+++.+.+..                  ....|||+.+++   |+|+
T Consensus        75 ~l~~l~h~~iv~-~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~---H~di  150 (298)
T 3pls_A           75 LMRGLNHPNVLA-LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV---HRDL  150 (298)
T ss_dssp             HHHTCCCTTBCC-CCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHhCCCCCeee-EEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc---cCCC
Confidence            567788877764 444444455555788899888777765421                  113477777655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC-
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG-  141 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g-  141 (182)
                      ||+||+++.++.+||+|||++.........   ......++.. |+|||.+.+    ..++.++|+||+|+++|+|++| 
T Consensus       151 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~  225 (298)
T 3pls_A          151 AARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK-WTALESLQT----YRFTTKSDVWSFGVLLWELLTRG  225 (298)
T ss_dssp             SGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGG-GSCHHHHTT----CCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             CcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCcc-ccChhhhcc----CCCChhhchhhHHHHHHHHhhCC
Confidence            699999999999999999999765443221   0112345556 999999987    7888999999999999999995 


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+||.. ....+....+..+..++. +..+|+.+++++++
T Consensus       226 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  263 (298)
T 3pls_A          226 APPYRH-IDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQ  263 (298)
T ss_dssp             CCTTTT-SCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCcc-CCHHHHHHHhhcCCCCCC-CccchHHHHHHHHH
Confidence            555655 455555555555554444 56688999888753

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.91  E-value=1.5e-24  Score=160.16  Aligned_cols=167  Identities=16%  Similarity=0.171  Sum_probs=118.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++.. +...+++++++..++++.+.+..                   ....+||+.++   .|+
T Consensus        61 ~~l~~l~h~~i~~~-~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~  135 (288)
T 3kfa_A           61 AVMKEIKHPNLVQL-LGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHR  135 (288)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC-SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTC---CCS
T ss_pred             HHHHhCCCCCEeeE-EEEEc-cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCc---cCC
Confidence            36778888777644 44444 45668899999988887765421                   01246666654   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.++|+|||.+...............++.. |+|||.+..    ..++.++|+||+|+++|+|++ |.
T Consensus       136 dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~ll~~g~  210 (288)
T 3kfa_A          136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAY----NKFSIKSDVWAFGVLLWEIATYGM  210 (288)
T ss_dssp             CCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccC-cCChhhhcc----CCCCchhhHHHHHHHHHHHHhCCC
Confidence            566999999999999999999987654332211122334556 999999987    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+ .........+..+..+.. +..+|++++++++.
T Consensus       211 ~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  247 (288)
T 3kfa_A          211 SPYPG-IDLSQVYELLEKDYRMER-PEGCPEKVYELMRA  247 (288)
T ss_dssp             CSSTT-CCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHhccCCCCC-CCCCCHHHHHHHHH
Confidence            99987 344344444445544444 56789999988763

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.91  E-value=4.6e-25  Score=164.67  Aligned_cols=134  Identities=16%  Similarity=0.163  Sum_probs=99.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++.. +...+++++|+..++++.+.+..                  ....|||+.++   .|+|+
T Consensus        60 ~l~~l~hp~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~dl  134 (310)
T 3s95_A           60 VMRCLEHPNVLKF-IGVLY-KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI---IHRDL  134 (310)
T ss_dssp             HHTTCCCTTBCCE-EEEEE-ETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHhCCCcCcccE-EEEEe-cCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCC
Confidence            5677888777644 44444 45678899999998888775432                  12347777665   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh-------------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR-------------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~-------------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      ||+||+++.++.+||+|||.+..........             ....+|++. |+|||++.+    ..++.++||||+|
T Consensus       135 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG  209 (310)
T 3s95_A          135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY-WMAPEMING----RSYDEKVDVFSFG  209 (310)
T ss_dssp             STTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGG-GCCHHHHTT----CCCCTHHHHHHHH
T ss_pred             CcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcc-eeCHHHhcC----CCCCcHHHHHHHH
Confidence            6999999999999999999997654332210             113578888 999999988    7889999999999


Q ss_pred             HHHHHHHhCCCCCCC
Q psy17162        133 ISLIELATGRFPYDT  147 (182)
Q Consensus       133 ~~l~~l~~g~~pf~~  147 (182)
                      +++|+|++|..||..
T Consensus       210 ~~l~el~~g~~~~~~  224 (310)
T 3s95_A          210 IVLCEIIGRVNADPD  224 (310)
T ss_dssp             HHHHHHHHTCCSSTT
T ss_pred             HHHHHHhcCCCCCcc
Confidence            999999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.3e-24  Score=164.68  Aligned_cols=141  Identities=20%  Similarity=0.232  Sum_probs=102.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC-----CCceEEEeccCccchHHHHH------------------HHHHHHHHhhcchhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD-----DKKVVLVTGKGEAEKVQKEL------------------ETLRCIYIQDYHLCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l------------------~~~~~~~l~~~~~~h   59 (182)
                      .+++.++|+|++..+ ++....     ...+++++++. .+++.+.+                  .++  .|||+.+++ 
T Consensus        76 ~~l~~l~hpnIv~l~-~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L--~~LH~~~iv-  150 (367)
T 1cm8_A           76 RLLKHMRHENVIGLL-DVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGL--RYIHAAGII-  150 (367)
T ss_dssp             HHHHHCCBTTBCCCS-EEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHH--HHHHHTTEE-
T ss_pred             HHHHhCCCcCCCCce-eeEecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCcc-
Confidence            367788888876443 333322     24568999987 55655532                  223  377777655 


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                        |+|+||+||+++.++.+||+|||+++.....    .+..+++.. |+|||++.+   ...++.++|+||+||++|+|+
T Consensus       151 --H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~ell  220 (367)
T 1cm8_A          151 --HRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRW-YRAPEVILN---WMRYTQTVDIWSVGCIMAEMI  220 (367)
T ss_dssp             --CCCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGG-GCCTHHHHT---TTCCCTTHHHHHHHHHHHHHH
T ss_pred             --ccCcCHHHEEEcCCCCEEEEeeecccccccc----cCcCcCCCC-cCCHHHHhC---CCCCChhhhHHHHHHHHHHHH
Confidence              5555699999999999999999999765432    233677888 999998875   146789999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~  159 (182)
                      +|++||.+ ....+++..+.
T Consensus       221 ~g~~pf~~-~~~~~~l~~i~  239 (367)
T 1cm8_A          221 TGKTLFKG-SDHLDQLKEIM  239 (367)
T ss_dssp             HSSCSSCC-SSHHHHHHHHH
T ss_pred             hCCCCCCC-CCHHHHHHHHH
Confidence            99999998 45556665554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=3.1e-24  Score=161.86  Aligned_cols=165  Identities=16%  Similarity=0.233  Sum_probs=117.4

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~   49 (182)
                      +++.+ +|+|++ .+.+... +...+++++|+..++++.+.+..                                 ...
T Consensus        93 ~l~~l~~hp~iv-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  170 (334)
T 2pvf_A           93 MMKMIGKHKNII-NLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  170 (334)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCEe-eEEEEEc-cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            56667 666655 4455544 45678899999888777665421                                 113


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .|+|+||+||+++.++.+||+|||++......... ......++.. |+|||++..    ..++.++|+
T Consensus       171 ~~LH~~~i---vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di  242 (334)
T 2pvf_A          171 EYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFD----RVYTHQSDV  242 (334)
T ss_dssp             HHHHHTTE---ECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGG-GCCHHHHHH----CEECHHHHH
T ss_pred             HHHHhCCe---eCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccc-eeChHHhcC----CCcChHHHH
Confidence            47777655   45556699999999999999999998765433211 0122345566 999999987    678899999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||+|+++|+|++ |..||.+ ....+....+..+..+.. +..++++++++++
T Consensus       243 ~slG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  293 (334)
T 2pvf_A          243 WSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDK-PANCTNELYMMMR  293 (334)
T ss_dssp             HHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcCc-CCHHHHHHHHhcCCCCCC-CccCCHHHHHHHH
Confidence            999999999999 9999988 455455555556655555 5568899988875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.91  E-value=3.5e-24  Score=157.46  Aligned_cols=164  Identities=23%  Similarity=0.270  Sum_probs=94.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++.. +...+++++|+...+++.+.+..                  ....|||+.++   .|+|+
T Consensus        64 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl  138 (278)
T 3cok_A           64 IHCQLKHPSILEL-YNYFE-DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI---LHRDL  138 (278)
T ss_dssp             HHTTBCCTTBCCE-EEEEE-CSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECSSC
T ss_pred             HHHhCCCCCeEeE-EEEEc-cCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCC
Confidence            5566778777644 44444 45678899999888777664321                  11347777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||.+......... .....+++. |+|||.+..    ..++.++|+||+|+++|+|++|..||
T Consensus       139 ~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~  212 (278)
T 3cok_A          139 TLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYTLCGTPN-YISPEIATR----SAHGLESDVWSLGCMFYTLLIGRPPF  212 (278)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECC----------------------------------CTHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHEEEcCCCCEEEEeecceeeccCCCCc-ceeccCCCC-cCCcchhcC----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999998765433221 122567777 999999987    67889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ... ...+....+.... ..+ |..+|+++++++++
T Consensus       213 ~~~-~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~  245 (278)
T 3cok_A          213 DTD-TVKNTLNKVVLAD-YEM-PSFLSIEAKDLIHQ  245 (278)
T ss_dssp             CCC-SCC-----CCSSC-CCC-CTTSCHHHHHHHHH
T ss_pred             CCh-hHHHHHHHHhhcc-cCC-ccccCHHHHHHHHH
Confidence            873 3323343333322 233 45688899988764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=7.5e-24  Score=159.82  Aligned_cols=165  Identities=22%  Similarity=0.236  Sum_probs=113.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++.. +...+++++|+..++++.+.+..                  ....+||+.++   .|+|+
T Consensus        99 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~Di  173 (333)
T 1mqb_A           99 IMGQFSHHNIIRL-EGVIS-KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY---VHRDL  173 (333)
T ss_dssp             HHHTCCCTTBCCE-EEEEC-SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSCC
T ss_pred             HHHhCCCCCCCcE-EEEEe-cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCC
Confidence            5677888777644 44444 45678899999988888775421                  11347777655   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||++..........  .....++.. |+|||++..    ..++.++|+||+|+++|+|++ |.
T Consensus       174 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-WTAPEAISY----RKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             CGGGEEECTTCCEEECCCCC-----------------CCCGG-GSCHHHHHS----CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ChheEEECCCCcEEECCCCcchhhccccccccccCCCCcccc-ccCchhccc----CCCCchhhhHHHHHHHHHHHcCCC
Confidence            6999999999999999999997754432211  111234556 999999987    778899999999999999998 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||.+ ....+....+..+..++. +..++++++++++
T Consensus       249 ~pf~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  284 (333)
T 1mqb_A          249 RPYWE-LSNHEVMKAINDGFRLPT-PMDCPSAIYQLMM  284 (333)
T ss_dssp             CTTTT-CCHHHHHHHHHTTCCCCC-CTTCBHHHHHHHH
T ss_pred             CCccc-CCHHHHHHHHHCCCcCCC-cccCCHHHHHHHH
Confidence            99987 455555666666655544 4568888888775

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.91  E-value=2.7e-24  Score=159.17  Aligned_cols=135  Identities=16%  Similarity=0.138  Sum_probs=101.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.+++++..+..+.. +....++++++. .+++.+.+..                  ....|||+.+++   |+|
T Consensus        56 ~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv---H~D  130 (296)
T 4hgt_A           56 KIYKMMQGGVGIPTIRWCGA-EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI---HRD  130 (296)
T ss_dssp             HHHHHHTTSTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE---CSC
T ss_pred             HHHHHhcCCCCCCeeeeecC-CCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee---cCC
Confidence            46788889888877766655 566778999998 6776664321                  123477777654   555


Q ss_pred             CCCCcEEE---cCCCeEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         65 FSVDTFHQ---RLQFLLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        65 lk~~nil~---~~~~~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      +||+||++   +.++.+||+|||++.........      ......++.. |+|||++.+    ..++.++|+||+||++
T Consensus       131 lkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il  205 (296)
T 4hgt_A          131 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR-YASINTHLG----IEQSRRDDLESLGYVL  205 (296)
T ss_dssp             CSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGG-GCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred             CCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCcc-ccchHHhcC----CCCCchhHHHHHHHHH
Confidence            66999999   78899999999999765443220      1122567778 999999988    7788999999999999


Q ss_pred             HHHHhCCCCCCC
Q psy17162        136 IELATGRFPYDT  147 (182)
Q Consensus       136 ~~l~~g~~pf~~  147 (182)
                      |+|++|..||.+
T Consensus       206 ~~l~~g~~pf~~  217 (296)
T 4hgt_A          206 MYFNLGSLPWQG  217 (296)
T ss_dssp             HHHHHSSCTTSS
T ss_pred             HHHhcCCCCCcc
Confidence            999999999976

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.91  E-value=1.3e-23  Score=156.68  Aligned_cols=167  Identities=17%  Similarity=0.260  Sum_probs=108.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++..+ +... +...+++++++...+++.+.+..                     ....+||+.+++   |
T Consensus        85 ~l~~l~h~~i~~~~-~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~---H  159 (310)
T 2wqm_A           85 LLKQLNHPNVIKYY-ASFI-EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM---H  159 (310)
T ss_dssp             HHHTCCCTTBCCEE-EEEE-ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC---C
T ss_pred             HHHhCCCCCEeeEE-EEEE-cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCee---C
Confidence            56777888876544 3333 35578899999888777664421                     013477776655   5


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||++......... .....++.. |+|||++..    ..++.++|+||+|+++|+|++|.
T Consensus       160 ~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~----~~~~~~~Dv~slG~il~~l~~g~  233 (310)
T 2wqm_A          160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPY-YMSPERIHE----NGYNFKSDIWSLGCLLYEMAALQ  233 (310)
T ss_dssp             CCCCGGGEEECTTSCEEECCC-------------------CCS-SCCHHHHTT----CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCcHHHEEEcCCCCEEEEeccceeeecCCCcc-ccccCCCee-EeChHHhCC----CCCCchhhHHHHHHHHHHHHhCC
Confidence            556699999999999999999998765443221 122467777 999999987    77889999999999999999999


Q ss_pred             CCCCCCCCc-HHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSP-FEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+.... ......+..+..+++++..+|+++++++++
T Consensus       234 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  273 (310)
T 2wqm_A          234 SPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM  273 (310)
T ss_dssp             CTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHH
T ss_pred             CCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHH
Confidence            999763322 233344445555555556789999998763

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.91  E-value=1.3e-23  Score=159.39  Aligned_cols=146  Identities=17%  Similarity=0.135  Sum_probs=101.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC------CCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD------DKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYH   56 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~   56 (182)
                      .+++.++|+|++..+..+....      ...+++++|+..+ ++.+.                    +.++  .|||+.+
T Consensus        68 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l--~~LH~~~  144 (351)
T 3mi9_A           68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGL--YYIHRNK  144 (351)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHH--HHHHHTT
T ss_pred             HHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHH--HHHHHCC
Confidence            3677888888875544443322      4568899999875 32221                    2333  4787776


Q ss_pred             hhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh---hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI---IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~---~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                      ++|   +|+||+||+++.++.+||+|||++........   .......+++. |+|||++.+   ...++.++|+||+||
T Consensus       145 ivH---~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~---~~~~~~~~DiwslG~  217 (351)
T 3mi9_A          145 ILH---RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW-YRPPELLLG---ERDYGPPIDLWGAGC  217 (351)
T ss_dssp             EEC---CCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGG-GCCHHHHTT---CCSCCTHHHHHHHHH
T ss_pred             eeC---CCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccC-ccCchhhcC---CCCCCcHhHHHHHHH
Confidence            555   55559999999999999999999876442111   11223567888 999999875   145789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        134 SLIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       134 ~l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      ++|+|++|.+||.+ .........+.
T Consensus       218 il~ell~g~~pf~~-~~~~~~~~~i~  242 (351)
T 3mi9_A          218 IMAEMWTRSPIMQG-NTEQHQLALIS  242 (351)
T ss_dssp             HHHHHHHSSCSCCC-SSHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCC-CChHHHHHHHH
Confidence            99999999999998 45555555543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.91  E-value=3.1e-24  Score=165.00  Aligned_cols=138  Identities=20%  Similarity=0.220  Sum_probs=99.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++.. +...+++++|+..++++.+.+..                   ....|||+.+++   |+
T Consensus        78 ~~l~~l~h~niv~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv---Hr  152 (389)
T 3gni_B           78 HVSKLFNHPNIVPY-RATFI-ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV---HR  152 (389)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE---CC
T ss_pred             HHHHhCCCCCCCcE-eEEEE-ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee---cC
Confidence            36778888887754 44444 45678999999888877665321                   123477777654   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      ||||+||+++.++.+||+|||.+.........      .....+|+.. |+|||++....  ..++.++|+||+||++|+
T Consensus       153 Dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~--~~~~~~~DiwslG~il~e  229 (389)
T 3gni_B          153 SVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPEVLQQNL--QGYDAKSDIYSVGITACE  229 (389)
T ss_dssp             CCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGG-GSCHHHHSTTS--SCBCTHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCEEEcccccceeecccccccccccccccccccccc-ccCHHHHhccC--CCCCcHhHHHHHHHHHHH
Confidence            56699999999999999999987543222110      0112467778 99999987611  357899999999999999


Q ss_pred             HHhCCCCCCCC
Q psy17162        138 LATGRFPYDTW  148 (182)
Q Consensus       138 l~~g~~pf~~~  148 (182)
                      |++|..||.+.
T Consensus       230 l~~g~~pf~~~  240 (389)
T 3gni_B          230 LANGHVPFKDM  240 (389)
T ss_dssp             HHHSSCTTTTC
T ss_pred             HHHCCCCCCCC
Confidence            99999999873

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.91  E-value=4.7e-24  Score=158.11  Aligned_cols=167  Identities=13%  Similarity=0.119  Sum_probs=111.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.+++++..+.++.. +....++++++. ++++.+.+..                  ....|||+.++   .|+|+
T Consensus        58 ~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dl  132 (298)
T 1csn_A           58 TYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL---VYRDI  132 (298)
T ss_dssp             HHHHTTTCTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCC
T ss_pred             HHHHHhcCCCCCeEEeecC-CCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCC
Confidence            5566644444445555554 566778999998 7777765431                  11246776654   45556


Q ss_pred             CCCcEEEcCCCe-----EEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         66 SVDTFHQRLQFL-----LHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        66 k~~nil~~~~~~-----~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      ||+||+++.++.     +||+|||++.........      ......|+.. |+|||++.+    ..++.++|+||+|++
T Consensus       133 kp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~i  207 (298)
T 1csn_A          133 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR-YMSINTHLG----REQSRRDDLEALGHV  207 (298)
T ss_dssp             CGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTT-TCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred             CHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcc-cCCchhhcC----CCCChHHHHHHHHHH
Confidence            699999987766     999999999765543221      1123567888 999999987    778999999999999


Q ss_pred             HHHHHhCCCCCCCCC--CcHHHHHHHhhCC-CCCCC--CCCCCHHHHHHhh
Q psy17162        135 LIELATGRFPYDTWG--SPFEQLKQVVQDD-PPRLP--PGEFSSDFKDFIT  180 (182)
Q Consensus       135 l~~l~~g~~pf~~~~--~~~~~~~~i~~~~-~~~~~--~~~~s~~~~~~i~  180 (182)
                      +|+|++|..||.+..  ........+..+. .++.+  ...+|++++++++
T Consensus       208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  258 (298)
T 1csn_A          208 FMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMH  258 (298)
T ss_dssp             HHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHH
T ss_pred             HHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHH
Confidence            999999999998732  2223333332221 11111  2357888888775

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.91  E-value=1.3e-23  Score=154.81  Aligned_cols=165  Identities=16%  Similarity=0.164  Sum_probs=115.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. +...+++++|+...+++.+.+..                 ....+||+.+++   |+|+
T Consensus        60 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~---H~dl  134 (283)
T 3bhy_A           60 NILREIRHPNIIT-LHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIA---HFDL  134 (283)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE---CSCC
T ss_pred             HHHHhCCCCCeee-hhheec-CCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc---CCCC
Confidence            3677788877764 444444 45668899999988888775421                 113477776555   5556


Q ss_pred             CCCcEEEcCCC----eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         66 SVDTFHQRLQF----LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        66 k~~nil~~~~~----~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ||+||+++.++    .+||+|||.+........  .....+++. |+|||++..    ..++.++|+||+|+++|+|++|
T Consensus       135 ~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g  207 (283)
T 3bhy_A          135 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPE-FVAPEIVNY----EPLGLEADMWSIGVITYILLSG  207 (283)
T ss_dssp             SGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGG-GCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ChHHEEEecCCCCCCceEEEecccceeccCCCc--ccccCCCcC-ccCcceecC----CCCCcchhhhhHHHHHHHHHHC
Confidence            69999998877    799999999876554332  222567777 999999987    6788999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      ..||.+ ....+....+.... ..++   +..+|+.+++++++
T Consensus       208 ~~p~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~  248 (283)
T 3bhy_A          208 ASPFLG-ETKQETLTNISAVN-YDFDEEYFSNTSELAKDFIRR  248 (283)
T ss_dssp             SCTTCC-SSHHHHHHHHHTTC-CCCCHHHHTTCCHHHHHHHHT
T ss_pred             CCCCCC-cchHHHHHHhHhcc-cCCcchhcccCCHHHHHHHHH
Confidence            999988 45545555554443 2232   23678888888764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.91  E-value=1.2e-23  Score=155.37  Aligned_cols=165  Identities=16%  Similarity=0.188  Sum_probs=111.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++....   .++++|+..++++.+.+.                .  ....|||+.+ ..+.|+|+
T Consensus        76 ~l~~l~h~~i~~~-~~~~~~~---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~di  150 (287)
T 4f0f_A           76 IMSNLNHPNIVKL-YGLMHNP---PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDL  150 (287)
T ss_dssp             HHTTCCCTTBCCE-EEEETTT---TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCC
T ss_pred             HHHhCCCCCchhh-heeecCC---CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCC
Confidence            5666788777643 4444322   268889988887766431                0  1234777765 00445555


Q ss_pred             CCCcEEEcCCCe-----EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         66 SVDTFHQRLQFL-----LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        66 k~~nil~~~~~~-----~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      ||+||+++.++.     +||+|||++.......    ....+++. |+|||++....  ..++.++|+||+||++|+|++
T Consensus       151 kp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~g~~~-y~aPE~~~~~~--~~~~~~~Di~slG~~l~~l~~  223 (287)
T 4f0f_A          151 RSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV----SGLLGNFQ-WMAPETIGAEE--ESYTEKADTYSFAMILYTILT  223 (287)
T ss_dssp             SGGGEEESCCCTTCSCCEEECCCTTCBCCSSCE----ECCCCCCT-TSCGGGSSCSS--CEECHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEeccCCCCceeEEeCCCCccccccccc----cccCCCcc-ccCchhhccCC--CCcCchhhHHHHHHHHHHHHc
Confidence            699999988776     9999999997654432    22567888 99999984311  456789999999999999999


Q ss_pred             CCCCCCCCCCcHHH-HHHHhh-CCCCCCCCCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQ-LKQVVQ-DDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~-~~~i~~-~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |..||.+....... ...+.. +..+.+ +..+|+++++++++
T Consensus       224 g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  265 (287)
T 4f0f_A          224 GEGPFDEYSYGKIKFINMIREEGLRPTI-PEDCPPRLRNVIEL  265 (287)
T ss_dssp             SSCTTTTCCCCHHHHHHHHHHSCCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCCCCccccccHHHHHHHHhccCCCCCC-CcccCHHHHHHHHH
Confidence            99999874333322 333333 344444 56789999998863

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.91  E-value=1.6e-23  Score=157.48  Aligned_cols=141  Identities=18%  Similarity=0.168  Sum_probs=100.6

Q ss_pred             hHHHHhC-CCCcEEEEEEeee-cCCCceEEEeccCccchHHHHH----------------HHHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFN-QDEIGVTVSSVKT-TDDKKVVLVTGKGEAEKVQKEL----------------ETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l----------------~~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++ |+|++ .+.++.. ......++++++..++++.+.+                .++  .|||+.+++|   +|
T Consensus        82 ~~l~~l~~~~~i~-~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~ivH---~D  155 (330)
T 3nsz_A           82 KILENLRGGPNII-TLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKAL--DYCHSMGIMH---RD  155 (330)
T ss_dssp             HHHHHHTTSTTBC-CEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHH--HHHHHTTEEC---CC
T ss_pred             HHHHHcCCCCCEE-EeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHH--HHHHhCCeee---CC
Confidence            3677787 55554 4454444 3466788999998888776532                233  4788776555   55


Q ss_pred             CCCCcEEEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      +||+||+++.++ .+||+|||++........  .....++.. |+|||++..   ...++.++|+||+||++|+|++|..
T Consensus       156 ikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~ll~g~~  229 (330)
T 3nsz_A          156 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRY-FKGPELLVD---YQMYDYSLDMWSLGCMLASMIFRKE  229 (330)
T ss_dssp             CSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCGG-GCCHHHHTT---CCCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             CCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--ccccccccc-ccChhhhcC---CCcCCchhhHHHHHHHHHHHHhCCC
Confidence            559999999776 899999999976544332  233567777 999999865   1457899999999999999999999


Q ss_pred             CCCCCCCcHHHH
Q psy17162        144 PYDTWGSPFEQL  155 (182)
Q Consensus       144 pf~~~~~~~~~~  155 (182)
                      ||.......+.+
T Consensus       230 p~~~~~~~~~~l  241 (330)
T 3nsz_A          230 PFFHGHDNYDQL  241 (330)
T ss_dssp             SSSCCSSHHHHH
T ss_pred             CcccCCchHHHH
Confidence            996533433333

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.91  E-value=1.7e-23  Score=153.54  Aligned_cols=163  Identities=15%  Similarity=0.168  Sum_probs=109.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .+... +...+++++|+..++++.+.+..                 ....+||+.+++   |+|+|
T Consensus        64 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~---H~dl~  138 (276)
T 2h6d_A           64 NLKLFRHPHIIKL-YQVIS-TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVV---HRDLK  138 (276)
T ss_dssp             HHHTCCCTTBCCE-EEEEE-CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSS---CCCCC
T ss_pred             HHhcCCCCCEeEE-EEEEe-cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCc---cCCCC
Confidence            5667788777644 44444 45678899999988887765421                 113477766554   55566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      |+||+++.++.+||+|||.+........  .....+++. |+|||.+.+    ..+ +.++|+||+|+++|+|++|..||
T Consensus       139 p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~~Di~slG~~l~~l~~g~~p~  211 (276)
T 2h6d_A          139 PENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPN-YAAPEVISG----RLYAGPEVDIWSCGVILYALLCGTLPF  211 (276)
T ss_dssp             GGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTT----SCCCHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             hhhEEECCCCCEEEeecccccccCCCcc--eecccCCcc-ccCHHHHcC----CCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999877654332  222567777 999999987    444 58899999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .........+..+. ..+ +..+++++++++++
T Consensus       212 ~~-~~~~~~~~~~~~~~-~~~-~~~~~~~l~~li~~  244 (276)
T 2h6d_A          212 DD-EHVPTLFKKIRGGV-FYI-PEYLNRSVATLLMH  244 (276)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CcHHHHHHHhhcCc-ccC-chhcCHHHHHHHHH
Confidence            87 34444444444443 445 45678888888753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.91  E-value=1.6e-23  Score=155.34  Aligned_cols=169  Identities=17%  Similarity=0.196  Sum_probs=116.9

Q ss_pred             HHHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+. |+|++ .+.+... +...+++++|+..++++.+.+..                 ....+||+.+++|   +|+
T Consensus        76 ~l~~l~~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H---~dl  150 (298)
T 1phk_A           76 ILRKVSGHPNII-QLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH---RDL  150 (298)
T ss_dssp             HHHHHTTCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC---SCC
T ss_pred             HHHHhcCCCCEe-eeeeeec-cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc---CCC
Confidence            556665 66655 4555554 56778899999988888775421                 1234777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCC--CCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPS--GNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||+||+++.++.+||+|||.+........  .....++.. |+|||++...  .....++.++|+||+|+++|+|++|..
T Consensus       151 ~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  227 (298)
T 1phk_A          151 KPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPS-YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP  227 (298)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCTTCC--BCCCCSCGG-GCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CcceEEEcCCCcEEEecccchhhcCCCcc--cccccCCcc-ccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCC
Confidence            59999999999999999999876544322  223567777 9999988510  001467789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCC--CCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPP--GEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~~i~~  181 (182)
                      ||.+ .........+..+......+  ..+|+++++++++
T Consensus       228 p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  266 (298)
T 1phk_A          228 PFWH-RKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR  266 (298)
T ss_dssp             SSCC-SSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHH
T ss_pred             CCcC-ccHHHHHHHHhcCCcccCcccccccCHHHHHHHHH
Confidence            9987 45555555555554222112  3578889988763

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.91  E-value=5.1e-24  Score=160.48  Aligned_cols=146  Identities=14%  Similarity=0.127  Sum_probs=97.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..+ ++.+.+..                 ....|||+.+++   |+|+
T Consensus        85 ~~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~iv---H~Dl  158 (329)
T 3gbz_A           85 SLLKELQHRNIIE-LKSVIH-HNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL---HRDL  158 (329)
T ss_dssp             HHGGGCCCTTBCC-EEEEEE-ETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCC---CSCC
T ss_pred             HHHHHcCCCCcce-EEEEEe-cCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEE---CCCC
Confidence            3667788877764 444444 45678899999874 66554311                 113477777655   5556


Q ss_pred             CCCcEEEc-----CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         66 SVDTFHQR-----LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        66 k~~nil~~-----~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      ||+||+++     ..+.+||+|||++......... .....++.. |+|||++.+   ...++.++||||+||++|+|++
T Consensus       159 kp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~ell~  233 (329)
T 3gbz_A          159 KPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ-FTHEIITLW-YRPPEILLG---SRHYSTSVDIWSIACIWAEMLM  233 (329)
T ss_dssp             CGGGEEEEC-----CCEEEECCTTHHHHHC------------CCT-TCCHHHHTT---CCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CHHHEEEecCCCCccceEEECcCCCccccCCcccc-cCCCcCCcc-ccCHHHhcC---CCCCCcHHHHHHHHHHHHHHHH
Confidence            69999994     4456999999998665433221 222567778 999999876   1347899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~  160 (182)
                      |.+||.+ ....+.+..+..
T Consensus       234 g~~pf~~-~~~~~~~~~~~~  252 (329)
T 3gbz_A          234 KTPLFPG-DSEIDQLFKIFE  252 (329)
T ss_dssp             SSCSSCC-SSHHHHHHHHHH
T ss_pred             CCCCcCC-CCHHHHHHHHHH
Confidence            9999988 455566666543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.91  E-value=8.6e-24  Score=159.69  Aligned_cols=157  Identities=16%  Similarity=0.195  Sum_probs=109.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccc-hHHHHHH---------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAE-KVQKELE---------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~---------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +.++.. +...+++++++...+ ++.+.+.               .  ....|||+.+++   |+|
T Consensus        81 ~~l~~l~h~~Iv~-~~~~~~-~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv---H~D  155 (335)
T 3dls_A           81 AILSRVEHANIIK-VLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDII---HRD  155 (335)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEE---CSC
T ss_pred             HHHHhCCCCCEee-EEEEEe-eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE---Eec
Confidence            3677788877764 444444 456778888876544 5555321               1  113477777655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~~  143 (182)
                      +||+||+++.++.+||+|||++........  ....+|++. |+|||++.+    ..+ +.++|+||+||++|+|++|..
T Consensus       156 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~~DiwslG~il~el~~g~~  228 (335)
T 3dls_A          156 IKDENIVIAEDFTIKLIDFGSAAYLERGKL--FYTFCGTIE-YCAPEVLMG----NPYRGPELEMWSLGVTLYTLVFEEN  228 (335)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECCTTCC--BCEECSCGG-GCCHHHHTT----CCBCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCHHHEEEcCCCcEEEeecccceECCCCCc--eeccCCCcc-ccChhhhcC----CCCCCCcccchhHHHHHHHHHhCCC
Confidence            669999999999999999999976554332  223568888 999999987    555 688999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+..       ...... . .++..+|++++++++
T Consensus       229 pf~~~~-------~~~~~~-~-~~~~~~~~~l~~li~  256 (335)
T 3dls_A          229 PFCELE-------ETVEAA-I-HPPYLVSKELMSLVS  256 (335)
T ss_dssp             SCSSGG-------GGTTTC-C-CCSSCCCHHHHHHHH
T ss_pred             chhhHH-------HHHhhc-c-CCCcccCHHHHHHHH
Confidence            997621       111111 1 124457888888875

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.91  E-value=6.9e-24  Score=159.76  Aligned_cols=144  Identities=13%  Similarity=0.098  Sum_probs=99.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH---------------HH--HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL---------------ET--LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---------------~~--~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .++.. +...+++++|+..++.+.+..               ..  ....+||+.+++|   +|+|
T Consensus        77 ~l~~l~h~~iv~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH---~dlk  151 (331)
T 4aaa_A           77 LLKQLRHENLVNL-LEVCK-KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH---RDIK  151 (331)
T ss_dssp             HHHHCCCTTBCCE-EEEEE-ETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC---CCCC
T ss_pred             HHhhCCCCCEeeE-EEEee-cCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEc---cCcC
Confidence            6777888777644 44444 456788999998887765532               11  1134777776555   5555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||.+......... .....++.. |+|||++.+   ...++.++|+||+||++|+|++|.+||.
T Consensus       152 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~-y~aPE~~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~  226 (331)
T 4aaa_A          152 PENILVSQSGVVKLCDFGFARTLAAPGEV-YDDEVATRW-YRAPELLVG---DVKYGKAVDVWAIGCLVTEMFMGEPLFP  226 (331)
T ss_dssp             GGGEEECTTSCEEECCCTTC-------------CCCCCT-TCCHHHHTT---CTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             hheEEEcCCCcEEEEeCCCceeecCCccc-cCCCcCCcc-ccCcccccC---CCCcchHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999765443321 222567888 999999876   1367899999999999999999999998


Q ss_pred             CCCCcHHHHHHH
Q psy17162        147 TWGSPFEQLKQV  158 (182)
Q Consensus       147 ~~~~~~~~~~~i  158 (182)
                      + ....+....+
T Consensus       227 ~-~~~~~~~~~~  237 (331)
T 4aaa_A          227 G-DSDIDQLYHI  237 (331)
T ss_dssp             C-SSHHHHHHHH
T ss_pred             C-CCcHHHHHHH
Confidence            8 4544544443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.91  E-value=1.6e-23  Score=159.20  Aligned_cols=144  Identities=17%  Similarity=0.119  Sum_probs=99.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecC-----CCceEEEeccCccchHH---H-------------------HHHHHHHHHHh--h
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD-----DKKVVLVTGKGEAEKVQ---K-------------------ELETLRCIYIQ--D   54 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~---~-------------------~l~~~~~~~l~--~   54 (182)
                      .+..++|+|++..+..+....     ...+++++|+..+....   .                   .+.++  .|+|  +
T Consensus        72 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al--~~lH~~~  149 (360)
T 3e3p_A           72 DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI--GCLHLPS  149 (360)
T ss_dssp             HHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH--HHHTSTT
T ss_pred             HHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH--HHHhCCC
Confidence            345678888875544433221     22367899988765221   1                   12222  3666  5


Q ss_pred             cchhcccccCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         55 YHLCVRSTRYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        55 ~~~~h~~~~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                      .+   +.|+||||+||+++. ++.+||+|||++........  .....+++. |+|||++.+   ...++.++|+||+||
T Consensus       150 ~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~---~~~~~~~~Di~slG~  220 (360)
T 3e3p_A          150 VN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP--NVAYICSRY-YRAPELIFG---NQHYTTAVDIWSVGC  220 (360)
T ss_dssp             TC---CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC--CCSTTSCGG-GCCHHHHTT---CSSCCTHHHHHHHHH
T ss_pred             CC---eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC--cccccCCcc-eeCHHHHcC---CCCCCcHHHHHHHHH
Confidence            54   455666699999997 89999999999987654433  233567888 999999865   134789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        134 SLIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       134 ~l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      ++|+|++|..||.+ ......+..+.
T Consensus       221 il~ell~g~~pf~~-~~~~~~~~~~~  245 (360)
T 3e3p_A          221 IFAEMMLGEPIFRG-DNSAGQLHEIV  245 (360)
T ss_dssp             HHHHHHHSSCSSCC-SSHHHHHHHHH
T ss_pred             HHHHHHhCCCCcCC-CChHHHHHHHH
Confidence            99999999999988 45555555544

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=7.4e-24  Score=159.23  Aligned_cols=170  Identities=34%  Similarity=0.516  Sum_probs=94.5

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH--------------------H--HHHHHHhhcchhccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE--------------------T--LRCIYIQDYHLCVRS   61 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--------------------~--~~~~~l~~~~~~h~~   61 (182)
                      +++.++|+|++. +.++.. +...+++++|+..+ .+.+.+.                    .  ....+||+.  .++.
T Consensus        74 ~~~~~~h~niv~-~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~iv  148 (327)
T 3aln_A           74 VMRSSDCPYIVQ-FYGALF-REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKII  148 (327)
T ss_dssp             HHSSCCCTTBCC-EEEEEE-CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCC
T ss_pred             HHHcCCCCcEee-eeeEEE-eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEe
Confidence            345566777664 444444 35678899998876 3322211                    0  012367665  1345


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |+|+||+||+++.++.+||+|||++........  .....++.. |+|||++........++.++|+||+|+++|+|++|
T Consensus       149 H~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (327)
T 3aln_A          149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--KTRDAGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYELATG  225 (327)
T ss_dssp             CSCCCGGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHS
T ss_pred             ECCCCHHHEEEcCCCCEEEccCCCceecccccc--cccCCCCcc-ccCceeeccccCcCCCCchhhHHHHHHHHHHHHHC
Confidence            566669999999999999999999977654432  222467788 99999984211115678999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      ..||.+.....+.+..+..+.++.++.   ..+++++++++++
T Consensus       226 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  268 (327)
T 3aln_A          226 RFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNL  268 (327)
T ss_dssp             CCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHH
T ss_pred             CCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHH
Confidence            999987444444555555565555542   3578899988763

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.91  E-value=9.1e-24  Score=165.62  Aligned_cols=135  Identities=18%  Similarity=0.146  Sum_probs=92.6

Q ss_pred             hHHHHhCCCCcEEEEEEeee---cCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT---TDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++..+..+..   .+...+++++|+.. +++.+.                   +.++  .|||+.+++| 
T Consensus       104 ~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL--~~LH~~~iiH-  179 (458)
T 3rp9_A          104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGV--KYVHSAGILH-  179 (458)
T ss_dssp             HHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHH--HHHHHTTCBC-
T ss_pred             HHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHH--HHHHhCCcCC-
Confidence            36788888888754443322   22356889999865 444443                   2333  3787776555 


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh--------------------------hhcccCCCCCCcccCccccC
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI--------------------------IRGLYGADCDPNFIRPERID  114 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--------------------------~~~~~~~~~~~~~~aPe~~~  114 (182)
                        +||||+|||++.++.+||+|||+++.......                          ...+..+|++. |+|||++.
T Consensus       180 --rDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-Y~aPE~~~  256 (458)
T 3rp9_A          180 --RDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRW-YRAPELIL  256 (458)
T ss_dssp             --CCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCT-TCCHHHHT
T ss_pred             --CCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCccccc-ccChHHhh
Confidence              55569999999999999999999976542210                          01233577888 99999864


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHHHh-----------CCCCCCC
Q psy17162        115 PSGNPSNYDIRSDVWSLGISLIELAT-----------GRFPYDT  147 (182)
Q Consensus       115 ~~~~~~~~~~~~Diwslg~~l~~l~~-----------g~~pf~~  147 (182)
                      .   ...++.++||||+||++|+|++           |.++|.+
T Consensus       257 ~---~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g  297 (458)
T 3rp9_A          257 L---QENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPG  297 (458)
T ss_dssp             T---CCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC-
T ss_pred             C---CCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCC
Confidence            3   1568899999999999999998           7777766

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.91  E-value=1.8e-23  Score=155.44  Aligned_cols=166  Identities=12%  Similarity=0.241  Sum_probs=112.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH---------------------HHHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE---------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++..+..+...+...+++++|+...+ +.+.                     +.+  ..|||+.+++   |
T Consensus        59 ~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~a--l~~LH~~~i~---H  132 (305)
T 2wtk_C           59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDG--LEYLHSQGIV---H  132 (305)
T ss_dssp             HHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHH--HHHHHHTTEE---C
T ss_pred             HHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHH--HHHHHHCCee---e
Confidence            56778888877555444444566788999998766 2221                     222  2477777655   5


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +|+||+||+++.++.+||+|||.+........ .......++.. |+|||++.+..  ..++.++|+||+|+++|+|++|
T Consensus       133 ~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~~~--~~~~~~~Di~slG~il~~l~~g  209 (305)
T 2wtk_C          133 KDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA-FQPPEIANGLD--TFSGFKVDIWSAGVTLYNITTG  209 (305)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGG-GCCHHHHTCCS--CEESHHHHHHHHHHHHHHHHHS
T ss_pred             cCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCC-CcChhhccCcc--cCCcchhhHHHHHHHHHHHHhC
Confidence            55569999999999999999999866532111 01122557777 99999987511  2236789999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..||.+ ....+....+..+. ..+ +..+++.+.+++++
T Consensus       210 ~~p~~~-~~~~~~~~~i~~~~-~~~-~~~~~~~l~~li~~  246 (305)
T 2wtk_C          210 LYPFEG-DNIYKLFENIGKGS-YAI-PGDCGPPLSDLLKG  246 (305)
T ss_dssp             SCSCCC-SSHHHHHHHHHHCC-CCC-CSSSCHHHHHHHHH
T ss_pred             CCCCCC-chHHHHHHHHhcCC-CCC-CCccCHHHHHHHHH
Confidence            999988 45545555555553 445 45688899888763

