Diaphorina citri psyllid: psy17541

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------

MTQDSPVKSDNTLTKSQKRRNRKKLKTQKGILSCGKAQDNPKSSTSEASTTRTHSSECPNQFKQEIRDTPLTESEDNVNLCYECSNQGPINNKGLLLHAALNDYQSACQVSEQEVKQFFDSKGIYTYCSKPLSGNKEIPLYSATGPSSCKAPQFISCAEQLIYTSPSSVQTTPASLSQVTTAIMSEKNNSAELSRDLVKAQREAKKAAKLAAKQKAKVKGDVTAPPDAVTQPESKQSEPSKAKSKSEPSKEANVQNKPAQGSQDTPKPGGPPATLSNVDNKENVKSEGDEVKSKAQLKAERRAKQEQQRQAKAAALLEKTKTSNEKSMTKSKTEDSKPASEKSSKTEVLKSKDPNVPSTKKYSGVDGVKATPGTTLVHKVKLFNHLYRDNLSVTQPSEVHPAIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLTQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLRVKPTETQ

cccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHcccccccEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHccccEEEEcHHHHHHHcccccEEEEcccHHcccccHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHccccccc

*****************************************************************IRDTPLTESEDNVNLCYECSNQGPINNKGLLLHAALNDYQSACQVSEQEVKQFFDSKGIYTYCSKPLSGNKEIPLYSATGPSSCKAPQFISCAEQLIYT********************************************************************************************************************************************************************************************************************VHKVKLFNHLYRDNLSVTQPSEVHPAIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLTQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLRVKP****

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MTQDSPVKSDNTLTKSQKRRNRKKLKTQKGILSCGKAQDNPKSSTSEASTTRTHSSECPNQFKQEIRDTPLTESEDNVNLCYECSNQGPINNKGLLLHAALNDYQSACQVSEQEVKQFFDSKGIYTYCSKPLSGNKEIPLYSATGPSSCKAPQFISCAEQLIYTSPSSVQTTPASLSQVTTAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVKGDVTAPPDAVTQPESKQSEPSKAKSKSEPSKEANVQNKPAQGSQDTPKPGGPPATLSNVDNKENVKSEGDEVKSxxxxxxxxxxxxxxxxxxxxxALLEKTKTSNEKSMTKSKTEDSKPASEKSSKTEVLKSKDPNVPSTKKYSGVDGVKATPGTTLVHKVKLFNHLYRDNLSVTQPSEVHPAIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLTQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLRVKPTETQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Translation initiation factor eIF-2B subunit delta	Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.	confident	Q3T058

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0051716 [BP]	cellular response to stimulus	probable	GO:0008150, GO:0050896, GO:0009987, GO:0044763, GO:0044699
GO:0065007 [BP]	biological regulation	probable	GO:0008150
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0003743 [MF]	translation initiation factor activity	probable	GO:0097159, GO:0008135, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0009408 [BP]	response to heat	probable	GO:0009628, GO:0006950, GO:0008150, GO:0050896, GO:0009266
GO:0009749 [BP]	response to glucose stimulus	probable	GO:0009746, GO:1901700, GO:0009743, GO:0034284, GO:0050896, GO:0008150, GO:0042221, GO:0010033
GO:0043434 [BP]	response to peptide hormone stimulus	probable	GO:1901700, GO:0009719, GO:0050896, GO:0009725, GO:0010243, GO:1901698, GO:0008150, GO:1901652, GO:0042221, GO:0010033
GO:0005851 [CC]	eukaryotic translation initiation factor 2B complex	probable	GO:0043234, GO:0005737, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0031369 [MF]	translation initiation factor binding	probable	GO:0003674, GO:0005488, GO:0005515

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3A11, chain A
Confidence level:very confident
Coverage over the Query: 401-712
View the alignment between query and template
View the model in PyMOL

Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 231-257,274-335
View the alignment between query and template
View the model in PyMOL