Diaphorina citri psyllid: psy17342


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
MDWAEAGESQISGTLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLKFITSG
ccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEccccccccccEEEEECccccccEEEEEcccccccccccccEEEEEEccccccccCEEECccccEEEEEECcccccEEEEEEccccEEEEEccccccccEEEcccccccccccEEEEEEEECccccEEEEEEccccEEEEEcccccccCEEEEcccccccccEEEEEEEECccccccEEEEEccccEEEEECcccccccccEEECcccccEEEEEEcccccccccccEEEEECccccEEEEEcccccCEEEEccccccEEEEEEccccccEEEEEEcccEEEEEEcccccCEEEEEEEEcccccEEEEEEcccccEEEEECccccEEEEEEcccccEEEEEcccc
*******ESQISGTLHGLQADWNEEGDPGLPQLPQDLQFDMTG****STKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQET********QTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLKFI***
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MDWAEAGESQISGTLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLKFITSG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cytoplasmic dynein 1 intermediate chain 2 Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. Involved in membrane-transport, such as Golgi apparatus, late endosomes and lysosomes.confidentO88487
Cytoplasmic dynein 1 intermediate chain 1 Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. May play a role in mediating the interaction of cytoplasmic dynein with membranous organelles and kinetochores.confidentO14576
Cytoplasmic dynein 1 intermediate chain 2 Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. Involved in membrane-transport, such as Golgi apparatus, late endosomes and lysosomes.confidentQ0III3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005868 [CC]cytoplasmic dynein complexprobableGO:0005737, GO:0043234, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0005856, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044430, GO:0043226, GO:0044424, GO:0030286, GO:0043228, GO:0005875, GO:0044422
GO:0003777 [MF]microtubule motor activityprobableGO:0016787, GO:0016818, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0003774
GO:0005874 [CC]microtubuleprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0000776 [CC]kinetochoreprobableGO:0043234, GO:0005575, GO:0005622, GO:0032991, GO:0043232, GO:0044464, GO:0005623, GO:0043226, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0000775, GO:0044422
GO:0005813 [CC]centrosomeprobableGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0000922 [CC]spindle poleprobableGO:0043234, GO:0005856, GO:0005819, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044422, GO:0044424, GO:0043228, GO:0043226, GO:0015630
GO:0005858 [CC]axonemal dynein complexprobableGO:0043229, GO:0043228, GO:0030286, GO:0043227, GO:0043226, GO:0005856, GO:0005575, GO:0005875, GO:0044430, GO:0015630, GO:0042995, GO:0005930, GO:0043234, GO:0032991, GO:0043231, GO:0043232, GO:0044463, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044447, GO:0044424, GO:0044422
GO:0008017 [MF]microtubule bindingprobableGO:0015631, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0047496 [BP]vesicle transport along microtubuleprobableGO:0051234, GO:0007017, GO:0046907, GO:0007018, GO:0006810, GO:0072384, GO:0030705, GO:0044765, GO:0010970, GO:0044763, GO:0044699, GO:0051648, GO:0051649, GO:0008150, GO:0009987, GO:0006928, GO:0051179, GO:0051640, GO:0051641
GO:0031982 [CC]vesicleprobableGO:0005575, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MKQ, chain A
Confidence level:very confident
Coverage over the Query: 1-30,55-84,95-390
View the alignment between query and template
View the model in PyMOL
Template: 2XYI, chain A
Confidence level:very confident
Coverage over the Query: 66-390
View the alignment between query and template
View the model in PyMOL
Template: 2OAJ, chain A
Confidence level:very confident
Coverage over the Query: 7-84,95-390
View the alignment between query and template
View the model in PyMOL