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.91  E-value=5e-24  Score=158.32  Aligned_cols=167  Identities=23%  Similarity=0.317  Sum_probs=115.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .+... +...+++++++..++++.+.+..                  ....|||+.+++|   +|
T Consensus        68 ~~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H---~d  142 (302)
T 2j7t_A           68 EILATCDHPYIVKL-LGAYY-HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH---RD  142 (302)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE-CC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC---CC
T ss_pred             HHHhcCCCCCEeee-eeeee-eCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCccc---CC
Confidence            35677888877644 44444 35578899999888877654321                  1134777776554   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccC-----CCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERID-----PSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~-----~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      +||+||+++.++.+||+|||++......... .....++.. |+|||++.     .    ..++.++|+||+|+++|+|+
T Consensus       143 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~~~~----~~~~~~~Di~slG~il~~l~  216 (302)
T 2j7t_A          143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQK-RDSFIGTPY-WMAPEVVMCETMKD----TPYDYKADIWSLGITLIEMA  216 (302)
T ss_dssp             CSGGGEEECTTSCEEECCCHHHHHHHHHHHC------CCGG-GCCHHHHHHHHTTS----TTTTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEECCCCCEEEEECCCCccccccccc-cccccCChh-hcCCeeeccccCCC----CCCchhhhHHHHHHHHHHHh
Confidence            5599999999999999999987543222211 122567778 99999983     3    56789999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      +|..||.+ .........+..+..+... +..+|.++++++++
T Consensus       217 ~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  258 (302)
T 2j7t_A          217 QIEPPHHE-LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKI  258 (302)
T ss_dssp             HSSCTTTT-SCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             cCCCCCcc-CCHHHHHHHHhccCCcccCCccccCHHHHHHHHH
Confidence            99999988 4555555555555544332 45788889888753

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.91  E-value=7.7e-24  Score=156.81  Aligned_cols=167  Identities=15%  Similarity=0.153  Sum_probs=113.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.|++++..+..+.. +....++++|+. .+++.+.+..                  ....|||+.+++   |+|
T Consensus        56 ~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv---H~d  130 (296)
T 3uzp_A           56 KIYKMMQGGVGIPTIRWCGA-EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI---HRD  130 (296)
T ss_dssp             HHHHHHTTSTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE---CSC
T ss_pred             HHHHHhhcCCCCCccccccC-CCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee---eCC
Confidence            46778888888776655544 566778999998 6676664421                  113477776555   555


Q ss_pred             CCCCcEEEc---CCCeEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         65 FSVDTFHQR---LQFLLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        65 lk~~nil~~---~~~~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      +||+||+++   .++.+||+|||.+.........      ......++.. |+|||++.+    ..++.++|+||+|+++
T Consensus       131 lkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il  205 (296)
T 3uzp_A          131 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR-YASINTHLG----IEQSRRDDLESLGYVL  205 (296)
T ss_dssp             CCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTT-TCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred             CCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccc-cCChhhhcC----CCCCcchhhHHHHHHH
Confidence            669999994   7789999999998765443220      0122567888 999999988    7788999999999999


Q ss_pred             HHHHhCCCCCCCCCC--cHHHHHHHhhC----CCCCCCCCCCCHHHHHHhh
Q psy17162        136 IELATGRFPYDTWGS--PFEQLKQVVQD----DPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~--~~~~~~~i~~~----~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|++|..||.+...  ..+....+..+    ..+.+ +..+|+++.++++
T Consensus       206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  255 (296)
T 3uzp_A          206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL-CKGYPSEFATYLN  255 (296)
T ss_dssp             HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH-TTTSCHHHHHHHH
T ss_pred             HHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHH-HhhCCHHHHHHHH
Confidence            999999999986221  11222222221    11111 2457777877765

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.91  E-value=5e-24  Score=159.91  Aligned_cols=167  Identities=16%  Similarity=0.191  Sum_probs=112.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++...  ..+++++|+..++++.+.+                   .+  ..|||+.+++   |+
T Consensus        67 ~~l~~l~h~~i~~~-~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~--l~~lH~~~iv---H~  138 (322)
T 2ycf_A           67 EILKKLNHPCIIKI-KNFFDA--EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGII---HR  138 (322)
T ss_dssp             HHHHHCCCTTBCCE-EEEEES--SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHH--HHHHHHTTEE---CC
T ss_pred             HHHHhCCCCCCceE-eeEEcC--CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHH--HHHHHHCCee---cc
Confidence            36777888887654 444432  3378999998887776532                   22  3477776654   55


Q ss_pred             CCCCCcEEEcCCCe---EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRLQFL---LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~~~~---~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |+||+||+++.++.   +||+|||++........  .....++.. |+|||++.... ...++.++|+||+||++|+|++
T Consensus       139 dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~-y~aPE~~~~~~-~~~~~~~~Di~slG~il~~l~~  214 (322)
T 2ycf_A          139 DLKPENVLLSSQEEDCLIKITDFGHSKILGETSL--MRTLCGTPT-YLAPEVLVSVG-TAGYNRAVDCWSLGVILFICLS  214 (322)
T ss_dssp             CCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH--HHHHHSCCT-TCCHHHHHHTT-TTTCTTHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEecCCCCCeEEEccCccceecccccc--cccccCCcC-ccCchhhccCC-CCCCCchhhHHHHHHHHHHHHh
Confidence            56699999987654   99999999977654332  112457777 99999874211 1567899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      |..||.+..........+..+.....+  +..+|+++++++++
T Consensus       215 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  257 (322)
T 2ycf_A          215 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK  257 (322)
T ss_dssp             SSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             CCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHH
Confidence            999998743332333334444433222  23678888888753

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.91  E-value=4.9e-24  Score=160.52  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=99.5

Q ss_pred             hHHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+ +|+|++ .+.++.. +....++++++. ++++.+.+..                  .+..|||+.+++   |+
T Consensus        56 ~~l~~l~~h~~i~-~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ii---Hr  129 (330)
T 2izr_A           56 RFYKQLGSGDGIP-QVYYFGP-CGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLI---YR  129 (330)
T ss_dssp             HHHHHHCSCTTSC-CEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE---CC
T ss_pred             HHHHHhhCCCCCC-EEEEEEe-cCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCee---cc
Confidence            467778 555554 5555555 356778999998 7777664421                  123477776554   55


Q ss_pred             CCCCCcEEEcCCCe-----EEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHH
Q psy17162         64 YFSVDTFHQRLQFL-----LHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLG  132 (182)
Q Consensus        64 ~lk~~nil~~~~~~-----~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg  132 (182)
                      ||||+||+++.++.     +||+|||++..........      .....|++. |+|||++.+    ..++.++|+||+|
T Consensus       130 Dlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG  204 (330)
T 2izr_A          130 DVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTAR-YMSINTHLG----KEQSRRDDLEALG  204 (330)
T ss_dssp             CCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTT-TCCHHHHTT----CCCCHHHHHHHHH
T ss_pred             CCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCcc-ccChHHHcC----CCCCchhHHHHHH
Confidence            56699999998887     9999999997654432210      123678888 999999988    7889999999999


Q ss_pred             HHHHHHHhCCCCCCCC
Q psy17162        133 ISLIELATGRFPYDTW  148 (182)
Q Consensus       133 ~~l~~l~~g~~pf~~~  148 (182)
                      |++|+|++|..||.+.
T Consensus       205 ~il~ell~g~~Pf~~~  220 (330)
T 2izr_A          205 HMFMYFLRGSLPWQGL  220 (330)
T ss_dssp             HHHHHHHHSSCTTTTC
T ss_pred             HHHHHHhcCCCCcccc
Confidence            9999999999999873

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.91  E-value=4.6e-24  Score=162.76  Aligned_cols=134  Identities=11%  Similarity=0.002  Sum_probs=97.2

Q ss_pred             HHHHhC---CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------------HHHHHHhhcchh
Q psy17162          4 IRAVFN---QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------------LRCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------------~~~~~l~~~~~~   58 (182)
                      +++.+.   |+|++ .+.+... .....+++||+..++++.+.+..                      .+..|||+.+  
T Consensus       117 ~~~~l~~~~~~~iv-~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--  192 (365)
T 3e7e_A          117 LMERLKPSMQHMFM-KFYSAHL-FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--  192 (365)
T ss_dssp             HHHHSCGGGGGGBC-CEEEEEE-CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--
T ss_pred             HHHHhhhhhhhhhh-hhheeee-cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--
Confidence            344444   55554 4444444 45567899999998888776531                      0134677665  


Q ss_pred             cccccCCCCCcEEEcC-----------CCeEEEeccCCCCCCCchh-hhhcccCCCCCCcccCccccCCCCCCCCCCccc
Q psy17162         59 VRSTRYFSVDTFHQRL-----------QFLLHLFRFALSGNQDDLL-IIRGLYGADCDPNFIRPERIDPSGNPSNYDIRS  126 (182)
Q Consensus        59 h~~~~~lk~~nil~~~-----------~~~~kl~dfg~a~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~  126 (182)
                       +.|+||||+||+++.           ++.+||+|||+|....... .......+|+.. |+|||++.+    ..++.++
T Consensus       193 -ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~  266 (365)
T 3e7e_A          193 -IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSG-FQCVEMLSN----KPWNYQI  266 (365)
T ss_dssp             -EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTS-CCCHHHHTT----CCBSTHH
T ss_pred             -eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCC-CCChHHhcC----CCCCccc
Confidence             555566699999988           8999999999996533111 111233678888 999999988    7789999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCC
Q psy17162        127 DVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       127 Diwslg~~l~~l~~g~~pf~~  147 (182)
                      |+||+||++|+|++|+.||..
T Consensus       267 DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          267 DYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             HHHHHHHHHHHHHHSSCCCEE
T ss_pred             cHHHHHHHHHHHHhCCCcccc
Confidence            999999999999999999853

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.91  E-value=1.2e-23  Score=157.00  Aligned_cols=144  Identities=13%  Similarity=0.108  Sum_probs=98.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH---------------H--HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE---------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++..+ ++.. +...+++++|+..++.+.+.+.               .  .+..|||+.+++   |+|+
T Consensus        54 ~~l~~l~h~~i~~~~-~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~iv---H~dl  128 (311)
T 4agu_A           54 RMLKQLKHPNLVNLL-EVFR-RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI---HRDV  128 (311)
T ss_dssp             HHHHHCCCTTBCCEE-EEEE-ETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhCCCCCccchh-heee-cCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCc---CCCC
Confidence            367778888876444 4444 4566889999988887665321               0  123477777655   4555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||.+......... .....++.. |+|||++.+   ...++.++|+||+|+++|+|++|..||
T Consensus       129 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slG~il~~l~~g~~p~  203 (311)
T 4agu_A          129 KPENILITKHSVIKLCDFGFARLLTGPSDY-YDDEVATRW-YRSPELLVG---DTQYGPPVDVWAIGCVFAELLSGVPLW  203 (311)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECC-------------GG-GCCHHHHHT---CSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ChhhEEEcCCCCEEEeeCCCchhccCcccc-cCCCcCCcc-ccChHHHhc---CCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999765543321 122567777 999999865   145789999999999999999999999


Q ss_pred             CCCCCcHHHHHH
Q psy17162        146 DTWGSPFEQLKQ  157 (182)
Q Consensus       146 ~~~~~~~~~~~~  157 (182)
                      .+ ....+....
T Consensus       204 ~~-~~~~~~~~~  214 (311)
T 4agu_A          204 PG-KSDVDQLYL  214 (311)
T ss_dssp             CC-SSHHHHHHH
T ss_pred             CC-CCHHHHHHH
Confidence            88 344444433

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.90  E-value=4.3e-23  Score=154.79  Aligned_cols=139  Identities=15%  Similarity=0.158  Sum_probs=100.2

Q ss_pred             CCCCcEEEEEEee---ecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccCCC
Q psy17162          9 NQDEIGVTVSSVK---TTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         9 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +|+|++..+....   ......+++++|+..+ ++.+.+..                   ....|||+.+++   |+|+|
T Consensus        72 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~---H~dlk  147 (326)
T 1blx_A           72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVV---HRDLK  147 (326)
T ss_dssp             CCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCC---CCCCC
T ss_pred             CCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCce---eccCC
Confidence            7777764433222   1245667789998773 55554311                   113477777655   55555


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||.+........  .....++.. |+|||++..    ..++.++|+||+|+++|+|++|..||.
T Consensus       148 p~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~~pf~  220 (326)
T 1blx_A          148 PQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLW-YRAPEVLLQ----SSYATPVDLWSVGCIFAEMFRRKPLFR  220 (326)
T ss_dssp             GGGEEECTTCCEEECSCCSCCCCCGGGG--GCCCCCCCT-TCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             HHHeEEcCCCCEEEecCcccccccCCCC--ccccccccc-eeCHHHHhc----CCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence            9999999999999999999977654432  233567888 999999987    678899999999999999999999998


Q ss_pred             CCCCcHHHHHHHh
Q psy17162        147 TWGSPFEQLKQVV  159 (182)
Q Consensus       147 ~~~~~~~~~~~i~  159 (182)
                      + ....+.+..+.
T Consensus       221 ~-~~~~~~~~~i~  232 (326)
T 1blx_A          221 G-SSDVDQLGKIL  232 (326)
T ss_dssp             C-SSHHHHHHHHH
T ss_pred             C-CCHHHHHHHHH
Confidence            8 45555555554

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.90  E-value=9.1e-24  Score=156.05  Aligned_cols=166  Identities=14%  Similarity=0.144  Sum_probs=114.1

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .++...+  ..++++++...+++.+.+...                  ...+||+.++   .|+|+
T Consensus        74 ~l~~l~h~~i~~~-~~~~~~~--~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~di  147 (291)
T 1u46_A           74 AMHSLDHRNLIRL-YGVVLTP--PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF---IHRDL  147 (291)
T ss_dssp             HHHHCCCTTBCCE-EEEECSS--SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHhCCCCCcccE-EEEEccC--CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCc---ccCCC
Confidence            5677788777644 4444422  378899998888877654211                  1246776654   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||++.........  ......++.. |+|||++..    ..++.++|+||+|+++|+|++ |.
T Consensus       148 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~~g~  222 (291)
T 1u46_A          148 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA-WCAPESLKT----RTFSHASDTWMFGVTLWEMFTYGQ  222 (291)
T ss_dssp             CGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             chheEEEcCCCCEEEccccccccccccccchhhhccCCCCce-eeCchhhcC----CCCCchhhHHHHHHHHHHHHhCCC
Confidence            699999999999999999998765433210  0111345556 999999987    678899999999999999999 99


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+ ....+....+.........+..+|+++++++++
T Consensus       223 ~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  260 (291)
T 1u46_A          223 EPWIG-LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ  260 (291)
T ss_dssp             CTTTT-CCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHH
T ss_pred             CCccc-CCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHH
Confidence            99988 455555555554432222255789999998763

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.90  E-value=9.9e-24  Score=157.74  Aligned_cols=156  Identities=17%  Similarity=0.137  Sum_probs=103.5

Q ss_pred             hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCCCCCc
Q psy17162          8 FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYFSVDT   69 (182)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~lk~~n   69 (182)
                      .+|+|++ .+.+... +...+++++|+.. +++.+.+..                  .++.|||+.++   .|+|+||+|
T Consensus       114 ~~h~~iv-~l~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~Dikp~N  187 (311)
T 3p1a_A          114 GQHPCCV-RLEQAWE-EGGILYLQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL---VHLDVKPAN  187 (311)
T ss_dssp             CCCTTBC-CEEEEEE-ETTEEEEEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCSGGG
T ss_pred             cCCCcEE-EEEEEEE-eCCEEEEEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHH
Confidence            3666665 4444444 4667889999874 355443211                  12347877765   455566999


Q ss_pred             EEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q psy17162         70 FHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWG  149 (182)
Q Consensus        70 il~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~  149 (182)
                      |+++.++.+||+|||++........  .....|++. |+|||++.+     .++.++||||+||++|+|++|..|+.+ .
T Consensus       188 Ill~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~-----~~~~~~DiwslG~il~el~~g~~~~~~-~  258 (311)
T 3p1a_A          188 IFLGPRGRCKLGDFGLLVELGTAGA--GEVQEGDPR-YMAPELLQG-----SYGTAADVFSLGLTILEVACNMELPHG-G  258 (311)
T ss_dssp             EEECGGGCEEECCCTTCEECC--------CCCCCGG-GCCGGGGGT-----CCSTHHHHHHHHHHHHHHHHTCCCCSS-H
T ss_pred             EEECCCCCEEEccceeeeecccCCC--CcccCCCcc-ccCHhHhcC-----CCCchhhHHHHHHHHHHHHhCCCCCCC-c
Confidence            9999999999999999876654332  233568888 999998875     578999999999999999999776655 1


Q ss_pred             CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        150 SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       150 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                         .....+..+..++..+..+|+++++++++
T Consensus       259 ---~~~~~~~~~~~~~~~~~~~~~~l~~li~~  287 (311)
T 3p1a_A          259 ---EGWQQLRQGYLPPEFTAGLSSELRSVLVM  287 (311)
T ss_dssp             ---HHHHHHTTTCCCHHHHTTSCHHHHHHHHH
T ss_pred             ---cHHHHHhccCCCcccccCCCHHHHHHHHH
Confidence               22333333332211134678888888753

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.90  E-value=6.5e-24  Score=157.71  Aligned_cols=170  Identities=14%  Similarity=0.094  Sum_probs=115.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.....+...+...+++++++..++++.+.+..                  ....+||+.++   .|+|
T Consensus        75 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~d  151 (302)
T 4e5w_A           75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY---VHRD  151 (302)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSC
T ss_pred             HHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCc---ccCC
Confidence            36677888887755444444444668899999988888775411                  11346776654   5555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.+||+|||++........  .......++.. |+|||++.+    ..++.++|+||+|+++|+|++|.
T Consensus       152 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~  226 (302)
T 4e5w_A          152 LAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF-WYAPECLMQ----SKFYIASDVWSFGVTLHELLTYC  226 (302)
T ss_dssp             CSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             CchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCcc-ccCCeeecC----CCCCcchhHHHHHHHHHHHHHcc
Confidence            669999999999999999999876544321  11222456666 999999987    67889999999999999999998


Q ss_pred             CCCCCC-------------CCcH-HHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTW-------------GSPF-EQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~-------------~~~~-~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .|+...             .... .....+..+...+. +..+|+++++++++
T Consensus       227 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  278 (302)
T 4e5w_A          227 DSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEVYQLMRK  278 (302)
T ss_dssp             CGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCC-CCCCCHHHHHHHHH
Confidence            876321             1111 22222334444444 55689999998864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.90  E-value=5.3e-23  Score=153.73  Aligned_cols=167  Identities=32%  Similarity=0.492  Sum_probs=107.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhc-chhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDY-HLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~-~~~h~~~   62 (182)
                      +++.++|+|++.. .+... +...+++++|+.. ..+...                    +.+  ..|||+. +   +.|
T Consensus        77 ~~~~~~h~~i~~~-~~~~~-~~~~~~lv~e~~~-~~~~~l~~~~~~~~~~~~~~~~~~~i~~~--l~~lH~~~~---i~H  148 (318)
T 2dyl_A           77 VLKSHDCPYIVQC-FGTFI-TNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKA--LYYLKEKHG---VIH  148 (318)
T ss_dssp             HHHTTTCTTBCCE-EEEEE-CSSEEEEEECCCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHH--HHHHHHHHC---CCC
T ss_pred             HHHhcCCCceeeE-EEEEe-cCCcEEEEEeccC-CcHHHHHHHhccCCCHHHHHHHHHHHHHH--HHHHHhhCC---EEe
Confidence            4556677776644 44444 3557889999863 222211                    122  2377763 4   455


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC-CCCCCCccchHHHHHHHHHHHHhC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG-NPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +|+||+||+++.++.+||+|||++........  .....+++. |+|||++.... ....++.++|+||+|+++|+|++|
T Consensus       149 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (318)
T 2dyl_A          149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAA-YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG  225 (318)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTC----------------CCT-TCCHHHHC--------CCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCHHHEEECCCCCEEEEECCCchhccCCcc--ccccCCCcc-ccChhhcccccccccCCccccchhhHHHHHHHHHhC
Confidence            56669999999999999999999876544332  222567778 99999985311 014677899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCC-CCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPP-GEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~~~~i~~  181 (182)
                      ..||.......+....+..+.++.++. ..+|+++++++++
T Consensus       226 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  266 (318)
T 2dyl_A          226 QFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKD  266 (318)
T ss_dssp             SCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHH
Confidence            999987555666677777776666642 3588999988763

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.90  E-value=1.8e-23  Score=153.37  Aligned_cols=166  Identities=14%  Similarity=0.165  Sum_probs=111.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.. .+... +....++++|+..++++.+.                   +.++  .+||+.+++|   +|
T Consensus        58 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H---~d  130 (276)
T 2yex_A           58 INKMLNHENVVKF-YGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV--VYLHGIGITH---RD  130 (276)
T ss_dssp             HHHTCCCTTBCCE-EEEEE-ETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHH--HHHHHTTEEC---SC
T ss_pred             HHHhcCCCCceee-eeEEE-cCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH--HHHHhCCeec---cC
Confidence            5667788777644 44444 45667889998776655432                   2233  3777776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.+||+|||.+........ .......++.. |+|||++..    ..+ +.++|+||+|+++|+|++|.
T Consensus       131 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~~Di~slG~il~~l~~g~  205 (276)
T 2yex_A          131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-YVAPELLKR----REFHAEPVDVWSCGIVLTAMLAGE  205 (276)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGG-GCCGGGGTC----SSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             CChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccC-ccChHHHhc----CCCCCCcchHHHHHHHHHHHHhCC
Confidence            559999999999999999999876543221 11122567777 999999986    444 67899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+..........+........+...+|+.+++++++
T Consensus       206 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (276)
T ss_dssp             CCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHH
Confidence            999874333233333333322222234678888888763

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.90  E-value=2.8e-24  Score=161.37  Aligned_cols=142  Identities=15%  Similarity=0.133  Sum_probs=95.6

Q ss_pred             ceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCC
Q psy17162         27 KVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALS   86 (182)
Q Consensus        27 ~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a   86 (182)
                      .+++++|++.++++.+.+..                    ....|||+.+++   |+|+||+||+++.++.+||+|||++
T Consensus       135 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---H~Dlkp~NIll~~~~~~kL~DfG~a  211 (332)
T 3qd2_B          135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLM---HRDLKPSNIFFTMDDVVKVGDFGLV  211 (332)
T ss_dssp             EEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEE---CCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCee---ecCCCcccEEEeCCCCEEEeecCcc
Confidence            37899999988777664311                    113477776654   5556699999999999999999998


Q ss_pred             CCCCchhh-----------hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHH
Q psy17162         87 GNQDDLLI-----------IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQL  155 (182)
Q Consensus        87 ~~~~~~~~-----------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~  155 (182)
                      ........           ......+|++. |+|||++.+    ..++.++|+||+||++|+|++|..|+..   .....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~~~~~~~~---~~~~~  283 (332)
T 3qd2_B          212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKL-YMSPEQIHG----NNYSHKVDIFSLGLILFELLYSFSTQME---RVRII  283 (332)
T ss_dssp             EECSCC--------------CCCSCC-CGG-GSCHHHHHC----CCCCTHHHHHHHHHHHHHHHSCCCCHHH---HHHHH
T ss_pred             cccccchhhccccccccccccccccCCCcC-ccChHHhcC----CCCcchhhHHHHHHHHHHHHHcCCChhH---HHHHH
Confidence            77654321           11222568888 999999988    7889999999999999999998776533   22222


Q ss_pred             HHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        156 KQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       156 ~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..+.....+.. +...+++++++++
T Consensus       284 ~~~~~~~~~~~-~~~~~~~~~~li~  307 (332)
T 3qd2_B          284 TDVRNLKFPLL-FTQKYPQEHMMVQ  307 (332)
T ss_dssp             HHHHTTCCCHH-HHHHCHHHHHHHH
T ss_pred             HHhhccCCCcc-cccCChhHHHHHH
Confidence            22333322211 2345666677664

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.90  E-value=1.6e-23  Score=154.99  Aligned_cols=169  Identities=20%  Similarity=0.299  Sum_probs=114.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++..+ +... +...+++++|+..++++.+.+..                    ....+||+.++   .|
T Consensus        71 ~~l~~l~h~~iv~~~-~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H  145 (295)
T 2clq_A           71 ALHKHLKHKNIVQYL-GSFS-ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI---VH  145 (295)
T ss_dssp             HHHHTCCCTTBCCEE-EEEE-ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTE---EC
T ss_pred             HHHHhCCCCCEeeEe-eEEE-eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCE---Ec
Confidence            356778888876544 4443 45568899999887777664321                    01246776654   55


Q ss_pred             cCCCCCcEEEcC-CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         63 RYFSVDTFHQRL-QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        63 ~~lk~~nil~~~-~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +|+||+||+++. ++.+||+|||.+......... .....++.. |+|||++....  ..++.++|+||+|+++|+|++|
T Consensus       146 ~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~-y~aPE~~~~~~--~~~~~~~Di~slG~il~~l~~g  221 (295)
T 2clq_A          146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC-TETFTGTLQ-YMAPEIIDKGP--RGYGKAADIWSLGCTIIEMATG  221 (295)
T ss_dssp             CCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGG-GCCHHHHHHGG--GGCSHHHHHHHHHHHHHHHHHT
T ss_pred             cCCChhhEEEECCCCCEEEeecccccccCCCCCc-ccccCCCcc-ccChhhhcCCC--CCCCcHHHHHHHHHHHHHHHHC
Confidence            556699999987 899999999998765443221 222567777 99999987510  2377899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..||.+........... .....+.+ +..+|+++++++++
T Consensus       222 ~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  261 (295)
T 2clq_A          222 KPPFYELGEPQAAMFKVGMFKVHPEI-PESMSAEAKAFILK  261 (295)
T ss_dssp             SCTTGGGSSHHHHHHHHHHHCCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCCccCCCchhHHHHhhccccccccc-cccCCHHHHHHHHH
Confidence            99997633333333332 33444555 45689999988753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.90  E-value=1.3e-23  Score=160.58  Aligned_cols=142  Identities=20%  Similarity=0.262  Sum_probs=90.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchH------------------HHHHHHHHHHHHhhcchhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKV------------------QKELETLRCIYIQDYHLCVR   60 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l------------------~~~l~~~~~~~l~~~~~~h~   60 (182)
                      .+++.++|+|++..+..+...    ....+++++++.. +++                  .+.+.++.  |||+.+++|+
T Consensus        80 ~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~i~~qi~~aL~--~LH~~givH~  156 (367)
T 2fst_X           80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILRGLK--YIHSADIIHR  156 (367)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCC-EECC-----CCCCHHHHHHHHHHHHHHHH--HHHHTTCCCC
T ss_pred             HHHHhCCCCCCCcEEEEEecCCccccCCeEEEEecccC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHH--HHHHCCeeeC
Confidence            367788888876443333221    2245677777652 222                  12234444  8887765555


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                         |+||+||+++.++.+||+|||+++......    ....++.. |+|||++.+   ...++.++|+||+||++|+|++
T Consensus       157 ---Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~ell~  225 (367)
T 2fst_X          157 ---DLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRW-YRAPEIMLN---WMHYNQTVDIWSVGCIMAELLT  225 (367)
T ss_dssp             ---CCCGGGEEECTTCCEEECC-------------------CCCT-TCCHHHHTT---CCSCCTTHHHHHHHHHHHHHHH
T ss_pred             ---CCCHhhEEECCCCCEEEeeccccccccccC----CCcCcCcC-ccChHHHcC---CcCCCchhhHHHHHHHHHHHHh
Confidence               555999999999999999999997654332    23578888 999999875   1467899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHh
Q psy17162        141 GRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~  159 (182)
                      |++||.+ ....+++..+.
T Consensus       226 g~~pf~~-~~~~~~l~~i~  243 (367)
T 2fst_X          226 GRTLFPG-TDHIDQLKLIL  243 (367)
T ss_dssp             SSCSCCC-SSHHHHHHHHH
T ss_pred             CCCCCCC-CCHHHHHHHHH
Confidence            9999998 45556655554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.90  E-value=8e-24  Score=158.65  Aligned_cols=170  Identities=15%  Similarity=0.124  Sum_probs=116.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|+|++.........+...+++++++...+++.+.+..                ....+||+.+++|   +|+|
T Consensus        85 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH---~Dik  161 (318)
T 3lxp_A           85 DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIH---RDLA  161 (318)
T ss_dssp             HHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEEC---SCCS
T ss_pred             HHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccC---CCCc
Confidence            36778888888755555545446778899999988888774311                1234777776555   5566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      |+||+++.++.+||+|||.+........  .......++.. |+|||++..    ..++.++|+||+|+++|+|++|..|
T Consensus       162 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~ll~g~~p  236 (318)
T 3lxp_A          162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-WYAPECLKE----YKFYYASDVWSFGVTLYELLTHCDS  236 (318)
T ss_dssp             GGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTTCG
T ss_pred             hheEEEcCCCCEEECCccccccccccccccccccCCCCCce-eeChHHhcC----CCCCcHHHHHHHHHHHHHHHhCCCc
Confidence            9999999999999999999976544321  01122445666 999999987    6788999999999999999999999


Q ss_pred             CCCCCCc-------------H-HHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSP-------------F-EQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~-------------~-~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |......             . .....+..+..++. +..+|+++.+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  286 (318)
T 3lxp_A          237 SQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR-PDKCPAEVYHLMKN  286 (318)
T ss_dssp             GGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             ccccchhhhhhhcccccchhHHHHHHHHhcccCCCC-CccccHHHHHHHHH
Confidence            9651100             0 11112223444444 55789999998863

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.90  E-value=8.6e-23  Score=159.11  Aligned_cols=128  Identities=17%  Similarity=0.155  Sum_probs=89.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCC----CceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDD----KKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h   59 (182)
                      .+++.++|+|++.. .++.....    ..+++++|+... ++.+.+                   .++  .|||+.+++ 
T Consensus        77 ~~l~~l~h~nIv~l-~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL--~~LH~~giv-  151 (432)
T 3n9x_A           77 TILNRLKSDYIIRL-YDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGE--NFIHESGII-  151 (432)
T ss_dssp             HHHHHCCCTTBCCE-EEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHH--HHHHHTTEE-
T ss_pred             HHHHHcCCCCcceE-EEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHH--HHHHHCCCC-
Confidence            36778888877644 44443232    568899998764 555532                   233  377777655 


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---------------------hcccCCCCCCcccCccccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---------------------RGLYGADCDPNFIRPERIDPSGN  118 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---------------------~~~~~~~~~~~~~aPe~~~~~~~  118 (182)
                        |+||||+||+++.++.+||+|||+++........                     ..+..+|++. |+|||++..   
T Consensus       152 --HrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-Y~APE~~~~---  225 (432)
T 3n9x_A          152 --HRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRW-YRAPELILL---  225 (432)
T ss_dssp             --CCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCT-TCCHHHHTT---
T ss_pred             --CCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCcc-ccCHHHHhc---
Confidence              5555699999999999999999999765432210                     1234678888 999998643   


Q ss_pred             CCCCCccchHHHHHHHHHHHHhC
Q psy17162        119 PSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus       119 ~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ...++.++||||+||++|+|++|
T Consensus       226 ~~~~~~~~DiwSlG~il~ell~g  248 (432)
T 3n9x_A          226 QENYTKSIDIWSTGCIFAELLNM  248 (432)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCcccccchHHHHHHHHHhc
Confidence            15688999999999999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.90  E-value=4.9e-24  Score=160.28  Aligned_cols=170  Identities=15%  Similarity=0.101  Sum_probs=117.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.........+...+++++|+..++++.+.+..                  ....|||+.++   .|+|
T Consensus        76 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i---vH~D  152 (327)
T 3lxl_A           76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC---VHRD  152 (327)
T ss_dssp             HHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE---ECSC
T ss_pred             HHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCC
Confidence            36677888777655444444456778899999988888775422                  11346776655   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++.++.+||+|||.+........  .......++.. |+|||++.+    ..++.++|+||+|+++|+|++|.
T Consensus       153 ikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~~ll~g~  227 (327)
T 3lxl_A          153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF-WYAPESLSD----NIFSRQSDVWSFGVVLYELFTYC  227 (327)
T ss_dssp             CSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGG-GSCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             CChhhEEECCCCCEEEcccccceecccCCccceeeccCCcccc-ccCHHHhcc----CCCChHHhHHHHHHHHHHHHhCC
Confidence            669999999999999999999876543221  11222456666 999999987    67889999999999999999999


Q ss_pred             CCCCCCCC-------------c-HHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGS-------------P-FEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~-------------~-~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.....             . ......+..+..++. +..+|+++++++++
T Consensus       228 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  279 (327)
T 3lxl_A          228 DKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA-PPACPAEVHELMKL  279 (327)
T ss_dssp             CGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCccccchhhhhcccccccccHHHHHHHhhcccCCCC-CCcccHHHHHHHHH
Confidence            99865110             1 112222334444444 55689999988763

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1.2e-23  Score=160.40  Aligned_cols=146  Identities=20%  Similarity=0.190  Sum_probs=101.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC----CCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++.. .++....    ...+++++++..+ ++.+.+..                .++.|||+.+++   |
T Consensus        77 ~~l~~l~h~niv~~-~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---H  151 (364)
T 3qyz_A           77 KILLRFRHENIIGI-NDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL---H  151 (364)
T ss_dssp             HHHHHCCCTTBCCC-CEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEE---C
T ss_pred             HHHHhcCCCCCccc-eeEEecCCccccceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCee---c
Confidence            36778888887643 3333222    2567899998774 55543211                113477777655   5


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhh--cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIR--GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      +|+||+||+++.++.+||+|||.+..........  ....+|++. |+|||++..   ...++.++|+||+||++|+|++
T Consensus       152 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~---~~~~~~~~DiwslG~il~ell~  227 (364)
T 3qyz_A          152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW-YRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS  227 (364)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGG-GCCHHHHHT---BCSCSTHHHHHHHHHHHHHHHH
T ss_pred             CCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccC-CCCCHHhcC---CCCCCcchhHHHHHHHHHHHHH
Confidence            5566999999999999999999997665432211  122578888 999998764   1457899999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHH
Q psy17162        141 GRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i  158 (182)
                      |.+||.+ ....+.+..+
T Consensus       228 g~~pf~~-~~~~~~~~~i  244 (364)
T 3qyz_A          228 NRPIFPG-KHYLDQLNHI  244 (364)
T ss_dssp             SSCSSCC-SSGGGHHHHH
T ss_pred             CCCCCCC-CChHHHHHHH
Confidence            9999988 3444444444

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.90  E-value=1.5e-23  Score=165.35  Aligned_cols=136  Identities=15%  Similarity=0.131  Sum_probs=102.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.+.+++++..+..+.. +....+++|++. .+++.+.+..                  ..+.|||+.+++   |+|
T Consensus        54 ~il~~L~~~~~i~~i~~~~~-~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv---HrD  128 (483)
T 3sv0_A           54 KIYRILQGGTGIPNVRWFGV-EGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL---HRD  128 (483)
T ss_dssp             HHHHHTTTSTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHHHhcCCCCCCeEEEEEe-eCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe---ecc
Confidence            46778888888777666655 566778999988 6666664321                  123477777655   555


Q ss_pred             CCCCcEEE---cCCCeEEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         65 FSVDTFHQ---RLQFLLHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        65 lk~~nil~---~~~~~~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      |||+|||+   +.++.+||+|||+++.........      .....|+.. |+|||++.+    ..++.++|||||||++
T Consensus       129 IKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~-Y~aPE~~~~----~~~s~~sDvwSlGvil  203 (483)
T 3sv0_A          129 IKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR-YASVNTHLG----IEQSRRDDLESLGYVL  203 (483)
T ss_dssp             CCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTT-TCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred             cCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCcc-ccCHHHhcC----CCCChHHHHHHHHHHH
Confidence            66999999   578999999999997655432210      113567888 999999988    7889999999999999


Q ss_pred             HHHHhCCCCCCCC
Q psy17162        136 IELATGRFPYDTW  148 (182)
Q Consensus       136 ~~l~~g~~pf~~~  148 (182)
                      |+|++|..||.+.
T Consensus       204 ~elltG~~Pf~~~  216 (483)
T 3sv0_A          204 MYFLRGSLPWQGL  216 (483)
T ss_dssp             HHHHHSSCTTSSC
T ss_pred             HHHHhCCCCCccc
Confidence            9999999999873

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.90  E-value=9e-24  Score=158.68  Aligned_cols=143  Identities=17%  Similarity=0.144  Sum_probs=99.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecC--CCceEEEeccCccchHHHHHHH----------------HHHHHHhhc-------chh
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTD--DKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDY-------HLC   58 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~-------~~~   58 (182)
                      +++.++|+|++..+.......  ...+++++|+..++++.+.+..                ....|||+.       |..
T Consensus        71 ~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~  150 (322)
T 3soc_A           71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP  150 (322)
T ss_dssp             TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEEC
T ss_pred             HHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCC
Confidence            355678888775554443322  3457899999999888776421                123477776       111


Q ss_pred             cccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCC-CCCCccchHHHHHHHHH
Q psy17162         59 VRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNP-SNYDIRSDVWSLGISLI  136 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~-~~~~~~~Diwslg~~l~  136 (182)
                      ++.|+|+||+||+++.++.+||+|||++......... ......|++. |+|||++.+.... ..++.++||||+||++|
T Consensus       151 ~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~DiwslG~il~  229 (322)
T 3soc_A          151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR-YMAPEVLEGAINFQRDAFLRIDMYAMGLVLW  229 (322)
T ss_dssp             EEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGG-GCCHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCcc-ccCHhhcccccccCcCCCccchhHHHHHHHH
Confidence            4556666799999999999999999999665432211 1122567888 9999998751110 23446789999999999


Q ss_pred             HHHhCCCCCCC
Q psy17162        137 ELATGRFPYDT  147 (182)
Q Consensus       137 ~l~~g~~pf~~  147 (182)
                      +|++|..||.+
T Consensus       230 el~tg~~pf~~  240 (322)
T 3soc_A          230 ELASRCTAADG  240 (322)
T ss_dssp             HHHTTBTTSSS
T ss_pred             HHHhCCCCCCC
Confidence            99999999975

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.90  E-value=3.4e-23  Score=154.88  Aligned_cols=170  Identities=12%  Similarity=0.110  Sum_probs=113.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.. .+... +...+++++++..++++.+.+.                .  ....|||+.+++|   +|+
T Consensus        82 ~l~~l~h~~iv~~-~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H---~dl  156 (319)
T 2y4i_B           82 AYRQTRHENVVLF-MGACM-SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILH---KDL  156 (319)
T ss_dssp             GGTTCCCTTBCCC-CEEEE-CSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCC---CCC
T ss_pred             HHhcCCCCCEeEE-EEEEe-cCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc---cCC
Confidence            5667788777643 34444 3456889999988877766431                0  1234777776555   555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh----hhcccCCCCCCcccCccccCCCCC-----CCCCCccchHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI----IRGLYGADCDPNFIRPERIDPSGN-----PSNYDIRSDVWSLGISLI  136 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~----~~~~~~~~~~~~~~aPe~~~~~~~-----~~~~~~~~Diwslg~~l~  136 (182)
                      ||+||+++ ++.+||+|||++........    .......|+.. |+|||++.....     ...++.++|+||+|+++|
T Consensus       157 kp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~-y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~  234 (319)
T 2y4i_B          157 KSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC-HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWY  234 (319)
T ss_dssp             CSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGG-TSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHH
T ss_pred             ChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCccc-ccChHHhhhccccccccccCCCchhhHHHHHHHHH
Confidence            59999998 78999999999865432111    00112346677 999999874110     135678999999999999


Q ss_pred             HHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        137 ELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       137 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|++|..||.+ .........+..+..+..++..+|+++++++.+
T Consensus       235 el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  278 (319)
T 2y4i_B          235 ELHAREWPFKT-QPAEAIIWQMGTGMKPNLSQIGMGKEISDILLF  278 (319)
T ss_dssp             HHHHSSCSSSS-CCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHH
T ss_pred             HHHhCCCCCCC-CCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHH
Confidence            99999999988 455555666666666666555788888888753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.90  E-value=5.8e-23  Score=151.24  Aligned_cols=158  Identities=13%  Similarity=0.206  Sum_probs=110.6

Q ss_pred             HHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcchhcccc
Q psy17162          5 RAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYHLCVRST   62 (182)
Q Consensus         5 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~~~h~~~   62 (182)
                      +..+ +|+|++ .+.+... +...+++++|+..++++.+.+...                     +..|||+.+++   |
T Consensus        64 ~~~l~~h~~iv-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv---H  138 (289)
T 1x8b_A           64 HAVLGQHSHVV-RYFSAWA-EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV---H  138 (289)
T ss_dssp             HHHSCSCTTBC-CEEEEEE-ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEE---C
T ss_pred             HHHhCCCCCee-eeeeeee-cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEe---e
Confidence            4445 666665 4445444 456788999999888887754321                     13467776554   5


