Psyllid ID: psy17600

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
Protein Sequence
MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVSRNIT
Secondary Structure (PSIPRED)
cccccEEEEEEEEccccEEEEEEEccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEccccccccccccccHHHHcccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccccccHHHHHccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccEEccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccEEccHHHcHHHHHcccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHccHHHHcccccccccHHHHHccccHccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccEEccccEcccccccccccHHHHccccEccHHHHHHHHHHHHHHHccHHHHccccEccHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mkdyaclkqlrmsdpiNLYLIMeflpggdmmtLLMKKDTLSEECTQFYIAETALAIDSIHKLgfihrdikpdnllldarghiklsdfglctglkkshrtdfyrdlsqakpsdfsyppfcsenpqetYRKVMSWrdtlvfppevpiseEARETIVRFCSECDRRLGSARGVEELKSlgacqffrgvdwdhirerpaaipvqvksiddtsnfddfpdvkleipsaplpqdgeiiykdWVFINYTFkrfeanspfefslsstnpmdskrRAESWKKNRRALAystvgtpdyiapevflqtgygpaadwwSLGVIMYEMLIAPevflqtgygpaadwwSLGVIMYEMLIVSRNIT
Flexible Loop (DISEMBL)
MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSqakpsdfsyppfcsenPQETYRKVMSWRDTLVfppevpiseeaRETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPaaipvqvksiddtSNFDDFPDVKLEipsaplpqdgeiIYKDWVFINYTFKRFEANspfefslsstnpmdsKRRAESWKKNRRALAystvgtpdyiAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVSRNIT
Low Complexity Region (SEG)
MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVSRNIT
Disordered region (IsUnstruct)
***YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDL************FC*****ETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN**************************RALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVS****
Disordered Region (DISOPRED)
**DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLG*ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVK*********************INYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRAL********************YGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVSRN**
Disordered Region (DISEMBL)
MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLS****************NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVSRNIT
Disordered Region (DISPRO)
*KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFP*******SAPLPQ**EIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIV*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVSRNIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	351	2.2.26 [Sep-21-2011]
Q2LZZ7	458	Serine/threonine-protein	yes	N/A	0.666	0.510	0.654	1e-107
Q5R8M1	465	Serine/threonine-protein	yes	N/A	0.660	0.498	0.516	2e-77
Q15208	465	Serine/threonine-protein	yes	N/A	0.660	0.498	0.516	2e-77
A2VDV2	465	Serine/threonine-protein	no	N/A	0.660	0.498	0.510	1e-76
Q7TSE6	464	Serine/threonine-protein	yes	N/A	0.652	0.493	0.510	2e-76
Q9Y2H1	464	Serine/threonine-protein	no	N/A	0.652	0.493	0.516	2e-76
Q91VJ4	465	Serine/threonine-protein	no	N/A	0.660	0.498	0.510	2e-76
A8XJL7	472	Serine/threonine-protein	N/A	N/A	0.663	0.493	0.486	4e-68
Q2L6W9	476	Serine/threonine-protein	yes	N/A	0.663	0.489	0.483	2e-67
Q9NBK5	463	Serine/threonine-protein	yes	N/A	0.381	0.289	0.753	3e-59

>sp|Q2LZZ7|TRC_DROPS Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1

 Score =  387 bits (994), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 160 QDQVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 219

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 220 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 279

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 280 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 339

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI++FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 340 VMNWRETLIFPPEIPISEEAKETIIKFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 396

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 397 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 455

Query: 250 S 250
           +
Sbjct: 456 N 456

Has an important role, with fry, in controlling cell structure and proliferation of a variety of polarized outgrowths including epidermal hairs, bristles, arista laterals, and dendrites. Affects cellular morphogenesis by regulating the expression of target genes that encode cytoskeleton-interacting proteins and not via the direct modification of the cytoskeleton. Maintains the integrity of epidermal hairs and is an essential component of the signaling pathway regulating dendritic branching of sensory neurons.
Drosophila pseudoobscura pseudoobscura (taxid: 46245)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q5R8M1|STK38_PONAB Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1

 Score =  290 bits (741), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/298 (51%), Positives = 191/298 (64%), Gaps = 66/298 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPD
Sbjct: 157 QDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPD 216

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLD++GH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET+++   
Sbjct: 217 NLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRR 276

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 277 QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN 336

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    EVPISE+A++ I+RFC E + R+G A GVEE+KS     FF GVDW+HIRE
Sbjct: 337 WKETLTFPPEVPISEKAKDLILRFCCEWEHRIG-APGVEEIKS---NSFFEGVDWEHIRE 392

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFEA 248
           RPAAI +++KSIDDTSNFD+FP+  +  P+       E  Y  KDWVFINYT+KRFE 
Sbjct: 393 RPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEG 450

Negative regulator of MAP3K1/2 signaling. Converts MAP3K2 from its phosphorylated form to its non-phosphorylated form and inhibits autophosphorylation of MAP3K2.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q15208|STK38_HUMAN Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1

 Score =  290 bits (741), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/298 (51%), Positives = 191/298 (64%), Gaps = 66/298 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPD
Sbjct: 157 QDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPD 216

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLD++GH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET+++   
Sbjct: 217 NLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRR 276

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 277 QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN 336

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    EVPISE+A++ I+RFC E + R+G A GVEE+KS     FF GVDW+HIRE
Sbjct: 337 WKETLTFPPEVPISEKAKDLILRFCCEWEHRIG-APGVEEIKS---NSFFEGVDWEHIRE 392

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFEA 248
           RPAAI +++KSIDDTSNFD+FP+  +  P+       E  Y  KDWVFINYT+KRFE 
Sbjct: 393 RPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEG 450

Negative regulator of MAP3K1/2 signaling. Converts MAP3K2 from its phosphorylated form to its non-phosphorylated form and inhibits autophosphorylation of MAP3K2.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2VDV2|STK38_BOVIN Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1

 Score =  286 bits (733), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 152/298 (51%), Positives = 191/298 (64%), Gaps = 66/298 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPD
Sbjct: 157 QDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPD 216

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLD++GH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET+++   
Sbjct: 217 NLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRR 276

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 277 QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN 336

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    EVPISE+A++ I+RFC E + R+G A GVEE+K+     FF GVDW+HIRE
Sbjct: 337 WKETLTFPPEVPISEKAKDLILRFCCEWEHRIG-APGVEEIKN---NSFFEGVDWEHIRE 392

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFEA 248
           RPAAI +++KSIDDTSNFD+FP+  +  P+       +  Y  KDWVFINYT+KRFE 
Sbjct: 393 RPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPDTDYKNKDWVFINYTYKRFEG 450

Negative regulator of MAP3K1/2 signaling. Converts MAP3K2 from its phosphorylated form to its non-phosphorylated form and inhibits autophosphorylation of MAP3K2.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7TSE6|ST38L_MOUSE Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=2

 Score =  286 bits (732), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 152/298 (51%), Positives = 190/298 (63%), Gaps = 69/298 (23%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D  NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYI+ET LAID+IH+LGFIHRD+KPD
Sbjct: 158 QDKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDVKPD 217

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K   
Sbjct: 218 NLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRR 277

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + FPP               
Sbjct: 278 QLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKVMS 337

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    EVP+SE+A++ I+RFC++ + R+G+  GVEE+K      FF GVDW HIRE
Sbjct: 338 WKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNG-GVEEIK---GHPFFEGVDWGHIRE 393

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFEA 248
           RPAAIP++++SIDDTSNFDDFP+  +     P+P   E  Y  KDWVF+NYT+KRFE 
Sbjct: 394 RPAAIPIEIRSIDDTSNFDDFPESDI---LQPVPNTTEPDYKSKDWVFLNYTYKRFEG 448

Involved in the regulation of structural processes in differentiating and mature neuronal cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3

 Score =  286 bits (731), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 154/298 (51%), Positives = 191/298 (64%), Gaps = 69/298 (23%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D  NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYI+ET LAID+IH+LGFIHRDIKPD
Sbjct: 158 QDKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDIKPD 217

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K   
Sbjct: 218 NLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRR 277

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 278 QLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMN 337

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    EVPISE+A++ I+RFC + + R+G++ GVEE+K      FF GVDW+HIRE
Sbjct: 338 WKETLVFPPEVPISEKAKDLILRFCIDSENRIGNS-GVEEIK---GHPFFEGVDWEHIRE 393

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFEA 248
           RPAAIP+++KSIDDTSNFDDFP+  +     P+P   E  Y  KDWVF+NYT+KRFE 
Sbjct: 394 RPAAIPIEIKSIDDTSNFDDFPESDI---LQPVPNTTEPDYKSKDWVFLNYTYKRFEG 448

Involved in the regulation of structural processes in differentiating and mature neuronal cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q91VJ4|STK38_MOUSE Serine/threonine-protein kinase 38 OS=Mus musculus GN=Stk38 PE=1 SV=1

 Score =  286 bits (731), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 152/298 (51%), Positives = 190/298 (63%), Gaps = 66/298 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPD
Sbjct: 157 QDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPD 216

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLD++GH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET+++   
Sbjct: 217 NLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRR 276

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 277 QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMN 336

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    EVP+SE+A+  I+RFC E + R+G A GVEE+K+     FF GVDW+HIRE
Sbjct: 337 WKETLTFPPEVPVSEKAKGLILRFCCEWEHRIG-APGVEEIKN---NLFFEGVDWEHIRE 392

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFEA 248
           RPAAI +++KSIDDTSNFD+FP+  +  P+       E  Y  KDWVFINYT+KRFE 
Sbjct: 393 RPAAISIEIKSIDDTSNFDEFPESDILKPTVTTSSHPETDYKNKDWVFINYTYKRFEG 450

Negative regulator of MAP3K1/2 signaling. Converts MAP3K2 from its phosphorylated form to its non-phosphorylated form and inhibits autophosphorylation of MAP3K2.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A8XJL7|SAX1_CAEBR Serine/threonine-protein kinase sax-1 OS=Caenorhabditis briggsae GN=sax-1 PE=3 SV=2

 Score =  258 bits (660), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 144/296 (48%), Positives = 176/296 (59%), Gaps = 63/296 (21%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D  NLYL+MEFLPGGDMMTLL+KKDTL+EE TQFY+AE ALAI  IH LGFIHRDIKPD
Sbjct: 155 QDYSNLYLVMEFLPGGDMMTLLIKKDTLTEEATQFYVAEAALAIQFIHNLGFIHRDIKPD 214

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLDARGH+KLSDFGLCTGLKK HRTD YR+     P DF   PF S+   ET+++   
Sbjct: 215 NLLLDARGHVKLSDFGLCTGLKKFHRTDHYRNWPVTLPPDFISKPFESKRKAETWKRNRR 274

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 275 AYAYSTVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPFCSELPQETYRKVIN 334

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    +VPIS EA+ TI RFC E +RRLG+  G++E+K    C FFR +DW+HIRE
Sbjct: 335 WQQTLVFPSDVPISIEAKATIKRFCCEAERRLGNHGGLDEIKQ---CPFFRRIDWNHIRE 391

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEA 248
           RP  I V VKSIDDTSNFDDFPD  L  P++ L +  E   +   F+++T+KRF+ 
Sbjct: 392 RPPPIRVTVKSIDDTSNFDDFPDEDLSWPTSTLIRPEEQPGRRGEFVDFTYKRFDG 447

Acts with sax-2 to restrict the growth of both primary and secondary neurites. Regulates mechanosensory tiling by controlling the termination point of sensory dendrites.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2L6W9|SAX1_CAEEL Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1

 Score =  256 bits (653), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/296 (48%), Positives = 175/296 (59%), Gaps = 63/296 (21%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D  NLYL+MEFLPGGDMMTLL+KKDTL+EE TQFYIAE ALAI  IH LGFIHRDIKPD
Sbjct: 155 QDYSNLYLVMEFLPGGDMMTLLIKKDTLTEEATQFYIAEAALAIQFIHSLGFIHRDIKPD 214

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK--- 129
           NLLLDARGH+KLSDFGLCTGLKK HRTD YR+     P DF   PF S+   ET+++   
Sbjct: 215 NLLLDARGHVKLSDFGLCTGLKKFHRTDHYRNWPSTLPPDFISKPFESKRKAETWKRNRR 274

Query: 130 ---------------------------------VMSWRDTLVFPP--------------- 141
                                            V+ +   + +PP               
Sbjct: 275 AYAYSTVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPFCSELPQETYRKVIN 334

Query: 142 ---------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE 192
                    +VPIS EA+ TI RFC E +RRLG+  G++E+K    C F + +DW+HIRE
Sbjct: 335 WQQTLVFPSDVPISIEAKATIKRFCCEAERRLGNHGGLDEIKQ---CPFVKRIDWNHIRE 391

Query: 193 RPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEA 248
           RP  I V VKSIDDTSNFDDFPD  L  P++ L +  E   +   F+++T+KRF+ 
Sbjct: 392 RPPPIRVTVKSIDDTSNFDDFPDEDLTWPTSTLIRPEEQPGRRGEFVDFTYKRFDG 447

Acts with sax-2 to restrict the growth of both primary and secondary neurites. Regulates mechanosensory tiling by controlling the termination point of sensory dendrites.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9NBK5|TRC_DROME Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1

 Score =  229 bits (583), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 104/138 (75%), Positives = 122/138 (88%), Gaps = 4/138 (2%)

Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEE 172
             YPPFCS+NPQ+TYRKVM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+E+
Sbjct: 328 MGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLED 387

Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEII 232
           LKS+    FFRGVDW+HIRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI 
Sbjct: 388 LKSV---PFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA 444

Query: 233 YKDWVFINYTFKRFEANS 250
            KDWVFINYT+KRFE  +
Sbjct: 445 -KDWVFINYTYKRFEVRN 461

Has an important role, with fry, in controlling cell structure and proliferation of a variety of polarized outgrowths including epidermal hairs, bristles, arista laterals, and dendrites. Affects cellular morphogenesis by regulating the expression of target genes that encode cytoskeleton-interacting proteins and not via the direct modification of the cytoskeleton. Maintains the integrity of epidermal hairs and is an essential component of the signaling pathway regulating dendritic branching of sensory neurons.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
91079911	459	PREDICTED: similar to serine/threonine-p	0.663	0.507	0.677	1e-108
194751951	457	GF10844 [Drosophila ananassae] gi|190625	0.666	0.512	0.661	1e-106
195354274	458	GM16004 [Drosophila sechellia] gi|194127	0.666	0.510	0.657	1e-106
24667016	459	tricornered, isoform A [Drosophila melan	0.666	0.509	0.657	1e-106
195496122	458	GE22460 [Drosophila yakuba] gi|194181660	0.666	0.510	0.657	1e-106
195427553	460	GK17215 [Drosophila willistoni] gi|19415	0.666	0.508	0.654	1e-105
195173147	457	GL15676 [Drosophila persimilis] gi|19846	0.666	0.512	0.654	1e-105
122000646	458	RecName: Full=Serine/threonine-protein k	0.666	0.510	0.654	1e-105
195379452	457	GJ14000 [Drosophila virilis] gi|19415565	0.666	0.512	0.654	1e-105
157124880	458	serine/threonine-protein kinase 38 (ndr2	0.658	0.504	0.648	1e-103

