Diaphorina citri psyllid: psy17302

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MKPSVLYLTPCVLTMLWVLLLLPLGHSFMLDGSQDSYAQLHKWNAALNGSLELEFKTEQPNGLILYTDDGGTYDFFEIKLVEGALRLRYNLGSGAQILTVGHDLNDGHWHSVRVKRRVEKTSLTVDNITQTRTSRGKEFRFGHVTSNSWVYIGGMPPWYNAKLTLLALPSVIFAGERVPVWSRHFQLVGGMPPWYNAKLTLLALPSVIFEPRFVGFIRNVIYADPHASGPRRQLAHSPPTPSLK
cccccEEEEccccccEEEEEEccccCEEEEcccccEEEEEccccccEEEEEEEEEEcccccEEEEEEcccccccEEEEEEEccEEEEEEEcccccEEEEEcccccccccEEEEEEECccEEEEEEcccCEEEEcccccccCCcccccccEEEccccccccccccccccccCEEEEEEEEEEEEEEECccccccccccccEECcccccccccccccccccEEEcccccccccccccccccccccc
*KPSVLYLTPCVLTMLWVLLLLPLGHSFMLDGSQDSYAQLHKWNAALNGSLELEFKTEQPNGLILYTDDGGTYDFFEIKLVEGALRLRYNLGSGAQILTVGHDLNDGHWHSVRVKRRVEKTSLTVDNITQTRTSRGKEFRFGHVTSNSWVYIGGMPPWYNAKLTLLALPSVIFAGERVPVWSRHFQLVGGMPPWYNAKLTLLALPSVIFEPRFVGFIRNVIYADPH******************
xxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKPSVLYLTPCVLTMLWVLLLLPLGHSFMLDGSQDSYAQLHKWNAALNGSLELEFKTEQPNGLILYTDDGGTYDFFEIKLVEGALRLRYNLGSGAQILTVGHDLNDGHWHSVRVKRRVEKTSLTVDNITQTRTSRGKEFRFGHVTSNSWVYIGGMPPWYNAKLTLLALPSVIFAGERVPVWSRHFQLVGGMPPWYNAKLTLLALPSVIFEPRFVGFIRNVIYADPHASGPRRQLAHSPPTPSLK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0007416 [BP]synapse assemblyprobableGO:0032502, GO:0050808, GO:0044707, GO:0007399, GO:0032501, GO:0009987, GO:0048856, GO:0016043, GO:0008150, GO:0022607, GO:0044763, GO:0071840, GO:0048731, GO:0007275, GO:0044699, GO:0044085
GO:0031594 [CC]neuromuscular junctionprobableGO:0005575, GO:0045202
GO:0007268 [BP]synaptic transmissionprobableGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0044699, GO:0003008
GO:0008306 [BP]associative learningprobableGO:0032501, GO:0044707, GO:0050877, GO:0050896, GO:0050890, GO:0007610, GO:0007611, GO:0008150, GO:0044699, GO:0044708, GO:0007612, GO:0003008
GO:0005488 [MF]bindingprobableGO:0003674
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421
GO:0016020 [CC]membraneprobableGO:0005575
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0005605 [CC]basal laminaprobableGO:0005604, GO:0005578, GO:0031012, GO:0005575, GO:0005576, GO:0044420, GO:0044421
GO:0044456 [CC]synapse partprobableGO:0005575, GO:0045202
GO:0097458 [CC]neuron partprobableGO:0005575, GO:0044464, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QCW, chain A
Confidence level:very confident
Coverage over the Query: 26-219
View the alignment between query and template
View the model in PyMOL