Q ss_pred             cCCCCCcEEEcCC-------------------CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC
Q psy17162         63 RYFSVDTFHQRLQ-------------------FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD  123 (182)
Q Consensus        63 ~~lk~~nil~~~~-------------------~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~  123 (182)
                      +|+||+||+++.+                   ..+||+|||.+........     ..++.. |+|||++..   ...++
T Consensus       139 ~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~-y~aPE~~~~---~~~~~  209 (289)
T 1x8b_A          139 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV-----EEGDSR-FLANEVLQE---NYTHL  209 (289)
T ss_dssp             SCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCC-----CCCCGG-GCCHHHHTT---CCTTH
T ss_pred             cCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccc-----cCCCcc-ccChhHhcC---CCCCC
Confidence            5566999999844                   4799999999876554322     457778 999999976   12556


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        124 IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .++|+||+||++|+|++|.+|+.. .   .....+..+..+.+ +..+|+++++++++
T Consensus       210 ~~~Di~slG~il~~l~~~~~~~~~-~---~~~~~~~~~~~~~~-~~~~~~~~~~li~~  262 (289)
T 1x8b_A          210 PKADIFALALTVVCAAGAEPLPRN-G---DQWHEIRQGRLPRI-PQVLSQEFTELLKV  262 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCSS-S---HHHHHHHTTCCCCC-SSCCCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHhcCCCCCcc-h---hHHHHHHcCCCCCC-CcccCHHHHHHHHH
Confidence            899999999999999999988755 1   33444555655656 56689999998863

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.90  E-value=6.1e-24  Score=163.84  Aligned_cols=155  Identities=15%  Similarity=0.235  Sum_probs=108.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++..+......+...+++++|+..++++.+.+..                    .+..|||+.++   .|
T Consensus        59 ~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i---vH  135 (396)
T 4eut_A           59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI---VH  135 (396)
T ss_dssp             HHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE---EC
T ss_pred             HHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE---EE
Confidence            36788888888755544444445578899999988877664310                    12347777765   45


Q ss_pred             cCCCCCcEEE----cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC----CCCCCccchHHHHHHH
Q psy17162         63 RYFSVDTFHQ----RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN----PSNYDIRSDVWSLGIS  134 (182)
Q Consensus        63 ~~lk~~nil~----~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~----~~~~~~~~Diwslg~~  134 (182)
                      +|+||+||++    +.++.+||+|||++........  .....|+.. |+|||++.....    ...++.++|+||+||+
T Consensus       136 ~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~i  212 (396)
T 4eut_A          136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEE-YLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (396)
T ss_dssp             CCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG--SSCSSSCCT-TCCHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred             CCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc--cccccCCcc-ccCHHHhhccccccccccCCCcHHHHHHHHHH
Confidence            5566999998    7778899999999977655443  233668888 999998753000    0245678999999999


Q ss_pred             HHHHHhCCCCCCCC---CCcHHHHHHHhhCCC
Q psy17162        135 LIELATGRFPYDTW---GSPFEQLKQVVQDDP  163 (182)
Q Consensus       135 l~~l~~g~~pf~~~---~~~~~~~~~i~~~~~  163 (182)
                      +|+|++|..||.+.   ....+.+..+..+.+
T Consensus       213 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p  244 (396)
T 4eut_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (396)
T ss_dssp             HHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred             HHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence            99999999999642   234566666666654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=159.88  Aligned_cols=154  Identities=14%  Similarity=0.094  Sum_probs=106.8

Q ss_pred             EeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccCCCCCcEEEcCCC--e
Q psy17162         19 SVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRYFSVDTFHQRLQF--L   77 (182)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~lk~~nil~~~~~--~   77 (182)
                      +....+...+++++|+. +++|.+.+..                   ....|||+.++   .|+|+||+||+++.++  .
T Consensus       124 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---vH~Dikp~NIl~~~~~~~~  199 (352)
T 2jii_A          124 GFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEY---VHGNVTAENIFVDPEDQSQ  199 (352)
T ss_dssp             EEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC---BCSCCCGGGEEEETTEEEE
T ss_pred             hccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCCCCCHHHEEEcCCCCce
Confidence            44444567889999998 8888776432                   11347777655   4555669999999988  8


Q ss_pred             EEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCc
Q psy17162         78 LHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP  151 (182)
Q Consensus        78 ~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~  151 (182)
                      +||+|||++.........      ......+++. |+|||++.+    ..++.++|+||+|+++|+|++|..||.+....
T Consensus       200 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          200 VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLE-FISMDLHKG----CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             EEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTT-TCCHHHHTT----CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             EEEecCcceeeccCCCccccccccccccccCCcc-ccCHHHHcc----CCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence            999999999776543221      0122467778 999999988    78899999999999999999999999874323


Q ss_pred             HHHHHHHh---hCCCCCCCC-----CCCCHHHHHHhhh
Q psy17162        152 FEQLKQVV---QDDPPRLPP-----GEFSSDFKDFITL  181 (182)
Q Consensus       152 ~~~~~~i~---~~~~~~~~~-----~~~s~~~~~~i~~  181 (182)
                      ...+....   ....+.++.     ..+|+++++++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  312 (352)
T 2jii_A          275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKV  312 (352)
T ss_dssp             HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHH
T ss_pred             HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHH
Confidence            33333222   222232322     1468888888753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=2.5e-23  Score=156.41  Aligned_cols=166  Identities=17%  Similarity=0.235  Sum_probs=115.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH------------------------HHHHHhhcchhc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL------------------------RCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------------------~~~~l~~~~~~h   59 (182)
                      +++.++|+|++. +.++.. +....++++|+..++++.+.+...                        ...|||+.++  
T Consensus        86 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i--  161 (327)
T 2yfx_A           86 IISKFNHQNIVR-CIGVSL-QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF--  161 (327)
T ss_dssp             HHHHCCCTTBCC-EEEEEC-SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred             HHhhCCCCCCCe-EEEEEc-CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe--
Confidence            567788877764 444444 455678999998887777654320                        1246776655  


Q ss_pred             ccccCCCCCcEEEcCC---CeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQ---FLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~---~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                       .|+|+||+||+++.+   ..+||+|||++........ .......++.. |+|||++..    ..++.++|+||+|+++
T Consensus       162 -~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il  235 (327)
T 2yfx_A          162 -IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFME----GIFTSKTDTWSFGVLL  235 (327)
T ss_dssp             -CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGG-GCCHHHHHH----CCCCHHHHHHHHHHHH
T ss_pred             -ecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcc-eeCHhHhcC----CCCCchhhHHHHHHHH
Confidence             455566999999844   4699999998754322211 01112345666 999999987    6788999999999999


Q ss_pred             HHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        136 IELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       136 ~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+|++ |..||.+ ....+....+..+..+.. +..+++.+++++++
T Consensus       236 ~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  280 (327)
T 2yfx_A          236 WEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ  280 (327)
T ss_dssp             HHHHTTSCCSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             HHHHcCCCCCCCC-cCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Confidence            99998 9999987 455555556666655544 56688999888753

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.89  E-value=3.2e-23  Score=161.37  Aligned_cols=134  Identities=15%  Similarity=0.087  Sum_probs=95.0

Q ss_pred             CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162         10 QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      +.|++. +.+... ....+++++|+... ++.+.+..                   ..+.|||+.++   .|+||||+||
T Consensus       158 ~~~iv~-~~~~~~-~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlKp~NI  231 (429)
T 3kvw_A          158 TMNVIH-MLENFT-FRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI---IHCDLKPENI  231 (429)
T ss_dssp             CSCBCC-EEEEEE-ETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTE---ECSCCSGGGE
T ss_pred             CcCEEE-EEeecc-cCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHe
Confidence            335543 334433 34667889998763 44443211                   11347777654   5555669999


Q ss_pred             EEcCCCe--EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162         71 HQRLQFL--LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus        71 l~~~~~~--~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      +++.++.  +||+|||++......    ....++++. |+|||++.+    ..++.++||||+||++|+|++|.+||.+ 
T Consensus       232 Ll~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlG~il~elltG~~pf~~-  301 (429)
T 3kvw_A          232 LLKQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRF-YRAPEVILG----ARYGMPIDMWSLGCILAELLTGYPLLPG-  301 (429)
T ss_dssp             EESSTTSCCEEECCCTTCEETTCC----CCSSCSCGG-GCCHHHHHT----BCCCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             EEccCCCcceEEeecccceecCCc----ccccCCCCC-ccChHHHhC----CCCCchHHHHhHHHHHHHHHhCCCCCCC-
Confidence            9999887  999999998654332    223678888 999999988    7889999999999999999999999988 


Q ss_pred             CCcHHHHHHHh
Q psy17162        149 GSPFEQLKQVV  159 (182)
Q Consensus       149 ~~~~~~~~~i~  159 (182)
                      ....+.+..+.
T Consensus       302 ~~~~~~l~~i~  312 (429)
T 3kvw_A          302 EDEGDQLACMI  312 (429)
T ss_dssp             SSHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            45555555443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.89  E-value=3.6e-23  Score=152.79  Aligned_cols=159  Identities=17%  Similarity=0.232  Sum_probs=107.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++. +.++.. +....++++|+..++++.+.+..                  ....|||+.+++   |+|+
T Consensus        65 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv---H~Dl  139 (289)
T 4fvq_A           65 MMSKLSHKHLVL-NYGVCV-CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLI---HGNV  139 (289)
T ss_dssp             HHHTSCCTTBCC-EEEEEC-CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCC
T ss_pred             HHHhCCCCCEeE-EEEEEE-eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeE---CCCc
Confidence            577788877764 444444 35567899999988888775421                  113477776654   5556


Q ss_pred             CCCcEEEcCCCe--------EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFL--------LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        66 k~~nil~~~~~~--------~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      ||+||+++.++.        +||+|||.+........     ..++.. |+|||++..   ...++.++|+||+|+++|+
T Consensus       140 kp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~-y~aPE~~~~---~~~~~~~~DiwslG~il~e  210 (289)
T 4fvq_A          140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI-----LQERIP-WVPPECIEN---PKNLNLATDKWSFGTTLWE  210 (289)
T ss_dssp             CGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHH-----HHHTTT-TSCHHHHHC---GGGCCHHHHHHHHHHHHHH
T ss_pred             CcceEEEecCCcccccccceeeeccCcccccccCccc-----cCCcCc-ccCHHHhCC---CCCCCchhHHHHHHHHHHH
Confidence            699999988876        99999999976655433     335566 999999875   1357789999999999999


Q ss_pred             HHhC-CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        138 LATG-RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |++| .+||.. ... ......... .+.+ +...+++++++++
T Consensus       211 l~~g~~~~~~~-~~~-~~~~~~~~~-~~~~-~~~~~~~l~~li~  250 (289)
T 4fvq_A          211 ICSGGDKPLSA-LDS-QRKLQFYED-RHQL-PAPKAAELANLIN  250 (289)
T ss_dssp             HHTTTCCTTTT-SCH-HHHHHHHHT-TCCC-CCCSSCTTHHHHH
T ss_pred             HHcCCCCCccc-cch-HHHHHHhhc-cCCC-CCCCCHHHHHHHH
Confidence            9995 556655 333 333333332 2333 3345677777664

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.89  E-value=1.3e-22  Score=154.45  Aligned_cols=143  Identities=13%  Similarity=0.103  Sum_probs=94.4

Q ss_pred             hHHHHhCCCCcEEEEEEeee---cCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT---TDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h   59 (182)
                      .+++.++|+|++.....+..   .....+++++++..+ ++.+.+                    .+  ..|||+.+++ 
T Consensus        81 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~--l~~lH~~~iv-  156 (362)
T 3pg1_A           81 RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLG--LHVLHEAGVV-  156 (362)
T ss_dssp             HHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHH--HHHHHHTTCC-
T ss_pred             HHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHH--HHHHHHCcCE-
Confidence            36778888888754333332   233467899999874 444432                    22  3477777655 


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                        |+|+||+||+++.++.+||+|||++........  .....+++. |+|||++.+   ...++.++|+||+||++|+|+
T Consensus       157 --H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~~l~  228 (362)
T 3pg1_A          157 --HRDLHPGNILLADNNDITICDFNLAREDTADAN--KTHYVTHRW-YRAPELVMQ---FKGFTKLVDMWSAGCVMAEMF  228 (362)
T ss_dssp             --CCCCCGGGEEECTTCCEEECCTTC-----------------CGG-GCCHHHHTT---CTTCCTHHHHHHHHHHHHHHH
T ss_pred             --ecCCChHHEEEcCCCCEEEEecCcccccccccc--cceecccce-ecCcHHhcC---CCCCCcHhHHHhHHHHHHHHH
Confidence              555669999999999999999999975444332  233567777 999998875   145789999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHH
Q psy17162        140 TGRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i  158 (182)
                      +|..||.+ ....+.+..+
T Consensus       229 ~g~~pf~~-~~~~~~~~~i  246 (362)
T 3pg1_A          229 NRKALFRG-STFYNQLNKI  246 (362)
T ss_dssp             HSSCSCCC-SSHHHHHHHH
T ss_pred             hCCCCCCC-CCHHHHHHHH
Confidence            99999988 4444554444

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.89  E-value=6.9e-23  Score=155.03  Aligned_cols=163  Identities=20%  Similarity=0.246  Sum_probs=113.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHH---------------------------HHHHHHHHHHhh-
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQK---------------------------ELETLRCIYIQD-   54 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------------~l~~~~~~~l~~-   54 (182)
                      .+++.++|+|++. +.++.. +...+++++|+..++++.+                           .+.++  .|||+ 
T Consensus        95 ~~l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~  170 (348)
T 2pml_X           95 QIITDIKNEYCLT-CEGIIT-NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF--SYIHNE  170 (348)
T ss_dssp             HHHTTCCCTTBCC-CSEEEE-SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHH--HHHHHT
T ss_pred             HHHHhCCCCCcce-EEEEEe-eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHH--HHHhcc
Confidence            3566778777764 334444 3467788888876544322                           22333  37887 


Q ss_pred             cchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC-CCCc-cchHHHHH
Q psy17162         55 YHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS-NYDI-RSDVWSLG  132 (182)
Q Consensus        55 ~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~-~~~~-~~Diwslg  132 (182)
                      .+++|+   |+||+||+++.++.+||+|||.+.......   .....++.. |+|||++..    . .++. ++|+||+|
T Consensus       171 ~~i~H~---dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~-y~aPE~~~~----~~~~~~~~~Di~slG  239 (348)
T 2pml_X          171 KNICHR---DVKPSNILMDKNGRVKLSDFGESEYMVDKK---IKGSRGTYE-FMPPEFFSN----ESSYNGAKVDIWSLG  239 (348)
T ss_dssp             SCEECC---CCCGGGEEECTTSCEEECCCTTCEECBTTE---ECSSCSCGG-GCCGGGGSS----CCCEEHHHHHHHHHH
T ss_pred             CCEeec---CCChHhEEEcCCCcEEEecccccccccccc---ccCCCCCcC-ccCchhhcC----CCCCCcchhhHHHHH
Confidence            665555   555999999999999999999987654432   223567777 999999987    4 5555 89999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCC------------------CCCCHHHHHHhhh
Q psy17162        133 ISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP------------------GEFSSDFKDFITL  181 (182)
Q Consensus       133 ~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~------------------~~~s~~~~~~i~~  181 (182)
                      +++|+|++|..||.+.....+....+..+. ..+|.                  ..+|+++++++++
T Consensus       240 ~il~~l~~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  305 (348)
T 2pml_X          240 ICLYVMFYNVVPFSLKISLVELFNNIRTKN-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKL  305 (348)
T ss_dssp             HHHHHHHHSSCSSCCSSCSHHHHHHHTSCC-CCCCCSSSSSTTTTCC--------CCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHhccC-cCCccchhhhhccccccccccchhhcCHHHHHHHHH
Confidence            999999999999988444356666655543 33432                  4578889888763

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.89  E-value=4.5e-23  Score=154.14  Aligned_cols=171  Identities=16%  Similarity=0.205  Sum_probs=107.8

Q ss_pred             HHHH-hCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAV-FNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++.. .+|+|++ .+.++.. +...+++++|+..++++.+.+..                 ....|||+.+++   |+|+
T Consensus        63 ~l~~~~~h~~i~-~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv---H~dl  137 (316)
T 2ac3_A           63 MLYQCQGHRNVL-ELIEFFE-EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA---HRDL  137 (316)
T ss_dssp             HHHHTCCCTTBC-CEEEEEE-ETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCC
T ss_pred             HHHHhcCCCCee-eEEEEEe-eCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCce---eCCC
Confidence            3444 4566665 4445544 45678999999988887765421                 123477777554   5556


Q ss_pred             CCCcEEEcCCCe---EEEeccCCCCCCCchhh------hhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHH
Q psy17162         66 SVDTFHQRLQFL---LHLFRFALSGNQDDLLI------IRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISL  135 (182)
Q Consensus        66 k~~nil~~~~~~---~kl~dfg~a~~~~~~~~------~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l  135 (182)
                      ||+||+++.++.   +||+|||++........      ......+|+.. |+|||++..... ...++.++|+||+||++
T Consensus       138 kp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~DiwslG~il  216 (316)
T 2ac3_A          138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE-YMAPEVVEAFSEEASIYDKRCDLWSLGVIL  216 (316)
T ss_dssp             CGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGG-GCCHHHHHHTSHHHHHHTTTHHHHHHHHHH
T ss_pred             CHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcC-ccChHHhhcccccccCCCcccccHhHHHHH
Confidence            699999998765   99999999876532211      01122457888 999999863000 02467899999999999


Q ss_pred             HHHHhCCCCCCCCCC--------------cHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        136 IELATGRFPYDTWGS--------------PFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~--------------~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      |+|++|..||.+...              .......+..+. ..+|.   ..+|+++++++++
T Consensus       217 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~  278 (316)
T 2ac3_A          217 YILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK-YEFPDKDWAHISCAAKDLISK  278 (316)
T ss_dssp             HHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC-CCCCHHHHTTSCHHHHHHHHH
T ss_pred             HHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccC-cccCchhcccCCHHHHHHHHH
Confidence            999999999987321              112233333443 34432   3678899998864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.89  E-value=1e-23  Score=161.15  Aligned_cols=145  Identities=14%  Similarity=0.093  Sum_probs=96.7

Q ss_pred             CceEEEeccCccchHHHHHHH------------------H------HHHHHhhcchhcccccCCCCCcEEEcCCCeEEEe
Q psy17162         26 KKVVLVTGKGEAEKVQKELET------------------L------RCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLF   81 (182)
Q Consensus        26 ~~~~~~~~~~~~~~l~~~l~~------------------~------~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~   81 (182)
                      ..++++||+.. +++.+.+..                  +      ...|||+.++   .|+||||+||+++.++.+||+
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i---vHrDikp~NIll~~~~~~kL~  236 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGL---VHGHFTPDNLFIMPDGRLMLG  236 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE---EETTCSGGGEEECTTSCEEEC
T ss_pred             eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC---ccCcCCHHHEEECCCCCEEEE
Confidence            34789999977 676664421                  0      1246776654   455566999999999999999


Q ss_pred             ccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHH-HHH---
Q psy17162         82 RFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQ-LKQ---  157 (182)
Q Consensus        82 dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~-~~~---  157 (182)
                      |||++........   . ..+++. |+|||++....  ..++.++|+||+||++|+|++|..||.+....... ...   
T Consensus       237 DFG~a~~~~~~~~---~-~~~t~~-y~aPE~~~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~  309 (371)
T 3q60_A          237 DVSALWKVGTRGP---A-SSVPVT-YAPREFLNAST--ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSL  309 (371)
T ss_dssp             CGGGEEETTCEEE---G-GGSCGG-GCCHHHHTCSE--EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCT
T ss_pred             ecceeeecCCCcc---C-ccCCcC-CcChhhccCCC--CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhh
Confidence            9999976654321   1 345566 99999986411  35789999999999999999999999873111000 000   


Q ss_pred             Hh-hCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        158 VV-QDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       158 i~-~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      .. ......++ +..+|+++++++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~li~~  335 (371)
T 3q60_A          310 RVPGTDSLAFGSCTPLPDFVKTLIGR  335 (371)
T ss_dssp             TSCCCCSCCCTTSSCCCHHHHHHHHH
T ss_pred             hhccccccchhhccCCCHHHHHHHHH
Confidence            00 11122222 23688999998863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.89  E-value=6.4e-23  Score=155.99  Aligned_cols=140  Identities=18%  Similarity=0.199  Sum_probs=99.8

Q ss_pred             HHHHhC-----CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhc
Q psy17162          4 IRAVFN-----QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h   59 (182)
                      +++.+.     |+|++ .+.+... ....+++++++. ++++.+.+..                   .++.|||+.++  
T Consensus        84 ~l~~l~~~~~~h~~iv-~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i--  158 (360)
T 3llt_A           84 ILKKIQNDDINNNNIV-KYHGKFM-YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL--  158 (360)
T ss_dssp             HHHHTCCCSTTGGGBC-CEEEEEE-ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE--
T ss_pred             HHHHhcccCCCCCCee-cccceee-ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe--
Confidence            455555     55555 4444444 345688999988 6666654321                   11347776654  


Q ss_pred             ccccCCCCCcEEEcC-------------------------CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccC
Q psy17162         60 RSTRYFSVDTFHQRL-------------------------QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERID  114 (182)
Q Consensus        60 ~~~~~lk~~nil~~~-------------------------~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~  114 (182)
                       .|+|+||+||+++.                         ++.+||+|||++.......    ....|++. |+|||++.
T Consensus       159 -vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~-y~aPE~~~  232 (360)
T 3llt_A          159 -THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQ-YRAPEVIL  232 (360)
T ss_dssp             -ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGG-GCCHHHHT
T ss_pred             -eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCccc-ccCcHHHc
Confidence             55556699999975                         7889999999997644322    23567888 99999998


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        115 PSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       115 ~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      +    ..++.++||||+||++|+|++|+.||.+ ....+.+..+.
T Consensus       233 ~----~~~~~~~DiwslG~il~ell~g~~pf~~-~~~~~~~~~~~  272 (360)
T 3llt_A          233 N----LGWDVSSDMWSFGCVLAELYTGSLLFRT-HEHMEHLAMME  272 (360)
T ss_dssp             T----CCCCTTHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHH
T ss_pred             C----CCCCCccchHHHHHHHHHHHHCCCCCCC-CcHHHHHHHHH
Confidence            8    7889999999999999999999999988 45545554443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.89  E-value=1.5e-22  Score=153.66  Aligned_cols=141  Identities=18%  Similarity=0.249  Sum_probs=94.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCC----CceEEEeccCccchHH-----------------HHHHHHHHHHHhhcchhccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDD----KKVVLVTGKGEAEKVQ-----------------KELETLRCIYIQDYHLCVRS   61 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~-----------------~~l~~~~~~~l~~~~~~h~~   61 (182)
                      .+++.++|+|++..+..+.....    ..+++++++... ++.                 +.+.++.  |||+.+++|+ 
T Consensus        75 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~--~LH~~~ivH~-  150 (353)
T 3coi_A           75 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKGLK--YIHSAGVVHR-  150 (353)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTSCCCHHHHHHHHHHHHHHHH--HHHHTTCCCS-
T ss_pred             HHHHhcCCCCcccHhheEecccccccceeEEEEeccccC-CHHHHhcCCCCHHHHHHHHHHHHHHHH--HHHHCCcccC-
Confidence            36777888887644333322221    235788887653 322                 2233444  8887765555 


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                        |+||+||+++.++.+||+|||++.......    ....+++. |+|||++.+   ...++.++|+||+||++|+|++|
T Consensus       151 --dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----~~~~~t~~-y~aPE~~~~---~~~~~~~~Di~slG~il~el~~g  220 (353)
T 3coi_A          151 --DLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVVTRW-YRAPEVILS---WMHYNQTVDIWSVGCIMAEMLTG  220 (353)
T ss_dssp             --SCCGGGEEECTTCCEEECSTTCTTC------------CCSBC-CSCHHHHSC---CSCCCTTHHHHHHHHHHHHHHHS
T ss_pred             --CCCHHHEeECCCCcEEEeecccccCCCCCc----cccccCcC-cCCHHHHhC---cCCCCchhhHHHHHHHHHHHHhC
Confidence              555999999999999999999997654332    22567778 999998875   14577899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHH
Q psy17162        142 RFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i  158 (182)
                      ..||.+ ....+.+..+
T Consensus       221 ~~pf~~-~~~~~~~~~i  236 (353)
T 3coi_A          221 KTLFKG-KDYLDQLTQI  236 (353)
T ss_dssp             SCSSBS-SCHHHHHHHH
T ss_pred             CCCCCC-CCHHHHHHHH
Confidence            999988 3444444443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.89  E-value=3.8e-23  Score=153.43  Aligned_cols=172  Identities=15%  Similarity=0.184  Sum_probs=108.4

Q ss_pred             hCCCCcEEEEEEee--ecCCCceEEEeccCccchHHHHHH----------------HHHHHHHhhcc-----hhcccccC
Q psy17162          8 FNQDEIGVTVSSVK--TTDDKKVVLVTGKGEAEKVQKELE----------------TLRCIYIQDYH-----LCVRSTRY   64 (182)
Q Consensus         8 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~----------------~~~~~~l~~~~-----~~h~~~~~   64 (182)
                      ++|+|++..+....  ..+...+++++|+..++++.+.+.                .....|||...     ..++.|+|
T Consensus        59 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  138 (301)
T 3q4u_A           59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRD  138 (301)
T ss_dssp             CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSC
T ss_pred             ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCC
Confidence            67888775543322  223456789999999988877531                01234777111     33455666


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCC--CCCccchHHHHHHHHHHHH
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPS--NYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~--~~~~~~Diwslg~~l~~l~  139 (182)
                      +||+||+++.++.+||+|||++.........   ......|++. |+|||++.+.....  .++.++|+||+||++|+|+
T Consensus       139 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~  217 (301)
T 3q4u_A          139 LKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR-YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA  217 (301)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGG-GCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccc-eeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHH
Confidence            6699999999999999999998654433221   0122468888 99999998721100  3446899999999999999


Q ss_pred             hC----------CCCCCCC---CCcHHHHHHHh--hCCCCCCCCC----CCCHHHHHHhh
Q psy17162        140 TG----------RFPYDTW---GSPFEQLKQVV--QDDPPRLPPG----EFSSDFKDFIT  180 (182)
Q Consensus       140 ~g----------~~pf~~~---~~~~~~~~~i~--~~~~~~~~~~----~~s~~~~~~i~  180 (182)
                      +|          ..||.+.   ...........  .+..+.+++.    ..++++.++++
T Consensus       218 tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  277 (301)
T 3q4u_A          218 RRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK  277 (301)
T ss_dssp             TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHH
T ss_pred             hhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHH
Confidence            99          8898652   12233333322  2333444322    23456777664

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.89  E-value=4.5e-23  Score=151.74  Aligned_cols=161  Identities=14%  Similarity=0.103  Sum_probs=112.1

Q ss_pred             hHHHHhCCCCcEEEEEEeee--------------cCCCceEEEeccCccchHHHHHHH-------------------HHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT--------------TDDKKVVLVTGKGEAEKVQKELET-------------------LRC   49 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~   49 (182)
                      .+++.++|+|++.....+..              .....+++++|+...+++.+.+..                   ...
T Consensus        56 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  135 (284)
T 2a19_B           56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV  135 (284)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence            36778888888755443322              124457899999988887775421                   113


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .|||+.++   .|+|+||+||+++.++.+||+|||++........  .....+++. |+|||++..    ..++.++|+|
T Consensus       136 ~~lH~~~i---~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~  205 (284)
T 2a19_B          136 DYIHSKKL---INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--RTRSKGTLR-YMSPEQISS----QDYGKEVDLY  205 (284)
T ss_dssp             HHHHHTTE---ECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC--CCCCCSCCT-TSCHHHHHC----SCCCTHHHHH
T ss_pred             HHHHhCCe---eeccCCHHHEEEcCCCCEEECcchhheecccccc--ccccCCccc-ccChhhhcc----CCCcchhhhH
Confidence            46776654   5555669999999999999999999876654332  233567778 999999987    6788999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+|+++|+|++|..|+..   .......+..+.   + +..++++++++++
T Consensus       206 slG~il~~l~~~~~~~~~---~~~~~~~~~~~~---~-~~~~~~~~~~li~  249 (284)
T 2a19_B          206 ALGLILAELLHVCDTAFE---TSKFFTDLRDGI---I-SDIFDKKEKTLLQ  249 (284)
T ss_dssp             HHHHHHHHHHSCCSSHHH---HHHHHHHHHTTC---C-CTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcchh---HHHHHHHhhccc---c-cccCCHHHHHHHH
Confidence            999999999999988754   112222222222   2 3457778887765

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.89  E-value=7.1e-23  Score=156.60  Aligned_cols=141  Identities=19%  Similarity=0.251  Sum_probs=95.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCC----ceEEEeccCccchHHH-----------------HHHHHHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDK----KVVLVTGKGEAEKVQK-----------------ELETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~-----------------~l~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++..+..+...+..    .+++++++... ++.+                 .+.++  .|||+.+++|+  
T Consensus        94 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~--  168 (371)
T 4exu_A           94 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQYLVYQMLKGL--KYIHSAGVVHR--  168 (371)
T ss_dssp             HHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTSCCCHHHHHHHHHHHHHHH--HHHHHTTCCCS--
T ss_pred             HHHhcCCCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHhhcCCCHHHHHHHHHHHHHHH--HHHHHCCCcCC--
Confidence            67778888876443333322211    24788888763 4433                 22333  37887765555  


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                       |+||+||+++.++.+||+|||.+.......    ....+++. |+|||++.+   ...++.++|+||+||++|+|++|.
T Consensus       169 -Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~----~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~il~el~~g~  239 (371)
T 4exu_A          169 -DLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVVTRW-YRAPEVILS---WMHYNQTVDIWSVGCIMAEMLTGK  239 (371)
T ss_dssp             -CCCGGGEEECTTCCEEECSTTCC------------CTTCCCT-TSCHHHHSC---CSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             -CcCHHHeEECCCCCEEEEecCcccccccCc----CCcccCcc-ccCHHHhcC---CCCCCcHHhHHHHHHHHHHHHhCC
Confidence             555999999999999999999997654332    23567888 999999875   146789999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHh
Q psy17162        143 FPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~  159 (182)
                      .||.+ ....+.+..+.
T Consensus       240 ~pf~~-~~~~~~~~~i~  255 (371)
T 4exu_A          240 TLFKG-KDYLDQLTQIL  255 (371)
T ss_dssp             CSCCC-SSHHHHHHHHH
T ss_pred             CCCCC-CChHHHHHHHH
Confidence            99988 45545555543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.89  E-value=3.3e-22  Score=149.35  Aligned_cols=169  Identities=16%  Similarity=0.214  Sum_probs=106.1

Q ss_pred             HHHHhCC-CCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQ-DEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.+ +++++.+.+... +...+++++|+ ..+++.+.+..                 .+..|||+.+++   |+|+
T Consensus        79 ~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv---H~dl  153 (313)
T 3cek_A           79 YLNKLQQHSDKIIRLYDYEI-TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV---HSDL  153 (313)
T ss_dssp             HHHHHGGGCTTBCCEEEEEE-CSSEEEEEECC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCC
T ss_pred             HHHhccccCCceEEEEEEee-cCCEEEEEEec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce---ecCC
Confidence            5666665 455556666655 45568888884 44555553311                 112377776554   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCC-------CCCCCccchHHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGN-------PSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~-------~~~~~~~~Diwslg~~l~~  137 (182)
                      ||+||+++ ++.+||+|||++......... ......+++. |+|||.+.....       ...++.++|+||+|+++|+
T Consensus       154 kp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~e  231 (313)
T 3cek_A          154 KPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN-YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  231 (313)
T ss_dssp             CGGGEEEE-TTEEEECCCSSSCC--------------CCGG-GCCHHHHTTCC----------CCCHHHHHHHHHHHHHH
T ss_pred             CcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCC-cCCHHHHhhcccccccccccccCCchHHHHHHHHHHHH
Confidence            69999996 589999999999776443221 1122467778 999999864110       1357789999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhhC-CCCCCCCCCCCHHHHHHhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQD-DPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~~~~i~  180 (182)
                      |++|..||............+... ....+ +...+++++++++
T Consensus       232 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  274 (313)
T 3cek_A          232 MTYGKTPFQQIINQISKLHAIIDPNHEIEF-PDIPEKDLQDVLK  274 (313)
T ss_dssp             HHHSSCTTTTCCSHHHHHHHHHCTTSCCCC-CCCSCHHHHHHHH
T ss_pred             HHhCCCchhhHHHHHHHHHHHHhcccccCC-cccchHHHHHHHH
Confidence            999999998744444444444433 22334 4557888888876

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.89  E-value=1.3e-22  Score=152.64  Aligned_cols=168  Identities=16%  Similarity=0.170  Sum_probs=89.8

Q ss_pred             HHHHhC-CCCcEEEEEEee------ecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcc
Q psy17162          4 IRAVFN-QDEIGVTVSSVK------TTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYH   56 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~   56 (182)
                      +++.+. |+|++..+....      ......+++++++.. +++.+.+..                    ..+.|||+.+
T Consensus        78 ~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (337)
T 3ll6_A           78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK  156 (337)
T ss_dssp             HHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            566675 766664433332      134455778999886 455443321                    1134777765


Q ss_pred             hhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-----------hcccCCCCCCcccCccccCCCCCCCCCCcc
Q psy17162         57 LCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-----------RGLYGADCDPNFIRPERIDPSGNPSNYDIR  125 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-----------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~  125 (182)
                       ..+.|+|+||+||+++.++.+||+|||++.........           ......+++. |+|||++.... ...++.+
T Consensus       157 -~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~~~-~~~~~~~  233 (337)
T 3ll6_A          157 -PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM-YRTPEIIDLYS-NFPIGEK  233 (337)
T ss_dssp             -SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC--------------------------------CCT-TSCSSHH
T ss_pred             -CCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCC-cCChhhhhccc-cCCCChH
Confidence             01445556699999999999999999999775432210           0112457777 99999984211 1567889


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        126 SDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       126 ~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|+||+|+++|+|++|..||.+ ......    ..+.....++...++.++++++
T Consensus       234 ~Dv~slG~il~el~~g~~p~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~li~  283 (337)
T 3ll6_A          234 QDIWALGCILYLLCFRQHPFED-GAKLRI----VNGKYSIPPHDTQYTVFHSLIR  283 (337)
T ss_dssp             HHHHHHHHHHHHHHHSSCCC-----------------CCCCTTCCSSGGGHHHHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCcc-hhHHHh----hcCcccCCcccccchHHHHHHH
Confidence            9999999999999999999976 222222    2222122223456677777765

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.89  E-value=1.2e-22  Score=158.34  Aligned_cols=134  Identities=13%  Similarity=0.129  Sum_probs=89.4

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      +++.+ +|+|++ .+.+... +...+++++|++.+ ++.+.+                    .++  .|||+.+++|   
T Consensus        70 ~l~~l~~HpnIv-~l~~~~~-~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH---  141 (432)
T 3p23_A           70 LLRESDEHPNVI-RYFCTEK-DRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGL--AHLHSLNIVH---  141 (432)
T ss_dssp             HHHHSCCCTTBC-CEEEEEE-ETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHH--HHHHHTTCCC---
T ss_pred             HHHhccCCCCcC-eEEEEEe-cCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHH--HHHHHCcCEe---
Confidence            56667 566665 4445544 55667899998763 554432                    333  3788776555   


Q ss_pred             cCCCCCcEEEcC---C--CeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         63 RYFSVDTFHQRL---Q--FLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        63 ~~lk~~nil~~~---~--~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      +||||+||+++.   +  ..+||+|||++........  ......+|++. |+|||++..... ..++.++||||+||++
T Consensus       142 rDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~-y~APE~l~~~~~-~~~t~~~DiwSlG~il  219 (432)
T 3p23_A          142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG-WIAPEMLSEDCK-ENPTYTVDIFSAGCVF  219 (432)
T ss_dssp             CCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTT-SCCGGGTSCC----CCCTHHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcC-ccChhhhhcccc-cCCCcHHHHHHHHHHH
Confidence            555599999953   2  3578999999877653321  11233678888 999999874111 4567799999999999


Q ss_pred             HHHHh-CCCCCCC
Q psy17162        136 IELAT-GRFPYDT  147 (182)
Q Consensus       136 ~~l~~-g~~pf~~  147 (182)
                      |+|++ |..||..
T Consensus       220 ~ellt~g~~pf~~  232 (432)
T 3p23_A          220 YYVISEGSHPFGK  232 (432)
T ss_dssp             HHHHTTSCBTTBS
T ss_pred             HHHHcCCCCCcch
Confidence            99999 9999976

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.89  E-value=9.2e-23  Score=154.07  Aligned_cols=165  Identities=16%  Similarity=0.245  Sum_probs=91.7

Q ss_pred             HHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~   62 (182)
                      .++..+|+|++..+..+..  .+...+++++|+..++++.+.+..                   ....|||+.+++   |
T Consensus        75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~iv---H  151 (336)
T 3fhr_A           75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA---H  151 (336)
T ss_dssp             HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEE---C
T ss_pred             HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee---c
Confidence            3556777777654443332  224457899999998888775421                   123477777655   5


Q ss_pred             cCCCCCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         63 RYFSVDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        63 ~~lk~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      +|+||+||+++.+   +.+||+|||++........   ....+++. |+|||++..    ..++.++|+||+|+++|+|+
T Consensus       152 ~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~t~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~  223 (336)
T 3fhr_A          152 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL---QTPCYTPY-YVAPEVLGP----EKYDKSCDMWSLGVIMYILL  223 (336)
T ss_dssp             SCCSGGGEEESCSSTTCCEEECCCTTCEEC------------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHEEEEecCCCceEEEeccccceecccccc---ccCCCCcC-ccChhhhCC----CCCCchhhHHHHHHHHHHHH
Confidence            5566999999864   5599999999976554332   22567778 999999977    67889999999999999999


Q ss_pred             hCCCCCCCCCCcHHH----HHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        140 TGRFPYDTWGSPFEQ----LKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~----~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      +|..||.+. .....    ...+..+. ..++   ...+|+++++++++
T Consensus       224 ~g~~pf~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~  270 (336)
T 3fhr_A          224 CGFPPFYSN-TGQAISPGMKRRIRLGQ-YGFPNPEWSEVSEDAKQLIRL  270 (336)
T ss_dssp             HSSCCC-----------------------CCCTTTSTTCCHHHHHHHHH
T ss_pred             HCCCCCCCc-cchhhhhhHHHhhhccc-cccCchhhccCCHHHHHHHHH
Confidence            999999762 22111    11111111 1121   24688999998863

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.88  E-value=2e-22  Score=148.86  Aligned_cols=164  Identities=20%  Similarity=0.253  Sum_probs=113.8

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++.. .++.. +...+++++++..++++.+.+..                 ....+||+.+++|   +|+|
T Consensus        74 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H---~dl~  148 (287)
T 2wei_A           74 LLKKLDHPNIMKL-FEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH---RDLK  148 (287)
T ss_dssp             HHHTCCCTTBCCE-EEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC---SCCC
T ss_pred             HHHhccCCCccEE-EEEEe-CCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec---cCCC
Confidence            5677788777644 44444 45678899999888877664311                 1234777776555   5555


Q ss_pred             CCcEEEcCC---CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         67 VDTFHQRLQ---FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        67 ~~nil~~~~---~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+++.+   +.+||+|||++........  .....++.. |+|||.+.+     .++.++|+||+|+++|+|++|..
T Consensus       149 p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~-y~aPE~~~~-----~~~~~~Di~slG~~l~~l~~g~~  220 (287)
T 2wei_A          149 PENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAY-YIAPEVLRG-----TYDEKCDVWSAGVILYILLSGTP  220 (287)
T ss_dssp             GGGEEESCSSTTCCEEECSTTGGGTBCCCSS--CSCHHHHHT-TCCHHHHTT-----CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             hhhEEEecCCCcccEEEeccCcceeecCCCc--cccccCccc-ccChHHhcC-----CCCCchhhHhHHHHHHHHHhCCC
Confidence            999999764   4699999999876543322  111345566 999999875     47899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCC-CCC-CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPP-RLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~-~~~-~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+....+..+..+ +.+ ...+|+++++++++
T Consensus       221 p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          221 PFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (287)
T ss_dssp             SSCC-SSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHH
Confidence            9988 4555556666555322 222 24688999988763

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.88  E-value=3.8e-23  Score=155.43  Aligned_cols=169  Identities=15%  Similarity=0.110  Sum_probs=112.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.++|+|++.....+...+...+++++|+..++++.+.+..                  ....+||+.++   .|+|+
T Consensus        95 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~di  171 (326)
T 2w1i_A           95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDL  171 (326)
T ss_dssp             HHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE---eccCC
Confidence            5677888887654443334344578899999988887765421                  01346776654   55566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||+||+++.++.+||+|||++.........  ......++.. |+|||.+..    ..++.++|+||+|+++|+|++|..
T Consensus       172 kp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~tg~~  246 (326)
T 2w1i_A          172 ATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF-WYAPESLTE----SKFSVASDVWSFGVVLYELFTYIE  246 (326)
T ss_dssp             CGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             CcceEEEcCCCcEEEecCcchhhccccccccccccCCCCcee-EECchhhcC----CCCCchhhHHHHHHHHHHHHhcCC
Confidence            699999999999999999998765433210  0111345556 999999987    678899999999999999999999