>gi|91079911|ref|XP_966801.1| PREDICTED: similar to serine/threonine-protein kinase 38 (ndr2 protein kinase) [Tribolium castaneum] gi|270003267|gb|EEZ99714.1| hypothetical protein TcasGA2_TC002475 [Tribolium castaneum]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/298 (67%), Positives = 220/298 (73%), Gaps = 65/298 (21%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            DPINLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYIAETALAIDSIHKLGFIHRDIKPD
Sbjct: 155 QDPINLYLIMEFLPGGDMMTLLMKKDTLSEEFTQFYIAETALAIDSIHKLGFIHRDIKPD 214

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDA+GH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 215 NLLLDAKGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIITSSPMDSKRRAESWKKN 274

Query: 114 -----------------------SYPPFC--------------------SENPQETYRKV 130
                                   Y P C                    SENPQ+TYRKV
Sbjct: 275 RRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLIGYPPFCSENPQDTYRKV 334

Query: 131 MSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI 190
           M+WR+TLVFP EVPISEEA++TI++FC E +RRLGS +G+E+LK +    FFRGVDW+HI
Sbjct: 335 MNWRETLVFPAEVPISEEAKDTIIKFCCEAERRLGSQKGIEDLKII---PFFRGVDWEHI 391

Query: 191 RERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEA 248
           RERPAAIPV+VKSIDDTSNFDDFPDVKLEIPSAP+PQDGE+ YKDWVFINYTFKRFE 
Sbjct: 392 RERPAAIPVEVKSIDDTSNFDDFPDVKLEIPSAPMPQDGEVNYKDWVFINYTFKRFEG 449

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194751951|ref|XP_001958287.1| GF10844 [Drosophila ananassae] gi|190625569|gb|EDV41093.1| GF10844 [Drosophila ananassae]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/301 (66%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 159 QDQVNLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYISETALAIDSIHKLGFIHRDIKPD 218

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 219 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 278

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 279 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 338

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETIV FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 339 VMNWRETLIFPPEIPISEEAKETIVNFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 395

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 396 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 454

Query: 250 S 250
           +
Sbjct: 455 N 455

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195354274|ref|XP_002043623.1| GM16004 [Drosophila sechellia] gi|194127791|gb|EDW49834.1| GM16004 [Drosophila sechellia]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            DP+NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 160 QDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 219

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 220 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 279

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 280 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 339

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 340 VMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 396

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 397 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 455

Query: 250 S 250
           +
Sbjct: 456 N 456

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24667016|ref|NP_524170.2| tricornered, isoform A [Drosophila melanogaster] gi|194874400|ref|XP_001973393.1| GG13366 [Drosophila erecta] gi|195591639|ref|XP_002085546.1| GD12245 [Drosophila simulans] gi|7293735|gb|AAF49104.1| tricornered, isoform A [Drosophila melanogaster] gi|15292071|gb|AAK93304.1| LD37189p [Drosophila melanogaster] gi|190655176|gb|EDV52419.1| GG13366 [Drosophila erecta] gi|194197555|gb|EDX11131.1| GD12245 [Drosophila simulans] gi|220946226|gb|ACL85656.1| trc-PA [synthetic construct]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            DP+NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 161 QDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 220

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 221 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 280

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 281 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 340

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 341 VMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 397

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 398 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 456

Query: 250 S 250
           +
Sbjct: 457 N 457

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195496122|ref|XP_002095559.1| GE22460 [Drosophila yakuba] gi|194181660|gb|EDW95271.1| GE22460 [Drosophila yakuba]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            DP+NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 160 QDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 219

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 220 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 279

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 280 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 339

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 340 VMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 396

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 397 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 455

Query: 250 S 250
           +
Sbjct: 456 N 456

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195427553|ref|XP_002061841.1| GK17215 [Drosophila willistoni] gi|194157926|gb|EDW72827.1| GK17215 [Drosophila willistoni]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 162 QDQVNLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYISETALAIDSIHKLGFIHRDIKPD 221

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 222 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 281

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 282 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 341

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+++LKS+    FFRGVDW+H
Sbjct: 342 VMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLDDLKSV---PFFRGVDWEH 398

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 399 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 457

Query: 250 S 250
           +
Sbjct: 458 N 458

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195173147|ref|XP_002027355.1| GL15676 [Drosophila persimilis] gi|198465437|ref|XP_001353626.2| GA21227 [Drosophila pseudoobscura pseudoobscura] gi|194113198|gb|EDW35241.1| GL15676 [Drosophila persimilis] gi|198150159|gb|EAL31140.2| GA21227 [Drosophila pseudoobscura pseudoobscura]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 159 QDQVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 218

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 219 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 278

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 279 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 338

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI++FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 339 VMNWRETLIFPPEIPISEEAKETIIKFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 395

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 396 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 454

Query: 250 S 250
           +
Sbjct: 455 N 455

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|122000646|sp|Q2LZZ7.1|TRC_DROPS RecName: Full=Serine/threonine-protein kinase tricorner; AltName: Full=NDR protein kinase; AltName: Full=Serine/threonine-protein kinase 38-like

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/301 (65%), Positives = 219/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 160 QDQVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 219

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 220 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 279

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 280 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 339

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI++FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 340 VMNWRETLIFPPEIPISEEAKETIIKFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 396

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 397 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-KDWVFINYTYKRFEVR 455

Query: 250 S 250
           +
Sbjct: 456 N 456

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195379452|ref|XP_002048493.1| GJ14000 [Drosophila virilis] gi|194155651|gb|EDW70835.1| GJ14000 [Drosophila virilis]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/301 (65%), Positives = 218/301 (72%), Gaps = 67/301 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ETALAIDSIHKLGFIHRDIKPD
Sbjct: 159 QDQVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPD 218

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 219 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 278

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 279 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 338

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+E+LKS+    FFRGVDW+H
Sbjct: 339 VMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSV---PFFRGVDWEH 395

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEAN 249
           IRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  KDWVFINYT+KRFE  
Sbjct: 396 IRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPVPQGGEIA-KDWVFINYTYKRFEVR 454

Query: 250 S 250
           +
Sbjct: 455 N 455

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124880|ref|XP_001660568.1| serine/threonine-protein kinase 38 (ndr2 protein kinase) [Aedes aegypti] gi|108873808|gb|EAT38033.1| AAEL010021-PA [Aedes aegypti]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/299 (64%), Positives = 217/299 (72%), Gaps = 68/299 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D +NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH+LGFIHRDIKPD
Sbjct: 155 QDSVNLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHRLGFIHRDIKPD 214

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF------------------- 113
           NLLLDARGH+KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF                   
Sbjct: 215 NLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASPMDSKRRAESWKR 274

Query: 114 ------------------------SYPPFC--------------------SENPQETYRK 129
                                    Y P C                    S+NPQ+TYRK
Sbjct: 275 NRRALAYSTVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRK 334

Query: 130 VMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH 189
           VM+WR+TL+FPPE PISEEAR+TIV+FC E +RRLGS RG+E+LK +    FFRGVDW+H
Sbjct: 335 VMNWRETLIFPPETPISEEARDTIVKFCCEAERRLGSQRGIEDLKLVS---FFRGVDWEH 391

Query: 190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEA 248
           IRERPAAIPV+V+SIDDTSNFDDFPDV LEIP+ P P+ GE++ KDWVFINYTF+RFE+
Sbjct: 392 IRERPAAIPVEVRSIDDTSNFDDFPDVALEIPAHPTPE-GEVL-KDWVFINYTFRRFES 448

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
FB|FBgn0003744	463	trc "tricornered" [Drosophila	0.376	0.285	0.764	1.7e-109
UNIPROTKB|Q2LZZ7	458	trc "Serine/threonine-protein	0.376	0.288	0.764	4.4e-109
ZFIN|ZDB-GENE-040426-2811	468	stk38a "serine/threonine kinas	0.330	0.247	0.758	1.3e-92
UNIPROTKB|E1C2E2	466	STK38L "Uncharacterized protei	0.330	0.248	0.767	2.1e-92
UNIPROTKB|E2RA10	465	STK38 "Uncharacterized protein	0.330	0.249	0.75	1.9e-91
UNIPROTKB|A7MB32	464	STK38L "STK38L protein" [Bos t	0.330	0.25	0.758	2.4e-91
UNIPROTKB|E2R001	464	STK38L "Uncharacterized protei	0.330	0.25	0.758	2.4e-91
UNIPROTKB|E1C2E1	470	STK38L "Uncharacterized protei	0.330	0.246	0.767	3e-91
UNIPROTKB|B4E3J8	371	STK38L "cDNA FLJ50384, highly	0.330	0.312	0.758	3e-91
UNIPROTKB|Q9Y2H1	464	STK38L "Serine/threonine-prote	0.330	0.25	0.758	3e-91

FB|FBgn0003744 trc "tricornered" [Drosophila melanogaster (taxid:7227)]

 Score = 582 (209.9 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
 Identities = 104/136 (76%), Positives = 122/136 (89%)

Query:   115 YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELK 174
             YPPFCS+NPQ+TYRKVM+WR+TL+FPPE+PISEEA+ETI+ FC E DRRLGS RG+E+LK
Sbjct:   330 YPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLK 389

Query:   175 SLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYK 234
             S+    FFRGVDW+HIRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  K
Sbjct:   390 SV---PFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-K 445

Query:   235 DWVFINYTFKRFEANS 250
             DWVFINYT+KRFE  +
Sbjct:   446 DWVFINYTYKRFEVRN 461

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;NAS

GO:0005634 "nucleus" evidence=ISS;IDA;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0035317 "imaginal disc-derived wing hair organization" evidence=IMP

GO:0048800 "antennal morphogenesis" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005938 "cell cortex" evidence=IDA

GO:0022416 "chaeta development" evidence=IMP

GO:0007165 "signal transduction" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0070593 "dendrite self-avoidance" evidence=IGI

UNIPROTKB|Q2LZZ7 trc "Serine/threonine-protein kinase tricorner" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 584 (210.6 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
 Identities = 104/136 (76%), Positives = 123/136 (90%)

Query:   115 YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELK 174
             YPPFCS+NPQ+TYRKVM+WR+TL+FPPE+PISEEA+ETI++FC E DRRLGS RG+E+LK
Sbjct:   325 YPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIIKFCCEADRRLGSQRGLEDLK 384

Query:   175 SLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYK 234
             S+    FFRGVDW+HIRERPAAIPV+V+SIDDTSNFD+FPDV LEIPSAP+PQ GEI  K
Sbjct:   385 SV---PFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIPSAPIPQGGEIA-K 440

Query:   235 DWVFINYTFKRFEANS 250
             DWVFINYT+KRFE  +
Sbjct:   441 DWVFINYTYKRFEVRN 456

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0050773 "regulation of dendrite development" evidence=ISS

ZFIN|ZDB-GENE-040426-2811 stk38a "serine/threonine kinase 38a" [Danio rerio (taxid:7955)]

 Score = 477 (173.0 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
 Identities = 88/116 (75%), Positives = 104/116 (89%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPDN
Sbjct:   158 DKMNLYLIMEFLPGGDMMTLLMKKDTLTEEATQFYIAETVLAIDSIHQLGFIHRDIKPDN 217

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLD+RGH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET+++
Sbjct:   218 LLLDSRGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKR 273

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|E1C2E2 STK38L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 470 (170.5 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
 Identities = 89/116 (76%), Positives = 102/116 (87%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D  NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ET LAID+IH+LGFIHRDIKPDN
Sbjct:   159 DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEETQFYISETVLAIDAIHQLGFIHRDIKPDN 218

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K
Sbjct:   219 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK 274

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2RA10 STK38 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 471 (170.9 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
 Identities = 87/116 (75%), Positives = 104/116 (89%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPDN
Sbjct:   158 DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDN 217

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLD++GH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET+++
Sbjct:   218 LLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKR 273

GO:0070688 "MLL5-L complex" evidence=IEA

GO:0043407 "negative regulation of MAP kinase activity" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|A7MB32 STK38L "STK38L protein" [Bos taurus (taxid:9913)]

 Score = 467 (169.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
 Identities = 88/116 (75%), Positives = 102/116 (87%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D  NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYI+ET LAID+IH+LGFIHRDIKPDN
Sbjct:   159 DKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDIKPDN 218

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K
Sbjct:   219 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK 274

GO:0051128 "regulation of cellular component organization" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R001 STK38L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 467 (169.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
 Identities = 88/116 (75%), Positives = 102/116 (87%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D  NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYI+ET LAID+IH+LGFIHRDIKPDN
Sbjct:   159 DKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDIKPDN 218

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K
Sbjct:   219 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK 274

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0051128 "regulation of cellular component organization" evidence=IEA

UNIPROTKB|E1C2E1 STK38L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 470 (170.5 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 89/116 (76%), Positives = 102/116 (87%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D  NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYI+ET LAID+IH+LGFIHRDIKPDN
Sbjct:   159 DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEETQFYISETVLAIDAIHQLGFIHRDIKPDN 218

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K
Sbjct:   219 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK 274

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|B4E3J8 STK38L "cDNA FLJ50384, highly similar to Serine/threonine-protein kinase 38-like (EC 2.7.11.1)" [Homo sapiens (taxid:9606)]

 Score = 467 (169.5 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 88/116 (75%), Positives = 102/116 (87%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D  NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYI+ET LAID+IH+LGFIHRDIKPDN
Sbjct:    66 DKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDIKPDN 125

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K
Sbjct:   126 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK 181

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|Q9Y2H1 STK38L "Serine/threonine-protein kinase 38-like" [Homo sapiens (taxid:9606)]

 Score = 467 (169.5 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 88/116 (75%), Positives = 102/116 (87%)

Query:    14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
             D  NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYI+ET LAID+IH+LGFIHRDIKPDN
Sbjct:   159 DKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDIKPDN 218

Query:    74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK 129
             LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K
Sbjct:   219 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK 274

GO:0003779 "actin binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0015629 "actin cytoskeleton" evidence=ISS

