Diaphorina citri psyllid: psy1735


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
MSLLVRAEADDTRRRVKLYALNADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALSFQEKAGCDEIWEKICQVQGKDPSVEITQDIIEESEDERFDDMSDGSPPIELPPCEINRLEEIKELMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPGLHCLYDILKSIFLLNKTQLLDILFSDDIILDVVGCLEYDPALTSPKRHRHYLRTNSKFKEVVPISNSDLLGKIHQTYRIQYIQDVVLPTPSLFEDNILSTVSSFIYFNKIEIVTLIQFSQNLQPQAKENFYKTRDVE
ccccccccccccccEEEEEEEccccccCCcccCEEEEEEEcccccEEEEEEEccccccEEEEcccccccccccccEEEEEEcccccccEEEccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHccccccEEEEcccHHHHHHHHHHHHHcEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccc
**************RVKLYALNADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALSFQEKAGCDEIWEKICQVQGKDPSV***********************PIELPPCEINRLEEIKELMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPGLHCLYDILKSIFLLNKTQLLDILFSDDIILDVVGCLEYDPALTSPKRHRHYLRTNSKFKEVVPISNSDLLGKIHQTYRIQYIQDVVLPTPSLFEDNILSTVSSFIYFNKIEIVTLIQFSQNLQPQAKENFYKT****
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MSLLVRAEADDTRRRVKLYALNADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALSFQEKAGCDEIWEKICQVQGKDPSVEITQDIIEESEDERFDDMSDGSPPIELPPCEINRLEEIKELMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPGLHCLYDILKSIFLLNKTQLLDILFSDDIILDVVGCLEYDPALTSPKRHRHYLRTNSKFKEVVPISNSDLLGKIHQTYRIQYIQDVVLPTPSLFEDNILSTVSSFIYFNKIEIVTLIQFSQNLQPQAKENFYKTRDVE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine/threonine-protein phosphatase 4 regulatory subunit 3 Regulatory subunit of serine/threonine-protein phosphatase 4. The probable PP4 complex Pp4-19C-PPP4R2r-flfl (PPP4C-PPP4R2-PPP4R3) is required to prevent caspase induced cell death (in vitro). May be involved in DNA damage repair. Key mediator specific for the localization of mira and associated cell fate determinants during both interphase and mitosis. Nuclear Flfl is required to exclude mira/pros from the nucleus when inefficiently bound to the cytoskeleton/cortex, whereas cytosolic or membrane-associated flfl is required for the cortical association and asymmetric localization of mira/pros/brat/stau at metaphase and anaphase.confidentQ9VFS5
Serine/threonine-protein phosphatase 4 regulatory subunit 3A Regulatory subunit of serine/threonine-protein phosphatase 4. May regulate the activity of PPP4C at centrosomal microtubule organizing centers. The PPP4C-PPP4R2-PPP4R3A PP4 complex specifically dephosphorylates H2AFX phosphorylated on 'Ser-140' (gamma-H2AFX) generated during DNA replication and required for DNA DSB repair.confidentQ6P2K6
Serine/threonine-protein phosphatase 4 regulatory subunit 3 Regulatory subunit of serine/threonine-protein phosphatase 4.confidentQ5SP90

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0008105 [BP]asymmetric protein localizationprobableGO:0033036, GO:0008104, GO:0008150, GO:0051179
GO:0006470 [BP]protein dephosphorylationprobableGO:0071704, GO:0044267, GO:0044260, GO:0044238, GO:0016311, GO:0009987, GO:0043412, GO:0006464, GO:0043170, GO:0019538, GO:0006796, GO:0036211, GO:0008150, GO:0044237, GO:0008152, GO:0006793
GO:0006281 [BP]DNA repairprobableGO:0090304, GO:0034641, GO:0006807, GO:0044699, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:1901360, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0055059 [BP]asymmetric neuroblast divisionprobableGO:0030154, GO:0055057, GO:0048103, GO:0007405, GO:0007275, GO:0051301, GO:0048869, GO:0008150, GO:0044699, GO:0061351, GO:0032502, GO:0032501, GO:0008283, GO:0009987, GO:0044763, GO:0022008, GO:0017145, GO:0048699, GO:0045165, GO:0044707, GO:0007399, GO:0048856, GO:0048731, GO:0072089
GO:0030289 [CC]protein phosphatase 4 complexprobableGO:0043234, GO:0008287, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0016601 [BP]Rac protein signal transductionprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0050789, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0007265, GO:0007264, GO:0035556, GO:0044699
GO:0045722 [BP]positive regulation of gluconeogenesisprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:0031323, GO:0010906, GO:0010907, GO:0050789, GO:0080090, GO:0009891, GO:0010565, GO:0065007, GO:0006111, GO:0045913, GO:0009889, GO:0050794, GO:0048518, GO:0008150, GO:0010675, GO:0010676, GO:0043255, GO:0006109, GO:0048522
GO:0006911 [BP]phagocytosis, engulfmentprobableGO:0009987, GO:0006909, GO:0016192, GO:0016044, GO:0071840, GO:0006810, GO:0010324, GO:0008150, GO:0061024, GO:0044765, GO:0044763, GO:0016043, GO:0006897, GO:0051234, GO:0051179, GO:0044699
GO:0007391 [BP]dorsal closureprobableGO:0048598, GO:0002009, GO:0001700, GO:0048856, GO:0044707, GO:0032501, GO:0060429, GO:0016331, GO:0009888, GO:0044767, GO:0009790, GO:0009792, GO:0008150, GO:0048729, GO:0009653, GO:0032502, GO:0007275, GO:0044699
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RRP, chain B
Confidence level:confident
Coverage over the Query: 13-110
View the alignment between query and template
View the model in PyMOL