Q ss_pred             CCCCCC----------Cc-H----HHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWG----------SP-F----EQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~----------~~-~----~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||....          .. .    .....+..+..++. +..+|+++++++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~  298 (326)
T 2w1i_A          247 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-PDGCPDEIYMIMTE  298 (326)
T ss_dssp             GGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCC-CCcccHHHHHHHHH
Confidence            986410          00 0    11122223333444 55688999988753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=3.3e-22  Score=150.54  Aligned_cols=134  Identities=14%  Similarity=0.103  Sum_probs=92.7

Q ss_pred             CCCCcEEEEEEeeecCC--CceEEEeccCccchHHHHHHH----------------HHHHHHhhcc-----hhcccccCC
Q psy17162          9 NQDEIGVTVSSVKTTDD--KKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYH-----LCVRSTRYF   65 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~-----~~h~~~~~l   65 (182)
                      +|+|++..+........  ..+++++|+..++++.+.+..                ....|||+..     ..++.|+|+
T Consensus        89 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Di  168 (337)
T 3mdy_A           89 RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDL  168 (337)
T ss_dssp             CCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCC
T ss_pred             cCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEeccc
Confidence            67777644433333222  678899999999888776421                1234777661     114556667


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhh---cccCCCCCCcccCccccCCCCCCCCCCcc------chHHHHHHHHH
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIR---GLYGADCDPNFIRPERIDPSGNPSNYDIR------SDVWSLGISLI  136 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~~~~~~~~------~Diwslg~~l~  136 (182)
                      ||+||+++.++.+||+|||++..........   .....|++. |+|||++..    ......      +||||+||++|
T Consensus       169 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~~~~~~~DiwslG~il~  243 (337)
T 3mdy_A          169 KSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR-YMPPEVLDE----SLNRNHFQSYIMADMYSFGLILW  243 (337)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGG-GCCHHHHTT----CCCTTCTHHHHHHHHHHHHHHHH
T ss_pred             chHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcc-eeChhhccc----ccCCccccCccccchHHHHHHHH
Confidence            7999999999999999999986654332211   122568888 999999987    444443      89999999999


Q ss_pred             HHHhC----------CCCCCC
Q psy17162        137 ELATG----------RFPYDT  147 (182)
Q Consensus       137 ~l~~g----------~~pf~~  147 (182)
                      +|++|          +.||..
T Consensus       244 el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          244 EVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTT
T ss_pred             HHHhccCcccccccccccHhh
Confidence            99999          777765

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.88  E-value=4.7e-22  Score=150.72  Aligned_cols=145  Identities=17%  Similarity=0.159  Sum_probs=98.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC----CCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++..+ ++...+    ...+++++++..+ ++.+.+..                ....|||+.+++   |
T Consensus        61 ~~l~~l~h~~iv~~~-~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv---H  135 (353)
T 2b9h_A           61 KILKHFKHENIITIF-NIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI---H  135 (353)
T ss_dssp             HHHHHCCCTTBCCEE-EECCCSCSTTCCCEEEEECCCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEE---C
T ss_pred             HHHHhCcCCCcCCee-eeecccccCccceEEEEEeccCc-cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCee---c
Confidence            367778888876443 333322    3668899999774 55553211                113477776554   5


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHH
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGI  133 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~  133 (182)
                      +|+||+||+++.++.+||+|||++.........         .....+|+.. |+|||++..   ...++.++|+||+||
T Consensus       136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~---~~~~~~~~Di~slG~  211 (353)
T 2b9h_A          136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW-YRAPEVMLT---SAKYSRAMDVWSCGC  211 (353)
T ss_dssp             SCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGG-GCCHHHHHS---CCCCCHHHHHHHHHH
T ss_pred             CCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhcccccc-ccCCeeecc---CCCccchhhHHHHHH
Confidence            556699999999999999999998765432210         0112467888 999998754   146789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCcHHHHHH
Q psy17162        134 SLIELATGRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       134 ~l~~l~~g~~pf~~~~~~~~~~~~  157 (182)
                      ++|+|++|.+||.+ ....+.+..
T Consensus       212 il~~l~~g~~pf~~-~~~~~~~~~  234 (353)
T 2b9h_A          212 ILAELFLRRPIFPG-RDYRHQLLL  234 (353)
T ss_dssp             HHHHHHHSSCSCCC-SSHHHHHHH
T ss_pred             HHHHHHhCCCCCCC-CCcHHHHHH
Confidence            99999999999988 344344433

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.88  E-value=2.1e-22  Score=157.05  Aligned_cols=137  Identities=12%  Similarity=0.148  Sum_probs=90.1

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------------H--HHHHHHhhcchh
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------------T--LRCIYIQDYHLC   58 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------------~--~~~~~l~~~~~~   58 (182)
                      +++.+ +|+|++ .+.+... +...+++++|++.+ ++.+.+.                      .  .+..|||+.++ 
T Consensus        61 ~l~~l~~HpnIv-~~~~~~~-~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-  136 (434)
T 2rio_A           61 LLTESDDHPNVI-RYYCSET-TDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI-  136 (434)
T ss_dssp             HHHHHTTSTTBC-CEEEEEE-CSSEEEEEECCCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTE-
T ss_pred             HHHhccCCCCcC-eEEEEEe-cCCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCc-
Confidence            45444 676665 4455544 56778899999753 5554321                      0  01247777655 


Q ss_pred             cccccCCCCCcEEEcCC-------------CeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCC---CC
Q psy17162         59 VRSTRYFSVDTFHQRLQ-------------FLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSG---NP  119 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~-------------~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~---~~  119 (182)
                        .|+|+||+||+++.+             +.+||+|||++.........   .....+|++. |+|||++.+..   ..
T Consensus       137 --vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~  213 (434)
T 2rio_A          137 --IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSG-WRAPELLEESNNLQTK  213 (434)
T ss_dssp             --ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCT-TSCHHHHSCCCTTSCC
T ss_pred             --cccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCC-ccCHHHhccccccccc
Confidence              455566999999754             48999999999776543221   1122568888 99999986411   11


Q ss_pred             CCCCccchHHHHHHHHHHHHh-CCCCCCC
Q psy17162        120 SNYDIRSDVWSLGISLIELAT-GRFPYDT  147 (182)
Q Consensus       120 ~~~~~~~Diwslg~~l~~l~~-g~~pf~~  147 (182)
                      ..++.++||||+||++|+|++ |..||.+
T Consensus       214 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          214 RRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             cCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence            457889999999999999999 9999976

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.88  E-value=3e-22  Score=150.20  Aligned_cols=156  Identities=15%  Similarity=0.176  Sum_probs=106.2

Q ss_pred             HHHHhCC-CCcEEEEEEeeecCCCceEEEeccCcc-chHHHHHHH-----------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQ-DEIGVTVSSVKTTDDKKVVLVTGKGEA-EKVQKELET-----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.+.+ +++++.+.++.. +...+++++++... +++.+.+..                 ..+.|||+.+++   |+|
T Consensus        99 ~l~~l~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv---H~D  174 (320)
T 3a99_A           99 LLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL---HRD  174 (320)
T ss_dssp             HHHHHCSSSCSBCCEEEEEE-CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHhhccCCCCceEEEEEEe-cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcE---eCC
Confidence            5666764 334445555555 44567788887664 666554321                 113477776655   555


Q ss_pred             CCCCcEEEc-CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQR-LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~-~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||+||+++ .++.+||+|||++........   ....++.. |+|||++..    ..+ +.++|+||+|+++|+|++|.
T Consensus       175 lkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~---~~~~gt~~-y~aPE~~~~----~~~~~~~~Di~slG~il~el~~g~  246 (320)
T 3a99_A          175 IKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRV-YSPPEWIRY----HRYHGRSAAVWSLGILLYDMVCGD  246 (320)
T ss_dssp             CSGGGEEEETTTTEEEECCCTTCEECCSSCB---CCCCSCGG-GSCHHHHHH----SCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             CCHHHEEEeCCCCCEEEeeCccccccccccc---cCCCCCcc-CCChHHhcc----CCCCCccchHHhHHHHHHHHHHCC
Confidence            559999999 679999999999876654322   22567888 999999876    444 58899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .||...  .     .+..+. ..+ +..+|++++++++
T Consensus       247 ~pf~~~--~-----~~~~~~-~~~-~~~~~~~~~~li~  275 (320)
T 3a99_A          247 IPFEHD--E-----EIIRGQ-VFF-RQRVSSECQHLIR  275 (320)
T ss_dssp             CSCCSH--H-----HHHHCC-CCC-SSCCCHHHHHHHH
T ss_pred             CCCCCh--h-----hhhccc-ccc-cccCCHHHHHHHH
Confidence            999761  1     122222 223 4567888888875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.88  E-value=5.9e-22  Score=147.98  Aligned_cols=147  Identities=19%  Similarity=0.253  Sum_probs=98.9

Q ss_pred             hHHHHhCCCCcEEEEEEeee------------cCCCceEEEeccCccchHHHHH------------------HHHHHHHH
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT------------TDDKKVVLVTGKGEAEKVQKEL------------------ETLRCIYI   52 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~l------------------~~~~~~~l   52 (182)
                      .+++.++|+|++..+..+..            .+...+++++|+.. +++.+.+                  .+  ..||
T Consensus        60 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~--l~~l  136 (320)
T 2i6l_A           60 KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRG--LKYI  136 (320)
T ss_dssp             HHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHH--HHHH
T ss_pred             HHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHH--HHHH
Confidence            36677888887654433211            23467789999987 3555532                  22  3477


Q ss_pred             hhcchhcccccCCCCCcEEEc-CCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         53 QDYHLCVRSTRYFSVDTFHQR-LQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        53 ~~~~~~h~~~~~lk~~nil~~-~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |+.+++|   +|+||+||+++ .++.+||+|||.+.........  ......++.. |+|||.+..   ...++.++|+|
T Consensus       137 H~~~i~H---~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~  209 (320)
T 2i6l_A          137 HSANVLH---RDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW-YRSPRLLLS---PNNYTKAIDMW  209 (320)
T ss_dssp             HHTTCBC---CCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCT-TCCHHHHHC---TTCCCHHHHHH
T ss_pred             HhCCEec---CCCCHHHEEEcCCCCeEEEccCccccccCCCccccccccccccccc-ccCcHHhcC---cccCCchhhhH
Confidence            7776555   55559999997 4679999999999765432110  1122455677 999998764   14678999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        130 SLGISLIELATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       130 slg~~l~~l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      |+|+++|+|++|..||.+ ....+....+..
T Consensus       210 slG~il~el~~g~~pf~~-~~~~~~~~~~~~  239 (320)
T 2i6l_A          210 AAGCIFAEMLTGKTLFAG-AHELEQMQLILE  239 (320)
T ss_dssp             HHHHHHHHHHHSSCSSCC-SSHHHHHHHHHH
T ss_pred             hHHHHHHHHHhCCCCCCC-CCHHHHHHHHHH
Confidence            999999999999999988 455455555443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.88  E-value=1.9e-22  Score=154.72  Aligned_cols=144  Identities=15%  Similarity=0.189  Sum_probs=101.6

Q ss_pred             HHHHhCCCC-----cEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhc
Q psy17162          4 IRAVFNQDE-----IGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h   59 (182)
                      +++.+++++     .++.+.+... ....+++++|+..+ ++.+.+..                   .+..|||.. -.+
T Consensus       103 ~l~~l~~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~  179 (382)
T 2vx3_A          103 LLELMNKHDTEMKYYIVHLKRHFM-FRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELS  179 (382)
T ss_dssp             HHHHHHHCSSGGGGGBCCEEEEEE-ETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTC
T ss_pred             HHHHHHhcccccceeEEEeeeeec-cCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCC
Confidence            455565443     2455555554 34678899998764 65554321                   012366631 234


Q ss_pred             ccccCCCCCcEEEc--CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQR--LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE  137 (182)
Q Consensus        60 ~~~~~lk~~nil~~--~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~  137 (182)
                      +.|+||||+||+++  .++.+||+|||++.......    ....+++. |+|||++.+    ..++.++||||+||++|+
T Consensus       180 ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~-y~aPE~~~~----~~~~~~~DiwSlG~il~e  250 (382)
T 2vx3_A          180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI----YQYIQSRF-YRSPEVLLG----MPYDLAIDMWSLGCILVE  250 (382)
T ss_dssp             EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCC----CSSCSCGG-GCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred             EEcCCCCcccEEEecCCCCcEEEEeccCceeccccc----ccccCCcc-ccChHHHcC----CCCCcHHHHHHHHHHHHH
Confidence            56777779999995  46789999999997654332    23678888 999999988    788999999999999999


Q ss_pred             HHhCCCCCCCCCCcHHHHHHHhh
Q psy17162        138 LATGRFPYDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       138 l~~g~~pf~~~~~~~~~~~~i~~  160 (182)
                      |++|.+||.+ ....+.+..+..
T Consensus       251 lltg~~pf~~-~~~~~~~~~i~~  272 (382)
T 2vx3_A          251 MHTGEPLFSG-ANEVDQMNKIVE  272 (382)
T ss_dssp             HHHSSCSSCC-SSHHHHHHHHHH
T ss_pred             HHhCCCCCCC-CCHHHHHHHHHH
Confidence            9999999998 455566666544

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.88  E-value=1.3e-22  Score=150.58  Aligned_cols=166  Identities=20%  Similarity=0.276  Sum_probs=108.7

Q ss_pred             HHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------------HHHHHHhhcchhc
Q psy17162          5 RAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------------~~~~~l~~~~~~h   59 (182)
                      ++.+.|+|++. +.+... +...+++++|+..++++.+.+..                         .+..|||+.+++ 
T Consensus        67 l~~l~h~~i~~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~-  143 (303)
T 2vwi_A           67 MSQCHHPNIVS-YYTSFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI-  143 (303)
T ss_dssp             CCCCCCTTBCC-EEEEEE-SSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HhhcCCCCEee-EEEEEe-ecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCC-
Confidence            44566777664 444444 34568899999888776665431                         113477776655 


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh----hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI----IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~----~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                        |+|+||+||+++.++.+||+|||.+........    .......+++. |+|||++..   ...++.++|+||+|+++
T Consensus       144 --H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~~~~~~Di~slG~il  217 (303)
T 2vwi_A          144 --HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC-WMAPEVMEQ---VRGYDFKADIWSFGITA  217 (303)
T ss_dssp             --CCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCT-TCCHHHHHH---HHCCCTHHHHHHHHHHH
T ss_pred             --CCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCcc-ccCHHHhcc---ccCCCchhhHHHHHHHH
Confidence              555669999999999999999998765433211    00122467788 999998863   13477899999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC--------CCCCCHHHHHHhh
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQVVQDDPPRLP--------PGEFSSDFKDFIT  180 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~--------~~~~s~~~~~~i~  180 (182)
                      |+|++|..||.+. ...........+..+.++        ...++++++++++
T Consensus       218 ~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  269 (303)
T 2vwi_A          218 IELATGAAPYHKY-PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMIS  269 (303)
T ss_dssp             HHHHHSSCTTTTS-CGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHH
T ss_pred             HHHHhCCCCCccC-chhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHH
Confidence            9999999999873 443444444444333221        1357788888776

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.88  E-value=3.8e-23  Score=155.24  Aligned_cols=136  Identities=17%  Similarity=0.102  Sum_probs=99.9

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcchhcccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~~h~~~   62 (182)
                      +++.++|+|++. +.++.. +....++++++..++++.+.+..                     ....|||+.+..++.|
T Consensus        80 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  157 (326)
T 3uim_A           80 MISMAVHRNLLR-LRGFCM-TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH  157 (326)
T ss_dssp             GGGTCCCTTBCC-CCEEEC-CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEEC
T ss_pred             HHHhccCCCccc-eEEEEe-cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Confidence            566777877764 344444 45567899999888777664310                     1234788872224555


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +|+||+||+++.++.+||+|||++...............|++. |+|||++..    ..++.++|+||+|+++|+|++|.
T Consensus       158 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~~l~~g~  232 (326)
T 3uim_A          158 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG-HIAPEYLST----GKSSEKTDVFGYGVMLLELITGQ  232 (326)
T ss_dssp             CCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGG-GCCHHHHHH----SEECHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcC-ccCHHHhcc----CCCCccccchhHHHHHHHHHhCC
Confidence            6666999999999999999999997654332221233557888 999999987    67889999999999999999999


Q ss_pred             CCCC
Q psy17162        143 FPYD  146 (182)
Q Consensus       143 ~pf~  146 (182)
                      .||.
T Consensus       233 ~pf~  236 (326)
T 3uim_A          233 RAFD  236 (326)
T ss_dssp             CSBC
T ss_pred             Cccc
Confidence            9995

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.87  E-value=9.5e-22  Score=145.72  Aligned_cols=166  Identities=16%  Similarity=0.143  Sum_probs=104.5

Q ss_pred             HHHHhCCCCcEEEEEEeee-----------cCCCceEEEeccCccchHHHHHHH------------------HHHHHHhh
Q psy17162          4 IRAVFNQDEIGVTVSSVKT-----------TDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQD   54 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~   54 (182)
                      +++.++|+|++.....+..           .+...+++++|+..++++.+.+..                  ....|||+
T Consensus        55 ~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~  134 (303)
T 1zy4_A           55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS  134 (303)
T ss_dssp             HHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh
Confidence            5667888888755443322           124667899999988887765421                  11347777


Q ss_pred             cchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-------------hhcccCCCCCCcccCccccCCCCCCCC
Q psy17162         55 YHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-------------IRGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        55 ~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-------------~~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                      .+++   |+|+||+||+++.++.+||+|||.+........             .......++.. |+|||++.+   ...
T Consensus       135 ~~i~---H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~---~~~  207 (303)
T 1zy4_A          135 QGII---HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM-YVATEVLDG---TGH  207 (303)
T ss_dssp             TTCC---CSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CT-TSCHHHHTS---CSC
T ss_pred             CCee---cccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCccc-ccCcccccC---CCC
Confidence            7655   555669999999999999999999876542210             01122467777 999999875   136


Q ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhh
Q psy17162        122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFIT  180 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~  180 (182)
                      ++.++|+||+||++|+|++   ||.......+....+... ...+|   +...++.++++++
T Consensus       208 ~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~  265 (303)
T 1zy4_A          208 YNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSV-SIEFPPDFDDNKMKVEKKIIR  265 (303)
T ss_dssp             CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHST-TCCCCTTCCTTTSHHHHHHHH
T ss_pred             CcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcccc-ccccCccccccchHHHHHHHH
Confidence            7899999999999999998   554312222333333322 22232   3356677888775

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.87  E-value=3.1e-22  Score=150.74  Aligned_cols=139  Identities=14%  Similarity=0.068  Sum_probs=93.3

Q ss_pred             HhCCCCcEEEEE---EeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcc------hhccc
Q psy17162          7 VFNQDEIGVTVS---SVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYH------LCVRS   61 (182)
Q Consensus         7 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~------~~h~~   61 (182)
                      .++|+|++..+.   .....+...+++++|+..++++.+.+..                ..+.|||+..      ..++.
T Consensus        63 ~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~iv  142 (336)
T 3g2f_A           63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS  142 (336)
T ss_dssp             TCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEE
T ss_pred             hccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhcccccccccee
Confidence            377888775543   2233344567899999999888775421                1234777761      01445


Q ss_pred             ccCCCCCcEEEcCCCeEEEeccCCCCCCCchh-------hhhcccCCCCCCcccCccccCCCCCC---CCCCccchHHHH
Q psy17162         62 TRYFSVDTFHQRLQFLLHLFRFALSGNQDDLL-------IIRGLYGADCDPNFIRPERIDPSGNP---SNYDIRSDVWSL  131 (182)
Q Consensus        62 ~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~-------~~~~~~~~~~~~~~~aPe~~~~~~~~---~~~~~~~Diwsl  131 (182)
                      |+|+||+||+++.++.+||+|||++.......       ........|+.. |+|||++.+....   ..++.++||||+
T Consensus       143 H~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~~Diwsl  221 (336)
T 3g2f_A          143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR-YMAPEVLEGAVNLRDXESALKQVDMYAL  221 (336)
T ss_dssp             CSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGG-GCCHHHHTTCCCGGGHHHHHHHHHHHHH
T ss_pred             ecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccc-eeCchhhcCCcccccccccccccchHHH
Confidence            66666999999999999999999997654221       111122568888 9999998751100   134467999999


Q ss_pred             HHHHHHHHhCCCCCC
Q psy17162        132 GISLIELATGRFPYD  146 (182)
Q Consensus       132 g~~l~~l~~g~~pf~  146 (182)
                      ||++|+|++|..||.
T Consensus       222 G~il~ell~g~~p~~  236 (336)
T 3g2f_A          222 GLIYWEIFMRCTDLF  236 (336)
T ss_dssp             HHHHHHHHTTBGGGS
T ss_pred             HHHHHHHHhcCCcCC
Confidence            999999999966553

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.87  E-value=1e-22  Score=152.24  Aligned_cols=171  Identities=18%  Similarity=0.107  Sum_probs=109.4

Q ss_pred             hHHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHHH---------------------HHHHHhhcchhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELETL---------------------RCIYIQDYHLCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~---------------------~~~~l~~~~~~h   59 (182)
                      .+++.++|+|++..+.....  .....+++++++...+++.+.+...                     ...|||+.++  
T Consensus        78 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i--  155 (317)
T 2buj_A           78 DMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY--  155 (317)
T ss_dssp             HHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE--
T ss_pred             HHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc--
Confidence            36777888887654433321  2345678999999888876654321                     1346777654  


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh--------hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI--------IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSL  131 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwsl  131 (182)
                       .|+|+||+||+++.++.+||+|||.+........        .......|+.. |+|||++..... ..++.++|+||+
T Consensus       156 -vH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~-~~~~~~~Di~sl  232 (317)
T 2buj_A          156 -AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS-YRAPELFSVQSH-CVIDERTDVWSL  232 (317)
T ss_dssp             -ECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGG-GCCGGGSSCCSE-EEECTHHHHHHH
T ss_pred             -ccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcc-cCCHhHhccCCC-cCCCchhhHHHH
Confidence             5555669999999999999999998866432110        00111345777 999999875110 235789999999


Q ss_pred             HHHHHHHHhCCCCCCCC---CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        132 GISLIELATGRFPYDTW---GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       132 g~~l~~l~~g~~pf~~~---~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+++|+|++|..||...   ...  ....+......+. +..+|+++++++++
T Consensus       233 G~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~li~~  282 (317)
T 2buj_A          233 GCVLYAMMFGEGPYDMVFQKGDS--VALAVQNQLSIPQ-SPRHSSALWQLLNS  282 (317)
T ss_dssp             HHHHHHHHHSSCTTHHHHHTTSC--HHHHHHCC--CCC-CTTSCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCChhhhhcccch--hhHHhhccCCCCc-cccCCHHHHHHHHH
Confidence            99999999999999541   111  1111122222222 34678888888753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.87  E-value=5.4e-22  Score=149.18  Aligned_cols=138  Identities=15%  Similarity=0.142  Sum_probs=96.6

Q ss_pred             HHHHhCCCC-----cEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhc
Q psy17162          4 IRAVFNQDE-----IGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h   59 (182)
                      +++.+++.+     .++.+.+... +...+++++|+. .+++.+.+..                   ..+.|||+.++  
T Consensus        64 ~l~~l~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i--  139 (339)
T 1z57_A           64 VLEHLNTTDPNSTFRCVQMLEWFE-HHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL--  139 (339)
T ss_dssp             HHHHHHHHCTTCTTCBCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE--
T ss_pred             HHHHhhhcCCCCceeeEeeecccc-cCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCC--
Confidence            445555543     2444455544 455788999987 5555553311                   11247777654  


Q ss_pred             ccccCCCCCcEEEcC-------------------CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC
Q psy17162         60 RSTRYFSVDTFHQRL-------------------QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS  120 (182)
Q Consensus        60 ~~~~~lk~~nil~~~-------------------~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~  120 (182)
                       .|+|+||+||+++.                   ++.+||+|||.+......    .....+++. |+|||++.+    .
T Consensus       140 -vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~-y~aPE~~~~----~  209 (339)
T 1z57_A          140 -THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRH-YRAPEVILA----L  209 (339)
T ss_dssp             -ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGG-GCCHHHHTT----S
T ss_pred             -cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc----cccccCCcc-ccChHHhhC----C
Confidence             55556699999987                   567999999998664332    223567888 999999987    7


Q ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHH
Q psy17162        121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLK  156 (182)
Q Consensus       121 ~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~  156 (182)
                      .++.++|+||+||++|+|++|..||.+ ....+...
T Consensus       210 ~~~~~~Di~slG~il~el~~g~~pf~~-~~~~~~~~  244 (339)
T 1z57_A          210 GWSQPCDVWSIGCILIEYYLGFTVFPT-HDSKEHLA  244 (339)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCC-SCHHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCC-CChHHHHH
Confidence            889999999999999999999999987 34434333

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.87  E-value=8e-23  Score=156.61  Aligned_cols=132  Identities=11%  Similarity=0.083  Sum_probs=91.0

Q ss_pred             eEEEeccCccchHHHHHHH------------------------HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEecc
Q psy17162         28 VVLVTGKGEAEKVQKELET------------------------LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRF   83 (182)
Q Consensus        28 ~~~~~~~~~~~~l~~~l~~------------------------~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~df   83 (182)
                      .+++||+.. +++.+.+..                        .++.|||+.+   +.|+|+||+||+++.++.+||+||
T Consensus       175 ~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DF  250 (377)
T 3byv_A          175 RFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGF  250 (377)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCG
T ss_pred             EEEEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEec
Confidence            678888884 566654431                        0124666665   555566699999999999999999


Q ss_pred             CCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC-----------CCCccchHHHHHHHHHHHHhCCCCCCCCCCcH
Q psy17162         84 ALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS-----------NYDIRSDVWSLGISLIELATGRFPYDTWGSPF  152 (182)
Q Consensus        84 g~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~-----------~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~  152 (182)
                      |++......    ....+| +. |+|||++..    .           .++.++|+||+||++|+|++|..||.+. ...
T Consensus       251 G~a~~~~~~----~~~~~g-~~-y~aPE~~~~----~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~  319 (377)
T 3byv_A          251 EHLVRDGAR----VVSSVS-RG-FEPPELEAR----RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKD-AAL  319 (377)
T ss_dssp             GGCEETTCE----EECCCC-TT-CCCHHHHHH----HTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             hhheecCCc----ccCCCC-cC-ccChhhhcc----cccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccc-ccc
Confidence            999764332    222566 66 999999987    5           6889999999999999999999999772 222


Q ss_pred             HHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        153 EQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       153 ~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .....+...      +..+|++++++++
T Consensus       320 ~~~~~~~~~------~~~~~~~~~~li~  341 (377)
T 3byv_A          320 GGSEWIFRS------CKNIPQPVRALLE  341 (377)
T ss_dssp             CCSGGGGSS------CCCCCHHHHHHHH
T ss_pred             cchhhhhhh------ccCCCHHHHHHHH
Confidence            222222211      1356788888775

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.86  E-value=1.6e-22  Score=151.62  Aligned_cols=132  Identities=15%  Similarity=0.182  Sum_probs=95.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-----------------------HHHHHHHHHhhcchhcc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-----------------------LETLRCIYIQDYHLCVR   60 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------l~~~~~~~l~~~~~~h~   60 (182)
                      +++.++|+|++. +.++.. +...+++++|+..++++.+.                       +.++  .|||+.+++  
T Consensus        88 ~l~~l~h~~iv~-~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l--~~lH~~~iv--  161 (321)
T 2qkw_B           88 TLSFCRHPHLVS-LIGFCD-ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL--HYLHTRAII--  161 (321)
T ss_dssp             GGGSCCCTTBCC-EEEECC-CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHH--HHHHHTTEE--
T ss_pred             HHHhCCCCCEee-EEEEEc-CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHH--HHhcCCCee--
Confidence            556677877764 444444 45567888888776554332                       2233  478776655  


Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                       |+|+||+||+++.++.+||+|||++......... ......|+.. |+|||++..    ..++.++|+||+|+++|+|+
T Consensus       162 -H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~Di~slG~il~ell  235 (321)
T 2qkw_B          162 -HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLG-YIDPEYFIK----GRLTEKSDVYSFGVVLFEVL  235 (321)
T ss_dssp             -CSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETT-TCCHHHHHH----CBCCTHHHHHHHHHHHHHHH
T ss_pred             -cCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCcc-ccCHHHhcC----CCCCcccchHhHHHHHHHHH
Confidence             4556699999999999999999998654322110 1122446777 999999987    67889999999999999999


Q ss_pred             hCCCCCCC
Q psy17162        140 TGRFPYDT  147 (182)
Q Consensus       140 ~g~~pf~~  147 (182)
                      +|..||.+
T Consensus       236 ~g~~p~~~  243 (321)
T 2qkw_B          236 CARSAIVQ  243 (321)
T ss_dssp             HCCTTCSC
T ss_pred             hCCCcccc
Confidence            99999976

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.86  E-value=8.8e-22  Score=148.99  Aligned_cols=138  Identities=14%  Similarity=0.109  Sum_probs=94.7

Q ss_pred             HHHHhCCCCc-----EEEEEEeeecCCCceEEEeccCccchHHHHHH-----------------H--HHHHHHhhcchhc
Q psy17162          4 IRAVFNQDEI-----GVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-----------------T--LRCIYIQDYHLCV   59 (182)
Q Consensus         4 il~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----------------~--~~~~~l~~~~~~h   59 (182)
                      +++.+.+.+.     ++.+.+... ....+++++|+... .+.+.+.                 .  ..+.|||+.++  
T Consensus        69 ~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i--  144 (355)
T 2eu9_A           69 VLKKIKEKDKENKFLCVLMSDWFN-FHGHMCIAFELLGK-NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL--  144 (355)
T ss_dssp             HHHHHHHHCTTSCSCBCCEEEEEE-ETTEEEEEEECCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTE--
T ss_pred             HHHHHhhcCCCCceeEEEeeeeee-eCCeEEEEEeccCC-ChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc--
Confidence            4455554331     344444444 35578899998744 3333211                 0  11247777655  


Q ss_pred             ccccCCCCCcEEE-------------------cCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCC
Q psy17162         60 RSTRYFSVDTFHQ-------------------RLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPS  120 (182)
Q Consensus        60 ~~~~~lk~~nil~-------------------~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~  120 (182)
                       .|+|+||+||++                   +.++.+||+|||++......    .....++.. |+|||++.+    .
T Consensus       145 -vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~-y~aPE~~~~----~  214 (355)
T 2eu9_A          145 -THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRH-YRPPEVILE----L  214 (355)
T ss_dssp             -ECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGG-GCCHHHHTT----C
T ss_pred             -ccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc----ccCCcCCCc-ccCCeeeec----C
Confidence             455566999999                   56788999999998664332    223578888 999999987    7


Q ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHH
Q psy17162        121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLK  156 (182)
Q Consensus       121 ~~~~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~  156 (182)
                      .++.++|+||+||++|+|++|..||.+ ....+.+.
T Consensus       215 ~~~~~~Di~slG~il~el~~g~~pf~~-~~~~~~~~  249 (355)
T 2eu9_A          215 GWAQPCDVWSIGCILFEYYRGFTLFQT-HENREHLV  249 (355)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCC-CCHHHHHH
Confidence            889999999999999999999999987 34434333

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.86  E-value=1.6e-22  Score=156.71  Aligned_cols=115  Identities=12%  Similarity=0.175  Sum_probs=80.8

Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC------CCCCCC
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG------NPSNYD  123 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~------~~~~~~  123 (182)
                      .|||+.+++   |+||||+||+++.++.+||+|||+++.....    ....+| +. |+|||++....      ....++
T Consensus       225 ~~LH~~~ii---HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~-y~aPE~~~~~~~~~~~~~~~~~~  295 (413)
T 3dzo_A          225 ASLHHYGLV---HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RG-FAPPETTAERMLPFGQHHPTLMT  295 (413)
T ss_dssp             HHHHHTTEE---CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TT-TCCHHHHHHHTSTTGGGCCEEEC
T ss_pred             HHHHhCCcc---cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-Cc-eeCchhhhccccccccccCcCCC
Confidence            377777655   5556699999999999999999998765544    223567 66 99999983100      015677


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        124 IRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .++|+||+||++|+|++|+.||.+. ........+...      ...+|++++++++
T Consensus       296 ~~~DvwSlGvil~elltg~~Pf~~~-~~~~~~~~~~~~------~~~~~~~~~~li~  345 (413)
T 3dzo_A          296 FAFDTWTLGLAIYWIWCADLPNTDD-AALGGSEWIFRS------CKNIPQPVRALLE  345 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCCTT-GGGSCSGGGGSS------CCCCCHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCc-chhhhHHHHHhh------cccCCHHHHHHHH
Confidence            8999999999999999999999872 222222222221      1246778888775

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.86  E-value=1.2e-21  Score=147.76  Aligned_cols=142  Identities=15%  Similarity=0.144  Sum_probs=96.1

Q ss_pred             HHHH--hCCCCcEEEEEEeeecCC---CceEEEeccCccchHHHHHHH----------------HHHHHHhhc-----ch
Q psy17162          4 IRAV--FNQDEIGVTVSSVKTTDD---KKVVLVTGKGEAEKVQKELET----------------LRCIYIQDY-----HL   57 (182)
Q Consensus         4 il~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~-----~~   57 (182)
                      ++..  ++|+|++.. .+....+.   ..+++++|+..++++.+.+..                ....|||..     +.
T Consensus        87 ~~~~~~l~h~ni~~~-~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~  165 (342)
T 1b6c_B           87 IYQTVMLRHENILGF-IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK  165 (342)
T ss_dssp             HHHHSCCCCTTBCCE-EEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB
T ss_pred             HHHHhhcCCCcEEEE-EeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            4444  677777644 44443333   378899999999888776422                123477711     02


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCC--CCCccchHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPS--NYDIRSDVWSLG  132 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~--~~~~~~Diwslg  132 (182)
                      .++.|+|+||+||+++.++.+||+|||++.........   ......++.. |+|||++.......  .++.++|+||+|
T Consensus       166 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~~~Di~slG  244 (342)
T 1b6c_B          166 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR-YMAPEVLDDSINMKHFESFKRADIYAMG  244 (342)
T ss_dssp             CEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGG-GCCHHHHTSCCCTTCHHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcc-cCCHhhhcccccccccccCCcccHHHHH
Confidence            34556666699999999999999999998664433211   1223567888 99999987621100  223689999999


Q ss_pred             HHHHHHHhC----------CCCCCC
Q psy17162        133 ISLIELATG----------RFPYDT  147 (182)
Q Consensus       133 ~~l~~l~~g----------~~pf~~  147 (182)
                      +++|+|++|          ..||..
T Consensus       245 ~il~el~tg~~~~~~~~~~~~p~~~  269 (342)
T 1b6c_B          245 LVFWEIARRCSIGGIHEDYQLPYYD  269 (342)
T ss_dssp             HHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             HHHHHHHhccCcCCcccccccCccc
Confidence            999999999          788866

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.86  E-value=2.3e-21  Score=144.70  Aligned_cols=150  Identities=17%  Similarity=0.199  Sum_probs=100.3

Q ss_pred             CCCCcEEEEEEeeecCCCceEEEecc-CccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCCcE
Q psy17162          9 NQDEIGVTVSSVKTTDDKKVVLVTGK-GEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      +|+|++ .+.++.. +....++++++ ...+++.+.+..                 ....|||+.++   .|+|+||+||
T Consensus        96 ~h~~i~-~~~~~~~-~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Ni  170 (312)
T 2iwi_A           96 GHPGVI-RLLDWFE-TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGV---VHRDIKDENI  170 (312)
T ss_dssp             CCSSBC-CEEEEC------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTE---ECCCCSGGGE
T ss_pred             CCCCee-eEEEEEe-cCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCChhhE
Confidence            676665 4444444 34556777777 667777665421                 11346776654   5555669999


Q ss_pred             EEc-CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162         71 HQR-LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus        71 l~~-~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      +++ .++.+||+|||++........   ....++.. |+|||++..    ..+ +.++|+||+|+++|+|++|..||.+.
T Consensus       171 l~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~-y~aPE~~~~----~~~~~~~~Di~slG~il~~l~~g~~pf~~~  242 (312)
T 2iwi_A          171 LIDLRRGCAKLIDFGSGALLHDEPY---TDFDGTRV-YSPPEWISR----HQYHALPATVWSLGILLYDMVCGDIPFERD  242 (312)
T ss_dssp             EEETTTTEEEECCCSSCEECCSSCB---CCCCSCTT-TSCHHHHHH----SCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             EEeCCCCeEEEEEcchhhhcccCcc---cccCCccc-ccCceeeec----CCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence            999 789999999999876654332   23567788 999999876    444 35899999999999999999999761


Q ss_pred             CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        149 GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       149 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                         .+    +... ...+ +..++++++++++
T Consensus       243 ---~~----~~~~-~~~~-~~~~~~~~~~li~  265 (312)
T 2iwi_A          243 ---QE----ILEA-ELHF-PAHVSPDCCALIR  265 (312)
T ss_dssp             ---HH----HHHT-CCCC-CTTSCHHHHHHHH
T ss_pred             ---HH----Hhhh-ccCC-cccCCHHHHHHHH
Confidence               11    2222 2334 3457888888775

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.85  E-value=1.8e-21  Score=144.83  Aligned_cols=133  Identities=16%  Similarity=0.210  Sum_probs=97.2

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcchhccccc
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +++.++|+|++.. .++.. +...+++++++..++++.+.+..                    ....|||+.++   .|+
T Consensus        83 ~l~~l~h~~i~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i---~H~  157 (307)
T 2nru_A           83 VMAKCQHENLVEL-LGFSS-DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHR  157 (307)
T ss_dssp             HHHHCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTE---ECS
T ss_pred             HHHhcCCCCeEEE-EEEEe-cCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCe---ecC
Confidence            6777888777644 44444 45568899999887777664420                    11346776654   555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |+||+||+++.++.+||+|||++......... ......|++. |+|||++.+     .++.++|+||+|+++|+|++|.
T Consensus       158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~-y~aPE~~~~-----~~~~~~Dv~slG~il~~l~~g~  231 (307)
T 2nru_A          158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTA-YMAPEALRG-----EITPKSDIYSFGVVLLEIITGL  231 (307)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGG-GCCHHHHTT-----EECTHHHHHHHHHHHHHHHHCC
T ss_pred             CCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcC-cCChHHhcC-----CCCccchhHHHHHHHHHHHHCC
Confidence            56699999999999999999998654432110 1122467778 999998865     4788999999999999999999


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      .||.+
T Consensus       232 ~p~~~  236 (307)
T 2nru_A          232 PAVDE  236 (307)
T ss_dssp             CSBCT
T ss_pred             CCccc
Confidence            99976

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.85  E-value=1.8e-23  Score=167.81  Aligned_cols=128  Identities=9%  Similarity=-0.141  Sum_probs=81.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH--------------HHHHHHhhcchhcccccCCCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET--------------LRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------------~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      ++|+.+.++.+++.+.+..+ ++..+|+||||..+++|.+.+..              .++.|+|+.+++|   |||||+
T Consensus       293 ~~l~~~~~~~~i~~~~~~~e-d~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIH---RDIKPe  368 (569)
T 4azs_A          293 KFLTQPPAGFDAPAVLAHGE-NAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWH---DDVRPW  368 (569)
T ss_dssp             HHHHSCCTTCCCCCEEEEEE-CSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEE---SCCCGG
T ss_pred             HHHHhcCCCCCeeEEEEEEE-ECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCcee---ccCchH
Confidence            36777877777777788877 67889999999999999886421              1123676666555   555599


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      |||++.+|.+||+|||+|+.......... ..+||+. |+|||++.+     .+..++|+||+|++.+++.++
T Consensus       369 NILL~~dg~vKL~DFGlAr~~~~~~~~~~-t~vGTp~-YmAPE~l~g-----~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          369 NVMVDARQHARLIDFGSIVTTPQDCSWPT-NLVQSFF-VFVNELFAE-----NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             GEEECTTSCEEECCCTTEESCC---CCSH-HHHHHHH-HHHHHHC----------------------CCCCTT
T ss_pred             hEEECCCCCEEEeecccCeeCCCCCcccc-Cceechh-hccHHHhCC-----CCCCcccccccccchhhhccc
Confidence            99999999999999999977654432212 2678888 999999876     456789999999987765443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=1.6e-21  Score=149.69  Aligned_cols=110  Identities=13%  Similarity=0.167  Sum_probs=83.4

Q ss_pred             CCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhc-chhcccccCCCCCcEEEcCCC------
Q psy17162         24 DDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDY-HLCVRSTRYFSVDTFHQRLQF------   76 (182)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~-~~~h~~~~~lk~~nil~~~~~------   76 (182)
                      +...+++++++.....+...                    +.+  +.|||+. ++   .|+||||+||+++.++      
T Consensus       116 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a--L~~lH~~~gi---vHrDikp~NIll~~~~~~~~~~  190 (397)
T 1wak_A          116 NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG--LDYLHTKCRI---IHTDIKPENILLSVNEQYIRRL  190 (397)
T ss_dssp             TEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHH--HHHHHHTTCE---ECCCCSGGGEEECCCHHHHHHH
T ss_pred             CCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHH--HHHHHHhCCE---ecCCCCHHHeeEeccchhhhhh
Confidence            45678899998744332221                    122  3477775 55   4555669999998775      


Q ss_pred             -------------------------------------------eEEEeccCCCCCCCchhhhhcccCCCCCCcccCcccc
Q psy17162         77 -------------------------------------------LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERI  113 (182)
Q Consensus        77 -------------------------------------------~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~  113 (182)
                                                                 .+||+|||.+.......    ....++.. |+|||++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~-y~aPE~~  265 (397)
T 1wak_A          191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQ-YRSLEVL  265 (397)
T ss_dssp             HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGG-GCCHHHH
T ss_pred             hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCc-ccCChhh
Confidence                                                       79999999997654432    22567888 9999999