GO:0051128 "regulation of cellular component organization" evidence=ISS

GO:0005524 "ATP binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7TSE6	ST38L_MOUSE	2, ., 7, ., 1, 1, ., 1	0.5100	0.6524	0.4935	yes	N/A
Q5R8M1	STK38_PONAB	2, ., 7, ., 1, 1, ., 1	0.5167	0.6609	0.4989	yes	N/A
Q2LZZ7	TRC_DROPS	2, ., 7, ., 1, 1, ., 1	0.6544	0.6666	0.5109	yes	N/A
Q15208	STK38_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5167	0.6609	0.4989	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	351
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-112
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-99
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-95
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-50
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-50
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-50
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-47
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-47
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-43
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-43
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-43
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	7e-41
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-40
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-40
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-40
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-39
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	8e-38
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	9e-37
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-36
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	6e-36
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-35
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-35
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-34
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-34
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	8e-33
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	8e-33
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-32
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-31
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-30
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-29
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-28
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-28
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-27
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-27
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-27
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-27
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	9e-27
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-26
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-26
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-25
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	8e-25
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-24
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-24
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-24
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-24
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-23
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-22
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-22
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	6e-22
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	9e-22
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-21
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-21
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	4e-21
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	8e-21
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-20
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-20
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-19
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-19
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	5e-19
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-18
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-18
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-18
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-18
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	7e-18
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-17
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-16
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-16
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-16
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-16
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	6e-16
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	7e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	9e-16
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-15
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-15
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-15
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-15
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-15
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-14
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-14
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-14
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-14
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	4e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-14
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	4e-14
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	6e-14
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	7e-14
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-14
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	9e-14
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-13
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-13
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	4e-13
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-13
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-12
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-12
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-12
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-12
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-12
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-12
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	9e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	9e-12
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-11
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-11
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-11
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-11
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-11
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-11
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-11
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-11
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-11
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	5e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-11
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	9e-11
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-10
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-10
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-10
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-10
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-10
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-10
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-10
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-10
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-10
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-10
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-10
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-10
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	7e-10
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	8e-10
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-10
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	9e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-09
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-09
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-09
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-09
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-09
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-09
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-09
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-09
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-09
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-09
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-09
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-09
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-09
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	5e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-09
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	6e-09
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	6e-09
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	6e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	7e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	7e-09
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	7e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	8e-09
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	9e-09
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	9e-09
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-09
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	9e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-08
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-08
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-08
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-08
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-08
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-08
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-08
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-08
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-08
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-08
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	5e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-08
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-08
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	8e-08
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-07
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-07
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-07
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-07
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	3e-07
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-07
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-07
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-07
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-07
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	6e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	6e-07
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	6e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	6e-07
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	8e-07
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	8e-07
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	9e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	9e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-06
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-06
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-06
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-06
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	3e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-06
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-06
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	5e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-06
pfam00433	47	pfam00433, Pkinase_C, Protein kinase C terminal do	6e-06
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	7e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	8e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-06
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	9e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	9e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	9e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	1e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-05
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-05
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-05
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	4e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-05
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	4e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	5e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-05
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	6e-05
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	7e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	7e-05
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	7e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-05
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	8e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	9e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	9e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	4e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	6e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	6e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	6e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	6e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	8e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	8e-04
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	8e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	9e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.001
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.001
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.001
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	0.001
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.001
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.001
smart00133	64	smart00133, S_TK_X, Extension to Ser/Thr-type prot	0.001
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.002
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.002
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.002
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.002
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.002
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.002
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.002
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	0.002
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.002
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.003
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.003
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.003
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.003
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.003
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.003
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.003
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.003
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.003
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.004
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	0.004
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	0.004
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	0.004
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.004
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	0.004
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.004
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.004
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.004

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  331 bits (851), Expect = e-112
 Identities = 154/313 (49%), Positives = 183/313 (58%), Gaps = 75/313 (23%)

Query: 3   DYACLKQLRMS--DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH 60
           D   + +L  S  D   LYLIME+LPGGDMMTLLMKKDT +EE T+FYIAET LAIDSIH
Sbjct: 59  DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIH 118

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCS 120
           KLG+IHRDIKPDNLLLDA+GHIKLSDFGLCTGLKKSHRT+FYR LS A PS+F       
Sbjct: 119 KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFIS-- 176

Query: 121 ENPQETYRKVMSW---RDTLVF---------PPEV------------------------- 143
             P  + RK  +W   R  L +          PEV                         
Sbjct: 177 -KPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Query: 144 -P--ISEEARET--------------------------IVRFCSECDRRLGSARGVEELK 174
            P   S+  +ET                          I R C E +RRLG+  GV E+K
Sbjct: 236 YPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGN-NGVNEIK 294

Query: 175 SLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYK 234
           S     FF+GVDW+HIRERPA I  ++KSI DTSNFDDF ++ L++P++P P  G+I  K
Sbjct: 295 S---HPFFKGVDWEHIRERPAPIIPELKSITDTSNFDDFEEIDLDVPTSPGPPRGKIKSK 351

Query: 235 DWVFINYTFKRFE 247
           D  FI YT+KRFE
Sbjct: 352 DLAFIGYTYKRFE 364

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score =  298 bits (765), Expect = 1e-99
 Identities = 158/296 (53%), Positives = 190/296 (64%), Gaps = 66/296 (22%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D +NLYLIMEFLPGGDMMTLLMKKDTL+EE TQFYIAET LAIDSIH+LGFIHRDIKPDN
Sbjct: 72  DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQET------- 126
           LLLD++GH+KLSDFGLCTGLKK+HRT+FYR+L+ + PSDF++    S+   ET       
Sbjct: 132 LLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQ 191

Query: 127 ---------------------YRKVMSWRDTLV--------FPP---------------- 141
                                Y K+  W    V        +PP                
Sbjct: 192 LAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNW 251

Query: 142 --------EVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER 193
                   EVPISE+A++ I+RFC E + R+G A GVEE+K+     FF GVDW+HIRER
Sbjct: 252 KETLIFPPEVPISEKAKDLILRFCCEWEHRIG-APGVEEIKT---NPFFEGVDWEHIRER 307

Query: 194 PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIY--KDWVFINYTFKRFE 247
           PAAIP+++KSIDDTSNFD+FPD  +  P+       E  Y  KDWVFINYT+KRFE
Sbjct: 308 PAAIPIEIKSIDDTSNFDEFPDSDILKPTVATSNHPETDYKNKDWVFINYTYKRFE 363

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  287 bits (735), Expect = 3e-95
 Identities = 154/294 (52%), Positives = 189/294 (64%), Gaps = 65/294 (22%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLYLIMEFLPGGDMMTLLMKKDTLSEE TQFYIAET LAID+IH+LGFIHRDIKPDN
Sbjct: 72  DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRK---- 129
           LLLDA+GH+KLSDFGLCTGLKK+HRT+FYR+L+   PSDFS+    S+   ET++K    
Sbjct: 132 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQ 191

Query: 130 --------------------------------VMSWRDTLVFPP---EVP---------- 144
                                           V+ +   + +PP   E P          
Sbjct: 192 LAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNW 251

Query: 145 -----------ISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER 193
                      ISE+A++ I+RFC++ + R+GS  GVEE+KS     FF GVDW HIRER
Sbjct: 252 KETLVFPPEVPISEKAKDLILRFCTDSENRIGSN-GVEEIKSH---PFFEGVDWGHIRER 307

Query: 194 PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFE 247
           PAAIP+++KSIDDTSNFD+FP+  +  P A    + +   KDWVF+NYT+KRFE
Sbjct: 308 PAAIPIEIKSIDDTSNFDEFPESDILQP-AENTIEPDYKSKDWVFLNYTYKRFE 360

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  171 bits (436), Expect = 2e-50
 Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 37/246 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +GFIHRD+KPDN
Sbjct: 114 DDKYLYMVMEYMPGGDLVNLMSNYD-IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 172

Query: 74  LLLDARGHIKLSDFGLC-----TGLK-----------------KSHRTDFY--RDLSQAK 109
           +LLD  GH+KL+DFG C      G+                  KS   D Y  R+     
Sbjct: 173 MLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 232

Query: 110 PSDFSY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRR 163
              F Y       PF +++   TY K+M  +++L FP ++ IS++A++ I  F ++ + R
Sbjct: 233 VGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVR 292

Query: 164 LGSARGVEELKSLGACQFFRGVDW--DHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIP 221
           LG   GV+E+KS     FF+   W  D+IRE  A +  ++ S  DTSNFDD  D      
Sbjct: 293 LGR-NGVDEIKSH---PFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDIEDDDKNEE 348

Query: 222 SAPLPQ 227
           + PLP+
Sbjct: 349 TFPLPK 354

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  169 bits (431), Expect = 5e-50
 Identities = 86/229 (37%), Positives = 131/229 (57%), Gaps = 34/229 (14%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LYL ME++PGGD  TLL     LSE+  +FY+AE   A+D++H+LG+IHRD+KP+N
Sbjct: 72  DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPEN 131

Query: 74  LLLDARGHIKLSDFGLCTG-LKKSHR---TDFYR--DLSQAKPSDFS------------- 114
            L+DA GHIKL+DFGL  G +  ++    +  Y   ++ + K  DF+             
Sbjct: 132 FLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEF 191

Query: 115 ---YPPFCSENPQETYRKVMSWRDTLVFP----PEVPISEEARETIVRFCSECDRRLGSA 167
              +PPF    P ET+  +  W++TL  P    P   +S+EA + I +  ++  RR GS 
Sbjct: 192 LCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS- 250

Query: 168 RGVEELKSLGACQFFRGVDWDHIRE-RPAAIPVQVKSIDDTSNFDDFPD 215
             +E++K      FF+ VDW+ +RE +P  +P +++S  DT  FDDF +
Sbjct: 251 --LEDIK---NHPFFKEVDWNELRELKPPFVP-ELESEIDTGYFDDFEN 293

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score =  169 bits (430), Expect = 7e-50
 Identities = 95/263 (36%), Positives = 134/263 (50%), Gaps = 37/263 (14%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D  NLYL+M++  GGD++TLL K +D L E+  +FY+AE  LAIDS+H+LG++HRDIKPD
Sbjct: 72  DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPD 131

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTD--------------FYRDLSQAKPSD------ 112
           N+LLD  GHI+L+DFG C  L                       + +   K         
Sbjct: 132 NVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDW 191

Query: 113 -----------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFCSEC 160
                      +   PF +E+  ETY K+M+ ++   FPP+V  +SEEA++ I R     
Sbjct: 192 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSP 251

Query: 161 DRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEI 220
           + RLG   G+++ K      FF G+DWD+IR   A    +V S  DTSNFD   D     
Sbjct: 252 ETRLGRN-GLQDFKDH---PFFEGIDWDNIRNSTAPYVPEVSSPTDTSNFDVDDDDLRNT 307

Query: 221 PSAPLPQDGEIIYKDWVFINYTF 243
            S P    G        F+ +T+
Sbjct: 308 ESLPPSSHGAFSGNHLPFVGFTY 330

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  161 bits (409), Expect = 3e-47
 Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 37/228 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLYL+ME++PGG++ + L K     E   +FY A+  LA++ +H L  ++RD+KP+N
Sbjct: 72  DDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPEN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF-------- 113
           LLLD+ G+IK++DFG    +K   RT            +        K  D+        
Sbjct: 132 LLLDSDGYIKITDFGFAKRVKG--RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIY 189

Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS-A 167
                YPPF  +NP + Y K++  +  + FP     S +A++ I      +  +RLG+  
Sbjct: 190 EMLAGYPPFFDDNPIQIYEKILEGK--VRFPS--FFSPDAKDLIRNLLQVDLTKRLGNLK 245

Query: 168 RGVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDDF 213
            GV ++K+     +F G+DW  + +R   A    +VK   DTSNFDD+
Sbjct: 246 NGVNDIKN---HPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY 290

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  162 bits (412), Expect = 4e-47
 Identities = 55/91 (60%), Positives = 73/91 (80%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +LYL+ME++PGGD+M LL++KD   EE  +FYIAE  LA+DS+HKLGFIHRDIKPDN+L+
Sbjct: 75  HLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI 134

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
           DA GHIKL+DFGLC  + K+   ++Y + S 
Sbjct: 135 DADGHIKLADFGLCKKMNKAKDREYYLNDSH 165

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  150 bits (382), Expect = 1e-43
 Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 35/190 (18%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               LYL++E+ PGG++ + L K+   SEE  +FY AE  LA++ +H LG I+RD+KP+N
Sbjct: 64  TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPEN 123

Query: 74  LLLDARGHIKLSDFGLC-TGLKKSHRTD------FYRDLS----QAKPSDFS-------- 114
           +LLDA GHIKL+DFGL      +  RT+       Y  L+      K    +        
Sbjct: 124 ILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY--LAPEVLLGKGYGKAVDWWSLGV 181

Query: 115 --------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLG 165
                    PPF +E+ +E Y K++  +D L FP    +S EAR+ I     +   +RLG
Sbjct: 182 LLYEMLTGKPPFYAEDRKEIYEKIL--KDPLRFPE--FLSPEARDLISGLLQKDPTKRLG 237

Query: 166 SARGVEELKS 175
           S  G EE+K+
Sbjct: 238 SG-GAEEIKA 246

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  153 bits (389), Expect = 2e-43
 Identities = 63/96 (65%), Positives = 77/96 (80%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LYLIMEFLPGGD+MT+L+K DT SE+ T+FY+AE  LAI+++HKLGFIHRDIKPDN
Sbjct: 72  DAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +L+D  GHIKLSDFGL TG  K H + +Y+ L Q K
Sbjct: 132 ILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGK 167

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score =  152 bits (386), Expect = 2e-43
 Identities = 82/274 (29%), Positives = 123/274 (44%), Gaps = 50/274 (18%)

Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHR 67
           Q    D  NLYL+ME+ PGGD+++LL + +D   E+  QFY+AE  LAI S+H++G++HR
Sbjct: 67  QYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHR 126

Query: 68  DIKPDNLLLDARGHIKLSDFG------------------------------LCTGLKKSH 97
           DIKP+N+L+D  GHIKL+DFG                              +    K ++
Sbjct: 127 DIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTY 186

Query: 98  --RTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
               D++     A    +   PF      +TY  +M+++  L FP +  +S +  + I  
Sbjct: 187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQS 246

Query: 156 FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDF-- 213
                  RLG          L    FF  +DW++IR         +KS DDTSNFD+   
Sbjct: 247 LLCGQKERLGYEG-------LCCHPFFSKIDWNNIRNSLPPFVPTLKSDDDTSNFDEPEK 299

Query: 214 ----PDVKLEIPSAPLPQDGEIIYKDWVFINYTF 243
                         P    G    KD  F+ ++F
Sbjct: 300 NSTRRSQSSTTQLKPNGFSG----KDLPFVGFSF 329

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score =  145 bits (368), Expect = 7e-41
 Identities = 92/239 (38%), Positives = 125/239 (52%), Gaps = 43/239 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   LYL+M++  GGD++TLL K +D L E+  +FYIAE  LAI SIH+L ++HRDIKPD
Sbjct: 72  DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPD 131

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP---------------- 116
           N+LLD  GHI+L+DFG C  LK +        ++   P D+  P                
Sbjct: 132 NVLLDMNGHIRLADFGSC--LKMNQDGTVQSSVAVGTP-DYISPEILQAMEDGMGKYGPE 188

Query: 117 ------------------PFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFC 157
                             PF +E+  ETY K+M+  +   FP  +  +SEEA++ I R  
Sbjct: 189 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLI 248

Query: 158 SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDV 216
              +RRLG   G+E+ K      FF G+DW++IR   A     V S  DTSNFD   DV
Sbjct: 249 CSRERRLGQ-NGIEDFK---KHAFFEGIDWENIRNLEAPYIPDVSSPSDTSNFDVDDDV 303

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  145 bits (368), Expect = 2e-40
 Identities = 53/109 (48%), Positives = 74/109 (67%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLY +M+++PGGDMM+LL++     E+  +FYIAE   AI+S+HK+GFIHRDIKPDN
Sbjct: 72  DKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSEN 122
           +L+D  GHIKL+DFGLCTG + +H + +Y+     +          SE 
Sbjct: 132 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI 180

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score =  145 bits (366), Expect = 3e-40
 Identities = 95/264 (35%), Positives = 144/264 (54%), Gaps = 39/264 (14%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +G IHRD+KPDN
Sbjct: 114 DDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN 172

Query: 74  LLLDARGHIKLSDFGLC-----TGLK-----------------KSHRTDFY--RDLSQAK 109
           +LLD  GH+KL+DFG C     TG+                  KS   D Y  R+     
Sbjct: 173 MLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 232

Query: 110 PSDFSY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRR 163
              F +       PF +++   TY K+M  +++L FP +V IS+ A+  I  F ++ + R
Sbjct: 233 VGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVR 292

