Diaphorina citri psyllid: psy17260


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------68
MLRIGKYSMSAPAPAPRPGQPPRVHELGCEGISRSYVFRGTKDVPAQRLQEMLRIGKYSMSAPAPAPRPGQPGCEGISRSYVFRGTKDVPAQRLQEMLRIGKYSMSAPAPAPRPGQPPTPPVHKFLQPVEACEMSLTDLLGGLQKDPWPVHQGKRALRSTGVALSIAVGLLELKISMTTYEEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFTTIEYTIPKMQCAPLVFLFVVDTCMDEEELGALRDSLQMSLSLLPKNALVGLITFGQMVQVHELGCEGISRSYVFRGTKDVPAQRLQEMLRIGKYSMSAPAPAPRPGQPPRPARTQFLQPVEACEMYATDLLAALQKGPVAVHQGREHCGPTGVAHVIAVGLLEGTLIRSHNDIHKGNNKLPGRMATKITKGLALRAAYCRAIEYLLVPPWINGLLLEYELCLMGAIGPCVSLNLKNQCVSDQDLGMGGTASWKMCTLSPNTTLALFFEIVNQHGAPIPQGGPGCIQFITHYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLEGGAPVLTEDVSLQVFMEHLKKLAVSSTT
cccEEEEECccccccccccccccEEEEEcccccccccccccccccccccccccEEEEEcccccccccccccccccccccEEEccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccCEEEEcccccccHHHHHccccccEEEECccccccccccccccccccccccccEEEcccEEECccccEEEECccccccccccccccccccccccccccccCEEEEccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEEccccccccEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEcccccccccHHHHHHHccccccCEEccccccccccccccccccccEEEEcccccccEEEEEEEEccccccccccccEEEEEEEEEEcccccEEEEEEccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccHHHHHHHHccccccccc
*LRIGKYS***********QPPRVHELGCEGISRSYVFRGT**********MLRIGKYSMSAPAPAPRPGQP**EGI***YVF*****************************************FLQPVEACEMSLTDLLGGLQKDPWPVHQGKRALRSTGVALSIAVGLLELKISMTTYEEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFTTIEYTIPKMQCAPLVFLFVVDTCMDEEELGALRDSLQMSLSLLPKNALVGLITFGQMVQVHELGCEGISRSYVFRGTKDVPAQRLQEM*************************TQFLQPVEACEMYATDLLAALQKGPVAVHQGREHCGPTGVAHVIAVGLLEGTLIRSHNDIHKGNNKLPGRMATKITKGLALRAAYCRAIEYLLVPPWINGLLLEYELCLMGAIGPCVSLNLKNQCVSDQDLGMGGTASWKMCTLSPNTTLALFFEIVNQHGAPIPQGGPGCIQFITHYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLEGGAPVLTEDVSLQVFMEHLKKLAVS***
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MLRIGKYSMSAPAPAPRPGQPPRVHELGCEGISRSYVFRGTKDVPAQRLQEMLRIGKYSMSAPAPAPRPGQPGCEGISRSYVFRGTKDVPAQRLQEMLRIGKYSMSAPAPAPRPGQPPTPPVHKFLQPVEACEMSLTDLLGGLQKDPWPVHQGKRALRSTGVALSIAVGLLELKISMTTYEEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFTTIEYTIPKMQCAPLVFLFVVDTCMDEEELGALRDSLQMSLSLLPKNALVGLITFGQMVQVHELGCEGISRSYVFRGTKDVPAQRLQEMLRIGKYSMSAPAPAPRPGQPPRPARTQFLQPVEACEMYATDLLAALQKGPVAVHQGREHCGPTGVAHVIAVGLLEGTLIRSHNDIHKGNNKLPGRMATKITKGLALRAAYCRAIEYLLVPPWINGLLLEYELCLMGAIGPCVSLNLKNQCVSDQDLGMGGTASWKMCTLSPNTTLALFFEIVNQHGAPIPQGGPGCIQFITHYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLEGGAPVLTEDVSLQVFMEHLKKLAVSSTT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein transport protein Sec23A Component of the COPII coat, that covers ER-derived vesicles involved in transport from the endoplasmic reticulum to the Golgi apparatus. COPII acts in the cytoplasm to promote the transport of secretory, plasma membrane, and vacuolar proteins from the endoplasmic reticulum to the Golgi complex.confidentQ7SZE5
Protein transport protein Sec23A Component of the COPII coat, that covers ER-derived vesicles involved in transport from the endoplasmic reticulum to the Golgi apparatus. COPII acts in the cytoplasm to promote the transport of secretory, plasma membrane, and vacuolar proteins from the endoplasmic reticulum to the Golgi complex.confidentQ5R9P3
Protein transport protein Sec23A Component of the COPII coat, that covers ER-derived vesicles involved in transport from the endoplasmic reticulum to the Golgi apparatus. COPII acts in the cytoplasm to promote the transport of secretory, plasma membrane, and vacuolar proteins from the endoplasmic reticulum to the Golgi complex.confidentQ15436

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044425 [CC]membrane partprobableGO:0005575, GO:0016020
GO:0005488 [MF]bindingprobableGO:0003674
GO:0006888 [BP]ER to Golgi vesicle-mediated transportprobableGO:0051234, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0009987, GO:0051641, GO:0051179, GO:0044699, GO:0016482
GO:0006886 [BP]intracellular protein transportprobableGO:0033036, GO:0034613, GO:0046907, GO:0070727, GO:0006810, GO:0045184, GO:0008104, GO:0044763, GO:0044699, GO:0071702, GO:0015031, GO:0008150, GO:0009987, GO:0051234, GO:0051179, GO:0051649, GO:0051641
GO:0044767 [BP]single-organism developmental processprobableGO:0032502, GO:0008150, GO:0044699
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0048513 [BP]organ developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0012507 [CC]ER to Golgi transport vesicle membraneprobableGO:0043226, GO:0043229, GO:0030133, GO:0030135, GO:0030134, GO:0005737, GO:0005575, GO:0031982, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0030658, GO:0030659, GO:0012505, GO:0012506, GO:0031090, GO:0043227, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0044422
GO:0005795 [CC]Golgi stackprobableGO:0005737, GO:0005794, GO:0043231, GO:0043229, GO:0044464, GO:0044444, GO:0005623, GO:0005622, GO:0044446, GO:0044431, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0000139 [CC]Golgi membraneprobableGO:0005737, GO:0005794, GO:0031090, GO:0043229, GO:0016020, GO:0044464, GO:0044444, GO:0005623, GO:0005622, GO:0044446, GO:0044431, GO:0012505, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0009653 [BP]anatomical structure morphogenesisprobableGO:0032502, GO:0048856, GO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1M2O, chain A
Confidence level:very confident
Coverage over the Query: 186-385,399-678
View the alignment between query and template
View the model in PyMOL
Template: 1M2O, chain A
Confidence level:very confident
Coverage over the Query: 4-103,117-176
View the alignment between query and template
View the model in PyMOL
Template: 2NUP, chain A
Confidence level:very confident
Coverage over the Query: 179-381,401-650
View the alignment between query and template
View the model in PyMOL