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q psy17162        114 DPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       114 ~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      .+    ..++.++||||+||++|+|++|..||.+
T Consensus       266 ~~----~~~~~~~DiwslG~il~elltg~~pf~~  295 (397)
T 1wak_A          266 IG----SGYNTPADIWSTACMAFELATGDYLFEP  295 (397)
T ss_dssp             HT----SCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cC----CCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence            88    7789999999999999999999999976

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.84  E-value=8.4e-21  Score=153.84  Aligned_cols=134  Identities=16%  Similarity=0.207  Sum_probs=100.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeec-----CCCceEEEeccCccchHHHHHHH--------------------HHHHHHhhcch
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT-----DDKKVVLVTGKGEAEKVQKELET--------------------LRCIYIQDYHL   57 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~--------------------~~~~~l~~~~~   57 (182)
                      .+++.++|+|++.. .++...     +....++++|+..++++.+.+..                    .+..|||+.++
T Consensus        64 ~iL~~L~HpnIV~l-~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gI  142 (676)
T 3qa8_A           64 QIMKKLNHPNVVSA-REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRI  142 (676)
T ss_dssp             HHHHHCCBTTBCCE-EECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTB
T ss_pred             HHHHhCCCCCCCce-eeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            36778888887643 333221     35667899999988887765421                    12347777665


Q ss_pred             hcccccCCCCCcEEEcCCCe---EEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFL---LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~---~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      +|   +|+||+||+++.++.   +||+|||.+........  .....++.. |+|||++.+    ..++.++|+||+|++
T Consensus       143 VH---rDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~--~~~~~gt~~-Y~APE~l~~----~~~s~ksDIwSLGvi  212 (676)
T 3qa8_A          143 IH---RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTEFVGTLQ-YLAPELLEQ----KKYTVTVDYWSFGTL  212 (676)
T ss_dssp             CC---CCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC--CCCCCSCCT-TCSSCSSCC----SCCSTTHHHHHHHHH
T ss_pred             cc---CCCCHHHeEeecCCCceeEEEcccccccccccccc--cccccCCcc-cCChHHhcc----CCCCchhHHHHHHHH
Confidence            54   555699999997664   89999999977654432  233567888 999999987    788999999999999


Q ss_pred             HHHHHhCCCCCCC
Q psy17162        135 LIELATGRFPYDT  147 (182)
Q Consensus       135 l~~l~~g~~pf~~  147 (182)
                      +|+|++|..||.+
T Consensus       213 LyeLltG~~Pf~~  225 (676)
T 3qa8_A          213 AFECITGFRPFLP  225 (676)
T ss_dssp             HHHHHSSCSSCCS
T ss_pred             HHHHHHCCCCCCc
Confidence            9999999999976

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.83  E-value=7e-21  Score=145.16  Aligned_cols=125  Identities=14%  Similarity=0.203  Sum_probs=86.5

Q ss_pred             CCCcEEEEEEeeec--CCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhc-chhcccccCCCC
Q psy17162         10 QDEIGVTVSSVKTT--DDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDY-HLCVRSTRYFSV   67 (182)
Q Consensus        10 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~-~~~h~~~~~lk~   67 (182)
                      |+|++..+..+...  +...+++++++. .+++.+.+..                   .++.|||+. +++   |+||||
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~iv---H~Dikp  160 (373)
T 1q8y_A           85 ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGII---HTDIKP  160 (373)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEE---CSCCSG
T ss_pred             cchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEE---ecCCCh
Confidence            55555333322221  233677888887 5565554321                   113477775 554   555669


Q ss_pred             CcEEEc------CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         68 DTFHQR------LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        68 ~nil~~------~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +||+++      ..+.+||+|||++.......    ....+++. |+|||++.+    ..++.++|+||+||++|+|++|
T Consensus       161 ~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~-y~aPE~~~~----~~~~~~~Di~slG~il~el~~g  231 (373)
T 1q8y_A          161 ENVLMEIVDSPENLIQIKIADLGNACWYDEHY----TNSIQTRE-YRSPEVLLG----APWGCGADIWSTACLIFELITG  231 (373)
T ss_dssp             GGEEEEEEETTTTEEEEEECCCTTCEETTBCC----CSCCSCGG-GCCHHHHHT----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HHeEEeccCCCcCcceEEEcccccccccCCCC----CCCCCCcc-ccCcHHHhC----CCCCchHhHHHHHHHHHHHHhC
Confidence            999994      33489999999997654432    22567888 999999988    7789999999999999999999


Q ss_pred             CCCCCC
Q psy17162        142 RFPYDT  147 (182)
Q Consensus       142 ~~pf~~  147 (182)
                      ..||.+
T Consensus       232 ~~pf~~  237 (373)
T 1q8y_A          232 DFLFEP  237 (373)
T ss_dssp             SCCC--
T ss_pred             CCCCCC
Confidence            999986

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.82  E-value=9.1e-21  Score=155.17  Aligned_cols=128  Identities=16%  Similarity=0.178  Sum_probs=92.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCC---CceEEEeccCccchHHHH-----------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDD---KKVVLVTGKGEAEKVQKE-----------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~-----------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++..+..+...+.   ...+++||+..++++.+.                 +.++  .|+|+.+++|   
T Consensus       131 ~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL--~~lH~~giiH---  205 (681)
T 2pzi_A          131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPAL--SYLHSIGLVY---  205 (681)
T ss_dssp             GGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHH--HHHHHTTEEC---
T ss_pred             HHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHH--HHHHHCCCee---
Confidence            35677888887655443333222   126899999876665442                 2333  4787776555   


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      +||||+||+++.+ .+||+|||++......     ....|++. |+|||++..     .++.++||||+||++|+|++|.
T Consensus       206 rDlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~-y~aPE~~~~-----~~~~~sDi~slG~~l~~l~~g~  273 (681)
T 2pzi_A          206 NDLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPG-FQAPEIVRT-----GPTVATDIYTVGRTLAALTLDL  273 (681)
T ss_dssp             CCCSGGGEEECSS-CEEECCCTTCEETTCC-----SCCCCCTT-TSCTTHHHH-----CSCHHHHHHHHHHHHHHHHSCC
T ss_pred             cccChHHeEEeCC-cEEEEecccchhcccC-----CccCCCcc-ccCHHHHcC-----CCCCceehhhhHHHHHHHHhCC
Confidence            5556999999875 8999999998765443     22568888 999999875     3478999999999999999999


Q ss_pred             CCCCC
Q psy17162        143 FPYDT  147 (182)
Q Consensus       143 ~pf~~  147 (182)
                      +||.+
T Consensus       274 ~~~~~  278 (681)
T 2pzi_A          274 PTRNG  278 (681)
T ss_dssp             CEETT
T ss_pred             CCCcc
Confidence            99865

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.81  E-value=5.4e-21  Score=144.22  Aligned_cols=140  Identities=11%  Similarity=0.061  Sum_probs=91.8

Q ss_pred             CCceEEEeccCccchHHH------------------HHHHHHHHHHh-hcchhcccccCCCCCcEEEcCCC---------
Q psy17162         25 DKKVVLVTGKGEAEKVQK------------------ELETLRCIYIQ-DYHLCVRSTRYFSVDTFHQRLQF---------   76 (182)
Q Consensus        25 ~~~~~~~~~~~~~~~l~~------------------~l~~~~~~~l~-~~~~~h~~~~~lk~~nil~~~~~---------   76 (182)
                      ...++++||++.++++.+                  .+.++.  ||| +.++   .||||||+|||++.++         
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~--~lH~~~~i---vHrDlKp~NILl~~~~~~~~~~~~~  208 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLA--VAEASLRF---EHRDLHWGNVLLKKTSLKKLHYTLN  208 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHH--HHHHHHCC---BCSCCCGGGEEEEECSCSEEEEEET
T ss_pred             cCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHH--HHHHhCCE---eECCCCHHHEEEeccCCcceeeecc
Confidence            677889998865543211                  223333  777 6655   4555669999999887         


Q ss_pred             -----------eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH-HHHHHhCCCC
Q psy17162         77 -----------LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS-LIELATGRFP  144 (182)
Q Consensus        77 -----------~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~-l~~l~~g~~p  144 (182)
                                 .+||+|||+|+.....      ..+|++. |+|||++.+    .. +.++||||++++ .+++++|..|
T Consensus       209 ~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~-y~aPE~~~g----~~-~~~~Diwsl~~~~~~~~~~g~~p  276 (336)
T 2vuw_A          209 GKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV-SMDEDLFTG----DG-DYQFDIYRLMKKENNNRWGEYHP  276 (336)
T ss_dssp             TEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC-TTCSGGGCC----CS-SHHHHHHHHHHHHHTTCTTSCCT
T ss_pred             CccccccCCCceEEEeeccccEecCCC------cEEEeec-ccChhhhcC----CC-ccceehhhhhCCCCcccccccCC
Confidence                       8999999999765432      2468888 999999987    44 789999998777 6778889999


Q ss_pred             CCCCCCcHHHHHHHhhC---CCCCCC--CCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQD---DPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~---~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      |.+..........+...   .....+  +..+|+++++||++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  318 (336)
T 2vuw_A          277 YSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT  318 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred             CcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHH
Confidence            86511101122232221   111111  12477888988864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.78  E-value=1.8e-18  Score=128.45  Aligned_cols=144  Identities=17%  Similarity=0.243  Sum_probs=92.0

Q ss_pred             HHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhcccccC
Q psy17162          6 AVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +..+|+|++..+..+..  .+...+++++|+..++++.+.+..                   .+..|||+.++   .|+|
T Consensus        66 ~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~d  142 (299)
T 3m2w_A           66 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRD  142 (299)
T ss_dssp             HHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCC
Confidence            45567776644333322  245668899999988888775421                   12347777654   4555


Q ss_pred             CCCCcEEEcC---CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRL---QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~---~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +||+||+++.   ++.+||+|||++....                        .    ..++.++|+||+||++|+|++|
T Consensus       143 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------~----~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          143 VKPENLLYTSKRPNAILKLTDFGFAKETT------------------------G----EKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             CSGGGEEESSSSTTCCEEECCCTTCEECT------------------------T----CGGGGHHHHHHHHHHHHHHHHS
T ss_pred             CCHHHEEEecCCCCCcEEEeccccccccc------------------------c----ccCCchhhHHHHHHHHHHHHHC
Confidence            6699999998   7889999999873211                        1    3567889999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHH---hhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQV---VQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i---~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      ..||.+. .........   .......+++   ..+|+++++++++
T Consensus       195 ~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (299)
T 3m2w_A          195 YPPFYSN-HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN  239 (299)
T ss_dssp             SCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHH
T ss_pred             CCCCCCC-cchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHH
Confidence            9999772 222221111   1112222321   4678888888753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.75  E-value=2.7e-18  Score=126.91  Aligned_cols=139  Identities=12%  Similarity=0.055  Sum_probs=92.0

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------HHHHHHhhcchhcccccCCCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------LRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      ++..++|+|++ .+.++.. +...++++||+..++++.+.+..               ....|||+.+++|   +|+||+
T Consensus        84 ~l~~l~hp~iv-~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH---~Dikp~  158 (286)
T 3uqc_A           84 RLSRIDKPGVA-RVLDVVH-TRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVAL---SIDHPS  158 (286)
T ss_dssp             HHHTCCCTTBC-CEEEEEE-ETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC---CCCSGG
T ss_pred             HHhcCCCCCcc-eeeEEEE-ECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCcc---CCCCcc
Confidence            45667887765 4455555 35668899999988888775311               1134777776554   555699


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      ||+++.++.+||+++|                      |++           .++.++|+||+||++|+|++|+.||.+.
T Consensus       159 NIll~~~g~~kl~~~~----------------------~~~-----------~~~~~~Di~slG~il~elltg~~Pf~~~  205 (286)
T 3uqc_A          159 RVRVSIDGDVVLAYPA----------------------TMP-----------DANPQDDIRGIGASLYALLVNRWPLPEA  205 (286)
T ss_dssp             GEEEETTSCEEECSCC----------------------CCT-----------TCCHHHHHHHHHHHHHHHHHSEECSCCC
T ss_pred             cEEEcCCCCEEEEecc----------------------ccC-----------CCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence            9999999999998432                      332           3568899999999999999999999873


Q ss_pred             CCcHHHH---HHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        149 GSPFEQL---KQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       149 ~~~~~~~---~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                       ...+.+   .+...+..++..  +..+|+++++++.+
T Consensus       206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  242 (286)
T 3uqc_A          206 -GVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR  242 (286)
T ss_dssp             -SBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred             -CcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence             221211   111222222110  24688888888753

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.48  E-value=4.6e-15  Score=118.48  Aligned_cols=130  Identities=12%  Similarity=0.017  Sum_probs=91.9

Q ss_pred             hHHHHhCCCCcEE-EEEEeeecCCCceEEEeccCccchHHHHH-----------HHHHHHHHhhcchhcccccCCCCCcE
Q psy17162          3 SIRAVFNQDEIGV-TVSSVKTTDDKKVVLVTGKGEAEKVQKEL-----------ETLRCIYIQDYHLCVRSTRYFSVDTF   70 (182)
Q Consensus         3 ~il~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-----------~~~~~~~l~~~~~~h~~~~~lk~~ni   70 (182)
                      .+++.++|+|++. .+.+.   +....+++||+..++++.+.+           .++  .|||+.+++|   +|+||+||
T Consensus       391 ~il~~l~h~nIv~~~~~~~---~~~~~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL--~~LH~~gIiH---rDiKp~NI  462 (540)
T 3en9_A          391 RYLALVKDFGIPAPYIFDV---DLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIV--GKLHKNDVIH---NDLTTSNF  462 (540)
T ss_dssp             HHHHHGGGGTCCCCCEEEE---ETTTTEEEEECCCSEEHHHHSTTCTHHHHHHHHHH--HHHHHTTEEC---TTCCTTSE
T ss_pred             HHHHhcCCCCcCceEEEEE---eCCccEEEEECCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHCcCcc---CCCCHHHE
Confidence            3677888988872 22333   344569999999988887643           333  4888776555   55559999


Q ss_pred             EEcCCCeEEEeccCCCCCCCchhhhh------cccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         71 HQRLQFLLHLFRFALSGNQDDLLIIR------GLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        71 l~~~~~~~kl~dfg~a~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +++.  .+||+|||+++.........      ....+|++. |+|||++....  ..|+..+|+||...-..+-..+..+
T Consensus       463 Ll~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~-y~APEv~~~~~--~~Y~~~~d~ws~vl~~l~~v~~r~r  537 (540)
T 3en9_A          463 IFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHH-EKFDEIWERFL--EGYKSVYDRWEIILELMKDVERRAR  537 (540)
T ss_dssp             EESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCG-GGHHHHHHHHH--HHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred             EECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCC-cCCHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHhccc
Confidence            9998  99999999998876543211      122578888 99999987411  3466778999988877777766655


Q ss_pred             C
Q psy17162        145 Y  145 (182)
Q Consensus       145 f  145 (182)
                      |
T Consensus       538 Y  538 (540)
T 3en9_A          538 Y  538 (540)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.65  E-value=2.8e-08  Score=73.08  Aligned_cols=57  Identities=11%  Similarity=0.018  Sum_probs=41.7

Q ss_pred             CceEEEeccCccchHHH------------HHHHHHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         26 KKVVLVTGKGEAEKVQK------------ELETLRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        26 ~~~~~~~~~~~~~~l~~------------~l~~~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ...+++||+..++++.+            .+.++.  ++|+.+++|+   |+||+||+++ ++.+||+|||++..
T Consensus       173 ~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~--~lH~~giiHr---Dlkp~NILl~-~~~vkl~DFG~a~~  241 (282)
T 1zar_A          173 EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVA--KFYHRGIVHG---DLSQYNVLVS-EEGIWIIDFPQSVE  241 (282)
T ss_dssp             ETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHH--HHHHTTEECS---CCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred             cceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHH--HHHHCCCEeC---CCCHHHEEEE-CCcEEEEECCCCeE
Confidence            45688999987765543            233444  7877765555   5559999999 99999999998853

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.18  E-value=1.4e-06  Score=62.98  Aligned_cols=34  Identities=6%  Similarity=-0.110  Sum_probs=26.6

Q ss_pred             HHh-hcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCC
Q psy17162         51 YIQ-DYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQ   89 (182)
Q Consensus        51 ~l~-~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~   89 (182)
                      ++| ..++   .|+|+||+||+++.  .++|+|||+|...
T Consensus       185 ~lH~~~gi---vHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          185 RLYQEAEL---VHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHTSCE---ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHCCE---EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            676 6554   55556699999997  8999999998554

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.35  E-value=0.0001  Score=56.42  Aligned_cols=35  Identities=9%  Similarity=-0.105  Sum_probs=26.0

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCC----------eEEEeccCCCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQF----------LLHLFRFALSGN   88 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~----------~~kl~dfg~a~~   88 (182)
                      ++|..+   +.|+|+||.|||++.++          .+.|+||+-+-.
T Consensus       220 ~lH~~g---IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          220 RLAKHG---LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             HHHHTT---EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHCC---CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            676665   55556669999998776          388999986543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.31  E-value=0.00053  Score=48.86  Aligned_cols=29  Identities=3%  Similarity=-0.144  Sum_probs=23.7

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|+|++|.||+++.++.+.|+||+.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            56888889999998766667999998743

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.97  E-value=0.0031  Score=45.11  Aligned_cols=29  Identities=10%  Similarity=-0.002  Sum_probs=23.1

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|+|++|.||+++.++.+.|+||+.+..
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhccc
Confidence            46888889999998655567999997743

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.71  E-value=0.031  Score=41.94  Aligned_cols=30  Identities=13%  Similarity=0.069  Sum_probs=24.4

Q ss_pred             cccccCCCCCcEEEcCCCe--EEEeccCCCCC
Q psy17162         59 VRSTRYFSVDTFHQRLQFL--LHLFRFALSGN   88 (182)
Q Consensus        59 h~~~~~lk~~nil~~~~~~--~kl~dfg~a~~   88 (182)
                      ...|+|+++.||+++.++.  +.+.||+.+..
T Consensus       217 ~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          217 SIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             EEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             eEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            4578888899999997753  68999998865

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.23  E-value=0.0039  Score=45.77  Aligned_cols=85  Identities=14%  Similarity=0.096  Sum_probs=47.0

Q ss_pred             ccccCCCCCcEEEcC--CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccc----cCCCCCC------CCCCccch
Q psy17162         60 RSTRYFSVDTFHQRL--QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPER----IDPSGNP------SNYDIRSD  127 (182)
Q Consensus        60 ~~~~~lk~~nil~~~--~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~----~~~~~~~------~~~~~~~D  127 (182)
                      ..|+|++|.||+++.  .+.+.++||+.+............ .... . -..|+.    +......      .......+
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~-~~~~-~-~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~  269 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISL-MEDD-E-EYGMEFVSKILNHYKHKDIPTVLEKYRMKEK  269 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTT-CCTT-T-SCCHHHHHHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHH-Hhhc-c-ccCHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence            368888899999998  456789999987553221111011 0000 0 011111    1100000      00112257


Q ss_pred             HHHHHHHHHHHHhCCCCCCC
Q psy17162        128 VWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       128 iwslg~~l~~l~~g~~pf~~  147 (182)
                      .|+++.++|.+.+|..+|..
T Consensus       270 ~~~l~~~~~~~~~g~~~~~~  289 (304)
T 3sg8_A          270 YWSFEKIIYGKEYGYMDWYE  289 (304)
T ss_dssp             HHHHHHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHH
Confidence            89999999999999887743

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=89.23  E-value=0.59  Score=35.78  Aligned_cols=32  Identities=3%  Similarity=-0.194  Sum_probs=24.8

Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCC
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQD   90 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~   90 (182)
                      ....|.|+.+.||+++.++ +.++||+.+..-.
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            3445667779999998776 9999999886543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=89.09  E-value=0.19  Score=37.03  Aligned_cols=29  Identities=0%  Similarity=-0.120  Sum_probs=24.3

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|+|+.+.||+++.++.+.++||+.+..
T Consensus       224 l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          224 LCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             EECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             eecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            46777779999998788899999998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=86.12  E-value=0.43  Score=33.88  Aligned_cols=29  Identities=17%  Similarity=0.085  Sum_probs=23.8

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.++.+-|+||+.+..
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            35888889999999777677999998744

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=85.38  E-value=0.44  Score=34.86  Aligned_cols=29  Identities=17%  Similarity=-0.019  Sum_probs=23.6

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.++.+.++||+.+..
T Consensus       189 liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          189 VIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCCCCCCccCEEEeCCceEEEecchhccC
Confidence            46788889999998776668999998754

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=83.14  E-value=0.83  Score=33.37  Aligned_cols=28  Identities=21%  Similarity=0.140  Sum_probs=22.8

Q ss_pred             cccCCCCCcEEEcC---CCe-EEEeccCCCCC
Q psy17162         61 STRYFSVDTFHQRL---QFL-LHLFRFALSGN   88 (182)
Q Consensus        61 ~~~~lk~~nil~~~---~~~-~kl~dfg~a~~   88 (182)
                      .|+|+.+.|++++.   ++. +.|+||+.+..
T Consensus       193 ~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          193 IHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             ECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             EeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            68888899999987   355 48999998754

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=82.42  E-value=0.74  Score=33.90  Aligned_cols=30  Identities=10%  Similarity=-0.025  Sum_probs=24.3

Q ss_pred             ccccCCCCCcEEEcCC----CeEEEeccCCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQ----FLLHLFRFALSGNQ   89 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~----~~~kl~dfg~a~~~   89 (182)
                      ..|+|+.+.||+++.+    +.+.++||+.+..-
T Consensus       185 lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          185 FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             EECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            4678888999999874    67899999987553

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=82.39  E-value=0.56  Score=34.85  Aligned_cols=29  Identities=7%  Similarity=-0.146  Sum_probs=23.1

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.++.+.|+||+.+..
T Consensus       224 l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          224 LLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             EECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             EEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            45788889999999544578999998754

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=82.28  E-value=1.8  Score=31.28  Aligned_cols=28  Identities=11%  Similarity=0.035  Sum_probs=22.1

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.|++ ..++.+.++||..+..
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            456667799999 5567789999998754

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=81.87  E-value=2.4  Score=33.06  Aligned_cols=15  Identities=13%  Similarity=0.029  Sum_probs=11.9

Q ss_pred             CCCeEEEeccCCCCC
Q psy17162         74 LQFLLHLFRFALSGN   88 (182)
Q Consensus        74 ~~~~~kl~dfg~a~~   88 (182)
                      .++.+.|+||..+..
T Consensus       343 ~~~~l~lIDfEya~~  357 (458)
T 2qg7_A          343 EGDSISFIDFEYSCP  357 (458)
T ss_dssp             CCCCEEECCCTTCEE
T ss_pred             CCCeEEEEeecCCCC
Confidence            456799999988755

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=80.42  E-value=2.6  Score=31.95  Aligned_cols=29  Identities=14%  Similarity=-0.032  Sum_probs=23.9

Q ss_pred             ccccCCCCCcEEEcCC----CeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQ----FLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~----~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.+    +.+.++||..+..
T Consensus       222 ~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          222 FCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            4567777999999876    6899999998865

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=80.30  E-value=0.79  Score=35.38  Aligned_cols=29  Identities=10%  Similarity=-0.031  Sum_probs=22.4

Q ss_pred             ccccCCCCCcEEEcCC----------------------------CeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQ----------------------------FLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~----------------------------~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.+                            +.+.++||..+..
T Consensus       251 ~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~  307 (429)
T 1nw1_A          251 FCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY  307 (429)
T ss_dssp             EECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred             EEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence            4577777999999875                            6789999988755

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=80.26  E-value=1.1  Score=33.57  Aligned_cols=28  Identities=18%  Similarity=0.193  Sum_probs=21.9

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.+.||+++.++ +.++||..+..
T Consensus       214 l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          214 FCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             EEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            45777889999998655 89999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	182
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-14
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-13
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	7e-10
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-07
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-07
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.001
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	0.002

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.3 bits (164), Expect = 2e-14
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE I  + +   YD + DVWSLGI+ IELA  + P     +    L  + Q++ P
Sbjct: 175 PYWMAPEVI-LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESP 232

Query: 165 RLPPGEFSSDFKDFI 179
            L  G +S  F++F+
Sbjct: 233 ALQSGHWSEYFRNFV 247

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 2e-13
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)

Query: 105 PNFIRPERIDP-SGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDP 163
           P ++ PE +   +     YD ++DVWSLGI+LIE+A    P+    +P   L ++ + +P
Sbjct: 174 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE-LNPMRVLLKIAKSEP 232

Query: 164 PRLP-PGEFSSDFKDFI 179
           P L  P  +SS+FKDF+
Sbjct: 233 PTLAQPSRWSSNFKDFL 249

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 6e-13
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P F+ PE  +       YD   DV++ G+ ++E+AT  +PY    +  +  ++V     P
Sbjct: 177 PEFMAPEMYE-----EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 231

Query: 165 RLPPGEFSSDFKDFI 179
                    + K+ I
Sbjct: 232 ASFDKVAIPEVKEII 246

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 2e-12
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
           P ++ PE +        Y  + D+WSLGI  IE+  G  PY    +P   L  +  +  P
Sbjct: 180 PYWMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTP 234

Query: 165 RLP-PGEFSSDFKDFIT 180
            L  P + S+ F+DF+ 
Sbjct: 235 ELQNPEKLSAIFRDFLN 251

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 6e-12
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD 162
             P ++ PE++    N  +Y+ +SD+WSLG  L EL     P+  + S  E   ++ +  
Sbjct: 176 GTPYYMSPEQM----NRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGK 230

Query: 163 PPRLPPGEFSSDFKDFIT 180
             R+P   +S +  + IT
Sbjct: 231 FRRIPY-RYSDELNEIIT 247

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.3 bits (135), Expect = 2e-10
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD-- 162
             ++ PE+        + D RSDV+SLG  L E+ TG  P+    SP     Q V++D  
Sbjct: 178 AQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPVSVAYQHVREDPI 232

Query: 163 PPRLPPGEFSSDFKDFI 179
           PP       S+D    +
Sbjct: 233 PPSARHEGLSADLDAVV 249

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 3e-10
 Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 7/102 (6%)

Query: 78  LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE 137
           + +  F  +                    ++ PE +       +    SD+W+LG  + +
Sbjct: 147 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL----TEKSACKSSDLWALGCIIYQ 202

Query: 138 LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           L  G  P+   G+ +   +++++ +     P +F    +D +
Sbjct: 203 LVAGLPPFRA-GNEYLIFQKIIKLEYD--FPEKFFPKARDLV 241

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 55.1 bits (132), Expect = 4e-10
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 105 PNFIRPERI--DPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD 162
           P+++ PE I    + N   Y    D+WS G+ +  L  G  P+         L+ ++  +
Sbjct: 173 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-KQMLMLRMIMSGN 231

Query: 163 PPRLPP--GEFSSDFKDFI 179
                P   ++S   KD +
Sbjct: 232 YQFGSPEWDDYSDTVKDLV 250

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.0 bits (132), Expect = 5e-10
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 51  YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRP 110
           Y+ D  +  R  +  ++  +       + +  F LS  +D   ++    G    P ++ P
Sbjct: 122 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG---TPGYVAP 178

Query: 111 ERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPP-- 168
           E +        Y    D WS+G+    L  G  P+    +  +  +Q+++ +     P  
Sbjct: 179 EVLAQKP----YSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYW 233

Query: 169 GEFSSDFKDFI 179
            + S   KDFI
Sbjct: 234 DDISDSAKDFI 244

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 5e-10
 Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 81  FRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT 140
           F +++         + G        +++ PE I        +D + D+WSLG+   E   
Sbjct: 150 FGWSVHAPSSRRTTLCG------TLDYLPPEMI----EGRMHDEKVDLWSLGVLCYEFLV 199

Query: 141 GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           G+ P++   +  E  K++ + +     P   +   +D I
Sbjct: 200 GKPPFEAN-TYQETYKRISRVEFT--FPDFVTEGARDLI 235

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 5e-10
 Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD--PPRLPPGEFSSDFKDFI 179
               +D+WSLG  +  L +G  P+    +  + ++ ++  +         E S +  DF+
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAE-TNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 54.7 bits (131), Expect = 7e-10
 Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 10/105 (9%)

Query: 78  LHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE 137
           L L  F L+ + D     + +        F  PE  +           +D+WS+G+    
Sbjct: 165 LKLIDFGLTAHLDP---KQSVKVTTGTAEFAAPEVAEGKP----VGYYTDMWSVGVLSYI 217

Query: 138 LATGRFPYDTWGSPFEQLKQVVQDD--PPRLPPGEFSSDFKDFIT 180
           L +G  P+    +  E L+ V   D           S D KDFI 
Sbjct: 218 LLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 261

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 9e-10
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD-- 162
             ++ PE I    + + Y  +SDV++ GI L EL TG+ PY    +  +Q+  +V     
Sbjct: 170 ILWMAPEVIR-MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI-NNRDQIIFMVGRGYL 227

Query: 163 PPRLP--PGEFSSDFKDFI 179
            P L           K  +
Sbjct: 228 SPDLSKVRSNCPKAMKRLM 246

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 45/116 (38%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDT----------------- 147
            +++ PER+      ++Y ++SD+WS+G+SL+E+A GR+P                    
Sbjct: 167 RSYMSPERL----QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 222

Query: 148 ------------------------WGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
                                     + FE L  +V + PP+LP G FS +F+DF+
Sbjct: 223 AAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 278

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE +        +    DVWS GI L  +  G  P+D      ++     +    
Sbjct: 169 LPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 225

Query: 165 RLPPGEFSSDFKDFI 179
             P  +  S     +
Sbjct: 226 LNPWKKIDSAPLALL 240

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 4e-09
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL 181
           + I+SDVWS GI L EL T            E L QV +      PP E      D +  
Sbjct: 191 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP-ECPESLHDLMCQ 249

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 117 GNPSNYDIRSDVWSLGISLIELATGRFPY--DTWGSPFEQLKQVVQDDPPRLPPGEFSSD 174
           G  S +D   D WSLG+ + EL TG  P+  D   +   ++ + +    P  P  E S+ 
Sbjct: 204 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ-EMSAL 262

Query: 175 FKDFI 179
            KD I
Sbjct: 263 AKDLI 267

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 1e-08
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           Y+   D WS G+ L E+  G+ P+       E    +  D+P    P     + KD +
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRMDNPF--YPRWLEKEAKDLL 234

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 1e-08
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++  E +        +  +SDVWS G+ L EL T   P     + F+    ++Q    
Sbjct: 198 VKWMALESL----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 253

Query: 165 RLPPGEFSSDFKDFI 179
            L P        + +
Sbjct: 254 -LQPEYCPDPLYEVM 267

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD-- 162
             F  PE +D           +D+W++G+    L +G  P+       E L+ V + D  
Sbjct: 192 AEFAAPEIVDREP----VGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRCDWE 246

Query: 163 PPRLPPGEFSSDFKDFI 179
                    S + KDFI
Sbjct: 247 FDEDAFSSVSPEAKDFI 263

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 5/75 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             +  PE +        +  +SDVWS GI L E+ +            + + +V +    
Sbjct: 164 VKWTAPEAL----REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 219

Query: 165 RLPPGEFSSDFKDFI 179
             P G       + +
Sbjct: 220 DAPDG-CPPAVYEVM 233

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.3 bits (117), Expect = 5e-08
 Identities = 13/58 (22%), Positives = 23/58 (39%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           YD  +D +SLG  L +L  G  P+    +  +     +        P  FS + +  +
Sbjct: 183 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 7e-08
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 5/75 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             +  PE      + S Y  +SDVWS G+ + E+ +         S  E ++ +      
Sbjct: 166 VKWASPEVF----SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 221

Query: 165 RLPPGEFSSDFKDFI 179
             P    S+     +
Sbjct: 222 YKPR-LASTHVYQIM 235

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 9e-08
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           ++Y    D W LG+ + E+  GR P+  +    E+L +++  +  R P    S + K  +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPR-TLSPEAKSLL 236

Query: 180 T 180
            
Sbjct: 237 A 237

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 48.3 bits (114), Expect = 9e-08
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP-----FEQLKQVV 159
             ++                R D+ +LG   +    G  P+    +      +E++ +  
Sbjct: 177 ARYMSINTHLGRE----QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 232

Query: 160 QDDPPRLPPGEFSSDFKDFIT 180
           Q  P R     F  +F  ++ 
Sbjct: 233 QSTPLRELCAGFPEEFYKYMH 253

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 1e-07
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 107 FIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD--PP 164
           F+ PE +    N     + +D+WS+G+    L +G  P+    +  E L  V   +    
Sbjct: 182 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYEFE 236

Query: 165 RLPPGEFSSDFKDFI 179
                  S+  KDFI
Sbjct: 237 DEYFSNTSALAKDFI 251

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.2 bits (114), Expect = 1e-07
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 99  YGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQV 158
           Y     P++I PE +    +   Y+   D WS GI + E+  G  P+    +  +  +++
Sbjct: 159 YTLCGTPDYIAPEVV----STKPYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKI 213

Query: 159 VQDDPPRLPPGEFSSDFKDFI 179
           +  +     P  F+ D KD +
Sbjct: 214 LNAELR--FPPFFNEDVKDLL 232

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           Y  +SDVWS G+ L E+ T G  PY   G P E+L +++++      P   +++    +
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPYP--GVPVEELFKLLKEGHRMDKPSNCTNELYMMM 270

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 9/81 (11%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSP-----FEQLKQVV 159
             +         G       R D+ SLG  L+    G  P+    +      +E++ +  
Sbjct: 177 ARYASINTH--LGIE--QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 232

Query: 160 QDDPPRLPPGEFSSDFKDFIT 180
              P  +    + S+F  ++ 
Sbjct: 233 MSTPIEVLCKGYPSEFATYLN 253

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT 180
            Y   SDVW+ G+ L E+ +         +  E +  V   +    P      +  + + 
Sbjct: 218 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE-NCPLELYNLMR 276

Query: 181 L 181
           L
Sbjct: 277 L 277

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 118 NPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKD 177
           N   + I+SDVWS GI L E+ T         +  E ++ + +      P      +   
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN-CPEELYQ 241

Query: 178 FITL 181
            + L
Sbjct: 242 LMRL 245

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 2e-07
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           +   SD W  G++L E+ T G+ P+    +  + L ++ ++      P +   D  + +
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLPRPEDCPQDIYNVM 248

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 2e-07
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIE-LATGRFPYDTWGSPFEQLKQVVQDDP 163
             +  PE I    N   +  +SDVWS G+ + E  + G+ PY       E    + + + 
Sbjct: 174 VKWYAPECI----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-KGSEVTAMLEKGER 228

Query: 164 PRLPPGEFSSDFKDFI 179
              P G    +  D +
Sbjct: 229 MGCPAG-CPREMYDLM 243

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 2e-07
 Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 1/58 (1%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           +   SDVW  G+ + E+              + + ++   +   +PP          +
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP-NCPPTLYSLM 242

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 3e-07
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 118 NPSNYDIRSDVWSLGISLIE-LATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFK 176
           N   +  RSDVWS G+++ E L+ G+ PY       E +  + Q      PP E   +  
Sbjct: 185 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM-KGPEVMAFIEQGKRMECPP-ECPPELY 242

Query: 177 DFI 179
             +
Sbjct: 243 ALM 245

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 18/80 (22%), Positives = 27/80 (33%), Gaps = 5/80 (6%)

Query: 100 GADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVV 159
           G      +  PE I    +   +   SDVWS GI + E+ T         S  E +K + 
Sbjct: 172 GGKIPIRWTAPEAI----SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 227

Query: 160 QDDPPRLPPGEFSSDFKDFI 179
                  P  +  S     +
Sbjct: 228 DGFRLPTPM-DCPSAIYQLM 246

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 6e-07
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY--DTWGSPFEQLKQVV- 159
             P ++ PE +     P  YD   D+WSLG+ +  L  G  P+  +   +    +K  + 
Sbjct: 175 YTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 230

Query: 160 --QDDPPRLPPGEFSSDFKDFI 179
             Q + P     E S + K  I
Sbjct: 231 MGQYEFPNPEWSEVSEEVKMLI 252

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL 181
           + I+SDVW+ G+ L E+AT        G    Q+ ++++ D     P        + +  
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 2e-06
 Identities = 14/58 (24%), Positives = 24/58 (41%)

Query: 122 YDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           Y   SDVWS GI L EL +             +  +++++    L P    ++  D +
Sbjct: 224 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIM 281

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           +  +SD+W+ G+ + E+ + G+ PY+ + +  E  + + Q      P    S      +
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSETAEHIAQGLRLYRPH-LASEKVYTIM 234

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFI 179
           +   SDVWS GI + E+ + G  PY  W    + +   ++ D    PP +  S     +
Sbjct: 210 FTSASDVWSYGIVMWEVMSYGERPY--WDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 266

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD 162
             P  + PE I   G    Y+   D W+LG+ + E+A G  P+     P +  +++V   
Sbjct: 200 GTPEALAPEIILSKG----YNKAVDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGK 254

Query: 163 PPRLPPGEFSSDFKDFI 179
                P  FSSD KD +
Sbjct: 255 VR--FPSHFSSDLKDLL 269

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDP 163
             ++  E I        Y  +SDVWS G+++ EL T G  PYD  G P  ++  +++   
Sbjct: 177 IKWMALESI----LHRIYTHQSDVWSYGVTVWELMTFGSKPYD--GIPASEISSILEKGE 230

Query: 164 PRLPPGEFSSDFKDFIT 180
               P   + D    + 
Sbjct: 231 RLPQPPICTIDVYMIMV 247

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 3e-06
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 118 NPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKD 177
           N S Y   SDVWS G+ L E+ +         +  E  +++ Q      P      +  D
Sbjct: 199 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL-NCDDEVYD 257

Query: 178 FI 179
            +
Sbjct: 258 LM 259

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 7e-06
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             ++ PE +        +   SDVWS G+ L E+AT         S  + L+ V++    
Sbjct: 199 VRWMSPESL----KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 254

Query: 165 RLPPGEFSSDFKDFITL 181
             P         + + +
Sbjct: 255 DKPD-NCPDMLFELMRM 270

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 7e-06
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDP 163
             ++ PE +        Y I+SDVWS GI L E+ + G  PY           +++Q+  
Sbjct: 230 VKWMAPESL----FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGF 284

Query: 164 PRLPPGEFSSDFKDFI 179
               P   + +    +
Sbjct: 285 KMDQPFYATEEIYIIM 300

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ--DDPPRLPPGEFSSDFKDF 178
           +Y    DVWS G  L EL  G+  +    S  +QL ++++    P R    E + ++ +F
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFP-GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 257

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 12/76 (15%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDDPP 164
             +  PE I        +   + VWSLGI L ++  G         PFE  +++++    
Sbjct: 173 RVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDI-------PFEHDEEIIRGQV- 221

Query: 165 RLPPGEFSSDFKDFIT 180
                  SS+ +  I 
Sbjct: 222 -FFRQRVSSECQHLIR 236

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 105 PNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
             F  PE +    +   YD   D+WSLG  L  +   + P+      ++QL ++ +
Sbjct: 193 RYFKGPELLV---DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 245

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 7e-05
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
            Y +  D+W++G  L EL           S  +QL ++ +
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFLP-GDSDLDQLTRIFE 215

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 120 SNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
           S+Y    D+WS+G    E+   +  +    S  +QL +++ 
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRG-SSDVDQLGKILD 229

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 121 NYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
            Y    D+WS G    ELA    P        +QLK++ +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 118 NPSNYDIRSDVWSLGISLIELATGR--FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDF 175
              +Y    D+W  G  + E+ T       +T       + Q+     P + P   + + 
Sbjct: 195 GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYEL 254

Query: 176 KDFITL 181
            + + L
Sbjct: 255 YEKLEL 260

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 4e-04
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
               +  PE +        Y    D+WSLG    E+ T R  +    S  +QL ++ +
Sbjct: 164 VTLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFP-GDSEIDQLFRIFR 217

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 17/92 (18%)

Query: 105 PNFIRPERIDPSGNPSN--YDIRSDVWSLGISLIELATGRFPYDT-------------WG 149
             ++ PE +D S N  +     R+D++++G+   E+A                       
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235

Query: 150 SPFEQLKQVVQDD--PPRLPPGEFSSDFKDFI 179
              E++++VV +    P +P    S +    +
Sbjct: 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 103 CDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQ 160
               +  P+ +  S     Y    D+WS+G    E+  G   +    S  +QL ++ +
Sbjct: 162 VTLWYRAPDVLMGSKK---YSTTIDIWSVGCIFAEMVNGTPLFP-GVSEADQLMRIFR 215

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 118 NPSNYDIRSDVWSLGISLIELATGRFPYDTWGSPFEQLKQVVQDD---PPRLPPGEFSSD 174
           N  +Y+   D+WS+G  + EL TGR  +       +QLK +++        L     S  
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQLKLILRLVGTPGAELLKKISSES 250

Query: 175 FKDFI 179
            +++I
Sbjct: 251 ARNYI 255

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	182
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.98
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.98
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.98
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.94
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.94
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.94
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.93
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.93
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.93
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.92
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.92
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.92
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.91
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.91
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.8
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.46
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	86.5
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	86.25
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	85.26