Query: 164 LGSARGVEELKSLGACQFFRG--VDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIP 221
           LG   GVEE+K      FF+    +WD+IRE  A +  ++ S  D+SNFDD  D K ++ 
Sbjct: 293 LGR-NGVEEIKQH---PFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVE 348

Query: 222 SAPLPQDGEIIYKDWVFINYTFKR 245
           + P+P+    +     FI +T+ R
Sbjct: 349 TFPIPK--AFVGNQLPFIGFTYYR 370

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  142 bits (360), Expect = 3e-40
 Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 40/205 (19%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           NLYL+ME+LPGGD+ +LL    +L E+  + YIAE  LA++ +H  G IHRD+KPDN+L+
Sbjct: 67  NLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI 126

Query: 77  DARGHIKLSDFGLC-TGLKKSHRTDFYRD------------------LSQA--KPSDF-- 113
           D+ GH+KL+DFGL   GL +        +                  L Q   K  D+  
Sbjct: 127 DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWS 186

Query: 114 ----------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDR 162
                       PPF  E P+E ++ +++ +  + +P +V +S+EA + I +    + ++
Sbjct: 187 LGCILYEFLVGIPPFHGETPEEIFQNILNGK--IEWPEDVEVSDEAIDLISKLLVPDPEK 244

Query: 163 RLGSARGVEELKSLGACQFFRGVDW 187
           RLG A+ +EE+K+     FF+G+DW
Sbjct: 245 RLG-AKSIEEIKNH---PFFKGIDW 265

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score =  141 bits (357), Expect = 2e-39
 Identities = 93/266 (34%), Positives = 135/266 (50%), Gaps = 43/266 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D  NLYL+M++  GGD++TLL K +D L E+  +FY+AE  +AIDS+H+L ++HRDIKPD
Sbjct: 72  DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPD 131

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP---------------- 116
           N+L+D  GHI+L+DFG C  LK          ++   P D+  P                
Sbjct: 132 NILMDMNGHIRLADFGSC--LKLMEDGTVQSSVAVGTP-DYISPEILQAMEDGKGKYGPE 188

Query: 117 ------------------PFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFC 157
                             PF +E+  ETY K+M+ ++   FP +V  +SE+A++ I R  
Sbjct: 189 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLI 248

Query: 158 SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVK 217
              + RLG   G+E+ K      FF G+DWD+IR   A    +V S  DTSNFD   D  
Sbjct: 249 CSREHRLGQ-NGIEDFKQH---PFFTGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCL 304

Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTF 243
               + P P           F+ +T+
Sbjct: 305 KNSETMPPPSHTAFSGHHLPFVGFTY 330

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score =  138 bits (349), Expect = 8e-38
 Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 37/242 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 118 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 176

Query: 78  ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
             GH+KL+DFG C  +                       KS   D Y  R+        F
Sbjct: 177 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236

Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
            Y       PF +++   TY K+M+ +++L FP +  IS+EA+  I  F ++ + RLG  
Sbjct: 237 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 295

Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
            GVEE+K      FF+     W+ +R+  A +   + S  DTSNFDD  + K E  + P+
Sbjct: 296 NGVEEIKRH---LFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDIEEDKGEEETFPI 352

Query: 226 PQ 227
           P+
Sbjct: 353 PK 354

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  135 bits (342), Expect = 9e-37
 Identities = 50/69 (72%), Positives = 55/69 (79%)

Query: 249 NSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSL 308
             P  F    + PM SKR+AE+WK+NRRALAYSTVGTPDYIAPEVFLQTGY    DWWSL
Sbjct: 166 ALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL 225

Query: 309 GVIMYEMLI 317
           GVIMYEML+
Sbjct: 226 GVIMYEMLV 234

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  132 bits (334), Expect = 1e-36
 Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 25/179 (13%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LYL+ME+  GGD+  LL K+  LSE+  +FY+ +   A++ +H  G +HRD+KP+N
Sbjct: 68  DEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPEN 127

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTD------FYR------DLSQAKPSD--------- 112
           +LLD  GH+KL+DFGL   L    +         Y            K  D         
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187

Query: 113 ---FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA 167
                 PPF  ++      K +        PPE  IS EA++ I +    + ++RL + 
Sbjct: 188 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAE 246

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  133 bits (336), Expect = 6e-36
 Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 6/132 (4%)

Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEE 172
           + +PPF S+  QETY K+++W+++L FPP+ P+S EA + I R   + + RLGS    EE
Sbjct: 225 YGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRLGSF---EE 281

Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEII 232
           +KS     FF+G+DW+++RE       ++ S  DTSNFDDF D K               
Sbjct: 282 IKSH---PFFKGIDWENLRETKPPFVPELSSPLDTSNFDDFEDDKDLSDYLSQNSKKLNK 338

Query: 233 YKDWVFINYTFK 244
            K   F+ +T+K
Sbjct: 339 GKQLAFVGFTYK 350

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  130 bits (328), Expect = 1e-35
 Identities = 77/196 (39%), Positives = 106/196 (54%), Gaps = 30/196 (15%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            LYL+ME+L GGD  +L+     L E+  + YIAE  L ++ +H+ G IHRDIKP+NLL+
Sbjct: 71  YLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI 130

Query: 77  DARGHIKLSDFGLC-TGL--KKSHRTDFY------RDLSQAKPSD------------FSY 115
           D  GH+KL+DFGL   GL  KK   T  Y        +   K SD            F Y
Sbjct: 131 DQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190

Query: 116 PPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRF-CSECDRRLGSARGVEE 172
           PPF +E P   +  ++S R  + +P EV    S EA + I R  C +  +RLG A G +E
Sbjct: 191 PPFHAETPDAVFDNILSRR--INWPEEVKEFCSPEAVDLINRLLCMDPAKRLG-ANGYQE 247

Query: 173 LKSLGACQFFRGVDWD 188
           +KS     FF+ ++WD
Sbjct: 248 IKSH---PFFKSINWD 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  130 bits (329), Expect = 3e-35
 Identities = 78/240 (32%), Positives = 118/240 (49%), Gaps = 38/240 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +Y ++EF+ GG++ T L K      +  +FY AE  LA + +H    I+RD+KP+N
Sbjct: 89  DENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPEN 148

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF-------- 113
           LLLD +GH+K++DFG     K   RT            +  +     K  D+        
Sbjct: 149 LLLDNKGHVKVTDFGFAK--KVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLY 206

Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS-A 167
                YPPF  + P   Y K+++ R  L FP        AR+ +      +  +RLG+  
Sbjct: 207 EFIAGYPPFFDDTPFRIYEKILAGR--LKFPNWF--DGRARDLVKGLLQTDHTKRLGTLK 262

Query: 168 RGVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
            GV ++K+     +F G +WD +  R  PA IPV+VKS  DTSNF+ +PD  ++    PL
Sbjct: 263 GGVADVKNH---PYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPDSPVD-RLPPL 318

Length = 329

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score =  130 bits (327), Expect = 1e-34
 Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 5/105 (4%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLY +M+++PGGDMM+LL++ +   E   +FYIAE  LAI+S+HK+GFIHRDIKPDN
Sbjct: 72  DKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK-----PSDF 113
           +L+D  GHIKL+DFGLCTG + +H + +Y+  S  +     PSD 
Sbjct: 132 ILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDL 176

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  128 bits (324), Expect = 2e-34
 Identities = 73/247 (29%), Positives = 100/247 (40%), Gaps = 63/247 (25%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L L+M++ PGG++  LL ++    LSEE  +FY AE  LA++ +H LG ++RD+KP+N+
Sbjct: 75  YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENI 134

Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFY------RDLSQAKPSD--FSYP---------- 116
           LL   GHI LSDF L                   R  S        FS            
Sbjct: 135 LLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVG 194

Query: 117 ------------------------------------PFCSENPQETYRKVMSWRDTLVFP 140
                                               PF   N  ET+  ++     + FP
Sbjct: 195 TEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILK--KEVTFP 252

Query: 141 PEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE-RPAAIP 198
              P+S  AR+ I +    +  +RLGS RG  E+K      FFRGV+W  IR   P  IP
Sbjct: 253 GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH---PFFRGVNWALIRHTTPPIIP 309

Query: 199 VQVKSID 205
                ID
Sbjct: 310 RPDDGID 316

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score =  125 bits (315), Expect = 8e-33
 Identities = 54/103 (52%), Positives = 76/103 (73%), Gaps = 2/103 (1%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLY +M+++PGGDMM+LL++     E+  +FYIAE   A++S+HK+GFIHRDIKPDN
Sbjct: 72  DKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYR--DLSQAKPSDFS 114
           +L+D  GHIKL+DFGLCTG + +H + +Y+  D  +    DFS
Sbjct: 132 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFS 174

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  124 bits (312), Expect = 8e-33
 Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 34/222 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLI+E+L GG++   L ++    E+   FY++E +LA++ +H+ G I+RD+KP+N+LLD
Sbjct: 75  LYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD 134

Query: 78  ARGHIKLSDFGLC----TGLKKSH---------------RTDFYRDLSQAKPSDFSY--- 115
           A+GH+KL+DFGLC         +H               R+   + +         Y   
Sbjct: 135 AQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDML 194

Query: 116 ---PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
              PPF +EN ++T  K++  +  L  PP   ++ EAR+ + +        RLG+  G  
Sbjct: 195 TGAPPFTAENRKKTIDKIL--KGKLNLPPY--LTPEARDLLKKLLKRNPSSRLGA--GPG 248

Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
           +   + +  FFR V+WD +  R    P +  ++S +D S FD
Sbjct: 249 DAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFD 290

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  124 bits (313), Expect = 1e-32
 Identities = 61/137 (44%), Positives = 80/137 (58%), Gaps = 8/137 (5%)

Query: 115 YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELK 174
           +PPFCSEN  ETYRK+++WR+TL FP ++ +S EA + I R  +  + RLG   G  E+K
Sbjct: 245 WPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRG-GAHEIK 303

Query: 175 SLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF--DDFPDV-KLEIPSAPLPQDGE- 230
           S     FFRGVDWD IR+  A    Q+KSI DTS F  D+   V +        P   E 
Sbjct: 304 SHP---FFRGVDWDTIRQIRAPFIPQLKSITDTSYFPTDELEQVPEAPALKQAAPAQQEE 360

Query: 231 IIYKDWVFINYTFKRFE 247
            +  D  FI YT+KRF+
Sbjct: 361 SVELDLAFIGYTYKRFD 377

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  118 bits (299), Expect = 3e-31
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 50/208 (24%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLY ++E+ P G+++  + K  +L E+CT+FY AE  LA++ +H  G IHRD+KP+N
Sbjct: 73  DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPEN 132

Query: 74  LLLDARGHIKLSDFG-------------LCTGLKKSHRTDFYRD---------------- 104
           +LLD   HIK++DFG                                             
Sbjct: 133 ILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPE 192

Query: 105 LSQAKPSDFS----------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEE 148
           L   KP+  S                 PPF   N   T++K++   +   FPP  P   +
Sbjct: 193 LLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILK-LE-YSFPPNFP--PD 248

Query: 149 ARETIVRFCS-ECDRRLGSARGVEELKS 175
           A++ I +    +   RLG   G +ELK+
Sbjct: 249 AKDLIEKLLVLDPQDRLGVNEGYDELKA 276

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  117 bits (296), Expect = 1e-30
 Identities = 76/237 (32%), Positives = 117/237 (49%), Gaps = 50/237 (21%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L ++ME++ GGD  TLL     L  +  + Y AET LA++ +H  G +HRD+KPDNLL+ 
Sbjct: 76  LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT 135

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY-----RDLSQ-----------------------AK 109
           + GHIKL+DFGL      S  T+ Y     +D  +                        K
Sbjct: 136 SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGK 195

Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP-EVPISEEARETIVRF 156
           P D+               PF  + P+E + +V+S  D + +P  +  +  +A++ I R 
Sbjct: 196 PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS--DDIEWPEGDEALPADAQDLISRL 253

Query: 157 CSECDR-RLGSARGVEELKSLGACQFFRGVDWDH-IRERPAAIPVQVKSIDDTSNFD 211
             +    RLG+  G  E+K     +FF G+DW+  +R++   IP Q++S DDTS FD
Sbjct: 254 LRQNPLERLGTG-GAFEVK---QHRFFLGLDWNGLLRQKAEFIP-QLESEDDTSYFD 305

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  114 bits (286), Expect = 7e-29
 Identities = 55/95 (57%), Positives = 64/95 (67%), Gaps = 7/95 (7%)

Query: 243 FKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPA 302
           ++    N P +FS  +   M+SKR+AE+WKKNRR LAYSTVGTPDYIAPEVF+QTGY   
Sbjct: 160 YRNLTHNPPSDFSFQN---MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKL 216

Query: 303 ADWWSLGVIMYEMLIAPEVFL----QTGYGPAADW 333
            DWWSLGVIMYEMLI    F     Q  Y    +W
Sbjct: 217 CDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNW 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  110 bits (278), Expect = 2e-28
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 30/179 (16%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +LYL+ME+  GGD+   L +   LSE+  +    +    ++ +H  G IHRD+KP+N+LL
Sbjct: 72  HLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILL 131

Query: 77  DARGHIKLSDFGLCTGLKKSHR-------TDFYR-------DLSQAKPSD-FSY------ 115
           D  G +K++DFGL   L KS         T +Y                D +S       
Sbjct: 132 DENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYE 191

Query: 116 -----PPFCSE---NPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                PPF  E   +  +  R+++        P     SEEA++ I +    +  +R  
Sbjct: 192 LLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPT 250

Length = 260

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  111 bits (279), Expect = 2e-28
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 37/229 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LY++ME++PGG++ + L      S     FY +E   A++ +H    ++RD+KP+N
Sbjct: 72  DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPEN 131

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF---------- 113
           +LLD  GHIKL+DFG    L+    T          +  +     K  D+          
Sbjct: 132 ILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEM 191

Query: 114 --SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDR--RLGSAR- 168
              YPPF  +NP   Y K+++ +  L FP  + +   A++ I +     DR  RLG+ + 
Sbjct: 192 LVGYPPFFDDNPFGIYEKILAGK--LEFPRHLDLY--AKDLIKKLL-VVDRTRRLGNMKN 246

Query: 169 GVEELKSLGACQFFRGVDWD---HIRERPAAIPVQVKSIDDTSNFDDFP 214
           G +++K+    ++F+ VDWD     + +P  +P +V    DTSNFDD+P
Sbjct: 247 GADDVKNH---RWFKSVDWDDVPQRKLKPPIVP-KVSHDGDTSNFDDYP 291

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  109 bits (273), Expect = 2e-27
 Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 36/226 (15%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L+ +ME++ GGD+M  + +     E   +FY AE  L +  +H+ G I+RD+K DN+LL
Sbjct: 70  RLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL 129

Query: 77  DARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFS------------- 114
           D+ GHIK++DFG+C  G+     T  +         ++   +P   +             
Sbjct: 130 DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEM 189

Query: 115 ---YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGV 170
                PF  ++  E ++ ++   D + +P    +S+EA+  +  F +   ++RLG     
Sbjct: 190 LAGQSPFEGDDEDELFQSILE--DEVRYP--RWLSKEAKSILKSFLTKNPEKRLGCLPTG 245

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDDF 213
           E+   +    FFR +DWD +  +   P   P ++K   D SNFDD 
Sbjct: 246 EQ--DIKGHPFFREIDWDKLERKEIKPPFKP-KIKGRFDVSNFDDE 288