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-34  Score=209.19  Aligned_cols=163  Identities=18%  Similarity=0.232  Sum_probs=126.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      ++++.++|+|++ .+.++.. +...++++|||+.++++.+.+..                 .+..|||+.++   .|||+
T Consensus        58 ~il~~l~hpnIv-~~~~~~~-~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~i---vHrDi  132 (263)
T d2j4za1          58 EIQSHLRHPNIL-RLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV---IHRDI  132 (263)
T ss_dssp             HHHHTCCCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCCCC
T ss_pred             HHHHhcCCCCCC-eEEEEEE-ECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeeee
Confidence            467788888876 4555555 56678999999999998875421                 12347777655   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+|........   ...+||+. |+|||++.+    ..++.++||||+||++|+|++|+.||
T Consensus       133 Kp~Nill~~~~~~kl~DFG~a~~~~~~~~---~~~~Gt~~-Y~APE~~~~----~~~~~~~DiwSlGvilyell~G~~Pf  204 (263)
T d2j4za1         133 KPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLD-YLPPEMIEG----RMHDEKVDLWSLGVLCYEFLVGKPPF  204 (263)
T ss_dssp             CGGGEEECTTSCEEECCCCSCSCCCCCCC---EETTEEGG-GCCHHHHTT----CCCCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccccceecCCCCEeecccceeeecCCCcc---cccCCCCc-ccCHHHHcC----CCCCchhhhhhHhHHHHHHhcCCCCC
Confidence            69999999999999999999977654432   23678888 999999998    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .+..+...++.++. +.+ |..+|+++++|+++
T Consensus       205 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  237 (263)
T d2j4za1         205 EA-NTYQETYKRISRVE-FTF-PDFVTEGARDLISR  237 (263)
T ss_dssp             CC-SSHHHHHHHHHTTC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHcCC-CCC-CccCCHHHHHHHHH
Confidence            88 45656666665554 556 56689999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-35  Score=213.05  Aligned_cols=170  Identities=16%  Similarity=0.178  Sum_probs=120.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------HHHHHHhhcch--hc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------LRCIYIQDYHL--CV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------~~~~~l~~~~~--~h   59 (182)
                      .+++.++|+|++.....+...++..++++|||+.+++|.+.+..                     .+..|||+.+.  ..
T Consensus        55 ~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~  134 (269)
T d2java1          55 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT  134 (269)
T ss_dssp             HHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             HHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            36777889888755544544566778999999999998775421                     11346776541  22


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                      +.|||+||+||+++.++.+||+|||+|+........ ....+||+. |+|||++.+    ..++.++||||+||++|+|+
T Consensus       135 IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~-~~~~~gt~~-Y~APE~l~~----~~~~~~~DIwSlGvilyel~  208 (269)
T d2java1         135 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKAFVGTPY-YMSPEQMNR----MSYNEKSDIWSLGCLLYELC  208 (269)
T ss_dssp             -----CCGGGEEECTTSCEEECCHHHHHHC------------CCCS-CCCHHHHTT----CCCCHHHHHHHHHHHHHHHH
T ss_pred             EEeCcCchhhcCcCCCCcEEEeeccceeecccCCCc-cccCCCCcc-cCCHHHHcC----CCCChHHHHHhhCHHHHHHh
Confidence            567778899999999999999999999776544332 223678998 999999987    78999999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        140 TGRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|+.||.+ .+..+...++..+..+.+ |..+|++++++++
T Consensus       209 tg~~Pf~~-~~~~~~~~~i~~~~~~~~-~~~~s~~l~~li~  247 (269)
T d2java1         209 ALMPPFTA-FSQKELAGKIREGKFRRI-PYRYSDELNEIIT  247 (269)
T ss_dssp             HSSCSCCC-SSHHHHHHHHHHTCCCCC-CTTSCHHHHHHHH
T ss_pred             hCCCCCCC-CCHHHHHHHHHcCCCCCC-CcccCHHHHHHHH
Confidence            99999998 566677777777776666 5678999999985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-34  Score=212.05  Aligned_cols=167  Identities=17%  Similarity=0.247  Sum_probs=128.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccccCCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      .+++.++|+|++. +.+... +...++++|||+.++++.+.+..                .+..|||+.+++   |||||
T Consensus        69 ~il~~l~HpnIv~-~~~~~~-~~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~ii---HrDiK  143 (293)
T d1yhwa1          69 LVMRENKNPNIVN-YLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVI---HRDIK  143 (293)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-ETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCCS
T ss_pred             HHHHhCCCCCEee-EeEEEE-ECCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCc---ccCCc
Confidence            4788899988764 444444 45678999999999998875311                123477777655   55556


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+||+++.++.+||+|||+|+........ ....+|++. |+|||++.+    ..++.++||||+||++|+|++|.+||.
T Consensus       144 p~NILl~~~~~vkl~DFG~a~~~~~~~~~-~~~~~gt~~-Y~aPE~~~~----~~~~~~~DiwSlGvilyemltG~~Pf~  217 (293)
T d1yhwa1         144 SDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPY-WMAPEVVTR----KAYGPKVDIWSLGIMAIEMIEGEPPYL  217 (293)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCGG-GCCHHHHSS----SCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             HHHeEECCCCcEeeccchhheeecccccc-ccccccCCC-ccChhhhcC----CCCCchhceehHhHHHHHHhhCCCCCC
Confidence            99999999999999999999876543322 233678998 999999988    788999999999999999999999998


Q ss_pred             CCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        147 TWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      + ....+.+..+..+..+.++ +..+|+++++||++
T Consensus       218 ~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  252 (293)
T d1yhwa1         218 N-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  252 (293)
T ss_dssp             T-SCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHH
Confidence            8 4666777777665545443 45789999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-34  Score=213.70  Aligned_cols=165  Identities=13%  Similarity=0.213  Sum_probs=126.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.+... +...++++||++.++++.+.+..                 .+..|+|+.+++   ||||
T Consensus        57 ~il~~l~hp~Iv-~l~~~~~-~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~ii---HRDl  131 (337)
T d1o6la_          57 RVLQNTRHPFLT-ALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV---YRDI  131 (337)
T ss_dssp             HHHHSCCCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCC
T ss_pred             HHHHhCCCCCEE-EEEeeec-cccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCcc---cccc
Confidence            477888887776 4445555 56779999999999998775321                 123467766555   5555


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+|||++.+|.+||+|||+|+........ ....+||+. |+|||++.+    ..|+.++|+||+||++|+|++|++||
T Consensus       132 KP~NILl~~~g~vkl~DFG~a~~~~~~~~~-~~~~~GT~~-Y~aPE~~~~----~~y~~~~DiwSlGvilyeml~G~~pf  205 (337)
T d1o6la_         132 KLENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPE-YLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBCSCCTTCC-BCCCEECGG-GCCGGGGSS----SCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHeEecCCCCEEEeecccccccccCCcc-cccceeCHH-HhhhhhccC----CCCChhhcccchhhHHHHHHHCCCCC
Confidence            599999999999999999999875443322 333789999 999999998    78999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .+..+....+..+. +.+ |..+|+++++||++
T Consensus       206 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~dli~~  238 (337)
T d1o6la_         206 YN-QDHERLFELILMEE-IRF-PRTLSPEAKSLLAG  238 (337)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-cCHHHHHHHHhcCC-CCC-CccCCHHHHHHHHh
Confidence            98 45555555565554 566 56799999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-34  Score=209.13  Aligned_cols=166  Identities=13%  Similarity=0.220  Sum_probs=125.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .|++.++|+|++. +.+... +...++++||++.++++.+.+..                 .+..|+|+.++   .|||+
T Consensus        60 ~il~~l~HpnIv~-l~~~~~-~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i---iHrDi  134 (288)
T d1uu3a_          60 DVMSRLDHPFFVK-LYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI---IHRDL  134 (288)
T ss_dssp             HHHHHCCSTTBCC-EEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHHHcCCCCeeE-EEEEEE-ECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccE---EcCcC
Confidence            4678889988774 445554 56778999999999998775321                 12246666654   55556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+||+++.++.+||+|||+|+....... ......+||+. |+|||++.+    ..++.++||||+||++|+|++|+.|
T Consensus       135 Kp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~-Y~APE~~~~----~~~~~~~DiwSlGvilyell~g~~P  209 (288)
T d1uu3a_         135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ-YVSPELLTE----KSACKSSDLWALGCIIYQLVAGLPP  209 (288)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECC----------CCCCGG-GCCHHHHHT----CCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CccccccCCCceEEecccccceecccCCcccccccccCCcc-ccCceeecc----CCCCcccceehhhHHHHHHhhCCCC
Confidence            69999999999999999999987653322 11233679999 999999988    7899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        145 YDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |.+ .+..+...++..+. +.+ |..+|+++++||++
T Consensus       210 f~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  243 (288)
T d1uu3a_         210 FRA-GNEYLIFQKIIKLE-YDF-PEKFFPKARDLVEK  243 (288)
T ss_dssp             SCC-SSHHHHHHHHHTTC-CCC-CTTCCHHHHHHHHT
T ss_pred             CCC-cCHHHHHHHHHcCC-CCC-CccCCHHHHHHHHH
Confidence            998 56667777776664 556 56789999999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-34  Score=210.00  Aligned_cols=171  Identities=23%  Similarity=0.313  Sum_probs=128.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.++|+|++. +.++.. +...++++||++.++++.+.+..                  .+..|||+.++   .|||
T Consensus        61 ~il~~l~HpnIv~-l~~~~~-~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~i---vHrD  135 (288)
T d2jfla1          61 DILASCDHPNIVK-LLDAFY-YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI---IHRD  135 (288)
T ss_dssp             HHHHHCCCTTBCC-EEEEEE-ETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHHhCCCCCCCe-EEEEEe-eCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---EEee
Confidence            4778899988764 444444 46678999999999998775311                  12347777654   5555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCC-CCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGN-PSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      +||+||+++.++.+||+|||+|......... ....+|++. |+|||++..... ...++.++||||+||++|+|++|++
T Consensus       136 iKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~-~~~~~Gt~~-y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~  213 (288)
T d2jfla1         136 LKAGNILFTLDGDIKLADFGVSAKNTRTIQR-RDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP  213 (288)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECHHHHHH-HTCCCSCCT-TCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSC
T ss_pred             cChhheeECCCCCEEEEechhhhccCCCccc-ccccccccc-cCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCC
Confidence            6699999999999999999999765544332 233788998 999999864211 2567899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCC-CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~~i~~  181 (182)
                      ||.+ ..+.+.+.++..+.++.++ +..+|+++++||++
T Consensus       214 Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~  251 (288)
T d2jfla1         214 PHHE-LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK  251 (288)
T ss_dssp             TTTT-SCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence            9998 4666777888877666554 45789999998863

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-33  Score=206.99  Aligned_cols=164  Identities=20%  Similarity=0.226  Sum_probs=127.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++.. +...++++||++.++.+...+                   .+  ..|||+.+++   ||
T Consensus        67 ~il~~l~HpnIv~~-~~~~~-~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~a--L~yLH~~~ii---Hr  139 (309)
T d1u5ra_          67 RFLQKLRHPNTIQY-RGCYL-REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG--LAYLHSHNMI---HR  139 (309)
T ss_dssp             HHHTTCCCTTBCCE-EEEEE-ETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHH--HHHHHHTTCB---CC
T ss_pred             HHHHHCCCCCEeeE-EEEEE-ECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHH--HHHHHhCCEe---cc
Confidence            36788888888744 44444 456789999999988875532                   22  3477777655   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||||+||+++.++.+||+|||+|.......     ..+||+. |+|||++.+... ..|+.++||||+||++|+|++|..
T Consensus       140 DiKp~NILl~~~~~~Kl~DFG~a~~~~~~~-----~~~GT~~-Y~APE~~~~~~~-~~y~~~~DiwSlGvilyel~~g~~  212 (309)
T d1u5ra_         140 DVKAGNILLSEPGLVKLGDFGSASIMAPAN-----SFVGTPY-WMAPEVILAMDE-GQYDGKVDVWSLGITCIELAERKP  212 (309)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCBSSSSBC-----CCCSCGG-GCCHHHHTTTTS-CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcceEEECCCCCEEEeecccccccCCCC-----ccccCcc-ccCHHHHhccCC-CCcCchhhhhhHHHHHHHHHHCCC
Confidence            556999999999999999999997755432     2678998 999999875221 468899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+.+.++..+..+.+++..+|+++++||++
T Consensus       213 Pf~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~  249 (309)
T d1u5ra_         213 PLFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  249 (309)
T ss_dssp             TTTT-SCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence            9988 566677788888777777677899999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-33  Score=202.77  Aligned_cols=169  Identities=17%  Similarity=0.190  Sum_probs=122.5

Q ss_pred             hHHHHhCCCCcEEEEEEeee--cCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT--TDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.++|+|++.....+..  .....++++||++.+++|.+.+..                 .+..|||+.+ ..+.||
T Consensus        60 ~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHr  138 (270)
T d1t4ha_          60 EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHR  138 (270)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCS
T ss_pred             HHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeC
Confidence            36788899888755443332  235668899999999998875421                 1234777765 014555


Q ss_pred             CCCCCcEEEc-CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         64 YFSVDTFHQR-LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        64 ~lk~~nil~~-~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||||+||+++ .++.+||+|||+|+.......   ...+||+. |+|||++.+     .++.++||||+||++|+|++|+
T Consensus       139 DiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~---~~~~GT~~-Y~aPE~~~~-----~~~~~~DIwSlGvilyel~~g~  209 (270)
T d1t4ha_         139 DLKCDNIFITGPTGSVKIGDLGLATLKRASFA---KAVIGTPE-FMAPEMYEE-----KYDESVDVYAFGMCMLEMATSE  209 (270)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCCTTSB---EESCSSCC-CCCGGGGGT-----CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcChhhceeeCCCCCEEEeecCcceeccCCcc---CCcccCcc-ccCHHHhCC-----CCCCcCchhhHHHHHHHHHHCC
Confidence            5669999996 478999999999976444322   23689999 999999865     5899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .||.+..........+..+..+...+..+++++++++++
T Consensus       210 ~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~  248 (270)
T d1t4ha_         210 YPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  248 (270)
T ss_dssp             CTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHH
Confidence            999874445455555656654433355788999998863

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.5e-33  Score=206.21  Aligned_cols=162  Identities=17%  Similarity=0.293  Sum_probs=126.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.+... +...++++||++.++++.+.+..                 .+..|+|+.++   .||||
T Consensus        56 ~il~~l~HpnIv-~~~~~~~-~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---iHrDi  130 (316)
T d1fota_          56 LMLSIVTHPFII-RMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI---IYRDL  130 (316)
T ss_dssp             HHHHSCCBTTBC-CEEEEEE-CSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE---ECCCC
T ss_pred             HHHHhccCcChh-heeeeEe-eCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcE---Ecccc
Confidence            367788888876 4455555 56789999999999887764311                 12346776654   45556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+|||++.++.+||+|||+|+......    ...+|++. |+|||++.+    ..++.++||||+||++|+|++|+.||
T Consensus       131 Kp~NILl~~~g~vkL~DFG~a~~~~~~~----~~~~Gt~~-Y~APE~l~~----~~y~~~~DiwSlGvilyemltG~~Pf  201 (316)
T d1fota_         131 KPENILLDKNGHIKITDFGFAKYVPDVT----YTLCGTPD-YIAPEVVST----KPYNKSIDWWSFGILIYEMLAGYTPF  201 (316)
T ss_dssp             CGGGEEECTTSCEEECCCSSCEECSSCB----CCCCSCTT-TCCHHHHTT----CCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             CchheeEcCCCCEEEecCccceEecccc----ccccCccc-ccCHHHHcC----CCCCchhhccccchhHHHHHhCCCCC
Confidence            6999999999999999999997765432    23789999 999999988    78999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ .+..+...++..+. ..+ |..+|+++++++++
T Consensus       202 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  234 (316)
T d1fota_         202 YD-SNTMKTYEKILNAE-LRF-PPFFNEDVKDLLSR  234 (316)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CC-cCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHH
Confidence            98 56667777777765 445 45689999998864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-32  Score=204.24  Aligned_cols=166  Identities=16%  Similarity=0.215  Sum_probs=113.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++. +.++.. ++..++++||++.+++|.+.+..                 .+..|||+.+++|+   |+
T Consensus        59 ~il~~l~HpnIv~-l~~~~~-~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHr---Di  133 (307)
T d1a06a_          59 AVLHKIKHPNIVA-LDDIYE-SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR---DL  133 (307)
T ss_dssp             HHHHTCCCTTBCC-EEEEEE-CSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CC
T ss_pred             HHHHhCCCCCCCc-EEEEEE-ECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeE---Ee
Confidence            4778888888764 455555 56778999999999999885411                 12347777765555   55


Q ss_pred             CCCcEEEc---CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         66 SVDTFHQR---LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        66 k~~nil~~---~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      ||+||++.   .++.+||+|||+|+.......  ....+||+. |+|||++.+    ..++.++||||+||++|+|++|+
T Consensus       134 Kp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~--~~~~~GT~~-y~APE~~~~----~~~~~~~DiwSlGvilyell~g~  206 (307)
T d1a06a_         134 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTPG-YVAPEVLAQ----KPYSKAVDCWSIGVIAYILLCGY  206 (307)
T ss_dssp             CGGGEEESSSSTTCCEEECCC--------------------CT-TSCHHHHTT----CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccceeecccCCCceEEEeccceeEEccCCCe--eeeeeeCcc-ccCcHHHcC----CCCCcHHHhhhhhHHHHHHHhCC
Confidence            59999995   468899999999977654432  233679999 999999988    78999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCC-C-CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRL-P-PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~-~-~~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+....+..+..... + +..+|+++++||++
T Consensus       207 ~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  246 (307)
T d1a06a_         207 PPFYD-ENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH  246 (307)
T ss_dssp             CSCCC-SSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHH
Confidence            99998 456666667766543221 1 34689999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=205.20  Aligned_cols=167  Identities=14%  Similarity=0.172  Sum_probs=120.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH-------------------HHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL-------------------ETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------------------~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++. +.+... +...++++|||+.+++|.+.+                   .++  .|||+.+++   ||
T Consensus        55 ~~l~~l~HpnIv~-~~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al--~ylH~~~Ii---Hr  127 (271)
T d1nvra_          55 CINKMLNHENVVK-FYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV--VYLHGIGIT---HR  127 (271)
T ss_dssp             HHHHTCCCTTBCC-EEEEEE-ETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHH--HHHHHTTEE---CS
T ss_pred             HHHHhCCCCCEee-Eeeeec-cCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHH--HHHHHcCCc---cC
Confidence            3678889988764 445544 456789999999988887632                   333  477777654   55


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHhC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELATG  141 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~g  141 (182)
                      |+||+||+++.++.+||+|||+|+....... ...+..+||+. |+|||++.+    ..+ +.++||||+||++|+|++|
T Consensus       128 DiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~-Y~APE~~~~----~~~~~~~~DiwSlGvilyeml~G  202 (271)
T d1nvra_         128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP-YVAPELLKR----REFHAEPVDVWSCGIVLTAMLAG  202 (271)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGG-GSCTHHHHC----SSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             cccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcC-ccCHhHhcC----CCCCCCceeeeHhHHHHHHHHhC
Confidence            5669999999999999999999987644322 11233689999 999999987    565 5789999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ++||.+..........+........++..+|+++++++++
T Consensus       203 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  242 (271)
T d1nvra_         203 ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  242 (271)
T ss_dssp             SCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHH
Confidence            9999873333233333333333333345789999998863

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=205.62  Aligned_cols=133  Identities=20%  Similarity=0.337  Sum_probs=103.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.+... +...++++|||+.++++.+.+..                 .+..|||+.  .++.|||+
T Consensus        56 ~il~~l~HpnIv-~l~~~~~-~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDi  131 (322)
T d1s9ja_          56 QVLHECNSPYIV-GFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDV  131 (322)
T ss_dssp             GGGGGCCCTTBC-CEEEEEE-CSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCC
T ss_pred             HHHHhCCCCCCC-cEEEEEE-ECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcccc
Confidence            377888888876 4455555 45678999999999998875421                 123477753  23556667


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+|||++.++.+||+|||+|.......   ....+||+. |+|||++.+    ..|+.++||||+||++|+|++|+.||
T Consensus       132 KP~NILl~~~~~vkl~DFGla~~~~~~~---~~~~~GT~~-Y~APEvl~~----~~y~~~~DiWSlGvil~ell~G~~Pf  203 (322)
T d1s9ja_         132 KPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRS-YMSPERLQG----THYSVQSDIWSMGLSLVEMAVGRYPI  203 (322)
T ss_dssp             SGGGEEECTTCCEEECCCCCCHHHHHHT---C---CCSSC-CCCHHHHHC----SCCCTTHHHHHHHHHHHHHHHSSCCS
T ss_pred             CHHHeeECCCCCEEEeeCCCccccCCCc---cccccCCcc-ccCchHHcC----CCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999997654332   233789999 999999998    78999999999999999999999999


Q ss_pred             CC
Q psy17162        146 DT  147 (182)
Q Consensus       146 ~~  147 (182)
                      .+
T Consensus       204 ~~  205 (322)
T d1s9ja_         204 PP  205 (322)
T ss_dssp             SC
T ss_pred             CC
Confidence            76

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=3.1e-32  Score=205.06  Aligned_cols=162  Identities=20%  Similarity=0.296  Sum_probs=125.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .|++.++|+|++. +.+... +...+++++++..++++.+.+..                 .++.|||+.+++   ||||
T Consensus        93 ~il~~l~hpnIv~-~~~~~~-~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~ii---HRDI  167 (350)
T d1rdqe_          93 RILQAVNFPFLVK-LEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI---YRDL  167 (350)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHHcCCCcEee-cccccc-cccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEe---cCcC
Confidence            3678888888764 444444 56678899999999888775421                 123477766654   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+|||++.++.+||+|||+|+......    ...+|++. |+|||++.+    ..++.++||||+||++|+|++|.+||
T Consensus       168 KP~NILl~~~g~ikL~DFG~a~~~~~~~----~~~~Gt~~-Y~APE~~~~----~~~~~~~DiwSlGvilyemltG~~Pf  238 (350)
T d1rdqe_         168 KPENLLIDQQGYIQVTDFGFAKRVKGRT----WTLCGTPE-ALAPEIILS----KGYNKAVDWWALGVLIYEMAAGYPPF  238 (350)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEECSSCB----CCCEECGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CHHHcccCCCCCEEeeeceeeeeccccc----ccccCccc-cCCHHHHcC----CCCCccccccchhHHHHHHHhCCCCC
Confidence            6999999999999999999997765432    23678888 999999998    78899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+ ........++..+. +.+ |..+|++++++|+.
T Consensus       239 ~~-~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li~~  271 (350)
T d1rdqe_         239 FA-DQPIQIYEKIVSGK-VRF-PSHFSSDLKDLLRN  271 (350)
T ss_dssp             CC-SSHHHHHHHHHHCC-CCC-CTTCCHHHHHHHHH
T ss_pred             CC-cCHHHHHHHHhcCC-CCC-CccCCHHHHHHHHH
Confidence            98 56667677777665 445 46799999999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=8.4e-32  Score=200.50  Aligned_cols=162  Identities=14%  Similarity=0.203  Sum_probs=124.4

Q ss_pred             HHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCCCC
Q psy17162          6 AVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFSVD   68 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk~~   68 (182)
                      +.++|+|++ .+.+... +...++++|||+.++++.+.+..                 .+..|||+.+++   |||+||+
T Consensus        58 ~~~~hp~Iv-~~~~~~~-~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~ii---HrDikp~  132 (320)
T d1xjda_          58 LAWEHPFLT-HMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIV---YRDLKLD  132 (320)
T ss_dssp             HHTTCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCB---CCCCCGG
T ss_pred             HhCCCCcEE-EEEEEEc-cCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCee---eccCccc
Confidence            357777776 4445544 56779999999999999886421                 123477776554   5556699


Q ss_pred             cEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q psy17162         69 TFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYDTW  148 (182)
Q Consensus        69 nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~~~  148 (182)
                      |||++.++.+||+|||.++........ .+..+|++. |+|||++.+    ..++.++||||+||++|+|++|+.||.+ 
T Consensus       133 NiL~~~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvilyemltG~~PF~~-  205 (320)
T d1xjda_         133 NILLDKDGHIKIADFGMCKENMLGDAK-TNTFCGTPD-YIAPEILLG----QKYNHSVDWWSFGVLLYEMLIGQSPFHG-  205 (320)
T ss_dssp             GEEECTTSCEEECCCTTCBCCCCTTCC-BCCCCSCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHSSCSSCC-
T ss_pred             ceeecCCCceeccccchhhhccccccc-ccccCCCCC-cCCHHHHcC----CCCCchhhhhhhhHHHHHHHhCCCCCCC-
Confidence            999999999999999999765543321 233678888 999999998    7899999999999999999999999998 


Q ss_pred             CCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        149 GSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       149 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .++.+...++..+. +.+ |..+|+++++||++
T Consensus       206 ~~~~~~~~~i~~~~-~~~-p~~~s~~~~dli~~  236 (320)
T d1xjda_         206 QDEEELFHSIRMDN-PFY-PRWLEKEAKDLLVK  236 (320)
T ss_dssp             SSHHHHHHHHHHCC-CCC-CTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCC-CCC-CccCCHHHHHHHHH
Confidence            46666666666654 556 56789999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5.5e-32  Score=197.72  Aligned_cols=169  Identities=17%  Similarity=0.205  Sum_probs=117.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +..+.  ++..+++++||+.+++|.+.+..                  .+..|||+.++   .|||
T Consensus        56 ~~l~~l~HpnIv~-~~~~~--~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i---vHrD  129 (276)
T d1uwha_          56 GVLRKTRHVNILL-FMGYS--TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD  129 (276)
T ss_dssp             HHHTTCCCTTBCC-EEEEE--CSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             HHHHhCCCCCEee-eeEEE--eccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCE---eccc
Confidence            4677888988874 44443  34568999999999999886411                  12347777654   5555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |||+|||++.++.+||+|||+|+....... .......|++. |+|||++..... ..++.++|||||||++|||+||+.
T Consensus       130 lKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~-y~APE~l~~~~~-~~~~~~sDiwS~Gv~l~el~tg~~  207 (276)
T d1uwha_         130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDK-NPYSFQSDVYAFGIVLYELMTGQL  207 (276)
T ss_dssp             CCGGGEEEETTSSEEECCCCCSCC------------CCCCGG-GCCHHHHTTCSS-CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcc-cCCHHHHhcccC-CCCCchhhhhhhHHHHHHHHHCCC
Confidence            669999999999999999999977543322 11233678888 999999875221 467899999999999999999999


Q ss_pred             CCCCCCCcHHHHHH-HhhCCCCC-CC--CCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQ-VVQDDPPR-LP--PGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~-i~~~~~~~-~~--~~~~s~~~~~~i~  180 (182)
                      ||.+. .....+.. +..+..++ ++  +..+|+++++++.
T Consensus       208 Pf~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~  247 (276)
T d1uwha_         208 PYSNI-NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA  247 (276)
T ss_dssp             TTTTC-CCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHH
T ss_pred             CCCCC-ChHHHHHHHHhcCCCCCcchhccccchHHHHHHHH
Confidence            99984 44444444 44443322 11  4468899999764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.98  E-value=3.9e-32  Score=204.65  Aligned_cols=163  Identities=17%  Similarity=0.213  Sum_probs=125.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHH--------------------HHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKEL--------------------ETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------------------~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++ .+.++.. +...++++||++.+++|.+.+                    .+  +.|||+.+++   |
T Consensus        78 ~il~~l~HpnIv-~~~~~~~-~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~a--L~ylH~~~ii---H  150 (352)
T d1koba_          78 SIMNQLHHPKLI-NLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG--LKHMHEHSIV---H  150 (352)
T ss_dssp             HHHTTCCSTTBC-CEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHH--HHHHHHTTEE---C
T ss_pred             HHHHhCCCCCCC-cEEEEEE-ECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHH--HHHHHHCCee---e
Confidence            367788888776 5555555 567889999999999987742                    22  3477776655   5


Q ss_pred             cCCCCCcEEEc--CCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         63 RYFSVDTFHQR--LQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        63 ~~lk~~nil~~--~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |||||+|||++  .++.+||+|||+|........  .....+++. |+|||++.+    ..++.++||||+||++|+|++
T Consensus       151 RDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlGvilyellt  223 (352)
T d1koba_         151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAE-FAAPEIVDR----EPVGFYTDMWAIGVLGYVLLS  223 (352)
T ss_dssp             CCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--EEEECSSGG-GCCHHHHTT----CCBCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCeEEEeecccceecCCCCc--eeeccCccc-ccCHHHHcC----CCCCCccchHHHHHHHHHHHh
Confidence            55569999998  568999999999987654432  233678888 999999988    789999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      |.+||.+ ....+.+..+..+... ++   +..+|+++++||++
T Consensus       224 G~~Pf~~-~~~~~~~~~i~~~~~~-~~~~~~~~~s~~~~~li~~  265 (352)
T d1koba_         224 GLSPFAG-EDDLETLQNVKRCDWE-FDEDAFSSVSPEAKDFIKN  265 (352)
T ss_dssp             SCCSSCC-SSHHHHHHHHHHCCCC-CCSSTTTTSCHHHHHHHHT
T ss_pred             CCCCCCC-CCHHHHHHHHHhCCCC-CCcccccCCCHHHHHHHHH
Confidence            9999998 5666777777766432 22   34689999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=7.2e-32  Score=204.06  Aligned_cols=165  Identities=14%  Similarity=0.171  Sum_probs=118.6

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYFS   66 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~lk   66 (182)
                      +++.++|+|++ .+.+... +...++++||++.+++|.+.+..                 .+..|||+.++   .|||||
T Consensus        60 ~l~~~~hpnIv-~l~~~~~-~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~i---iHrDlK  134 (364)
T d1omwa3          60 LVSTGDCPFIV-CMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV---VYRDLK  134 (364)
T ss_dssp             HHSSSCCTTBC-CEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCCCS
T ss_pred             HHhcCCCCcEE-EEEEEEE-ECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCc---cceeec
Confidence            34445576665 4555555 45678999999999998875421                 12346776655   455566


Q ss_pred             CCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCCC
Q psy17162         67 VDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPYD  146 (182)
Q Consensus        67 ~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf~  146 (182)
                      |+|||++.++.+||+|||+|+.......   ...+||+. |+|||++..   ...++.++||||+||++|+|++|+.||.
T Consensus       135 P~NILl~~~g~iKl~DFGla~~~~~~~~---~~~~GT~~-y~APE~~~~---~~~~~~~~DiwSlGvilyemltG~~Pf~  207 (364)
T d1omwa3         135 PANILLDEHGHVRISDLGLACDFSKKKP---HASVGTHG-YMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFR  207 (364)
T ss_dssp             GGGEEECSSSCEEECCCTTCEECSSSCC---CSCCSCGG-GCCHHHHST---TCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cceeEEcCCCcEEEeeeceeeecCCCcc---cccccccc-cchhHHhhc---CCCCCcccchhHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999987655432   33689999 999999874   1468899999999999999999999998


Q ss_pred             CCCC-cHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        147 TWGS-PFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       147 ~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +... ....+.......++.+ |..+|+++++||++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~li~~  242 (364)
T d1omwa3         208 QHKTKDKHEIDRMTLTMAVEL-PDSFSPELRSLLEG  242 (364)
T ss_dssp             SSCSSCHHHHHHHSSSCCCCC-CSSSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhcccCCCCC-CCCCCHHHHHHHHH
Confidence            7322 2222333333344445 56799999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=7.5e-32  Score=202.92  Aligned_cols=166  Identities=17%  Similarity=0.168  Sum_probs=124.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.++|+|++.. .++.. +...++++||++.+++|.+.+.                  ..++.|||+.+++   |||
T Consensus        75 ~il~~l~HpnIv~~-~~~~~-~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~ii---HrD  149 (350)
T d1koaa2          75 QTMSVLRHPTLVNL-HDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---HLD  149 (350)
T ss_dssp             HHHHHTCCTTBCCE-EEEEE-ETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEE---CCC
T ss_pred             HHHHhCCCCCCCcE-EEEEE-ECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCe---eee
Confidence            47888998887644 44444 4677899999999999877541                  0123477776654   555


Q ss_pred             CCCCcEEEcC--CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRL--QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~--~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |||+||+++.  ++.+||+|||+|+.......  .....||+. |+|||++.+    ..++.++||||+||++|+|++|+
T Consensus       150 iKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gT~~-Y~aPEv~~~----~~~~~~~DiwSlGvilyell~G~  222 (350)
T d1koaa2         150 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAE-FAAPEVAEG----KPVGYYTDMWSVGVLSYILLSGL  222 (350)
T ss_dssp             CCGGGEEESSTTSCCEEECCCTTCEECCTTSC--EEEECSCTT-TCCHHHHHT----CCBCHHHHHHHHHHHHHHHHHSS
T ss_pred             echhHeeeccCCCCeEEEeecchheecccccc--cceecCccc-ccCHHHHcC----CCCChhHhhhhhhHHHHHHHhCC
Confidence            6699999964  57899999999977654332  233678888 999999988    78899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCC--CCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLP--PGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~~i~~  181 (182)
                      .||.+ .+..+.+..+..+.....+  ...+|+++++||++
T Consensus       223 ~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  262 (350)
T d1koaa2         223 SPFGG-ENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK  262 (350)
T ss_dssp             CSSCC-SSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHH
Confidence            99998 5666777777665432111  23689999999864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6e-32  Score=201.83  Aligned_cols=166  Identities=14%  Similarity=0.113  Sum_probs=120.9

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------------
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------------   46 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------------   46 (182)
                      ++..+ +|+|++ .+.+... +...++++||++.++++.+.+..                                    
T Consensus        93 ~l~~l~~HpnIv-~l~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  170 (325)
T d1rjba_          93 MMTQLGSHENIV-NLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFA  170 (325)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHH
T ss_pred             HHHHhcCCCcEe-EEEEEEe-eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHH
Confidence            55566 566665 5555555 55678999999999888775421                                    


Q ss_pred             ----HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCC
Q psy17162         47 ----LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSN  121 (182)
Q Consensus        47 ----~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~  121 (182)
                          .+..|||+.++   .||||||+||+++.++.+||+|||+|+........ ......|++. |+|||++..    ..
T Consensus       171 ~qi~~gl~yLH~~~I---iHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~-y~aPE~l~~----~~  242 (325)
T d1rjba_         171 YQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-WMAPESLFE----GI  242 (325)
T ss_dssp             HHHHHHHHHHHHTTE---EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGG-GCCHHHHHH----CC
T ss_pred             HHHHHHHHHHHhCCe---eeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCc-cCChHHHcC----CC
Confidence                12347777654   55566699999999999999999999775443221 1222456777 999999987    78


Q ss_pred             CCccchHHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHh-hCCCCCCCCCCCCHHHHHHhhh
Q psy17162        122 YDIRSDVWSLGISLIELAT-GRFPYDTWGSPFEQLKQVV-QDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       122 ~~~~~Diwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ++.++||||+||++|||+| |.+||.+.... +.+..++ .+..++. |..+|++++++|++
T Consensus       243 ~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-~~~~~~~~~~~~~~~-p~~~~~~l~~li~~  302 (325)
T d1rjba_         243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-ANFYKLIQNGFKMDQ-PFYATEEIYIIMQS  302 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCcceeccchhHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCCCCCC-CCcCCHHHHHHHHH
Confidence            9999999999999999998 89999984444 4445544 4454555 56789999998853

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-31  Score=194.25  Aligned_cols=166  Identities=17%  Similarity=0.191  Sum_probs=115.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.++|+|++ .+.++.. +...+++++|+...+++.+.+..                  .+..|+|+.++   .|||
T Consensus        52 ~~l~~l~HpnIv-~~~g~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~i---iHrD  126 (263)
T d1sm2a_          52 EVMMKLSHPKLV-QLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV---IHRD  126 (263)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC---CCTT
T ss_pred             HHHHhcCCCCcc-cccceec-cCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccce---eecc
Confidence            467888888876 4444444 45668899999999998885411                  12347776654   5556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||+++..............|+.. |+|||++..    ..++.++||||+||++|||+| |.+
T Consensus       127 lKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~-y~aPE~l~~----~~~~~k~DVwS~Gvil~el~t~~~~  201 (263)
T d1sm2a_         127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK-WASPEVFSF----SRYSSKSDVWSFGVLMWEVFSEGKI  201 (263)
T ss_dssp             CSGGGEEECGGGCEEECSCC------------------CTT-SCCHHHHTT----CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cchhheeecCCCCeEecccchheeccCCCceeecceecCcc-cCChHHhcC----CCCCchhhhcchHHHHHHHHHCCCC
Confidence            66999999999999999999997765443322223567777 999999988    789999999999999999999 567


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+ ....+.+..+..+..+.. |..+|++++++++
T Consensus       202 ~~~~-~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~  236 (263)
T d1sm2a_         202 PYEN-RSNSEVVEDISTGFRLYK-PRLASTHVYQIMN  236 (263)
T ss_dssp             TTCS-CCHHHHHHHHHHTCCCCC-CTTSCHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHhcCCCCC-ccccCHHHHHHHH
Confidence            7766 566566777777766655 5678999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=7e-32  Score=198.21  Aligned_cols=167  Identities=14%  Similarity=0.107  Sum_probs=120.4

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.++|+|++.. .+... +...++++||++.++++.+.+..                   .+..|||+.+   +.||
T Consensus        65 ~il~~l~HpnIv~~-~~~~~-~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHr  139 (287)
T d1opja_          65 AVMKEIKHPNLVQL-LGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR  139 (287)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             HHHHhCCCCCEecC-CccEe-eCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC---cccC
Confidence            47888999888744 44443 45678899999999888775311                   1234777665   5555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+|||++.++.+||+|||+|+..............++.. |+|||++..    ..++.++||||+||++|+|++|..
T Consensus       140 DlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~-y~aPE~~~~----~~~~~k~DiwS~Gv~l~ell~~~~  214 (287)
T d1opja_         140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTAPESLAY----NKFSIKSDVWAFGVLLWEIATYGM  214 (287)
T ss_dssp             CCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGG-GCCHHHHHH----CCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccccCeEEECCCCcEEEccccceeecCCCCceeecccccccc-ccChHHHcC----CCCCchhhhhhHHHHHHHHHhCCC
Confidence            666999999999999999999998765443221222346677 999999988    789999999999999999999665


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.......+....+..+..+++ |..+|++++++++
T Consensus       215 p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  250 (287)
T d1opja_         215 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMR  250 (287)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHhcCCCCCC-CccchHHHHHHHH
Confidence            55442344344444445655666 5678999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.9e-32  Score=197.98  Aligned_cols=166  Identities=19%  Similarity=0.212  Sum_probs=125.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .++..  ...++++|||+.+++|.+.+.                  +.+..|||+.++   .|||
T Consensus        61 ~il~~l~HpnIv~l-~g~~~--~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~i---iHrD  134 (285)
T d1u59a_          61 QIMHQLDNPYIVRL-IGVCQ--AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---VHRD  134 (285)
T ss_dssp             HHHHHCCCTTBCCE-EEEEE--SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHHhCCCCCEeeE-eeeec--cCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCc
Confidence            47788998888654 44444  345889999999999887531                  112347777655   5555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      +||+||+++.++.+||+|||+|+.......  .......+++. |+|||++..    ..++.++||||+||++|||+| |
T Consensus       135 lKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~ksDVwS~Gv~l~E~lt~G  209 (285)
T d1u59a_         135 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-WYAPECINF----RKFSSRSDVWSYGVTMWEALSYG  209 (285)
T ss_dssp             CSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGG-GCCHHHHHH----CEECHHHHHHHHHHHHHHHHTTS
T ss_pred             CchhheeeccCCceeeccchhhhcccccccccccccccccCcc-ccChHHHhC----CCCCccchhhcchHHHHHHHhCC
Confidence            669999999999999999999976543321  11222456777 999999987    788999999999999999998 9


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ..||.+. ...+....+..+.++++ |..+|++++++++.
T Consensus       210 ~~Pf~~~-~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~~  247 (285)
T d1u59a_         210 QKPYKKM-KGPEVMAFIEQGKRMEC-PPECPPELYALMSD  247 (285)
T ss_dssp             CCTTTTC-CTHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCCCC-CHHHHHHHHHcCCCCCC-CCcCCHHHHHHHHH
Confidence            9999984 55677777778877777 56689999998753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.6e-32  Score=197.44  Aligned_cols=165  Identities=18%  Similarity=0.210  Sum_probs=123.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++.. .++..  ...++++||++.+++|.+.+..                 .+..|||+.++   .|||+
T Consensus        60 ~il~~l~HpnIv~~-~g~~~--~~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i---iHrDl  133 (277)
T d1xbba_          60 NVMQQLDNPYIVRM-IGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF---VHRDL  133 (277)
T ss_dssp             HHHHTCCCTTBCCE-EEEEE--SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTE---ECSCC
T ss_pred             HHHHhCCCCCCceE-EEEec--cCCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCc---ccCCC
Confidence            46788999888754 44544  3457899999999999875421                 12347777664   55566


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      ||+||+++.++.+||+|||+++........  ......|++. |+|||++..    ..++.++|||||||++|||++ |+
T Consensus       134 Kp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~-y~APE~l~~----~~~~~~sDiwS~Gv~l~ellt~g~  208 (277)
T d1xbba_         134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK-WYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQ  208 (277)
T ss_dssp             SGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             cchhhcccccCcccccchhhhhhccccccccccccccCCCce-ecCchhhcC----CCCCchhhhccchhhhhHHhhCCC
Confidence            699999999999999999999765432211  1122457777 999999987    788999999999999999998 89