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 3e-27
 Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 36/226 (15%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  LYL++ F+ GG++   L ++        +FY AE   A++++HK   I+RD+KP+N+
Sbjct: 65  PEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENI 124

Query: 75  LLDARGHIKLSDFGLCT-GLKKSHRTDFY------------RDLSQAKPSDF-------- 113
           LLD +GHI L DFGLC   +K   +T+ +                  K  D+        
Sbjct: 125 LLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLY 184

Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSAR 168
                 PPF  EN  E YRK++   + L FP       +A++ ++   S +  RRLG   
Sbjct: 185 EMLTGLPPFYDENVNEMYRKILQ--EPLRFPDG--FDRDAKDLLIGLLSRDPTRRLGYN- 239

Query: 169 GVEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFDD 212
           G +E+K+     FF  + W  +  +    P +  V S  DTSNFD+
Sbjct: 240 GAQEIKNH---PFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE 282

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 4e-27
 Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 35/226 (15%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
             +LYL+ +++ GG++   L K+   SE+  +FYIAE  LA++ +HK   ++RD+KP+N+
Sbjct: 68  DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENI 127

Query: 75  LLDARGHIKLSDFGLC-TGLKKSHRTDFY-------------RDLSQAKPSDF------- 113
           LLDA GHI L DFGL    L  +  T+ +              +    K  DF       
Sbjct: 128 LLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV 187

Query: 114 -----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
                 + PF +E+ Q+ YR +   +  + FP  V +S+E R+ +    +     RLG+ 
Sbjct: 188 FEMCCGWSPFYAEDTQQMYRNIAFGK--VRFPKNV-LSDEGRQFVKGLLNRNPQHRLGAH 244

Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
           R   ELK      FF  +DWD + ++    P    V S +D SNFD
Sbjct: 245 RDAVELKEH---PFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD 287

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  108 bits (271), Expect = 5e-27
 Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 42/226 (18%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLI++FL GGD+ T L K+   +EE  +FY+AE ALA+D +H LG I+RD+KP+N+LLD
Sbjct: 73  LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 132

Query: 78  ARGHIKLSDFGLCT----GLKKSHR---TDFY--------RDLSQAKPSDF-SYP----- 116
             GHIKL+DFGL        KK++    T  Y        R  +Q+  +D+ S+      
Sbjct: 133 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFE 190

Query: 117 ------PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR--FCSECDRRLGSA- 167
                 PF  ++ +ET   ++  +  L  P    +S EA ++++R  F      RLG+  
Sbjct: 191 MLTGSLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEA-QSLLRALFKRNPANRLGAGP 245

Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
            GVEE+K      FF  +DW+ +  R    P +  V   DDT  FD
Sbjct: 246 DGVEEIKRHP---FFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFD 288

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  106 bits (266), Expect = 9e-27
 Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 37/206 (17%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D   +Y++ME+  GG++ T+L  +    E   +FYIA   LA + +H  G I+RD+KP+
Sbjct: 63  KDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPE 122

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYR----------DLSQAKPSDFS-------- 114
           NLLLD+ G++KL DFG    LK   +T  +           ++   K  DFS        
Sbjct: 123 NLLLDSNGYVKLVDFGFAKKLKSGQKT--WTFCGTPEYVAPEIILNKGYDFSVDYWSLGI 180

Query: 115 --------YPPFCS--ENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD-RR 163
                    PPF    E+P E Y  ++     L FP    I + A++ I +        R
Sbjct: 181 LLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNY--IDKAAKDLIKQLLRRNPEER 238

Query: 164 LGSAR-GVEELKSLGACQFFRGVDWD 188
           LG+ + G++++K     ++F G DW+
Sbjct: 239 LGNLKGGIKDIK---KHKWFNGFDWE 261

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score =  107 bits (267), Expect = 3e-26
 Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 7/95 (7%)

Query: 243 FKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPA 302
           ++    + P +F+  +   M+SKR+AE+WK+NRR LA+STVGTPDYIAPEVF+QTGY   
Sbjct: 160 YRNLNHSLPSDFTFQN---MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKL 216

Query: 303 ADWWSLGVIMYEMLIAPEVFL----QTGYGPAADW 333
            DWWSLGVIMYEMLI    F     Q  Y    +W
Sbjct: 217 CDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNW 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  105 bits (263), Expect = 7e-26
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 39/224 (17%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
             +ME+  GGD+M + +  D  SE    FY A   L +  +H+   ++RD+K DNLLLD 
Sbjct: 78  CFVMEYAAGGDLM-MHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT 136

Query: 79  RGHIKLSDFGLCT-GLKKSHRTDFY----RDLSQAKPSDFSY------------------ 115
            G +K++DFGLC  G+    RT  +      L+    ++ SY                  
Sbjct: 137 EGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV 196

Query: 116 --PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA-RGVE 171
              PF  ++ +E +  +++  D + +P    +S EA   + R      +RRLGS  +  E
Sbjct: 197 GESPFPGDDEEEVFDSIVN--DEVRYP--RFLSREAISIMRRLLRRNPERRLGSGEKDAE 252

Query: 172 ELKSLGACQFFRGVDWD---HIRERPAAIPVQVKSIDDTSNFDD 212
           ++K      FFR ++WD     + +P  +P  +K  +D SNFD+
Sbjct: 253 DVKKQ---PFFRDINWDDLLARKIKPPFVP-TIKGPEDVSNFDE 292

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  102 bits (257), Expect = 3e-25
 Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 47/212 (22%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+LI++++ GG++ T L +++  +E   + YIAE  LA+D +H+LG I+RDIK +N+LLD
Sbjct: 80  LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD 139

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------------- 116
           + GH+ L+DFGL    K+    +  R  S     ++  P                     
Sbjct: 140 SEGHVVLTDFGLS---KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196

Query: 117 ----------PFCSENPQ----ETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECD 161
                     PF  +  Q    E  R+++  +    FP    +S EAR+ I +    +  
Sbjct: 197 LTFELLTGASPFTVDGEQNSQSEISRRIL--KSKPPFPKT--MSAEARDFIQKLLEKDPK 252

Query: 162 RRLGSARGVEELKSLGACQFFRGVDWDHIRER 193
           +RLG A G +E+K+     FF+G+DWD +  +
Sbjct: 253 KRLG-ANGADEIKNH---PFFQGIDWDDLAAK 280

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  102 bits (256), Expect = 8e-25
 Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 39/256 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+LI++++ GG+M T L ++D  SE+  +FY  E  LA++ +HKLG ++RDIK +N+LLD
Sbjct: 80  LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD 139

Query: 78  ARGHIKLSDFGLCTGL--KKSHRT------------DFYRDLS-QAKPSDF--------- 113
           + GH+ L+DFGL      ++  RT            +  R      K  D+         
Sbjct: 140 SEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFE 199

Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRF-CSECDRRLGSA 167
                 PF  E  + T  +V   R  L   P  P  I  EA++ + +    +  +RLG+ 
Sbjct: 200 LLTGASPFTLEGERNTQSEVS--RRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257

Query: 168 -RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNF-DDFPDVKLEIPSA 223
            +G  E+K      FF+G+DW+ +  R    P    +++  D  NF ++F +++     A
Sbjct: 258 PQGASEIKEH---PFFKGLDWEALALRKVNPPFRPSIRNELDVGNFAEEFTNLEPVYSPA 314

Query: 224 PLPQDGEIIYKDWVFI 239
             P  G  +++ + F+
Sbjct: 315 GTPPSGARVFQGYSFV 330

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  101 bits (254), Expect = 1e-24
 Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 38/224 (16%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +L+ +ME+L GGD+M  +       E   +FY AE    +  +HK G I+RD+K DN+LL
Sbjct: 70  HLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL 129

Query: 77  DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
           D  GHIK++DFG+C                          G K +   D++         
Sbjct: 130 DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189

Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
                PF  E+  E +  +++  D   FP    IS+EA++ + + F  +  +RLG    +
Sbjct: 190 LIGQSPFHGEDEDELFDSILN--DRPHFP--RWISKEAKDCLSKLFERDPTKRLGVDGDI 245

Query: 171 EELKSLGACQFFRGVDWDHI--RERPAAIPVQVKSIDDTSNFDD 212
                     FFRG+DW+ +  RE P     +VKS  D SNFD 
Sbjct: 246 R------QHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDR 283

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  100 bits (251), Expect = 1e-24
 Identities = 38/87 (43%), Positives = 56/87 (64%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  N+YL+++ L GGD+   L +K   SEE  +F+I E  LA++ +H  G IHRDIKPDN
Sbjct: 71  DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDN 130

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTD 100
           +LLD +GH+ ++DF + T +     T 
Sbjct: 131 ILLDEQGHVHITDFNIATKVTPDTLTT 157

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  101 bits (252), Expect = 3e-24
 Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 33/225 (14%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ +ME++ GGD+M  + +     E  ++FY AE  LA+  +H+ G I+RD+K DN+LLD
Sbjct: 71  LFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD 130

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
           A GH KL+DFG+C  G+     T  +         ++ Q      S              
Sbjct: 131 AEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMM 190

Query: 116 ---PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSE-CDRRLGSARGVE 171
              PPF ++N  + +  ++   D +++P  V +S+EA   +  F ++  ++RLG      
Sbjct: 191 AGQPPFEADNEDDLFESIL--HDDVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQG 246

Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD-DF 213
              ++    FF+ +DW  + +R    P   ++K+  D +NFD DF
Sbjct: 247 GEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDF 291

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  100 bits (250), Expect = 5e-24
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 48/263 (18%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +++++ GG++   L ++ +  E   +FY AE A A+  +H L  I+RD+KP+N+LLD
Sbjct: 71  LYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD 130

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSD---------------- 112
           ++GH+ L+DFGLC  G++ S  T  +         ++ + +P D                
Sbjct: 131 SQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEML 190

Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDR--RLGSARGV 170
           +  PPF S +  E Y  +++    L   P   IS  AR  +     + DR  RLG+    
Sbjct: 191 YGLPPFYSRDTAEMYDNILN--KPLRLKPN--ISVSARHLLEGLLQK-DRTKRLGAKDDF 245

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFD-DFPDVKLEIPSAPL- 225
            E+K+     FF  ++WD +  +   P   P  V    D  +FD +F   +  +P++   
Sbjct: 246 LEIKNH---VFFSSINWDDLVNKKITPPFNP-NVSGPMDLKHFDPEF--TEEPVPNSVGK 299

Query: 226 PQDGEIIY-----KDWVFINYTF 243
             D  ++       D  F+ +++
Sbjct: 300 SPDSVLVSASVKEADDAFLGFSY 322

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  100 bits (250), Expect = 1e-23
 Identities = 40/56 (71%), Positives = 45/56 (80%)

Query: 262 MDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           M SK +  +WKKNRR +AYSTVGTPDYIAPE+FLQ GYG   DWWSLG IM+E LI
Sbjct: 188 MSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLI 243

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 96.5 bits (240), Expect = 1e-22
 Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 37/236 (15%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L+ +MEF+ GGD+M  + K     E   +FY AE   A+  +H  G I+RD+K DN+
Sbjct: 68  PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNV 127

Query: 75  LLDARGHIKLSDFGLCT-GLKKSHRT------------DFYRDLSQAKPSDF-------- 113
           LLD  GH KL+DFG+C  G+     T            +  +++      D+        
Sbjct: 128 LLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLY 187

Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS-A 167
                + PF +EN  + +  ++   D +V+P    +S++A + +  F +     RLGS  
Sbjct: 188 EMLCGHAPFEAENEDDLFEAIL--NDEVVYPTW--LSQDAVDILKAFMTKNPTMRLGSLT 243

Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIP 221
            G EE  ++    FF+ +DW+ +  R    P   ++KS +D SNFD  PD   E P
Sbjct: 244 LGGEE--AILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFD--PDFIKEDP 295

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 98.8 bits (246), Expect = 1e-22
 Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 17/111 (15%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           N+YL+ME+L GGD+ +LL       EE    YI+E ALA+D +H+ G IHRD+KPDN+L+
Sbjct: 78  NVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI 137

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDL---------SQAKPS-DFSYPP 117
              GHIKL+DFGL        +    R+L         S AKP  D+S  P
Sbjct: 138 SNEGHIKLTDFGLS-------KVTLNRELNMMDILTTPSMAKPKNDYSRTP 181

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 94.5 bits (235), Expect = 6e-22
 Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 39/244 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE A+ +  +H  G I+RD+K DN++LD
Sbjct: 76  LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135

Query: 78  ARGHIKLSDFGLCTG---LKKSHRTDFYRDLSQAKPSDFSY------------------- 115
           A GHIK++DFG+C       K+ RT F        P   +Y                   
Sbjct: 136 AEGHIKIADFGMCKENIFGGKTTRT-FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 194

Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSARGV 170
               PPF  E+  E ++ +M   +  V  P+  +S+EA        ++   +RLG   G 
Sbjct: 195 LAGQPPFDGEDEDELFQSIM---EHNVSYPK-SLSKEAVSICKGLLTKHPAKRLGC--GP 248

Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIPSAPLPQD 228
              + +    FFR +DW+ +  R    P   +VK      NFD F       P    P D
Sbjct: 249 TGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKF---FTREPPVLTPPD 305

Query: 229 GEII 232
             +I
Sbjct: 306 KLVI 309

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 94.3 bits (235), Expect = 9e-22
 Identities = 33/60 (55%), Positives = 36/60 (60%)

Query: 258 STNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           +    D+        K RR  A STVGTPDYIAPEV   T YG   DWWSLGVI+YEML 
Sbjct: 166 NLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY 225

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 93.7 bits (233), Expect = 1e-21
 Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 35/252 (13%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
              L+ ++EF+ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+
Sbjct: 68  ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNV 127

Query: 75  LLDARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY---------- 115
           LLDA GHIKL+D+G+C  G++    T  +         ++ + +   FS           
Sbjct: 128 LLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 187

Query: 116 ------PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDR- 162
                  PF     S+NP +     + ++  L     +P  +S +A   +  F ++  + 
Sbjct: 188 EMMAGRSPFDIVGMSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKASSVLKGFLNKDPKE 246

Query: 163 RLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPS 222
           RLG        + + +  FFR +DWD + ++    P +  +I+   + D+F     + P 
Sbjct: 247 RLGCHPQ-TGFRDIKSHPFFRNIDWDLLEQKQVLPPYK-PNIESDRDLDNFDPQFTDEPV 304

Query: 223 APLPQDGEIIYK 234
              P D ++I +
Sbjct: 305 QLTPDDPDVIAR 316

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 91.1 bits (227), Expect = 1e-21
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D  +LYL+ME+  GG +  LL + +  LSE+     + +    ++ +H  G IHRD+KP+
Sbjct: 62  DENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPE 121

Query: 73  NLLLDAR-GHIKLSDFGLCTGLKKSHRTD 100
           N+LLD+  G +KL+DFGL   L       
Sbjct: 122 NILLDSDNGKVKLADFGLSKLLTSDKSLL 150

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 92.0 bits (228), Expect = 4e-21
 Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 37/223 (16%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +++F+ GG++   L ++ +  E   +FY AE A A+  +H +  ++RD+KP+N+LLD
Sbjct: 71  LYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD 130

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSD---------------- 112
           ++GH+ L+DFGLC  G+ +S  T  +         ++ + +P D                
Sbjct: 131 SQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEML 190

Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDR--RLGSARGV 170
           +  PPF   +  E Y  ++     LV  P   +      +I+    E DR  RLG+    
Sbjct: 191 YGLPPFYCRDVAEMYDNIL--HKPLVLRPGASL---TAWSILEELLEKDRQRRLGAKEDF 245

Query: 171 EELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFD 211
            E++      FF  + W  + ++  P      V+  DD SNFD
Sbjct: 246 LEIQEH---PFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFD 285

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 91.2 bits (226), Expect = 8e-21
 Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 38/223 (17%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           NL+ +ME+L GGD+M  +            FY AE    +  +H  G ++RD+K DN+LL
Sbjct: 70  NLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL 129

Query: 77  DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
           D  GHIK++DFG+C                          G K +   D++         
Sbjct: 130 DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEM 189

Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
                PF   + +E ++ +    D   +P    ++ EA++ +V+ F  E +RRLG    +
Sbjct: 190 LIGQSPFHGHDEEELFQSIRM--DNPCYPRW--LTREAKDILVKLFVREPERRLGVKGDI 245

Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
            +        FFR +DW  + ER    P +  VKS +D SNFD
Sbjct: 246 RQHP------FFREIDWSALEEREIEPPFKPKVKSANDCSNFD 282

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 88.9 bits (220), Expect = 5e-20
 Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 37/249 (14%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+L++E++ GGD+M  + ++  L EE  +FY AE  +A++ +H+ G I+RD+K DN+LLD
Sbjct: 71  LFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD 130

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
           A GHIKL+D+G+C  GL     T  +         ++ + +   FS              
Sbjct: 131 ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM 190

Query: 116 ---PPF--CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDR-RLGS- 166
               PF   ++NP       + ++  L  P  +P  +S +A   +  F ++  + RLG  
Sbjct: 191 AGRSPFDIITDNPDMNTEDYL-FQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249

Query: 167 -ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
              G  ++KS     FFR +DWD + ++    P + +  DD    ++F       P    
Sbjct: 250 PQTGFSDIKSHT---FFRSIDWDLLEKKQVTPPFKPQITDDYG-LENFDTQFTSEPVQLT 305

Query: 226 PQDGEIIYK 234
           P D ++I +
Sbjct: 306 PDDEDVIKR 314

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 88.3 bits (219), Expect = 7e-20
 Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   SE+  +FY AE   A+  +H    ++RD+K +NL+LD
Sbjct: 70  LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD 129

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY----RDLSQAKPSDFSYP---------------- 116
             GHIK++DFGLC  G+        +      L+     D  Y                 
Sbjct: 130 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIV-RFCSECDRRLGSARGVE 171
               PF +++ ++ +  ++   + + FP    +S EA+  +      +  +RLG   G E
Sbjct: 190 CGRLPFYNQDHEKLFELILM--EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGG--GPE 243

Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FD+
Sbjct: 244 DAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDE 286

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 87.4 bits (216), Expect = 2e-19
 Identities = 68/246 (27%), Positives = 105/246 (42%), Gaps = 44/246 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE A+ +  +H  G I+RD+K DN++LD
Sbjct: 76  LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135

Query: 78  ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
           + GHIK++DFG+C              G       +        K  D+           
Sbjct: 136 SEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 195

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-----SECDRRLGSA 167
               PF  E+  E ++ +M     + +P    +S+EA    V  C         +RLG  
Sbjct: 196 AGQAPFEGEDEDELFQSIM--EHNVAYPKS--MSKEA----VAICKGLMTKHPGKRLGC- 246

Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSID-DTSNFDDFPDVKLEIPSAPLP 226
            G E  + +    FFR +DW+ +  +    P + K+   D  NFD F       P    P
Sbjct: 247 -GPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKACGRDAENFDKFFTRH---PPVLTP 302

Query: 227 QDGEII 232
            D E+I
Sbjct: 303 PDQEVI 308

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 86.1 bits (214), Expect = 2e-19
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 17  NLYLIMEFLPGG---DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            L+++MEF  GG   D++    +  TL+E    +   E    ++ +H  G IHRDIK  N
Sbjct: 71  ELWIVMEFCSGGSLKDLLKSTNQ--TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAAN 128

Query: 74  LLLDARGHIKLSDFGLCTGLKKS 96
           +LL + G +KL DFGL   L  +
Sbjct: 129 ILLTSDGEVKLIDFGLSAQLSDT 151

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 86.2 bits (213), Expect = 5e-19
 Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 45/229 (19%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE ++ +  +H+ G I+RD+K DN++LD
Sbjct: 76  LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD 135

Query: 78  ARGHIKLSDFGLCTGLKKSHRTD------FYRDLSQAKPSDFSY---------------- 115
           + GHIK++DFG+C    K H  D      F        P   +Y                
Sbjct: 136 SEGHIKIADFGMC----KEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 191

Query: 116 -------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSAR 168
                  PPF  E+  E ++ +M     + +P    +S+EA    V  C     +  S R
Sbjct: 192 YEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKS--LSKEA----VSICKGLMTKHPSKR 243

Query: 169 ---GVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTS-NFDDF 213
              G E  + +    FFR +DWD +  R    P + K     + NFD F
Sbjct: 244 LGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKVCGKGAENFDKF 292

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 85.4 bits (211), Expect = 1e-18
 Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 43/244 (17%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
              LY +++++ GG++   L ++    E   +FY AE A AI  +H L  I+RD+KP+N+
Sbjct: 68  AEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENI 127

Query: 75  LLDARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSD------------- 112
           LLD++GH+ L+DFGLC  G++    T  +         ++ + +P D             
Sbjct: 128 LLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLY 187

Query: 113 ---FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISE-EARETIVRFCSECD--RRLGS 166
              +  PPF S +  + Y  ++        P ++P  +  A   ++      D  RRLG+
Sbjct: 188 EMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLHKDQRRRLGA 241

Query: 167 ARGVEELKSLGACQFFRGVDWD---HIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSA 223
                E+K+     FF  ++WD   H R  P   P  V    D  +FD  P+   E  S+
Sbjct: 242 KADFLEIKNH---VFFSPINWDDLYHKRITPPYNP-NVAGPADLRHFD--PEFTQEAVSS 295

Query: 224 PLPQ 227
            + Q
Sbjct: 296 SVGQ 299

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 85.2 bits (211), Expect = 2e-18
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 13/142 (9%)

Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEE 172
              PPF ++ P ET  KV++W  TL  P +  +S EA + I+R C   + RLG   G +E
Sbjct: 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGK-NGADE 297

Query: 173 LKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDDFPDVKL------EIPSAP 224
           +K   A  FF+G+D+  +  R  A  IP  +    DTSNFD     KL      E     
Sbjct: 298 IK---AHPFFKGIDFASLIRRQKAPYIPK-ITHPTDTSNFDPVDPEKLRSDDSGESSPDR 353

Query: 225 LPQDGEIIYKDWVFINYTFKRF 246
             +       +  F  +TF+RF
Sbjct: 354 NVKPNNRKRTEHAFYEFTFRRF 375

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 27/80 (33%), Positives = 43/80 (53%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L + +E++ GG + +LL K   L E   + Y  +    +  +H  G +HRDIK  N+L+
Sbjct: 75  TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV 134

Query: 77  DARGHIKLSDFGLCTGLKKS 96
           D+ G +KL+DFG    L   
Sbjct: 135 DSDGVVKLADFGCAKRLGDI 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 83.1 bits (205), Expect = 5e-18
 Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 43/238 (18%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +++++ GG++   L ++    E   +FY AE A A+  +H L  ++RD+KP+N+LLD
Sbjct: 71  LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 130

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSD---------------- 112
           ++GHI L+DFGLC   ++ +  T  +         ++   +P D                
Sbjct: 131 SQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 190

Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDR--RLGSARGV 170
           +  PPF S N  E Y  +++    L   P   I+  AR  +     + DR  RLG+    
Sbjct: 191 YGLPPFYSRNTAEMYDNILN--KPLQLKPN--ITNSARHLLEGLLQK-DRTKRLGAKDDF 245

Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIPSAPLP 226
            E+K+     FF  ++WD +  +    P    V   +D  +FD       E    P+P
Sbjct: 246 MEIKNH---IFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDP------EFTEEPVP 294

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 82.8 bits (204), Expect = 7e-18
 Identities = 37/86 (43%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 71  LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 130

Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY 102
           + GHIKL+D+G+C  GL+    T  +
Sbjct: 131 SEGHIKLTDYGMCKEGLRPGDTTSTF 156

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 81.2 bits (200), Expect = 2e-17
 Identities = 33/72 (45%), Positives = 53/72 (73%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+LI++++ GG++ T L +++   E+  Q Y  E  LA++ +HKLG I+RDIK +N+LLD
Sbjct: 80  LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD 139

Query: 78  ARGHIKLSDFGL 89
           + GH+ L+DFGL
Sbjct: 140 SNGHVVLTDFGL 151

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 77.6 bits (192), Expect = 2e-16
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +  +   +  GTP+Y+APEV L  GYG A DWWSLGV++YEML
Sbjct: 144 SSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 77.9 bits (192), Expect = 2e-16
 Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 16/115 (13%)

Query: 2   KDYACLKQLRMSDPIN-------------LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY 48
           ++ A L QLR S P N             L++IME+  GG + TL MK   ++E+     
Sbjct: 48  REVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTL-MKAGPIAEKYISVI 106

Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK--KSHRTDF 101
           I E  +A+  IHK+G IHRDIK  N+L+   G++KL DFG+   L    S R+ F
Sbjct: 107 IREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF 161

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 78.1 bits (192), Expect = 3e-16
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 42/225 (18%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +L+ +MEFL GGD+M  +  K         FY AE    +  +H  G I+RD+K DN++L
Sbjct: 70  HLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML 129

Query: 77  DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
           D  GHIK++DFG+C                          GLK +   D++         
Sbjct: 130 DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEM 189

Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVR-FCSECDRRLGSAR 168
                PF  ++  E +  +    DT    P  P  I++E+++ + + F  +  RRLG   
Sbjct: 190 LIGQSPFHGDDEDELFESIR--VDT----PHYPRWITKESKDILEKLFERDPTRRLGVVG 243

Query: 169 GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
            +          FF+ ++W  + +R    P   +VKS  D SNFD
Sbjct: 244 NIRGHP------FFKTINWTALEKRELDPPFKPKVKSPSDYSNFD 282

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L+++ME++ GG +  ++ +    ++E    +   E    ++ +H    IHRDIK DN+LL
Sbjct: 90  LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL 149

Query: 77  DARGHIKLSDFGLCTGLKKSH 97
              G +KL+DFG    L K  
Sbjct: 150 SKDGSVKLADFGFAAQLTKEK 170

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 76.0 bits (188), Expect = 6e-16
 Identities = 24/47 (51%), Positives = 32/47 (68%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + + +      + VGTP+Y+APEV L  GYG A D WSLGVI+YE+L
Sbjct: 144 ARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELL 190

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 77.3 bits (190), Expect = 6e-16
 Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 35/221 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL++EF+ GG+  T L +      +   FY A+  L  + +  L  ++RD+KP+NLLLD
Sbjct: 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD 165

Query: 78  ARGHIKLSDFG-----------LCTGLKKSHRTDFYRDLSQAKPSD------FSY----- 115
             G IK++DFG           LC G  +    +   ++   K +D      F Y     
Sbjct: 166 KDGFIKMTDFGFAKVVDTRTYTLC-GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG 224

Query: 116 -PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS-ARGVEE 172
            PPF +  P   Y+K++   + +++ P+  +    +  + +  S +  +R G+  +G + 
Sbjct: 225 CPPFYANEPLLIYQKIL---EGIIYFPKF-LDNNCKHLMKKLLSHDLTKRYGNLKKGAQN 280

Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
           +K      +F  +DW  +  +   +P   + K++ D+SNF+
Sbjct: 281 VKEH---PWFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFE 318

Length = 340

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 77.0 bits (189), Expect = 7e-16
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 34/223 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 70  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 129

Query: 78  ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
             GHIK++DFGLC              G  +    +   D    +  D+           
Sbjct: 130 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 190 CGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGG--GPS 243

Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 244 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 286

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 75.7 bits (187), Expect = 9e-16
 Identities = 27/85 (31%), Positives = 44/85 (51%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +LY+I+E+   G +  ++ K     E     Y+ +    +  +H+ G IHRDIK  N+L 
Sbjct: 73  SLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT 132

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDF 101
              G +KL+DFG+ T L    + D 
Sbjct: 133 TKDGVVKLADFGVATKLNDVSKDDA 157

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 76.8 bits (189), Expect = 1e-15
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 4/81 (4%)

Query: 245 RFEANSPFE--FSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPA 302
           R ++  P E    +        +RR +  ++++R LA+S VGTP+YIAPEV L+TGY   
Sbjct: 167 RQDSMEPSEEWSEIDRCRLKPLERRRK--RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 224

Query: 303 ADWWSLGVIMYEMLIAPEVFL 323
            DWWS+GVI+YEML+    FL
Sbjct: 225 CDWWSVGVILYEMLVGQPPFL 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 76.7 bits (188), Expect = 1e-15
 Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 34/223 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME++ GG++   L ++   SE+ T+FY AE   A+D +H    ++RD+K +NL+LD
Sbjct: 70  LCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD 129

Query: 78  ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
             GHIK++DFGLC              G  +    +   D    +  D+           
Sbjct: 130 KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIV-RFCSECDRRLGSARGVE 171
               PF +++ ++ +  ++   + + FP    +S +A+  +      + ++RLG   G +
Sbjct: 190 CGRLPFYNQDHEKLFELIL--MEDIKFPRT--LSADAKSLLSGLLIKDPNKRLGG--GPD 243

Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +    FF GV+W  + ++    P   QV S  DT  FD+
Sbjct: 244 DAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDE 286

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 74.7 bits (183), Expect = 7e-15
 Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 2/61 (3%)

Query: 265 KRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
           +RRA   ++++R LA+S VGTP+YIAPEV L+TGY    DWWS+GVI+YEML+    FL 
Sbjct: 193 ERRAA--RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA 250

Query: 325 T 325
            
Sbjct: 251 Q 251

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 73.3 bits (181), Expect = 7e-15
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 17  NLYLIMEFLPGGDMMTLL----MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            L ++ME+  GGD+   +     +     EE    +  +  LA+  +H    +HRDIKP 
Sbjct: 73  KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQ 132

Query: 73  NLLLDARGHIKLSDFGLCT 91
           N+ L + G +KL DFG+  
Sbjct: 133 NIFLTSNGLVKLGDFGISK 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 73.1 bits (180), Expect = 9e-15
 Identities = 28/71 (39%), Positives = 38/71 (53%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y+ ME+  GG +  LL     L E   + Y  +    +  +H  G +HRDIKP N+ LD
Sbjct: 74  VYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD 133

Query: 78  ARGHIKLSDFG 88
             G IKL DFG
Sbjct: 134 HNGVIKLGDFG 144

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 72.4 bits (178), Expect = 1e-14
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 18  LYLIMEFLPGG---DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           L+L+M +L GG   D+M     +  L E      + E    ++ +H  G IHRDIK  N+
Sbjct: 74  LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNI 133

Query: 75  LLDARGHIKLSDFG 88
           LL   G +K++DFG
Sbjct: 134 LLGEDGSVKIADFG 147

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 71.7 bits (176), Expect = 2e-14
 Identities = 28/73 (38%), Positives = 44/73 (60%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           NLY+ +E +PGG +  LL K  +  E   + Y  +  L ++ +H    +HRDIK  N+L+
Sbjct: 76  NLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV 135