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||.+ ....+....+..+.++++ |..+|++++++++
T Consensus       209 ~Pf~~-~~~~~~~~~i~~~~~~~~-p~~~~~~~~~li~  244 (277)
T d1xbba_         209 KPYRG-MKGSEVTAMLEKGERMGC-PAGCPREMYDLMN  244 (277)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CcccCHHHHHHHH
Confidence            99998 456566666777777777 5678999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=196.91  Aligned_cols=168  Identities=15%  Similarity=0.136  Sum_probs=119.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------------LRCI   50 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------------~~~~   50 (182)
                      ++..+.++++++.+......+...++++||++.++++.+++..                                 .+..
T Consensus        69 ~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~  148 (299)
T d1ywna1          69 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME  148 (299)
T ss_dssp             HHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHH
Confidence            4555666666666666666677788999999999888776521                                 1234


Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      |||+.++   .||||||+||+++.++.+||+|||+|+....... .......|++. |+|||++.+    ..++.++|||
T Consensus       149 ylH~~~i---vHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~-y~APE~l~~----~~~~~~sDiw  220 (299)
T d1ywna1         149 FLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WMAPETIFD----RVYTIQSDVW  220 (299)
T ss_dssp             HHHHTTC---CCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGG-GCCHHHHHH----CCCCHHHHHH
T ss_pred             HHHhCCC---cCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCcc-ccchhHhhc----CCCCccccee
Confidence            7776654   5556669999999999999999999976543322 11233567888 999999988    7889999999


Q ss_pred             HHHHHHHHHHhC-CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        130 SLGISLIELATG-RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       130 slg~~l~~l~~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      |+||++|||++| .+||.+..........+..+..++. |..+|+++++++.
T Consensus       221 S~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~  271 (299)
T d1ywna1         221 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTML  271 (299)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCC-CTTCCHHHHHHHH
T ss_pred             ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC-CccCCHHHHHHHH
Confidence            999999999986 6789875445444455566766666 5668999999875

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.3e-31  Score=196.51  Aligned_cols=166  Identities=22%  Similarity=0.266  Sum_probs=116.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +.++.. +...++++|||+.++++.+.+.                  +.+..|||+.++   .|||
T Consensus        79 ~~l~~l~HpnIv~-l~g~~~-~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i---iHrD  153 (299)
T d1jpaa_          79 SIMGQFDHPNVIH-LEGVVT-KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY---VHRD  153 (299)
T ss_dssp             HHHTTCCCTTBCC-EEEEEC-SSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             HHHHhCCCCCCcc-EEEEEe-eCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCC---ccCc
Confidence            3677888888874 455554 5567899999999999877431                  112347777665   5556


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh----hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII----RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~----~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |||+|||++.++.+||+|||+|+........    ......+++. |+|||.+..    ..++.++|||||||++|||+|
T Consensus       154 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~~sDvwS~Gvvl~el~t  228 (299)
T d1jpaa_         154 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQY----RKFTSASDVWSYGIVMWEVMS  228 (299)
T ss_dssp             CCGGGEEECTTCCEEECCC-----------------------CGG-GSCHHHHHS----CCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCcc-ccCHHHHhc----CCCCcccccccchHHHHHHHh
Confidence            6699999999999999999999875443221    0111345666 999999988    789999999999999999998


Q ss_pred             -CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        141 -GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       141 -g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                       |.+||.+ ....+.+..+..+..++. |..+|++++++++
T Consensus       229 ~g~~Pf~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  267 (299)
T d1jpaa_         229 YGERPYWD-MTNQDVINAIEQDYRLPP-PMDCPSALHQLML  267 (299)
T ss_dssp             TSCCTTTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCCCCC-CCHHHHHHHHHcCCCCCC-CccchHHHHHHHH
Confidence             8999988 466677777777766665 5568999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=195.56  Aligned_cols=165  Identities=18%  Similarity=0.183  Sum_probs=125.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|++ .+.++.. +...++++||++.++++.+.+..                 .+..|||+.+++   |||+
T Consensus        65 ~il~~l~HpnIv-~~~~~~~-~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~iv---HrDi  139 (293)
T d1jksa_          65 SILKEIQHPNVI-TLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA---HFDL  139 (293)
T ss_dssp             HHHHHCCCTTBC-CEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE---CCCC
T ss_pred             HHHHhCCCCCCC-cEEEEEE-ECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhccee---eccc
Confidence            367889998876 5555555 56778999999999999875421                 123477776655   5555


Q ss_pred             CCCcEEEcCCC----eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         66 SVDTFHQRLQF----LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        66 k~~nil~~~~~----~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      ||+||+++.++    .+|++|||+|........  .....+++. |+|||++.+    ..++.++||||+||++|+|++|
T Consensus       140 Kp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~--~~~~~~t~~-y~APE~~~~----~~~~~~~DiwSlGvilyell~g  212 (293)
T d1jksa_         140 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPE-FVAPEIVNY----EPLGLEADMWSIGVITYILLSG  212 (293)
T ss_dssp             SGGGEEESCSSSSSCCEEECCCTTCEECTTSCB--CSCCCCCGG-GCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccceEEEecCCCcccceEecchhhhhhcCCCcc--ccccCCCCc-ccCHHHHcC----CCCCCcccchhhhHHHHHHHcC
Confidence            59999998776    499999999977654332  233678888 999999988    7889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCC---CCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLP---PGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~~i~~  181 (182)
                      +.||.+ ....+.+..+..+.. .++   +..+|+++++||++
T Consensus       213 ~~Pf~~-~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~  253 (293)
T d1jksa_         213 ASPFLG-DTKQETLANVSAVNY-EFEDEYFSNTSALAKDFIRR  253 (293)
T ss_dssp             SCSSCC-SSHHHHHHHHHTTCC-CCCHHHHTTSCHHHHHHHHT
T ss_pred             CCCCCC-CCHHHHHHHHHhcCC-CCCchhcCCCCHHHHHHHHH
Confidence            999998 466666777666543 232   24689999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=195.69  Aligned_cols=166  Identities=16%  Similarity=0.224  Sum_probs=115.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .+...  +..++++||++.++++.+.+..                  .+..|+|+.+++   |||
T Consensus        60 ~~l~~l~HpnIv~l-~~~~~--~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ii---HrD  133 (273)
T d1mp8a_          60 LTMRQFDHPHIVKL-IGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV---HRD  133 (273)
T ss_dssp             HHHHTCCCTTBCCE-EEEEC--SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC---CSC
T ss_pred             HHHHhCCCCCEeeE-EEEEe--cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCee---ccc
Confidence            36778888887644 44443  4568999999999988774311                  123477776655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||+|+..........+...+++. |+|||++..    ..++.++||||+||++|||++ |.+
T Consensus       134 lKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~-y~apE~l~~----~~~~~~~DiwSlGvil~e~lt~g~~  208 (273)
T d1mp8a_         134 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF----RRFTSASDVWMFGVCMWEILMHGVK  208 (273)
T ss_dssp             CSGGGEEEEETTEEEECC-------------------CCGG-GCCHHHHHH----CCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cchhheeecCCCcEEEccchhheeccCCcceeccceecCcc-cchhhHhcc----CCCCCccccccchHHHHHHHhcCCC
Confidence            56999999999999999999998765443322333556777 999999987    789999999999999999998 899


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||.+ ....+....+..+..+++ |..+|++++++|++
T Consensus       209 P~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~  244 (273)
T d1mp8a_         209 PFQG-VKNNDVIGRIENGERLPM-PPNCPPTLYSLMTK  244 (273)
T ss_dssp             TTTT-CCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHH
Confidence            9988 466677777778877777 55689999998864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=195.19  Aligned_cols=166  Identities=18%  Similarity=0.224  Sum_probs=123.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-----------------H--HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-----------------T--LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----------------~--~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.++|+|++..+ ++..  +..++++|||+..+++.+.+.                 .  .+..|||+.+   +.||
T Consensus        60 ~~l~~l~HpnIv~~~-g~~~--~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHr  133 (272)
T d1qpca_          60 NLMKQLQHQRLVRLY-AVVT--QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR  133 (272)
T ss_dssp             HHHHHCCCTTBCCEE-EEEC--SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECS
T ss_pred             HHHHhCCCCCEeEEE-eeec--cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccC
Confidence            467888898887544 4443  456789999999999877320                 0  1134676655   5566


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC-C
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG-R  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g-~  142 (182)
                      ||||+||+++.++.+||+|||+|+..............++.. |+|||++..    ..++.++||||+||++|||+|| .
T Consensus       134 DiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~-y~APE~~~~----~~~~~~sDvwS~Gvvl~ellt~~~  208 (272)
T d1qpca_         134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGR  208 (272)
T ss_dssp             CCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTT-TSCHHHHHH----CEECHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccchhheeeecccceeeccccceEEccCCccccccccCCccc-ccChHHHhC----CCCCchhhhhhhHHHHHHHHhCCC
Confidence            666999999999999999999998765543322333567777 999999987    7889999999999999999995 5


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      +|+.. ....+....+..+..+.. |..+|+++++++++
T Consensus       209 ~~~~~-~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~~  245 (272)
T d1qpca_         209 IPYPG-MTNPEVIQNLERGYRMVR-PDNCPEELYQLMRL  245 (272)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhcCCCCC-cccChHHHHHHHHH
Confidence            55655 566666777777776666 56789999998853

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-30  Score=188.87  Aligned_cols=166  Identities=16%  Similarity=0.189  Sum_probs=125.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.++|+|++.. ..+.. +...+++++||...+++.+.+.                  +.+..|||+.+++|   +|
T Consensus        51 ~~~~~l~HpnIv~~-~g~~~-~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH---~d  125 (258)
T d1k2pa_          51 KVMMNLSHEKLVQL-YGVCT-KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH---RD  125 (258)
T ss_dssp             HHHHTCCCTTBCCE-EEEEC-CSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCC---SC
T ss_pred             HHHHhcCCCceeeE-EEEEe-eCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccc---cc
Confidence            36778888887644 44444 4567999999999888777420                  11234888776555   55


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GRF  143 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~~  143 (182)
                      +||+||+++.++.+||+|||+++..............++.. |+|||.+..    ..++.++||||+||++|||+| |+.
T Consensus       126 lk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~-y~aPE~~~~----~~~~~ksDiwS~G~~l~el~t~g~~  200 (258)
T d1k2pa_         126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY----SKFSSKSDIWAFGVLMWEIYSLGKM  200 (258)
T ss_dssp             CSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGG-GCCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCC-cCCcHHhcC----CCCCcceeecccchhhHhHHhcCCC
Confidence            66999999999999999999997655443322233556777 999999987    788999999999999999998 899


Q ss_pred             CCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||.+. ...+...++..+..++. |..+|++++++++
T Consensus       201 Pf~~~-~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~  235 (258)
T d1k2pa_         201 PYERF-TNSETAEHIAQGLRLYR-PHLASEKVYTIMY  235 (258)
T ss_dssp             TTTTS-CHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCC-CHHHHHHHHHhCCCCCC-cccccHHHHHHHH
Confidence            99984 56677777777766555 6778999999875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=2.8e-30  Score=188.69  Aligned_cols=169  Identities=17%  Similarity=0.180  Sum_probs=123.6

Q ss_pred             HHHHhC-CCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          4 IRAVFN-QDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+. |+|++ .+.++.. +...++++||++.+++|.+.+...                 +..|||+.+   +.|+|+
T Consensus        62 ~l~~l~~hpnIv-~~~~~~~-~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDl  136 (277)
T d1phka_          62 ILRKVSGHPNII-QLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDL  136 (277)
T ss_dssp             HHHHHTTCTTBC-CEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred             HHHHhcCCCCeE-EEEeecc-cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC---Cccccc
Confidence            566676 55554 5566665 677899999999999998865211                 124666665   455556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCC--CCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSG--NPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      ||+||+++.++.+||+|||++........  .+...|+.. |+|||.+.+..  ....++.++||||+||++|+|++|+.
T Consensus       137 kp~Nill~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~  213 (277)
T d1phka_         137 KPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPS-YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP  213 (277)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCTTCC--BCCCCSCGG-GCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccceEEEcCCCCeEEccchheeEccCCCc--eeeeeccCC-CCCHHHhhccccccCCCCCchheEcccchhhhhhccCCC
Confidence            69999999999999999999987655433  334678888 99999986311  11456789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHhhCCCC-CCC-CCCCCHHHHHHhhh
Q psy17162        144 PYDTWGSPFEQLKQVVQDDPP-RLP-PGEFSSDFKDFITL  181 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~~~~~~-~~~-~~~~s~~~~~~i~~  181 (182)
                      ||.+ ..+.+...++..+... +.+ ...+|+++++++++
T Consensus       214 Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  252 (277)
T d1phka_         214 PFWH-RKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR  252 (277)
T ss_dssp             SSCC-SSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHH
Confidence            9998 5666667777766422 221 23789999999863

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.3e-30  Score=188.33  Aligned_cols=167  Identities=20%  Similarity=0.168  Sum_probs=114.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.++|+|++ .+.++.. +...+++++|++..+.+.+.+.                .  ....|||+.++   .|||
T Consensus        61 ~il~~l~H~nIv-~~~g~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i---iHrD  135 (283)
T d1mqba_          61 GIMGQFSHHNII-RLEGVIS-KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY---VHRD  135 (283)
T ss_dssp             HHHHTCCCTTBC-CEEEEEC-SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             HHHHhcCCCCEe-eeeEEEe-cCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc---ccCc
Confidence            467888888776 4445544 4567889999988887766421                1  12347777655   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |||+|||++.++.+||+|||+|+........  ......|+.. |+|||++..    ..++.++|||||||++|||++|.
T Consensus       136 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~-Y~APE~l~~----~~~~~~sDI~S~Gvil~el~t~~  210 (283)
T d1mqba_         136 LAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-WTAPEAISY----RKFTSASDVWSFGIVMWEVMTYG  210 (283)
T ss_dssp             CCGGGEEECTTCCEEECCCCC-----------------CCCGG-GSCHHHHHS----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCcc-ccCHHHHcc----CCCCCcccccccHHHHHHHHhCC
Confidence            6699999999999999999999875443221  1122456777 999999988    78999999999999999999965


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .|+.......+....+..+..++. |..+|++++++++
T Consensus       211 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  247 (283)
T d1mqba_         211 ERPYWELSNHEVMKAINDGFRLPT-PMDCPSAIYQLMM  247 (283)
T ss_dssp             CCTTTTCCHHHHHHHHHTTCCCCC-CTTCBHHHHHHHH
T ss_pred             CCccccCCHHHHHHHHhccCCCCC-chhhHHHHHHHHH
Confidence            444442456566666667766666 5568999998875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=4e-30  Score=187.95  Aligned_cols=169  Identities=18%  Similarity=0.200  Sum_probs=117.4

Q ss_pred             HHHHhCCCCcEEEEEEeeecCC--CceEEEeccCccchHHHHHHH-----------------HHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDD--KKVVLVTGKGEAEKVQKELET-----------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~-----------------~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.........+.  ..++++||++.++++.+.+..                 .+..|||+.++   .|||
T Consensus        60 ~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i---iHrD  136 (277)
T d1o6ya_          60 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI---IHRD  136 (277)
T ss_dssp             HHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---ECCC
T ss_pred             HHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCc---cCcc
Confidence            6777899888765544443322  357899999999998875311                 11246766654   5555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |||+||+++.++.++++|||.+........  ......+|++. |+|||++.+    ..++.++||||+||++|+|+||+
T Consensus       137 iKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~-Y~aPE~~~~----~~~~~~~DiwSlGvilyelltG~  211 (277)
T d1o6ya_         137 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ-YLSPEQARG----DSVDARSDVYSLGCVLYEVLTGE  211 (277)
T ss_dssp             CSGGGEEEETTSCEEECCCTTCEECC----------------T-TCCHHHHTT----CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccCcccccCccccceeehhhhhhhhccccccccccccccCccc-ccCHHHHcC----CCCCcceecccchHHHHHHHhCC
Confidence            669999999999999999998865433221  11233678888 999999988    78999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCC--CCCCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRL--PPGEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~~~~i~~  181 (182)
                      +||.+ ..+.+...++..+.+.+.  ....+|++++++|++
T Consensus       212 ~Pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~  251 (277)
T d1o6ya_         212 PPFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK  251 (277)
T ss_dssp             CSCCC-SSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHH
T ss_pred             CCCCC-cCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHH
Confidence            99998 566677767666543321  134789999998864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.5e-30  Score=189.11  Aligned_cols=144  Identities=17%  Similarity=0.132  Sum_probs=108.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhcccccC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      +++.++|+|++.. .++.. +...++++||++.++.+...                   +.++.  |||+.+++   |||
T Consensus        53 il~~l~hpnIv~~-~~~~~-~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~--~lH~~~ii---HrD  125 (299)
T d1ua2a_          53 LLQELSHPNIIGL-LDAFG-HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE--YLHQHWIL---HRD  125 (299)
T ss_dssp             HHHHCCCTTBCCE-EEEEC-CTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHH--HHHHTTCC---CCC
T ss_pred             HHHhCCCCCEeEE-Eeeec-cCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHH--Hhhcccee---ccc
Confidence            6788898887644 45554 45668999999887766542                   23333  77777655   555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+||+++.++.+||+|||.|+........ ....+|++. |+|||++..   ...++.++||||+||++|+|++|++|
T Consensus       126 iKp~NIli~~~~~~KL~DFG~a~~~~~~~~~-~~~~~gt~~-y~aPE~~~~---~~~~~~~~DiwSlGvil~el~~g~~p  200 (299)
T d1ua2a_         126 LKPNNLLLDENGVLKLADFGLAKSFGSPNRA-YTHQVVTRW-YRAPELLFG---ARMYGVGVDMWAVGCILAELLLRVPF  200 (299)
T ss_dssp             CCGGGEEECTTCCEEECCCGGGSTTTSCCCC-CCCSCCCCT-TCCHHHHTT---CSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCcceEEecCCCccccccCccccccCCCccc-ccceecChh-hccHHHHcc---CCCCChhhhhhhcchHHHHHHhCcCC
Confidence            5599999999999999999999776554332 223678888 999999875   14578999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHhh
Q psy17162        145 YDTWGSPFEQLKQVVQ  160 (182)
Q Consensus       145 f~~~~~~~~~~~~i~~  160 (182)
                      |.+ ....+++.++..
T Consensus       201 f~~-~~~~~~l~~i~~  215 (299)
T d1ua2a_         201 LPG-DSDLDQLTRIFE  215 (299)
T ss_dssp             SCC-SSHHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHHH
Confidence            998 566677766643

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-30  Score=188.61  Aligned_cols=165  Identities=20%  Similarity=0.228  Sum_probs=116.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------------------HHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------------------TLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------------------~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++..  +..++++|||+..+++...+.                   +.++.|||+.+   +.|+
T Consensus        64 ~~l~~l~h~nIv~~-~g~~~--~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~  137 (285)
T d1fmka3          64 QVMKKLRHEKLVQL-YAVVS--EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR  137 (285)
T ss_dssp             HHHHHCCCTTBCCE-EEEEC--SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             HHHHhcccCCEeEE-EEEEe--cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh---eecc
Confidence            36788999887644 44443  356789999999888765421                   01234777765   4555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC-C
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG-R  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g-~  142 (182)
                      |+||+||+++.++.+||+|||+|+..............+++. |+|||.+..    ..++.++||||+||++|||++| .
T Consensus       138 DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~ksDI~S~Giil~el~t~~~  212 (285)
T d1fmka3         138 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALY----GRFTIKSDVWSFGILLTELTTKGR  212 (285)
T ss_dssp             CCSGGGEEECGGGCEEECCCCTTC--------------CCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             cccceEEEECCCCcEEEcccchhhhccCCCceeecccccccc-ccChHHHhC----CCCCcHHhhhcchHHHHHHHhCCC
Confidence            666999999999999999999998765443322333567777 999999988    7889999999999999999995 5


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|+.+ ....+.+..+..+..++. +..+|+++++++.
T Consensus       213 p~~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~  248 (285)
T d1fmka3         213 VPYPG-MVNREVLDQVERGYRMPC-PPECPESLHDLMC  248 (285)
T ss_dssp             CSSTT-CCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhcCCCCC-CcccCHHHHHHHH
Confidence            55555 566677777777776766 5668999999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=192.11  Aligned_cols=165  Identities=12%  Similarity=0.121  Sum_probs=123.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++. +.++.+ +...++++||++.++++.+.+.                  ..+..|||+.+++|+   |
T Consensus        53 ~il~~l~HpnIv~-~~~~~~-~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHr---D  127 (321)
T d1tkia_          53 SILNIARHRNILH-LHESFE-SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF---D  127 (321)
T ss_dssp             HHHHHSCCTTBCC-EEEEEE-ETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---C
T ss_pred             HHHHhCCCCCCCe-EEEEEE-ECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcc---c
Confidence            4788999988764 444444 4677999999999999887531                  012347777665555   5


Q ss_pred             CCCCcEEEcCC--CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         65 FSVDTFHQRLQ--FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        65 lk~~nil~~~~--~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                      |||+||+++.+  ..+||+|||++........  .....+++. |+|||.+.+    ..++.++||||+||++|+|++|.
T Consensus       128 lKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~--~~~~~~t~~-y~ape~~~~----~~~~~~~DiWSlGvily~ll~G~  200 (321)
T d1tkia_         128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPE-YYAPEVHQH----DVVSTATDMWSLGTLVYVLLSGI  200 (321)
T ss_dssp             CCGGGEEESSSSCCCEEECCCTTCEECCTTCE--EEEEESCGG-GSCHHHHTT----CEECHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccceeecCCCceEEEEcccchhhccccCCc--ccccccccc-cccchhccC----CCCCchhhcccHHHHHHHHHhCC
Confidence            55999999854  4799999999977654332  222567788 999999988    78899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      +||.+ ....+.+.++..+. ..++.   ..+|+++++||++
T Consensus       201 ~Pf~~-~~~~~~~~~i~~~~-~~~~~~~~~~~s~~~~~li~~  240 (321)
T d1tkia_         201 NPFLA-ETNQQIIENIMNAE-YTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             CTTCC-SSHHHHHHHHHHTC-CCCCHHHHTTSCHHHHHHHHT
T ss_pred             CCCCC-CCHHHHHHHHHhCC-CCCChhhccCCCHHHHHHHHH
Confidence            99998 56667777777765 33332   3689999999864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.8e-30  Score=184.90  Aligned_cols=163  Identities=17%  Similarity=0.213  Sum_probs=118.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++.. .++...+...+++++||...+++.+.+..                   .+..|||+.+   +.|+
T Consensus        52 ~~l~~l~HpnIv~~-~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~  127 (262)
T d1byga_          52 SVMTQLRHSNLVQL-LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR  127 (262)
T ss_dssp             HHHTTCCCTTBCCE-EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             HHHHhCCCCCEeeE-EEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc---eecc
Confidence            46778888877644 44443345668999999999999886521                   1234677665   4555


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      |+||+||+++.++.+|++|||+++......    ....++.. |+|||.+..    ..++.++|||||||++|||+| |.
T Consensus       128 dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~----~~~~~~~~-y~aPE~l~~----~~~t~~sDIwSfG~il~el~t~~~  198 (262)
T d1byga_         128 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVK-WTAPEALRE----KKFSTKSDVWSFGILLWEIYSFGR  198 (262)
T ss_dssp             CCSGGGEEECTTSCEEECCCCC----------------CCTT-TSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccchHhheecCCCCEeecccccceecCCCC----cccccccc-CCChHHHhC----CCCChHHHHHhHHHHHHHHHHCCC
Confidence            566999999999999999999997654332    22456777 999999987    788999999999999999998 78


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||.. ....+....+..+..+++ |..+|++++++++
T Consensus       199 ~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~  234 (262)
T d1byga_         199 VPYPR-IPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMK  234 (262)
T ss_dssp             CSCTT-SCGGGHHHHHTTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CccCCHHHHHHHH
Confidence            99887 456577777777877878 4568999999886

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-30  Score=192.26  Aligned_cols=164  Identities=16%  Similarity=0.219  Sum_probs=113.7

Q ss_pred             HHhCCCCcEEEEEEeee---cCCCceEEEeccCccchHHHHHHH-------------------HHHHHHhhcchhccccc
Q psy17162          6 AVFNQDEIGVTVSSVKT---TDDKKVVLVTGKGEAEKVQKELET-------------------LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         6 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~-------------------~~~~~l~~~~~~h~~~~   63 (182)
                      +..+|+|++. +.++.+   ..+..++++|||+.+++|.+.+..                   .+..|||+.+++|+   
T Consensus        60 ~~~~hpnIv~-l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHR---  135 (335)
T d2ozaa1          60 RASQCPHIVR-IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR---  135 (335)
T ss_dssp             HHTTSTTBCC-EEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECC---
T ss_pred             HhcCCCCCCe-EEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccc---
Confidence            3446666654 444432   245678899999999999886411                   12347777765555   


Q ss_pred             CCCCCcEEEcC---CCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         64 YFSVDTFHQRL---QFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        64 ~lk~~nil~~~---~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |+||+||+++.   .+.+||+|||+|+.......  ....+|++. |+|||++.+    ..|+.++||||+||++|+|++
T Consensus       136 DiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~----~~y~~~~DiwSlGvily~llt  208 (335)
T d2ozaa1         136 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPY-YVAPEVLGP----EKYDKSCDMWSLGVIMYILLC  208 (335)
T ss_dssp             CCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC--CCCCSCCCS-SCCCCCCCG----GGGSHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccceeeeccCCCc--cccccCCcc-cCCcHHHcC----CCCCHHHHHHhhchhHHHHhh
Confidence            55599999986   46799999999977654433  334789999 999999988    789999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHH---HHhhCCCCCCCC---CCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLK---QVVQDDPPRLPP---GEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~---~i~~~~~~~~~~---~~~s~~~~~~i~~  181 (182)
                      |++||.+. .......   .........+|.   ..+|+++++||++
T Consensus       209 g~~Pf~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  254 (335)
T d2ozaa1         209 GYPPFYSN-HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN  254 (335)
T ss_dssp             SSCSCEET-TCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHH
T ss_pred             CCCCCCCC-CHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHH
Confidence            99999773 2222222   112222233432   2589999999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-29  Score=186.62  Aligned_cols=171  Identities=19%  Similarity=0.204  Sum_probs=122.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHHH-----------------HHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELETL-----------------RCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----------------~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++|+|+++.+.+... +...+++++|+..++++.+.+...                 +..|+|+.+++   |||+
T Consensus        80 ~il~~l~h~pnIv~~~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~iv---HrDi  155 (322)
T d1vzoa_          80 QVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGII---YRDI  155 (322)
T ss_dssp             HHHHHHHTCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCC
T ss_pred             HHHHhccCCCeEEEeeeeec-cCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEE---eccC
Confidence            47888999777777777766 456788999999999988754211                 23467766655   5556


Q ss_pred             CCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCCC
Q psy17162         66 SVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFPY  145 (182)
Q Consensus        66 k~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~pf  145 (182)
                      ||+||+++.++.+||+|||+++..............|++. |++||.+....  ..++.++||||+||++|+|++|+.||
T Consensus       156 Kp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~-~~~pe~~~~~~--~~~~~ksDIWSlG~iLyelltG~~PF  232 (322)
T d1vzoa_         156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE-YMAPDIVRGGD--SGHDKAVDWWSLGVLMYELLTGASPF  232 (322)
T ss_dssp             CGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCT-TCCHHHHTTCC-----CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CccceeecCCCCEEEeeccchhhhcccccccccccccccc-cchhHHhhcCC--cCCCchhhhHHHHHHHHHHHhCCCCC
Confidence            6999999999999999999997665443322333678888 99999987511  34678999999999999999999999


Q ss_pred             CCCC--CcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        146 DTWG--SPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       146 ~~~~--~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+..  .....+........+++ |..+|+++++|+++
T Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~  269 (322)
T d1vzoa_         233 TVDGEKNSQAEISRRILKSEPPY-PQEMSALAKDLIQR  269 (322)
T ss_dssp             SCTTSCCCHHHHHHHHHHCCCCC-CTTSCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcccCCCCC-cccCCHHHHHHHHH
Confidence            7732  23333333333344556 45689999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-29  Score=188.37  Aligned_cols=165  Identities=19%  Similarity=0.152  Sum_probs=117.1

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH------------------HHHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE------------------TLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------------------~~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .++...  ...++++++...+.+.+.+.                  +.+..|||+.++   .|||
T Consensus        63 ~~l~~l~HpnIv~l-~g~~~~--~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i---iHrD  136 (317)
T d1xkka_          63 YVMASVDNPHVCRL-LGICLT--STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRD  136 (317)
T ss_dssp             HHHHHCCCTTBCCE-EEEEES--SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             HHHHhCCCCCEeeE-EEEEec--CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCc---ccCc
Confidence            37788889887754 444442  34566777777777665321                  112347777665   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-CC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-GR  142 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g~  142 (182)
                      +||+||+++.++.+||+|||+|+........ ......|+.. |+|||++..    ..++.++|||||||++|||+| |.
T Consensus       137 lKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~-y~APE~l~~----~~~~~~sDvwS~Gvil~el~t~g~  211 (317)
T d1xkka_         137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILH----RIYTHQSDVWSYGVTVWELMTFGS  211 (317)
T ss_dssp             CCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTT-TSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             chhhcceeCCCCCeEeeccccceecccccccccccccccCcc-ccChHHHhc----CCCChhhhhhhHHHHHHHHHHCCC
Confidence            6699999999999999999998765432221 1122456777 999999988    789999999999999999998 89


Q ss_pred             CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        143 FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +||.+ ....+....+..+..++. |..+|++++++++
T Consensus       212 ~p~~~-~~~~~~~~~i~~~~~~~~-p~~~~~~~~~li~  247 (317)
T d1xkka_         212 KPYDG-IPASEISSILEKGERLPQ-PPICTIDVYMIMV  247 (317)
T ss_dssp             CTTTT-SCGGGHHHHHHHTCCCCC-CTTBCHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHcCCCCCC-CcccCHHHHHHHH
Confidence            99988 345455566667776666 5668999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-28  Score=181.47  Aligned_cols=139  Identities=17%  Similarity=0.174  Sum_probs=103.7

Q ss_pred             hCCCCcEEEEEEee---ecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccccC
Q psy17162          8 FNQDEIGVTVSSVK---TTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         8 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~~~   64 (182)
                      ++|+|++..+..+.   ......++++++++.++.+...                    +.++  .|||+.+++|+   |
T Consensus        67 ~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL--~yLH~~~ivHr---D  141 (305)
T d1blxa_          67 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL--DFLHSHRVVHR---D  141 (305)
T ss_dssp             TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH--HHHHHTTCCCC---C
T ss_pred             cCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHH--HHHHhCCEEec---C
Confidence            46777764433322   1234567789999877654321                    2333  47887765555   5


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      +||+|||++.++.+||+|||.+........  ....+||+. |+|||++.+    ..++.++||||+||++|+|++|++|
T Consensus       142 iKp~NILi~~~~~~kl~dfg~~~~~~~~~~--~~~~~gT~~-Y~APE~~~~----~~y~~~~DiwSlG~il~ell~g~~p  214 (305)
T d1blxa_         142 LKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLW-YRAPEVLLQ----SSYATPVDLWSVGCIFAEMFRRKPL  214 (305)
T ss_dssp             CCGGGEEECTTCCEEECSCCSCCCCCGGGG--GCCCCCCCT-TCCHHHHTT----CCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCccEEEEcCCCCeeecchhhhhhhccccc--CCCcccChh-hcCcchhcC----CCCChhehhhchHHHHHHHHHCCCC
Confidence            559999999999999999999877655443  344789999 999999988    7899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHh
Q psy17162        145 YDTWGSPFEQLKQVV  159 (182)
Q Consensus       145 f~~~~~~~~~~~~i~  159 (182)
                      |.+ .++.+.+.++.
T Consensus       215 f~~-~~~~~~~~~i~  228 (305)
T d1blxa_         215 FRG-SSDVDQLGKIL  228 (305)
T ss_dssp             CCC-SSHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHH
Confidence            998 46666666654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.6e-29  Score=185.66  Aligned_cols=166  Identities=17%  Similarity=0.185  Sum_probs=123.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------------------------
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------------------------   46 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------------------------   46 (182)
                      .+++.++|+|++.....+ . +...+++++++...+++.+.+..                                    
T Consensus        68 ~il~~l~h~niv~~~~~~-~-~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  145 (301)
T d1lufa_          68 ALMAEFDNPNIVKLLGVC-A-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI  145 (301)
T ss_dssp             HHHHTCCCTTBCCEEEEE-C-SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHH
T ss_pred             HHHHhcCCCCcccceeee-c-cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHH
Confidence            477888898877554433 3 45678899999988887765421                                    


Q ss_pred             -----HHHHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCC
Q psy17162         47 -----LRCIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPS  120 (182)
Q Consensus        47 -----~~~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~  120 (182)
                           .+.+|+|+.+++   |+||||+||+++.++.+||+|||+|+........ ..+...+++. |+|||.+..    .
T Consensus       146 ~~qi~~gl~ylH~~~iv---HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~-y~aPE~~~~----~  217 (301)
T d1lufa_         146 ARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFY----N  217 (301)
T ss_dssp             HHHHHHHHHHHHHTTCC---CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGG-GCCHHHHHH----C
T ss_pred             HHHHHHHhhhcccCCeE---eeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcC-cCCHHHHcc----C
Confidence                 123467766655   5566699999999999999999998755433221 1222556777 999999988    7


Q ss_pred             CCCccchHHHHHHHHHHHHhCC-CCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        121 NYDIRSDVWSLGISLIELATGR-FPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       121 ~~~~~~Diwslg~~l~~l~~g~-~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      .++.++|||||||++|||++|. +||.+ ....+....+..+..+++ |..+|++++++++
T Consensus       218 ~~t~ksDVwS~Gvvl~ell~~~~~p~~~-~~~~e~~~~v~~~~~~~~-p~~~~~~~~~li~  276 (301)
T d1lufa_         218 RYTTESDVWAYGVVLWEIFSYGLQPYYG-MAHEEVIYYVRDGNILAC-PENCPLELYNLMR  276 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCChhhhhccchhhHHHHHccCCCCCCC-CCHHHHHHHHHcCCCCCC-CccchHHHHHHHH
Confidence            8999999999999999999984 78887 566677777777877766 5668999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-29  Score=183.60  Aligned_cols=166  Identities=14%  Similarity=0.166  Sum_probs=119.3

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~   64 (182)
                      ++++.++|+|++ .+.++..  ...+++++|++..+++.+.+..                  .+..|||+.++   .|+|
T Consensus        63 ~~l~~l~H~nIv-~~~g~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i---iHrD  136 (273)
T d1u46a_          63 NAMHSLDHRNLI-RLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF---IHRD  136 (273)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC--SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE---ECSC
T ss_pred             HHHHhCCCCCEE-EEEEEEe--ecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCE---eeee
Confidence            367888887776 4445444  2467899999988887764311                  12347887765   4555


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhh--hhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh-C
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLI--IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT-G  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~-g  141 (182)
                      |||+||+++.++.+||+|||+++.......  .......++.. |+|||++.+    ..++.++|||||||++|||+| |
T Consensus       137 ikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~-~~aPE~~~~----~~~~~~~Di~S~Gvil~emlt~G  211 (273)
T d1u46a_         137 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA-WCAPESLKT----RTFSHASDTWMFGVTLWEMFTYG  211 (273)
T ss_dssp             CCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGG-GCCHHHHHH----CEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             ecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcc-cCCHHHHhC----CCCCcchhhhhhHHHHHHHHhCC
Confidence            669999999999999999999987644322  11122345556 999999998    788999999999999999998 8


Q ss_pred             CCCCCCCCCcHHHHHHHhhC-CCCCCCCCCCCHHHHHHhhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQD-DPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~~~~i~~  181 (182)
                      .+||.+ .+..+...++..+ ..++. +..+|+++++++++
T Consensus       212 ~~Pf~~-~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~li~~  250 (273)
T d1u46a_         212 QEPWIG-LNGSQILHKIDKEGERLPR-PEDCPQDIYNVMVQ  250 (273)
T ss_dssp             CCTTTT-CCHHHHHHHHHTSCCCCCC-CTTCCHHHHHHHHH
T ss_pred             CCCCCC-cCHHHHHHHHHhCCCCCCC-cccccHHHHHHHHH
Confidence            999998 4666667776654 34444 56789999998853

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4e-29  Score=185.24  Aligned_cols=164  Identities=16%  Similarity=0.177  Sum_probs=120.7

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH---------------------------------HHHH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE---------------------------------TLRC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------------------------------~~~~   49 (182)
                      ++..+ +|+|++ .+.+... +...+++++|+..++++.+.+.                                 +.+.
T Consensus        63 ~l~~l~~HpnIv-~~~~~~~-~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl  140 (309)
T d1fvra_          63 VLCKLGHHPNII-NLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM  140 (309)
T ss_dssp             HHTTCCCCTTBC-CEEEEEE-ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCEe-eEEEEEe-cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHH
Confidence            55666 466665 4444444 4667899999999988877542                                 0112


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVW  129 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diw  129 (182)
                      .|+|+.++   .|||+||+|||++.++.+||+|||+++.......  .....++.. |+|||.+..    ..++.++|||
T Consensus       141 ~~lH~~~i---iHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~-y~aPE~l~~----~~~~~~sDvw  210 (309)
T d1fvra_         141 DYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVR-WMAIESLNY----SVYTTNSDVW  210 (309)
T ss_dssp             HHHHHTTE---ECSCCSGGGEEECGGGCEEECCTTCEESSCEECC--C----CCTT-TCCHHHHHH----CEECHHHHHH
T ss_pred             HhhhcCCc---cccccccceEEEcCCCceEEcccccccccccccc--ccceecCCc-ccchHHhcc----CCCCccceee
Confidence            46666655   5555669999999999999999999976554432  222457777 999999987    7889999999


Q ss_pred             HHHHHHHHHHhC-CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        130 SLGISLIELATG-RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       130 slg~~l~~l~~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      ||||++|+|++| .+||.+ ....+....+..+..+++ |..+|++++++|++
T Consensus       211 SfGvil~ell~~~~~p~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~  261 (309)
T d1fvra_         211 SYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEK-PLNCDDEVYDLMRQ  261 (309)
T ss_dssp             HHHHHHHHHHTTSCCTTTT-CCHHHHHHHGGGTCCCCC-CTTBCHHHHHHHHH
T ss_pred             hhHHHHHHHHhcCCCCCCC-CCHHHHHHHHHhcCCCCC-CccCCHHHHHHHHH
Confidence            999999999996 567877 466666777777777766 56789999998863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2e-28  Score=180.64  Aligned_cols=166  Identities=16%  Similarity=0.229  Sum_probs=121.6

Q ss_pred             HHHHh-CCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH-------------------------------HH--HH
Q psy17162          4 IRAVF-NQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE-------------------------------TL--RC   49 (182)
Q Consensus         4 il~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------------------------------~~--~~   49 (182)
                      ++..+ +|+|++ .+.+... ++..++++||++..+++.+.+.                               .+  +.
T Consensus        71 ~l~~~~~HpnIv-~~~~~~~-~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al  148 (299)
T d1fgka_          71 MMKMIGKHKNII-NLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM  148 (299)
T ss_dssp             HHHHHCCCTTBC-CEEEEEC-SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCeEE-ecccccc-cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHH
Confidence            34455 566665 5555555 4677899999999988877542                               00  12


Q ss_pred             HHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchH
Q psy17162         50 IYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDV  128 (182)
Q Consensus        50 ~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Di  128 (182)
                      .|||+.++   .|||+||+|||++.++.+||+|||++......... ......+++. |+|||.+..    ..++.++||
T Consensus       149 ~ylH~~~i---vHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-y~aPE~l~~----~~y~~k~Di  220 (299)
T d1fgka_         149 EYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFD----RIYTHQSDV  220 (299)
T ss_dssp             HHHHHTTC---CCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGG-GSCHHHHHH----CCCCHHHHH
T ss_pred             HHhhhCCE---EeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChh-hhhhhHhcC----CCCCchhhh
Confidence            36666654   55556699999999999999999999876543321 1222456677 999999988    789999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        129 WSLGISLIELAT-GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       129 wslg~~l~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |||||++|+|++ |.+||.+ ....+....+..+..++. |..+|+++++++++
T Consensus       221 wS~Gvvl~ell~~g~~p~~~-~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~~  272 (299)
T d1fgka_         221 WSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDK-PSNCTNELYMMMRD  272 (299)
T ss_dssp             HHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHHTTCCCCC-CSSCCHHHHHHHHH
T ss_pred             HHhHHHHHHhccCCCCCCCC-CCHHHHHHHHHcCCCCCC-CccchHHHHHHHHH
Confidence            999999999998 7999987 455555555666766666 56789999998863

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=178.41  Aligned_cols=157  Identities=16%  Similarity=0.206  Sum_probs=110.1

Q ss_pred             hHHHHhC--CCCcEEEEEEeeecCCCceEEEeccCcc-chHHHHHHH-----------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFN--QDEIGVTVSSVKTTDDKKVVLVTGKGEA-EKVQKELET-----------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~-----------------~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++  |+|+ +.+.+... +...+++++++..+ +++.+.+..                 .+..|||+.++   .|
T Consensus        59 ~il~~l~~~h~nI-v~~~~~~~-~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~i---iH  133 (273)
T d1xwsa_          59 VLLKKVSSGFSGV-IRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV---LH  133 (273)
T ss_dssp             HHHHHHCSSSCSB-CCEEEEEE-CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE---EC
T ss_pred             HHHHHhccCCCCc-cEEEEEEe-eCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC---cc
Confidence            3666776  4555 55666665 55678888888764 455543210                 11237776654   45


Q ss_pred             cCCCCCcEEEcCC-CeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCC-CccchHHHHHHHHHHHHh
Q psy17162         63 RYFSVDTFHQRLQ-FLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNY-DIRSDVWSLGISLIELAT  140 (182)
Q Consensus        63 ~~lk~~nil~~~~-~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~-~~~~Diwslg~~l~~l~~  140 (182)
                      ||+||+||+++.+ +.+||+|||+|.......   .+..+||+. |+|||++.+    ..+ +.++||||+||++|+|++
T Consensus       134 rDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~---~~~~~GT~~-y~aPE~~~~----~~~~~~~~DiwSlGvilyell~  205 (273)
T d1xwsa_         134 RDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV-YSPPEWIRY----HRYHGRSAAVWSLGILLYDMVC  205 (273)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTTCEECCSSC---BCCCCSCGG-GSCHHHHHH----SCBCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcccceEEecCCCeEEECccccceeccccc---ccccccCCC-cCCHHHHcC----CCCCCcccccccceeeehhHhh
Confidence            5566999999865 799999999997654433   234789999 999999876    444 577999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhhh
Q psy17162        141 GRFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFITL  181 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~~  181 (182)
                      |+.||.+.       ..+..+. ..+ +..+|+++++||++
T Consensus       206 g~~Pf~~~-------~~i~~~~-~~~-~~~~s~~~~~li~~  237 (273)
T d1xwsa_         206 GDIPFEHD-------EEIIRGQ-VFF-RQRVSSECQHLIRW  237 (273)
T ss_dssp             SSCSCCSH-------HHHHHCC-CCC-SSCCCHHHHHHHHH
T ss_pred             CCCCCCCc-------hHHhhcc-cCC-CCCCCHHHHHHHHH
Confidence            99999761       1233443 344 45689999999863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-28  Score=180.30  Aligned_cols=168  Identities=14%  Similarity=0.136  Sum_probs=119.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHH----------------H--HHHHHHhhcchhcccccC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELE----------------T--LRCIYIQDYHLCVRSTRY   64 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----------------~--~~~~~l~~~~~~h~~~~~   64 (182)
                      .+++.++|+|++.. .+.....+..+++++|++.++++.+.+.                .  .+..|+|+.++   .|+|
T Consensus        80 ~~l~~l~HpnIv~~-~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~i---iHrD  155 (311)
T d1r0pa_          80 IIMKDFSHPNVLSL-LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF---VHRD  155 (311)
T ss_dssp             HHHHTCCCTTBCCC-CEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC---CCSC
T ss_pred             HHHHhCCCCCEeEE-eEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCc---ccCC
Confidence            46778888888744 3343435667889999999998877431                0  11236666654   5566


Q ss_pred             CCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhC
Q psy17162         65 FSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATG  141 (182)
Q Consensus        65 lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g  141 (182)
                      +||+|||++.++.+||+|||+++........   ......|+.. |+|||.+..    ..++.++||||||+++|||++|
T Consensus       156 LK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~ksDI~SfGivl~El~t~  230 (311)
T d1r0pa_         156 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALESLQT----QKFTTKSDVWSFGVLLWELMTR  230 (311)
T ss_dssp             CSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGG-GSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccHHhEeECCCCCEEEecccchhhccccccccceeccccccccc-ccChHHHhc----CCCCChhHhhhhHHHHHHHHHC
Confidence            6699999999999999999999875443221   1122456677 999999987    7889999999999999999997


Q ss_pred             CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        142 RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       142 ~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ..||.......+....+..+..+.. |..+++++++++.
T Consensus       231 ~~p~~~~~~~~~~~~~i~~g~~~~~-p~~~~~~l~~li~  268 (311)
T d1r0pa_         231 GAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVML  268 (311)
T ss_dssp             SCCSCC------CHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCC-cccCcHHHHHHHH
Confidence            7777653455556666777776666 5678999999875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.4e-28  Score=178.28  Aligned_cols=166  Identities=17%  Similarity=0.232  Sum_probs=123.5

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH---------------------------HHHHHHhhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET---------------------------LRCIYIQDY   55 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------------------------~~~~~l~~~   55 (182)
                      ++++.++|+|++.. .++.. ....+++++|++.++++.+.+..                           .+..|||+.
T Consensus        75 ~il~~l~h~nIv~~-~~~~~-~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~  152 (308)
T d1p4oa_          75 SVMKEFNCHHVVRL-LGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN  152 (308)
T ss_dssp             HHGGGCCCTTBCCE-EEEEC-SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCCCEeee-eeEEe-cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            46778888887644 44443 45678999999998887764321                           112466666


Q ss_pred             chhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh-hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         56 HLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII-RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        56 ~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      ++   .|+|+||+|||++.++.+||+|||+|+........ ......+++. |+|||.+..    ..++.++|+||+||+
T Consensus       153 ~i---vHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~-y~aPe~l~~----~~~~~~~Dv~S~G~i  224 (308)
T d1p4oa_         153 KF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKD----GVFTTYSDVWSFGVV  224 (308)
T ss_dssp             TC---BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGG-GCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred             Ce---eeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccc-cCCHHHHcc----CCCCcccccccHHHH
Confidence            54   55666699999999999999999999765443221 1222457777 999999988    788899999999999


Q ss_pred             HHHHHhC-CCCCCCCCCcHHHHHHHhhCCCCCCCCCCCCHHHHHHhh
Q psy17162        135 LIELATG-RFPYDTWGSPFEQLKQVVQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       135 l~~l~~g-~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|||+|| .+||.+ ....+.+..+..+..++. |..+|+.+++++.
T Consensus       225 l~El~t~~~~p~~~-~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~  269 (308)
T d1p4oa_         225 LWEIATLAEQPYQG-LSNEQVLRFVMEGGLLDK-PDNCPDMLFELMR  269 (308)
T ss_dssp             HHHHHHTSCCTTTT-SCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHH
T ss_pred             HHHHHhCCCCCCCC-CCHHHHHHHHHhCCCCCC-cccchHHHHHHHH
Confidence            9999997 588887 466677777777776666 5668999998775

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.4e-28  Score=178.52  Aligned_cols=166  Identities=16%  Similarity=0.139  Sum_probs=119.3

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH-----------------------------------HH
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET-----------------------------------LR   48 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------------------------------~~   48 (182)
                      +++.+.++++++.+.+... +...++++||++.++++.+.+..                                   .+
T Consensus        79 ~~~~l~~HpnIv~~~g~~~-~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~g  157 (311)
T d1t46a_          79 VLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG  157 (311)
T ss_dssp             HHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCEEEEEEEEe-eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHH
Confidence            5666754445556666665 45668999999998876654321                                   01


Q ss_pred             HHHHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhh-hhcccCCCCCCcccCccccCCCCCCCCCCccch
Q psy17162         49 CIYIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLI-IRGLYGADCDPNFIRPERIDPSGNPSNYDIRSD  127 (182)
Q Consensus        49 ~~~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~D  127 (182)
                      ..|||+.+++   ||||||+||+++.++.+|++|||.++....... ......++++. |+|||.+..    ..++.++|
T Consensus       158 l~~LH~~~iv---HrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~D  229 (311)
T d1t46a_         158 MAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMAPESIFN----CVYTFESD  229 (311)
T ss_dssp             HHHHHHTTCC---CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGG-GCCHHHHHH----CCCCHHHH
T ss_pred             HHHHHhCCee---ecccccccccccccCcccccccchheeccCCCcceEeeecccChH-HcCHHHhcC----CCCCCccc
Confidence            2477777655   555669999999999999999999987654322 11233566777 999999987    78899999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCcHHHHHHH-hhCCCCCCCCCCCCHHHHHHhh
Q psy17162        128 VWSLGISLIELAT-GRFPYDTWGSPFEQLKQV-VQDDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       128 iwslg~~l~~l~~-g~~pf~~~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~~i~  180 (182)
                      ||||||++|+|+| |++||.+. ...+.+..+ ..+.++.. +..+|++++++++
T Consensus       230 IwS~G~~l~ellt~g~p~~~~~-~~~~~~~~~i~~~~~~~~-~~~~~~~l~~Li~  282 (311)
T d1t46a_         230 VWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLS-PEHAPAEMYDIMK  282 (311)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTC-CSSHHHHHHHHHTCCCCC-CTTSCHHHHHHHH
T ss_pred             ccchHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhcCCCCCC-cccccHHHHHHHH
Confidence            9999999999998 67777773 443445454 45555554 5678999999875

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.8e-28  Score=177.40  Aligned_cols=144  Identities=19%  Similarity=0.160  Sum_probs=104.6

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH--------------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE--------------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .|++.++|+|++. +.+... +...+++++|++..+.....                    +.++  .|||+.+++|+  
T Consensus        53 ~il~~l~Hp~Iv~-~~~~~~-~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L--~yLH~~~IiHr--  126 (298)
T d1gz8a_          53 SLLKELNHPNIVK-LLDVIH-TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL--AFCHSHRVLHR--  126 (298)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-ETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHH--HHHHHTTCCCS--
T ss_pred             HHHHhCCCCcEEE-eccccc-cccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHH--HHhhcCCEEcc--
Confidence            3678888887764 445544 46678999999876543321                    2333  48887765555  


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                       |+||+||+++.++.+||+|||.|+........ .....|++. |+|||++..   ...++.++|+||+||++|+|++|+
T Consensus       127 -DiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~-~~~~~gt~~-y~apE~~~~---~~~~~~~~DiwSlGvily~m~~G~  200 (298)
T d1gz8a_         127 -DLKPQNLLINTEGAIKLADFGLARAFGVPVRT-YTHEVVTLW-YRAPEILLG---CKYYSTAVDIWSLGCIFAEMVTRR  200 (298)
T ss_dssp             -CCCGGGEEECTTSCEEECSTTHHHHHCCCSBC-TTCCBCCCT-TCCHHHHTT---CSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             -ccCchheeecccCcceeccCCcceeccCCccc-ceeecccce-eeehhhhcc---ccCCCccccccccchhhhHHhhCC
Confidence             55599999999999999999998665443322 222578888 999999876   123468999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHh
Q psy17162        143 FPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~  159 (182)
                      .||.+ .+..+.+.++.
T Consensus       201 ~Pf~~-~~~~~~~~~i~  216 (298)
T d1gz8a_         201 ALFPG-DSEIDQLFRIF  216 (298)
T ss_dssp             CSCCC-SSHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHH
Confidence            99988 45556665543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.5e-27  Score=175.99  Aligned_cols=144  Identities=20%  Similarity=0.209  Sum_probs=103.4

Q ss_pred             hHHHHhCCCCcEEEEEEeee----cCCCceEEEeccCccch---HHH-------------------HHHHHHHHHHhhcc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT----TDDKKVVLVTGKGEAEK---VQK-------------------ELETLRCIYIQDYH   56 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---l~~-------------------~l~~~~~~~l~~~~   56 (182)
                      .|++.++|+|++.....+..    .+...++++|||+..+.   +.+                   .+.++  .|||+.+
T Consensus        65 ~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL--~yLH~~~  142 (350)
T d1q5ka_          65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL--AYIHSFG  142 (350)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--HHHHTTT
T ss_pred             HHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHH--HHHHhcC
Confidence            47888999888755444332    23455789999987653   211                   12333  3777766


Q ss_pred             hhcccccCCCCCcEEEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHH
Q psy17162         57 LCVRSTRYFSVDTFHQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISL  135 (182)
Q Consensus        57 ~~h~~~~~lk~~nil~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l  135 (182)
                      ++|   |||||+|||++.++ .+||+|||++........  ....+|+.. |+|||.+.+   ...++.++||||+||++
T Consensus       143 IiH---rDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~-y~aPE~~~~---~~~~~~~~DIwSlG~il  213 (350)
T d1q5ka_         143 ICH---RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRY-YRAPELIFG---ATDYTSSIDVWSAGCVL  213 (350)
T ss_dssp             EEC---CCCCGGGEEECTTTCCEEECCCTTCEECCTTSC--CCSCCSCTT-SCCHHHHTT---CSSCCTHHHHHHHHHHH
T ss_pred             Ccc---cCCCcceEEEecCCCceeEecccchhhccCCcc--ccccccccc-ccChHHhhc---ccCCCcceeecccceEE
Confidence            555   55559999999875 899999999876654433  333678888 999998775   14688999999999999


Q ss_pred             HHHHhCCCCCCCCCCcHHHHHHH
Q psy17162        136 IELATGRFPYDTWGSPFEQLKQV  158 (182)
Q Consensus       136 ~~l~~g~~pf~~~~~~~~~~~~i  158 (182)
                      |+|++|++||.+ ....+.+..+
T Consensus       214 ~el~~g~~pf~~-~~~~~~l~~i  235 (350)
T d1q5ka_         214 AELLLGQPIFPG-DSGVDQLVEI  235 (350)
T ss_dssp             HHHHHTSCSSCC-SSHHHHHHHH
T ss_pred             EehhhCCCCCCC-CCHHHHHHHH
Confidence            999999999987 4555555554

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=1.1e-26  Score=170.30  Aligned_cols=143  Identities=18%  Similarity=0.185  Sum_probs=101.8

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      ++++.++|+|++. +.+... +...+++++++..++.+...                   +.++  +|||+.+++|   |
T Consensus        52 ~il~~l~hpnIv~-~~~~~~-~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L--~~LH~~~IvH---r  124 (286)
T d1ob3a_          52 SILKELKHSNIVK-LYDVIH-TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI--AYCHDRRVLH---R  124 (286)
T ss_dssp             HGGGGCCCTTBCC-EEEEEE-CSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHH--HHHHHTTCCC---S
T ss_pred             HHHHhCCCCcEEe-eeeecc-cCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHH--HHhccCcEEe---c
Confidence            4678888888874 445544 45667888888777665443                   2333  4788776555   5


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+|++|||.+............ ..+++. |+|||.+..   ...++.++|+||+||++|+|++|++
T Consensus       125 DiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~-~~~~~~-y~~pE~~~~---~~~~~~~~DiwslGv~l~el~~G~~  199 (286)
T d1ob3a_         125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EIVTLW-YRAPDVLMG---SKKYSTTIDIWSVGCIFAEMVNGTP  199 (286)
T ss_dssp             CCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCT-TCCHHHHTT---CCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCceeeEcCCCCEEecccccceecccCccccce-ecccch-hhhHHHHhC---CCCCCcceeehhcCcHHHHHHHCCC
Confidence            56699999999999999999998665443321122 467777 999999876   2456899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHH
Q psy17162        144 PYDTWGSPFEQLKQV  158 (182)
Q Consensus       144 pf~~~~~~~~~~~~i  158 (182)
                      ||.+ .+..+.+.++
T Consensus       200 pf~~-~~~~~~~~~i  213 (286)
T d1ob3a_         200 LFPG-VSEADQLMRI  213 (286)
T ss_dssp             SCCC-SSHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHH
Confidence            9988 4555555554

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.94  E-value=1.9e-26  Score=169.49  Aligned_cols=166  Identities=13%  Similarity=0.110  Sum_probs=111.7

Q ss_pred             HHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHHHHH------------------HHHHHHhhcchhcccccCC
Q psy17162          4 IRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKELET------------------LRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         4 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------------------~~~~~l~~~~~~h~~~~~l   65 (182)
                      +++.+.+.++++.+.++.. +....+++|+++. +++.+.+..                  ....|+|+.+   +.|||+
T Consensus        53 ~~~~l~~~~~i~~~~~~~~-~~~~~~~vme~~~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDi  127 (293)
T d1csna_          53 TYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLLG-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDI  127 (293)
T ss_dssp             HHHHTTTCTTCCCEEEEEE-ETTEEEEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCC
T ss_pred             HHHHhcCCCCCCEEEEEee-cCCccEEEEEecC-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccC
Confidence            5677888777777777776 5566788888874 555553210                  1123666555   555556


Q ss_pred             CCCcEEEcC-----CCeEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         66 SVDTFHQRL-----QFLLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        66 k~~nil~~~-----~~~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      ||+||+++.     ++.+||+|||+|+........      .....+||+. |+|||++.+    ..++.++|+||+|++
T Consensus       128 Kp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~-y~aPE~~~~----~~~~~~~DiwSlG~~  202 (293)
T d1csna_         128 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR-YMSINTHLG----REQSRRDDLEALGHV  202 (293)
T ss_dssp             CGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTT-TCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred             CccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchh-hcCHHHhcC----CCCChHHHHHHhhHH
Confidence            699999974     578999999999775433210      1123578999 999999988    789999999999999


Q ss_pred             HHHHHhCCCCCCCCCC--cHHHHHHHhhC---C-CCCCCCCCCCHHHHHHhh
Q psy17162        135 LIELATGRFPYDTWGS--PFEQLKQVVQD---D-PPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       135 l~~l~~g~~pf~~~~~--~~~~~~~i~~~---~-~~~~~~~~~s~~~~~~i~  180 (182)
                      +|+|++|+.||.+...  ......++...   . .+.+ ...+|+++.++++
T Consensus       203 l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~p~~l~~ii~  253 (293)
T d1csna_         203 FMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL-CAGFPEEFYKYMH  253 (293)
T ss_dssp             HHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH-TTTSCHHHHHHHH
T ss_pred             HHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh-cCCCCHHHHHHHH
Confidence            9999999999986322  22222232221   1 1111 2357788888765

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.93  E-value=3e-26  Score=170.93  Aligned_cols=138  Identities=17%  Similarity=0.136  Sum_probs=100.7

Q ss_pred             hHHHHhCCCCcEEEEEEeee-cCCCceEEEeccCccchHHHH----------------HHHHHHHHHhhcchhcccccCC
Q psy17162          3 SIRAVFNQDEIGVTVSSVKT-TDDKKVVLVTGKGEAEKVQKE----------------LETLRCIYIQDYHLCVRSTRYF   65 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~----------------l~~~~~~~l~~~~~~h~~~~~l   65 (182)
                      .+++.++++++++.+.++.. .....++++||++..+++.+.                +.++  .|||+.+++|+   |+
T Consensus        81 ~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL--~~LH~~gIvHr---Di  155 (328)
T d3bqca1          81 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKAL--DYCHSMGIMHR---DV  155 (328)
T ss_dssp             HHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHH--HHHHHTTEECC---CC
T ss_pred             HHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHH--HHHhhcccccc---cc
Confidence            36778874444455555544 455678899999888776542                2333  38887765555   55


Q ss_pred             CCCcEEEcCCC-eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCCC
Q psy17162         66 SVDTFHQRLQF-LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRFP  144 (182)
Q Consensus        66 k~~nil~~~~~-~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~p  144 (182)
                      ||+|||++.++ .+||+|||+|........  ....++++. |+|||.+..   ...++.++|+||+||++|++++|..|
T Consensus       156 Kp~NILi~~~~~~vkl~DFG~a~~~~~~~~--~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwslG~~l~e~~~g~~p  229 (328)
T d3bqca1         156 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRY-FKGPELLVD---YQMYDYSLDMWSLGCMLASMIFRKEP  229 (328)
T ss_dssp             SGGGEEEETTTTEEEECCGGGCEECCTTCC--CCSCCSCGG-GCCHHHHTT---CCCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             cccceEEcCCCCeeeecccccceeccCCCc--ccccccCcc-ccCcccccC---CCCCCcccchhhhhhhhHHhccCCCC
Confidence            59999998764 699999999976654433  333677888 999999876   13578999999999999999999999


Q ss_pred             CCCCCCc
Q psy17162        145 YDTWGSP  151 (182)
Q Consensus       145 f~~~~~~  151 (182)
                      |......
T Consensus       230 f~~~~~~  236 (328)
T d3bqca1         230 FFHGHDN  236 (328)
T ss_dssp             SSCCSSH
T ss_pred             CCCCchh
Confidence            9774443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.9e-26  Score=169.91  Aligned_cols=166  Identities=15%  Similarity=0.134  Sum_probs=110.7

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.+.++|++..+..... +....+++|+++........                   +.+  ..|||+.+   +.||
T Consensus        54 ~i~~~l~~~~~i~~~~~~~~-~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~--l~~lH~~~---iiHr  127 (299)
T d1ckia_          54 KIYKMMQGGVGIPTIRWCGA-EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISR--IEYIHSKN---FIHR  127 (299)
T ss_dssp             HHHHHSTTSTTCCCEEEEEE-ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHH--HHHHHHTT---EECS
T ss_pred             HHHHHccCCCcccEEEEEEe-cCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHH--HHHHHHCC---eeec
Confidence            47788889998877776665 45667788888754432221                   122  23666665   5555


Q ss_pred             CCCCCcEEEcC---CCeEEEeccCCCCCCCchhhh------hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         64 YFSVDTFHQRL---QFLLHLFRFALSGNQDDLLII------RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        64 ~lk~~nil~~~---~~~~kl~dfg~a~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                      ||||+||+++.   +..++++|||+|+........      ......|++. |+|||++.+    ..++.++||||+||+
T Consensus       128 DiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~----~~~~~~~DiwSlG~~  202 (299)
T d1ckia_         128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR-YASINTHLG----IEQSRRDDLESLGYV  202 (299)
T ss_dssp             CCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSS-SCCHHHHTT----BCCCHHHHHHHHHHH
T ss_pred             cCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCcc-ccCHHHHhC----CCCCChhhEEecCHH
Confidence            66699999864   356999999999876543221      1223578888 999999988    789999999999999


Q ss_pred             HHHHHhCCCCCCCCCCcH--HHHHHHhh----CCCCCCCCCCCCHHHHHHhh
Q psy17162        135 LIELATGRFPYDTWGSPF--EQLKQVVQ----DDPPRLPPGEFSSDFKDFIT  180 (182)
Q Consensus       135 l~~l~~g~~pf~~~~~~~--~~~~~i~~----~~~~~~~~~~~s~~~~~~i~  180 (182)
                      +|+|++|..||.+.....  ....+...    ...+.+ ...+|+++.++++
T Consensus       203 l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~li~  253 (299)
T d1ckia_         203 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL-CKGYPSEFATYLN  253 (299)
T ss_dssp             HHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHH-TTTSCHHHHHHHH
T ss_pred             HHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHh-ccCCCHHHHHHHH
Confidence            999999999998732211  11111111    111111 3467888888775

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-25  Score=166.44  Aligned_cols=147  Identities=17%  Similarity=0.110  Sum_probs=102.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeec------CCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcch
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT------DDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHL   57 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~   57 (182)
                      .+++.++|+|++.....+...      ....+++++|++..+.+...                   +.++.  |||+.+ 
T Consensus        61 ~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~--~lH~~~-  137 (318)
T d3blha1          61 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY--YIHRNK-  137 (318)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHH--HHHHTT-
T ss_pred             HHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHH--HhccCC-
Confidence            478889998887655443321      23457899999876665442                   23333  666665 


Q ss_pred             hcccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHH
Q psy17162         58 CVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGIS  134 (182)
Q Consensus        58 ~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~  134 (182)
                        +.||||||+||+++.++.+|++|||++.........   .....+||+. |+|||++..   ...++.++||||+||+
T Consensus       138 --ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~-Y~aPE~~~~---~~~~~~k~DiwSlGvi  211 (318)
T d3blha1         138 --ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW-YRPPELLLG---ERDYGPPIDLWGAGCI  211 (318)
T ss_dssp             --EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGG-GCCHHHHTT---CSSCCTHHHHHHHHHH
T ss_pred             --EEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHH-HhhHHHHcC---CCCCCcHHHcccCCce
Confidence              455556699999999999999999999765433221   1122568888 999999876   1468899999999999


Q ss_pred             HHHHHhCCCCCCCCCCcHHHHHHHh
Q psy17162        135 LIELATGRFPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       135 l~~l~~g~~pf~~~~~~~~~~~~i~  159 (182)
                      +|+|++|++||.+ ..+.+....+.
T Consensus       212 l~el~~g~~pf~~-~~~~~~~~~i~  235 (318)
T d3blha1         212 MAEMWTRSPIMQG-NTEQHQLALIS  235 (318)
T ss_dssp             HHHHHHSSCSCCC-SSHHHHHHHHH
T ss_pred             eeeHhhCCCCCCC-CCHHHHHHHHH
Confidence            9999999999988 45555555543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.4e-26  Score=170.28  Aligned_cols=139  Identities=21%  Similarity=0.218  Sum_probs=99.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC-----CCceEEEeccCccchHHHH------------------HHHHHHHHHhhcchhc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD-----DKKVVLVTGKGEAEKVQKE------------------LETLRCIYIQDYHLCV   59 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~------------------l~~~~~~~l~~~~~~h   59 (182)
                      .+++.++|+|++. +.++....     ...++++||++. .++.+.                  +.++  .|||+.+++|
T Consensus        69 ~il~~l~hpniv~-l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~~~~qi~~aL--~~LH~~~IiH  144 (346)
T d1cm8a_          69 RLLKHMRHENVIG-LLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGL--RYIHAAGIIH  144 (346)
T ss_dssp             HHHHHCCBTTBCC-CSEEECSCSSTTTCCCCEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHH--HHHHHTTEEC
T ss_pred             HHHHhcCCCCeeE-EEEEeccCccccccceEEEEEeccc-ccHHHHHHhccccHHHHHHHHHHHHHHH--HHHHhCCCcc
Confidence            4778898888764 33443322     235789999973 344432                  2333  3777776555


Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHH
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELA  139 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~  139 (182)
                         ||+||+||+++.++.+|++|||.|......    .+...+++. |+|||++.+   ...++.++||||+||++|+|+
T Consensus       145 ---rDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~-y~aPE~~~~---~~~~~~~~DiwSlGvil~ell  213 (346)
T d1cm8a_         145 ---RDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRW-YRAPEVILN---WMRYTQTVDIWSVGCIMAEMI  213 (346)
T ss_dssp             ---CCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGG-GCCTHHHHT---TTCCCTTHHHHHHHHHHHHHH
T ss_pred             ---cccCcchhhcccccccccccccceeccCCc----ccccccccc-ccCHHHHcC---CCCCCccchhhcchHHHHHHH
Confidence               555599999999999999999999765443    233678888 999999875   135679999999999999999


Q ss_pred             hCCCCCCCCCCcHHHHHH
Q psy17162        140 TGRFPYDTWGSPFEQLKQ  157 (182)
Q Consensus       140 ~g~~pf~~~~~~~~~~~~  157 (182)
                      +|.+||.+ ....+.+..
T Consensus       214 ~g~~pf~~-~~~~~~~~~  230 (346)
T d1cm8a_         214 TGKTLFKG-SDHLDQLKE  230 (346)
T ss_dssp             HSSCSSCC-SSHHHHHHH
T ss_pred             HCcCCCCC-CChHHHHHH
Confidence            99999988 344444433

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.2e-26  Score=167.49  Aligned_cols=139  Identities=13%  Similarity=0.055  Sum_probs=96.9

Q ss_pred             HhCCCCcEEEEEEeeecC--CCceEEEeccCccchHHHHHHH----------------HHHHHHhhcc-----hhccccc
Q psy17162          7 VFNQDEIGVTVSSVKTTD--DKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYH-----LCVRSTR   63 (182)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~-----~~h~~~~   63 (182)
                      .++|+|++.........+  ...++++|||+..+++.+.+..                ....|+|+..     ..++.|+
T Consensus        53 ~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHr  132 (303)
T d1vjya_          53 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR  132 (303)
T ss_dssp             TCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECS
T ss_pred             hCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeecc
Confidence            467878775443333222  2357899999999999886531                1234777642     2356788


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhh---hcccCCCCCCcccCccccCCCCCC--CCCCccchHHHHHHHHHHH
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLII---RGLYGADCDPNFIRPERIDPSGNP--SNYDIRSDVWSLGISLIEL  138 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~--~~~~~~~Diwslg~~l~~l  138 (182)
                      ||||+||+++.++.+||+|||+++........   ......|++. |+|||++......  ..++.++|||||||++|||
T Consensus       133 DlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~-y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el  211 (303)
T d1vjya_         133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR-YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI  211 (303)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGG-GCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccC-cCChhhccccccccCCCcCcchhhhhhHHHHHHH
Confidence            88899999999999999999998765443221   1223678888 9999998751110  1245689999999999999


Q ss_pred             HhCCCCCC
Q psy17162        139 ATGRFPYD  146 (182)
Q Consensus       139 ~~g~~pf~  146 (182)
                      +||.+||.
T Consensus       212 ~tg~~~~~  219 (303)
T d1vjya_         212 ARRCSIGG  219 (303)
T ss_dssp             HHTBCBTT
T ss_pred             hhCCCCCC
Confidence            99988774

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.4e-25  Score=165.64  Aligned_cols=144  Identities=21%  Similarity=0.165  Sum_probs=98.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecC----CCceEEEeccCccchHHHHHHH----------------HHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTD----DKKVVLVTGKGEAEKVQKELET----------------LRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~l~~~~~~h~~~   62 (182)
                      .|++.+.|+|++.. .++...+    ...+++++ +..+++|.+.+..                .+..|||+.+   +.|
T Consensus        58 ~il~~l~hp~iv~~-~~~~~~~~~~~~~~~~l~~-~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~---iiH  132 (345)
T d1pmea_          58 KILLRFRHENIIGI-NDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH  132 (345)
T ss_dssp             HHHHHCCCTTBCCC-CEEECCSSTTTCCCEEEEE-ECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             HHHHHcCCCCCCcE-EEEEeeccccccceEEEEE-eecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcC
Confidence            47888999888633 3333222    12345554 4556777775411                1223777665   455


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhh--hcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHh
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLII--RGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELAT  140 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~  140 (182)
                      |||||+|||++.++.+||+|||+|.........  .....+|++. |+|||++..   ...++.++|+||+||++|+|++
T Consensus       133 RDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~-y~aPE~l~~---~~~~~~~~DiwSlG~il~eml~  208 (345)
T d1pmea_         133 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW-YRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS  208 (345)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGG-GCCGGGTTT---BCSCSTHHHHHHHHHHHHHHHH
T ss_pred             CCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccce-echHHHhhc---CCCCCchhhhhccCceehHHhh
Confidence            556699999999999999999999765443221  1233567888 999999865   1456789999999999999999


Q ss_pred             CCCCCCCCCCcHHHHH
Q psy17162        141 GRFPYDTWGSPFEQLK  156 (182)
Q Consensus       141 g~~pf~~~~~~~~~~~  156 (182)
                      |++||.+ ....+...
T Consensus       209 g~~pf~~-~~~~~~~~  223 (345)
T d1pmea_         209 NRPIFPG-KHYLDQLN  223 (345)
T ss_dssp             SSCSCCC-SSHHHHHH
T ss_pred             CCCCCCC-CCHHHHHH
Confidence            9999987 34434433

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.9e-25  Score=166.54  Aligned_cols=144  Identities=16%  Similarity=0.187  Sum_probs=97.9

Q ss_pred             hHHHHhCCCCcEEEEEEeeec----CCCceEEEeccCccchHHHH----------------HHHHHHHHHhhcchhcccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT----DDKKVVLVTGKGEAEKVQKE----------------LETLRCIYIQDYHLCVRST   62 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~----------------l~~~~~~~l~~~~~~h~~~   62 (182)
                      .+++.++|+|++.....+...    +...+++++|++.++.+...                +.++  .|||+.+++|+| 
T Consensus        68 ~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl--~~LH~~giiHrD-  144 (355)
T d2b1pa1          68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI--KHLHSAGIIHRD-  144 (355)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSC-
T ss_pred             HHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHH--HHhhhccccccc-
Confidence            367889888776443333221    34678899999877655442                2333  377777655555 


Q ss_pred             cCCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCC
Q psy17162         63 RYFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGR  142 (182)
Q Consensus        63 ~~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~  142 (182)
                        +||+||+++.++.+|++|||.++.......  ....++++. |+|||++.+    ..++.++||||+||++|+|++|+
T Consensus       145 --lKP~Nil~~~~~~~kl~df~~~~~~~~~~~--~~~~~~t~~-y~aPE~l~~----~~~~~~~DiwSlG~~l~ell~g~  215 (355)
T d2b1pa1         145 --LKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMVRHK  215 (355)
T ss_dssp             --CCGGGEEECTTCCEEECCCCC-----------------CCT-TCCHHHHTT----CCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             --CCccccccccccceeeechhhhhccccccc--ccccccccc-ccChhhhcC----CCCCCCcccccccchHHHHhhCC
Confidence              559999999999999999999877655443  333678888 999999988    78899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHh
Q psy17162        143 FPYDTWGSPFEQLKQVV  159 (182)
Q Consensus       143 ~pf~~~~~~~~~~~~i~  159 (182)
                      +||.+ .+......++.
T Consensus       216 ~pF~~-~~~~~~~~~i~  231 (355)
T d2b1pa1         216 ILFPG-RDYIDQWNKVI  231 (355)
T ss_dssp             CSSCC-SSHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHH
Confidence            99988 45555554443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.6e-24  Score=156.99  Aligned_cols=144  Identities=19%  Similarity=0.133  Sum_probs=101.2

Q ss_pred             hHHHHhCCCCcEEEEEEeeecCCCceEEEeccCccchHHHH-------------------HHHHHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTTDDKKVVLVTGKGEAEKVQKE-------------------LETLRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------l~~~~~~~l~~~~~~h~~~~   63 (182)
                      .+++.++|+|++. +..... +...+++++++..++.+...                   +.++  .|||..+++   ||
T Consensus        53 ~il~~l~h~niv~-~~~~~~-~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL--~~lH~~~Iv---Hr  125 (292)
T d1unla_          53 CLLKELKHKNIVR-LHDVLH-SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL--GFCHSRNVL---HR  125 (292)
T ss_dssp             HHHTTCCCTTBCC-EEEEEE-CSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEE---CC
T ss_pred             HHHHhcCcCCEEe-eccccc-cccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHH--HHhhcCCEe---ee
Confidence            3677888887764 444444 45567788888777776553                   2233  477776555   45


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+||+|||.+......... .....++.. |+|||.+..   ...++.++||||+||++|+|++|..
T Consensus       126 DiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~-~~~pe~~~~---~~~~~~~~DiwSlG~il~ell~g~~  200 (292)
T d1unla_         126 DLKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLW-YRPPDVLFG---AKLYSTSIDMWSAGCIFAELANAGR  200 (292)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEECCSCCSC-CCSCCSCGG-GCCHHHHTT---CSCCCTHHHHHHHHHHHHHHTTTSC
T ss_pred             cccCcccccccCCceeeeecchhhcccCCCcc-ceeeccccc-hhhhhHhcc---CCCCCchhhccccchHHHHHhhCCC
Confidence            55599999999999999999999776544321 121344555 899998876   1346799999999999999999998


Q ss_pred             CCCCCCCcHHHHHHH
Q psy17162        144 PYDTWGSPFEQLKQV  158 (182)
Q Consensus       144 pf~~~~~~~~~~~~i  158 (182)
                      ||....+..+...++
T Consensus       201 p~~~~~~~~~~~~~~  215 (292)
T d1unla_         201 PLFPGNDVDDQLKRI  215 (292)
T ss_dssp             CSCCCSSHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHH
Confidence            875534555555544

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9e-25  Score=164.02  Aligned_cols=145  Identities=17%  Similarity=0.229  Sum_probs=97.0

Q ss_pred             hHHHHhCCCCcEEEEEEeeec---CCCceEEEeccCccchHHHHHH--------------H--HHHHHHhhcchhccccc
Q psy17162          3 SIRAVFNQDEIGVTVSSVKTT---DDKKVVLVTGKGEAEKVQKELE--------------T--LRCIYIQDYHLCVRSTR   63 (182)
Q Consensus         3 ~il~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~--------------~--~~~~~l~~~~~~h~~~~   63 (182)
                      .|++.++|+|++.....+...   ++...+.++++..+++|.+.+.              .  .++.|||+.+++|+   
T Consensus        69 ~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHr---  145 (348)
T d2gfsa1          69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR---  145 (348)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---
T ss_pred             HHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCccc---
Confidence            478889998887433333221   2233344455566778777431              0  12347777765555   


Q ss_pred             CCCCCcEEEcCCCeEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCCccchHHHHHHHHHHHHhCCC
Q psy17162         64 YFSVDTFHQRLQFLLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYDIRSDVWSLGISLIELATGRF  143 (182)
Q Consensus        64 ~lk~~nil~~~~~~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~~~~Diwslg~~l~~l~~g~~  143 (182)
                      |+||+||+++.++.+|++|||.+.......    ....|+.. |+|||....   ...++.++|+||+||++|+|++|++
T Consensus       146 DiKp~NILi~~~~~~kl~dfg~a~~~~~~~----~~~~g~~~-y~apE~~~~---~~~~~~~~DiwSlGv~l~~ll~g~~  217 (348)
T d2gfsa1         146 DLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRW-YRAPEIMLN---WMHYNQTVDIWSVGCIMAELLTGRT  217 (348)
T ss_dssp             CCCGGGEEECTTCCEEECCC----CCTGGG----SSSCHHHH-TSCHHHHTT---CSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCccccccccccccccccchhcccCccc----cccccccc-ccCchhhcC---CccCCcccchhhhhHHHHHHHhCCC
Confidence            555999999999999999999987654432    22567777 999998776   1345789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHh
Q psy17162        144 PYDTWGSPFEQLKQVV  159 (182)
Q Consensus       144 pf~~~~~~~~~~~~i~  159 (182)
                      ||.+ .+.......+.
T Consensus       218 pF~~-~~~~~~~~~i~  232 (348)
T d2gfsa1         218 LFPG-TDHIDQLKLIL  232 (348)
T ss_dssp             SCCC-SSHHHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHH
Confidence            9988 45445544443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=1.4e-20  Score=141.45  Aligned_cols=85  Identities=14%  Similarity=0.239  Sum_probs=67.6

Q ss_pred             HHhh-cchhcccccCCCCCcEEEcCCC------eEEEeccCCCCCCCchhhhhcccCCCCCCcccCccccCCCCCCCCCC
Q psy17162         51 YIQD-YHLCVRSTRYFSVDTFHQRLQF------LLHLFRFALSGNQDDLLIIRGLYGADCDPNFIRPERIDPSGNPSNYD  123 (182)
Q Consensus        51 ~l~~-~~~~h~~~~~lk~~nil~~~~~------~~kl~dfg~a~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~  123 (182)
                      |||+ .+   +.|||+||+||+++.++      .++++|||.+.......    ...++++. |+|||++..    ..++
T Consensus       140 ~lh~~~~---IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~----~~~~gt~~-y~aPE~~~~----~~~~  207 (362)
T d1q8ya_         140 YMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY----TNSIQTRE-YRSPEVLLG----APWG  207 (362)
T ss_dssp             HHHHTTC---EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC----CSCCSCGG-GCCHHHHHT----CCCC
T ss_pred             HHhhhcC---cccccCChhHeeeeccCcccccceeeEeeccccccccccc----cccccccc-ccChhhccc----cCCC
Confidence            7776 44   45556669999998664      48999999987654332    23678888 999999988    7889


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCC
Q psy17162        124 IRSDVWSLGISLIELATGRFPYDT  147 (182)
Q Consensus       124 ~~~Diwslg~~l~~l~~g~~pf~~  147 (182)
                      .++|+||+||++++|++|+.||.+
T Consensus       208 ~~~DiwSlG~il~el~~g~~pF~~  231 (362)
T d1q8ya_         208 CGADIWSTACLIFELITGDFLFEP  231 (362)
T ss_dssp             THHHHHHHHHHHHHHHHSSCCC--
T ss_pred             ccccccchHHHHHHHHHCCCCCCC
Confidence            999999999999999999999975

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.46  E-value=5.7e-08  Score=65.56  Aligned_cols=36  Identities=8%  Similarity=-0.052  Sum_probs=27.2

Q ss_pred             HHhhcchhcccccCCCCCcEEEcCCCeEEEeccCCCCCCC
Q psy17162         51 YIQDYHLCVRSTRYFSVDTFHQRLQFLLHLFRFALSGNQD   90 (182)
Q Consensus        51 ~l~~~~~~h~~~~~lk~~nil~~~~~~~kl~dfg~a~~~~   90 (182)
                      ++|..+++   |+|+||+||+++.+ .++|+|||.|....
T Consensus       118 ~lH~~gii---HrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2         118 KFYHRGIV---HGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             HHHHTTEE---CSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             HHhhCCEE---EccCChhheeeeCC-CEEEEECCCcccCC
Confidence            77776654   55555999999854 58999999986654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=86.50  E-value=0.17  Score=35.34  Aligned_cols=29  Identities=17%  Similarity=-0.019  Sum_probs=24.3

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      ..|.|+.++|++++.+...-+.||+.+..
T Consensus       185 iIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         185 VIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccCCcchhhhhcccccceeEeccccccc
Confidence            46777889999999887778999998754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.25  E-value=0.2  Score=33.74  Aligned_cols=28  Identities=11%  Similarity=0.036  Sum_probs=23.1

Q ss_pred             cccCCCCCcEEEcCCCeEEEeccCCCCC
Q psy17162         61 STRYFSVDTFHQRLQFLLHLFRFALSGN   88 (182)
Q Consensus        61 ~~~~lk~~nil~~~~~~~kl~dfg~a~~   88 (182)
                      .|.|+.|.||+++.++.+-|.||+.+..
T Consensus       186 ~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         186 SHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             ECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEeeccCcceeecCCceEEEeechhccc
Confidence            5888889999999766667999987744

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=85.26  E-value=0.22  Score=33.37  Aligned_cols=28  Identities=4%  Similarity=-0.123  Sum_probs=22.9

Q ss_pred             ccccCCCCCcEEEcCCCeEEEeccCCCC
Q psy17162         60 RSTRYFSVDTFHQRLQFLLHLFRFALSG   87 (182)
Q Consensus        60 ~~~~~lk~~nil~~~~~~~kl~dfg~a~   87 (182)
                      ..|.|+.|.||+++.++.+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            3688888999999977667899998763