Query: 77  DARGHIKLSDFGL 89
           D  G +KL+DFG+
Sbjct: 136 DTNGVVKLADFGM 148

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 72.4 bits (177), Expect = 2e-14
 Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 70  LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 129

Query: 77  DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
           D  GHIK++DFGLC  G+K                       D+ R +         Y  
Sbjct: 130 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 189

Query: 118 FCSENP--QETYRKVMS--WRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
            C   P   + + K+      + + FP    +S EA+  +      +  +RLG   G ++
Sbjct: 190 MCGRLPFYNQDHEKLFELILMEEIRFPRT--LSPEAKSLLSGLLKKDPKQRLGG--GPDD 245

Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
            K +   +FF G+ W  + E+    P   QV S  DT  FD+
Sbjct: 246 AKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDE 287

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 71.8 bits (177), Expect = 3e-14
 Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 8/54 (14%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
            Y+  GTP+Y+APE+ L  GYG A DWW+LG+++YEML         GY P  D
Sbjct: 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA--------GYPPFFD 200

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 72.4 bits (177), Expect = 4e-14
 Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 24/145 (16%)

Query: 116 PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKS 175
           PPF +  P ET  KV++W +TL  PP+V +S EA + I + C   + RLG   G +++K 
Sbjct: 246 PPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGR-NGADDIK- 303

Query: 176 LGACQFFRGVDWD-HIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYK 234
             A  FF  VD+   IR +PA    ++    DTSNFD   +       +P         +
Sbjct: 304 --AHPFFSEVDFSSDIRTQPAPYVPKISHPMDTSNFDPVEE------ESPWNDASGDSTR 355

Query: 235 DW-------------VFINYTFKRF 246
            W              F  +TF+RF
Sbjct: 356 TWDTLCSPNGKHPEHAFYEFTFRRF 380

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 71.4 bits (175), Expect = 4e-14
 Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 31/201 (15%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
             +L L+M  + GGD+   +         E    FY A+    ++ +H+   ++RD+KP+
Sbjct: 65  KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPE 124

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYR--------DLSQAKPSDFS---------- 114
           N+LLD  G++++SD GL   LK   +             ++ Q +  DFS          
Sbjct: 125 NVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTL 184

Query: 115 YPPFCSENPQETYRKVMSWRD----TLVFPPEVP--ISEEARETIVRF-CSECDRRLGS- 166
           Y      +P    ++ +   +    TL    E P   S EA++        + ++RLG  
Sbjct: 185 YEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCR 244

Query: 167 ARGVEELKSLGACQFFRGVDW 187
               +E++       F+ ++W
Sbjct: 245 GGSADEVR---EHPLFKDLNW 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 71.5 bits (175), Expect = 4e-14
 Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 37/215 (17%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N+
Sbjct: 69  PDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANI 128

Query: 75  LLDARGHIKLSDFGLCTGL--KKSHR---TDFYRD---LSQAKPSDFS------------ 114
           LLD  GH+++SD GL      KK H    T  Y     L +    D S            
Sbjct: 129 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 188

Query: 115 ----YPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
               + PF      +T  K    R TL    E+P   S E R  +      + +RRLG  
Sbjct: 189 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 245

Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP 198
            RG +E+K      FFR +DW  +   +  P  IP
Sbjct: 246 GRGAQEVKE---HPFFRSLDWQMVFLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 72.0 bits (176), Expect = 6e-14
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 4/71 (5%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAA 331
           K+++R LA+S VGTP+YIAPEV L+ GY    DWWS+GVI++EML+    FL     P  
Sbjct: 198 KQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFL----APTP 253

Query: 332 DWWSLGVIMYE 342
               L VI +E
Sbjct: 254 TETQLKVINWE 264

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 71.7 bits (174), Expect = 6e-14
 Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D  +LYL+ME++ GG +  LL K   K  LSE    F +A+   A++ +H  G IHRDIK
Sbjct: 69  DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIK 128

Query: 71  PDNLLLDARGH-IKLSDFGLCTGLKKSH 97
           P+N+LLD  G  +KL DFGL   L    
Sbjct: 129 PENILLDRDGRVVKLIDFGLAKLLPDPG 156

Length = 384

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 70.4 bits (173), Expect = 7e-14
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 254 FSLSSTNPMD-SKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIM 312
           F LS    +       +  K+++R      VGTPDYIAPEV L  G+    DWWSLG I+
Sbjct: 137 FGLSKVGLVRRQINLNDDEKEDKR-----IVGTPDYIAPEVILGQGHSKTVDWWSLGCIL 191

Query: 313 YEMLI 317
           YE L+
Sbjct: 192 YEFLV 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 70.3 bits (173), Expect = 7e-14
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           + +++E++ GG +  LL K   + E    +   +    +D +H K   IHRDIKP NLL+
Sbjct: 74  ISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI 133

Query: 77  DARGHIKLSDFGLCTGL 93
           +++G +K++DFG+   L
Sbjct: 134 NSKGEVKIADFGISKVL 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 70.0 bits (172), Expect = 9e-14
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 9/81 (11%)

Query: 18  LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG-----FIHRD 68
           LY++ME+  GGD+  L+ K    +  + EE     + +  LA+   H         +HRD
Sbjct: 76  LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRD 135

Query: 69  IKPDNLLLDARGHIKLSDFGL 89
           +KP N+ LDA  ++KL DFGL
Sbjct: 136 LKPANIFLDANNNVKLGDFGL 156

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 18  LYLIMEFLPGGDMMTL--LMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           LY + E++ G     L  LMK       SE   +  I +    +  IHK GF HRD+KP+
Sbjct: 73  LYFVFEYMEG----NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPE 128

Query: 73  NLLLDARGHIKLSDFGL 89
           NLL+     +K++DFGL
Sbjct: 129 NLLVSGPEVVKIADFGL 145

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 70.0 bits (171), Expect = 1e-13
 Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 37/215 (17%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L  I++ + GGD+   L +    SE+  +FY  E  L ++ +H    ++RD+KP N+
Sbjct: 69  PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANI 128

Query: 75  LLDARGHIKLSDFGLCTGL--KKSHR---TDFYRD---LSQAKPSDFS------------ 114
           LLD  GH+++SD GL      KK H    T  Y     L +    D S            
Sbjct: 129 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFK 188

Query: 115 ----YPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
               + PF      +T  K    R TL    E+P   S E +  +      +  +RLG  
Sbjct: 189 LLRGHSPF---RQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCL 245

Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP 198
            RG +E+K      FF+G+DW  +   +  P  IP
Sbjct: 246 GRGAQEVKEH---VFFKGIDWQQVYLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 69.3 bits (169), Expect = 4e-13
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)

Query: 116 PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKS 175
           PPF ++ P ET  KV++W+ +L  PP+  +S EA + I++ C   + RLG   G +E+K 
Sbjct: 246 PPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGK-NGADEIK- 303

Query: 176 LGACQFFRGVDWDH-IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEII-- 232
             A  FF+ +D+   +R++ A    ++    DTSNFD     KL           + +  
Sbjct: 304 --AHPFFKTIDFSSDLRQQSAPYIPKITHPTDTSNFDPVDPDKLWSDDDKEGNVNDTLNG 361

Query: 233 ------YKDWVFINYTFKRF 246
                 + +  F  +TF+RF
Sbjct: 362 WYKNGKHPEHAFYEFTFRRF 381

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 67.8 bits (166), Expect = 8e-13
 Identities = 23/34 (67%), Positives = 27/34 (79%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTPDYIAPE+     YGPA DWW+LGV++YEML 
Sbjct: 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 29/42 (69%)

Query: 275 RRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                ++  GTP+Y+APE+ L  GY  + D+WSLG+++YE+L
Sbjct: 145 SGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 25/46 (54%), Positives = 27/46 (58%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           K     L  ST GTP Y+APEV  + GY  A DWWSLGV  YE L 
Sbjct: 149 KVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLR 194

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 11/86 (12%)

Query: 16  INLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           I LY          LIM+++  GD+  LL K+  LSE   +  I +   A++ +HK   I
Sbjct: 72  IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNII 131

Query: 66  HRDIKPDNLLLD-ARGHIKLSDFGLC 90
           H DIK +N+L D A+  I L D+GLC
Sbjct: 132 HNDIKLENVLYDRAKDRIYLCDYGLC 157

Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+  GG  + LL K   L E    F + E  L ++ +H+ G IHRDIK  N+LL
Sbjct: 73  KLWIIMEYCGGGSCLDLL-KPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL 131

Query: 77  DARGHIKLSDFG 88
              G +KL+DFG
Sbjct: 132 SEEGDVKLADFG 143

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 66.4 bits (162), Expect = 1e-12
 Identities = 29/83 (34%), Positives = 55/83 (66%), Gaps = 1/83 (1%)

Query: 6   CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           CL +  +S+  +++L+++   GG + + + K   + EEC + + AE  +A+D++H+ G +
Sbjct: 49  CLHKYIVSED-SVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIV 107

Query: 66  HRDIKPDNLLLDARGHIKLSDFG 88
            RD+ P+N+LLD RGHI+L+ F 
Sbjct: 108 CRDLNPNNILLDDRGHIQLTYFS 130

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)

Query: 17  NLYLIMEFLPGG---DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +L+++ME+   G   D+M +  K  TL+EE     + +T   ++ +H    IHRDIK  N
Sbjct: 72  DLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGN 129

Query: 74  LLLDARGHIKLSDFGLCTGL 93
           +LL+  G  KL+DFG+   L
Sbjct: 130 ILLNEEGQAKLADFGVSGQL 149

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 66.4 bits (163), Expect = 2e-12
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            LY++ME++ GGD+++ L K +  LS      +  + A  ++ +    FIHRD+   N L
Sbjct: 75  PLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCL 134

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYR 103
           +     +K+SDFGL    +  +  D+YR
Sbjct: 135 VGENLVVKISDFGLS---RDLYDDDYYR 159

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 19/100 (19%)

Query: 17  NLYLIMEFLPG------GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           N+ L+ EF+         D   +L   D  S      Y+  T   ++ +H    +HRD+K
Sbjct: 76  NINLVFEFMETDLEKVIKDKSIVLTPADIKS------YMLMTLRGLEYLHSNWILHRDLK 129

Query: 71  PDNLLLDARGHIKLSDFGLCT-----GLKKSHR--TDFYR 103
           P+NLL+ + G +KL+DFGL         K +H+  T +YR
Sbjct: 130 PNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYR 169

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +LYL+ EF+       +  ++  L E   + Y+ +    +   H  G +HRD+KP+NLL+
Sbjct: 72  DLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI 131

Query: 77  DARGHIKLSDFGLCTGLKKSHR-------TDFYR 103
           +  G +KL+DFGL        R       T +YR
Sbjct: 132 NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYR 165

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 64.8 bits (158), Expect = 9e-12
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+YIAPEV L+ GYG   DWW++G+I+YE L+
Sbjct: 178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV 211

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 64.5 bits (158), Expect = 9e-12
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           ++Y++ E++   D+  LL   +   +E   + Y+ +    +  +H  G +HRDIK  N+L
Sbjct: 74  SIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNIL 132

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDF 101
           ++  G +KL+DFGL     K +  D+
Sbjct: 133 INNDGVLKLADFGLARPYTKRNSADY 158

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 22/122 (18%)

Query: 18  LYLIMEFLPGG---DMM-TLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           L+L+ME   GG   D++  L  K   L EE   + + ET   +  +H+   IHRDIK  N
Sbjct: 84  LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQN 143

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF--------CSENPQE 125
           +LL     +KL DFG+   L            +  + + F   P+        C E P  
Sbjct: 144 ILLTKNAEVKLVDFGVSAQLDS----------TLGRRNTFIGTPYWMAPEVIACDEQPDA 193

Query: 126 TY 127
           +Y
Sbjct: 194 SY 195

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 64.1 bits (156), Expect = 1e-11
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 33/199 (16%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M      EE   FY AE    ++ +H+   ++RD+KP+N+L
Sbjct: 75  LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENIL 134

Query: 76  LDARGHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSYPP------------ 117
           LD  GHI++SD GL   + +         T  Y      K   +++ P            
Sbjct: 135 LDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEM 194

Query: 118 FCSENPQETYRKVMSWRDTLVFPPEVP------ISEEARETIVR--FCSECDRRLGSAR- 168
              ++P    ++ +   +      E         SE AR +I R     +   RLG    
Sbjct: 195 IEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAAR-SICRQLLTKDPGFRLGCRGE 253

Query: 169 GVEELKSLGACQFFRGVDW 187
           G EE+K   A  FFR  ++
Sbjct: 254 GAEEVK---AHPFFRTANF 269

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 18  LYLIMEFLPGGDM-MTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L+++ME+  GG +     + +  LSE    +   ET   +  +H+ G IHRDIK  N+LL
Sbjct: 75  LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL 134

Query: 77  DARGHIKLSDFGLCTGLKKS 96
              G +KL+DFG+   L  +
Sbjct: 135 TEDGDVKLADFGVSAQLTAT 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 63.3 bits (155), Expect = 2e-11
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L ++ME++PGGD++  L K     LS      +  + A  ++ +    FIHRD+   N 
Sbjct: 75  PLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNC 134

Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
           L+     +K+SDFGL    +  +  D+Y+
Sbjct: 135 LVGENLVVKISDFGLS---RDLYDDDYYK 160

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 15/109 (13%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG 63
           Y CL+     D   L + ME++PGG +   L     L+E  T+ Y  +    ++ +H   
Sbjct: 70  YGCLR-----DDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM 124

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFG-------LC---TGLKKSHRTDFY 102
            +HRDIK  N+L D+ G++KL DFG       +C   TG+K    T ++
Sbjct: 125 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYW 173

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 18/121 (14%)

Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++   L+QLR  + +NL          YL+ E++    +  L      L  +  + YI 
Sbjct: 48  LREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIW 107

Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC---TGLKKSHRTDF-----Y 102
           +   AI   H    IHRDIKP+N+L+   G +KL DFG          S  TD+     Y
Sbjct: 108 QLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWY 167

Query: 103 R 103
           R
Sbjct: 168 R 168

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 62.9 bits (153), Expect = 3e-11
 Identities = 22/33 (66%), Positives = 28/33 (84%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTPDYIAPE+  +  YGP+ DWW+LGV+MYEM+
Sbjct: 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMM 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 62.5 bits (153), Expect = 3e-11
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
           LY++ E++PGGD++  L    + L+ +     +A + A  ++ +    F+HRD+   N L
Sbjct: 76  LYIVTEYMPGGDLLDFLRKHGEKLTLK-DLLQMALQIAKGMEYLESKNFVHRDLAARNCL 134

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +     +K+SDFGL    +  +  D+YR     K
Sbjct: 135 VTENLVVKISDFGLS---RDIYEDDYYRKRGGGK 165

Length = 258

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 21/40 (52%), Positives = 26/40 (65%)

Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             A S VG+PDY+APEV    GY    D+WSLG ++YE L
Sbjct: 153 TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFL 192

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 62.6 bits (152), Expect = 4e-11
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +D +N++L  E++PGG +  LL       E   + ++ +    ++ +H  G IHRDIK  
Sbjct: 78  ADHLNIFL--EYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGA 135

Query: 73  NLLLDARGHIKLSDFGL 89
           N+L+D +G IK+SDFG+
Sbjct: 136 NILVDNKGGIKISDFGI 152

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 279 AYSTVGTPDYIAPEV-FLQTGYGPAADWWSLGVIMYEML 316
             + VGTP Y+APEV     GYGP  D WSLGVI+YE+L
Sbjct: 155 LTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELL 193

Length = 260

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 62.7 bits (152), Expect = 5e-11
 Identities = 22/39 (56%), Positives = 31/39 (79%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           Y+  GTP+YIAPE+ L  G+G AADWW+LG+ +YE+L+ 
Sbjct: 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG 224

Length = 340

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.8 bits (151), Expect = 5e-11
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 12/101 (11%)

Query: 18  LYLIMEFLPGGDMMTLL---------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           LYL++E++ GGD++  L          +K TLS +    +  + A  ++ +    F+HRD
Sbjct: 71  LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRD 130

Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +   N L+     +K+SDFGL    +  +  D+YR  +  K
Sbjct: 131 LAARNCLVGEDLVVKISDFGLS---RDVYDDDYYRKKTGGK 168

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 62.1 bits (151), Expect = 6e-11
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 7/100 (7%)

Query: 1   MKDYACLKQLRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL-A 55
           M+DY     + M         L+++MEFL GG  +T ++    ++EE     +    L A
Sbjct: 70  MRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIA-TVCLAVLKA 127

Query: 56  IDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
           +  +H  G IHRDIK D++LL + G +KLSDFG C  + K
Sbjct: 128 LSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 61.6 bits (149), Expect = 9e-11
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 1   MKDYACLKQLRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAI 56
           M+DY     + M         L+++MEFL GG  +T ++ +  L+EE           A+
Sbjct: 72  MRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG-ALTDIVSQTRLNEEQIATVCESVLQAL 130

Query: 57  DSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
             +H  G IHRDIK D++LL   G +KLSDFG C  + K
Sbjct: 131 CYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 169

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S VGT +YIAPEV    G+G A DWW+LG+++YEML
Sbjct: 191 SFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEML 226

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 24/49 (48%), Positives = 29/49 (59%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           N    A +  GTPDYIAPE+     Y  + DWWS GV++YEMLI    F
Sbjct: 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 31/167 (18%)

Query: 18  LYLIMEFLPGGDMMTLL----MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           L ++ME+ P GD+   +     K+  + E+       +    + ++H+   +HRD+K  N
Sbjct: 74  LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSAN 133

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR-----TDFYR--DLSQAKPSDFS------------ 114
           +LL A   +K+ D G+   LKK+       T  Y   ++ + +P  +             
Sbjct: 134 ILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYE 193

Query: 115 ----YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
                PPF + + Q+   KV   +    +PP  PI  +  +  +R  
Sbjct: 194 MATFAPPFEARSMQDLRYKVQRGK----YPPIPPIYSQDLQNFIRSM 236

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 94  LWVVMEFLEGG-ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 152

Query: 78  ARGHIKLSDFGLCTGLKK 95
           + G IKLSDFG C  + K
Sbjct: 153 SDGRIKLSDFGFCAQVSK 170

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M      EE   FY AE    ++ +H+   ++RD+KP+N+L
Sbjct: 75  LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENIL 134

Query: 76  LDARGHIKLSDFGL 89
           LD  GHI++SD GL
Sbjct: 135 LDDYGHIRISDLGL 148

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA-PEVFLQTGYG 328
           ++  GTP+Y+APEV    G+  A DWW+LG+++YEML+  P  F    +G
Sbjct: 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG 205

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTPDYIAPE+  +  YGP+ DWW++GV++YEML
Sbjct: 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGF 64
             L      + ++++L  E++PGG + + L       E+  +F+  +    +  +H  G 
Sbjct: 72  QYLGFETTEEYLSIFL--EYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGI 129

Query: 65  IHRDIKPDNLLLDARGHIKLSDFGL 89
           +HRD+K DNLL+DA G  K+SDFG+
Sbjct: 130 LHRDLKADNLLVDADGICKISDFGI 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 13/89 (14%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQ-FYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C     IA    E   A++ +H    IHRDIK D
Sbjct: 91  LWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 144

Query: 73  NLLLDARGHIKLSDFGLCTGL--KKSHRT 99
           N+LL   G +KL+DFG C  +  ++S R+
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRS 173

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)

Query: 5   ACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETA 53
           + LK+L+          +     LYL+ E+    D+   L K+   LS    +  + +  
Sbjct: 50  SLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLL 108

Query: 54  LAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             +   H    +HRD+KP N+L++  G +KL+DFGL
Sbjct: 109 RGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGL 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 60.4 bits (146), Expect = 2e-10
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M      E+   FY AE    ++ + +   ++RD+KP+N+L
Sbjct: 75  LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENIL 134

Query: 76  LDARGHIKLSDFGLCTGLKKSHR 98
           LD RGHI++SD GL   + +   
Sbjct: 135 LDDRGHIRISDLGLAVQIPEGET 157

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 25/72 (34%), Positives = 40/72 (55%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
             L+ME++P      L  ++  L E   + Y+      +  +H  G +HRD+KP NLL+ 
Sbjct: 74  FVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS 133

Query: 78  ARGHIKLSDFGL 89
           A G +K++DFGL
Sbjct: 134 ADGVLKIADFGL 145

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 23/39 (58%), Positives = 27/39 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTPDYIAPE+ L   Y  + DWWS GV++YEMLI    F
Sbjct: 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 92  LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT 150

Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 151 HDGRVKLSDFGFCAQVSK 168

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 60.2 bits (146), Expect = 4e-10
 Identities = 20/33 (60%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTPDYIAPE+     YG + DWW+ GV++YEML
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 195

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 5/39 (12%)

Query: 283 VGTPDYIAPEVFLQTG-----YGPAADWWSLGVIMYEML 316
           VGTPDYI+PE+          YGP  DWWSLGV MYEML
Sbjct: 164 VGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 59.1 bits (143), Expect = 7e-10
 Identities = 28/56 (50%), Positives = 31/56 (55%), Gaps = 8/56 (14%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQT-------GYGPAADWWSLGVIMYEMLIAPEVF 322
           N+   +   VGTPDYIAPEV L T        YG   DWWSLGVI YEM+     F
Sbjct: 155 NKMVNSKLPVGTPDYIAPEV-LTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 58.6 bits (142), Expect = 8e-10
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 9/89 (10%)

Query: 6   CLKQLRMSDPINLYLIMEFLPGGDM-----MTLLMKKDTLSEECTQFYIAETALAIDSIH 60
           CL+ + M +   LYLI EFL    M     +  L K   +  E  + Y+ +    I   H
Sbjct: 63  CLQDVLMQES-RLYLIFEFL---SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH 118

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
               +HRD+KP NLL+D +G IKL+DFGL
Sbjct: 119 SRRVLHRDLKPQNLLIDNKGVIKLADFGL 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 59.5 bits (144), Expect = 9e-10
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 5/53 (9%)

Query: 264 SKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S RR  +  +  R L     GTPDY+APE+ L   +GPA DWW+LGV ++E L
Sbjct: 527 SVRRGAAPVEGERIL-----GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFL 574

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 58.2 bits (140), Expect = 9e-10
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L+L+MEF   G +  L+   K +TL EE   +   E    +  +H+   IHRDIK  N+L
Sbjct: 84  LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 143

Query: 76  LDARGHIKLSDFGLCTGLKKS--HRTDFYRDLSQAKPSDFSYPPFCSENPQETY 127
           L     +KL DFG+   L ++   R  F        P   +    C ENP  TY
Sbjct: 144 LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA----CDENPDATY 193

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 5/53 (9%)

Query: 264 SKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           SK   +  KK     AYS  GT +Y+APEV  + G+  +ADWWS GV+M+EML
Sbjct: 145 SKESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 192

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+++APEV  +T Y  A DWW LGV++YEML+
Sbjct: 163 GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV 196

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +YL+ E+     M T L   ++ + L +   ++ + +   A+  IH    IHRD+KP N+
Sbjct: 84  IYLVFEY-----METDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNI 138

Query: 75  LLDARGHIKLSDFGLC 90
           LL++   +KL+DFGL 
Sbjct: 139 LLNSDCRVKLADFGLA 154

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +L L+M  + GGD+   +   D       E    FY A+    ++ +H+   I+RD+KP+
Sbjct: 67  DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPE 126

Query: 73  NLLLDARGHIKLSDFGLCTGLK 94
           N+LLD  G++++SD GL   LK
Sbjct: 127 NVLLDNDGNVRISDLGLAVELK 148

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 8/53 (15%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           ++  GTP+Y+APEV    G+G A DWW++GV++YE +         GY P  D
Sbjct: 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA--------GYPPFFD 217

Length = 329

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 17  NLYLIMEFLPGGDM-MTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            L L+ E +   DM +  L+K  K  L E+  + Y+ +   ++D +H+ G  HRDIKP+N
Sbjct: 74  RLALVFELM---DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPEN 130

Query: 74  LLLDARGHIKLSDFGLCTGL 93
           +L+     +KL+DFG C G+
Sbjct: 131 ILIKD-DILKLADFGSCRGI 149

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
             YL+ E++   D+M LL       SE+  + ++ +    ++  HK  F+HRDIK  N+L
Sbjct: 90  AFYLVFEYM-DHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNIL 148

Query: 76  LDARGHIKLSDFGL 89
           L+ +G IKL+DFGL
Sbjct: 149 LNNKGQIKLADFGL 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + YL+M F+  G  +  LMK + LSE+  QF + +    +  IH  G IHRD+KP NL +
Sbjct: 94  DFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV 151

Query: 77  DARGHIKLSDFGL 89
           +    +K+ DFGL
Sbjct: 152 NEDCELKILDFGL 164

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 18  LYLIMEFLPGGDMMTLLMK--KDTLSEECT-QFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           L ++ME+   GD+  LL       L E+   +F+I +  L +  +H    +HRDIK  NL
Sbjct: 74  LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFI-QILLGLAHLHSKKILHRDIKSLNL 132

Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENP 123
            LDA  ++K+ D G+   L  S  T+F   +    P   S P  C + P
Sbjct: 133 FLDAYDNVKIGDLGVAKLL--SDNTNFANTIV-GTPYYLS-PELCEDKP 177

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 57.3 bits (138), Expect = 2e-09
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M +    E    FY AE    ++ +H+   ++RD+KP+N+L
Sbjct: 75  LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENIL 134

Query: 76  LDARGHIKLSDFGL 89
           LD  GHI++SD GL
Sbjct: 135 LDDHGHIRISDLGL 148

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 57.9 bits (140), Expect = 3e-09
 Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 4/45 (8%)

Query: 283 VGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVFL 323
           VGTPDYI+PEV    G    YG   DWWS+GV +YEML+    F 
Sbjct: 204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 8/47 (17%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
           VGTPDY+APE  L  G    +DWWSLG +++E L         GY P
Sbjct: 154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFL--------FGYPP 192

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEM 315
            + VGTP Y+APEV L  G Y   +D WSLGVI+YE+
Sbjct: 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 56.8 bits (137), Expect = 3e-09
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 6   CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
            L         NL++  E++ GG +  LL K     E     Y  +    +  +H+   I
Sbjct: 68  MLGATCEDSHFNLFV--EWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQII 125

Query: 66  HRDIKPDNLLLDARGH-IKLSDFG 88
           HRD+K  NLL+D+ G  ++++DFG
Sbjct: 126 HRDVKGANLLIDSTGQRLRIADFG 149

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 57.5 bits (140), Expect = 3e-09
 Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ E +   D+  ++     L+++  Q+++ +    +  +H    IHRD+KP N+L++
Sbjct: 79  VYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN 137

Query: 78  ARGHIKLSDFGL 89
           +   +K+ DFGL
Sbjct: 138 SNCDLKICDFGL 149

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +D  ++Y++M+ L   D+  ++     L+EE  ++++ +    +  IH    IHRD+KP 
Sbjct: 78  ADFKDVYVVMD-LMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPS 136

Query: 73  NLLLDARGHIKLSDFGLCTGLKKS 96
           NLL++    +++ DFG+  GL  S
Sbjct: 137 NLLVNEDCELRIGDFGMARGLSSS 160

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           M++   LKQLR  + +NL          YL+ EF+    +  L    + L E   + Y+ 
Sbjct: 48  MREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLF 107

Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG 88
           +    I+  H    IHRDIKP+N+L+   G +KL DFG
Sbjct: 108 QILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFG 145

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 56.5 bits (136), Expect = 3e-09
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQ--FYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +L L+M  + GGD+   +        E  +   Y A+    I  +H +  ++RD+KP+N+
Sbjct: 67  HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENV 126

Query: 75  LLDARGHIKLSDFGLCTGLK 94
           LLD +G+ +LSD GL   LK
Sbjct: 127 LLDDQGNCRLSDLGLAVELK 146

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 56.6 bits (136), Expect = 4e-09
 Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L+L+MEF   G +  L+   K + L E+   +   E    +  +H    IHRDIK  N+L
Sbjct: 94  LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVL 153

Query: 76  LDARGHIKLSDFGLCTGLKKS--HRTDFYRDLSQAKPSDFSYPPFCSENPQETY 127
           L     +KL DFG+   L ++   R  F        P   +    C ENP  TY
Sbjct: 154 LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA----CDENPDATY 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 5/45 (11%)

Query: 283 VGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
           VGTPDYI+PE+   ++ G   YGP  DWWSLGV MYEML     F
Sbjct: 164 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 255 SLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYE 314
           S   +N  D+       +KNRR  A S VGT +Y++PE+  +   G ++D W+LG I+Y+
Sbjct: 156 SSPESNKGDATNIDSQIEKNRRRFA-SFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQ 214

Query: 315 ML 316
           ML
Sbjct: 215 ML 216

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 56.1 bits (135), Expect = 6e-09
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           A +  GTPDYIAPE+     Y  + DWWS GV++YEMLI    F
Sbjct: 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 56.2 bits (135), Expect = 6e-09
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 55.8 bits (134), Expect = 6e-09
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTL--LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +LY++ME+  GGD+M    L +     E+    +  +  L +  IH+   +HRDIK  N+
Sbjct: 72  HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNI 131

Query: 75  LLDARGHIKLSDFG 88
            L   G +KL DFG
Sbjct: 132 FLTQNGKVKLGDFG 145

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 55.6 bits (135), Expect = 7e-09
 Identities = 19/36 (52%), Positives = 22/36 (61%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  GTP ++APEV     YG AAD WSLG  + EM 
Sbjct: 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMA 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 55.5 bits (134), Expect = 7e-09
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDM--MTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L + ME+  GG +    +  K     EE   +Y+ +   A+  IHK G +HRDIK  N+ 
Sbjct: 74  LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIF 133

Query: 76  LDARGHIKLSDFGL 89
           L   G IKL DFG+
Sbjct: 134 LTKAGLIKLGDFGI 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 55.9 bits (134), Expect = 7e-09
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 11/78 (14%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A+D +H    IHRDIK D
Sbjct: 91  LWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSD 144

Query: 73  NLLLDARGHIKLSDFGLC 90
           N+LL   G +KL+DFG C
Sbjct: 145 NILLGMDGSVKLTDFGFC 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 55.4 bits (133), Expect = 7e-09
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG 63
           Y CL   R  +   L + +E++PGG +   L     L+E  T+ Y  +    +  +H   
Sbjct: 70  YGCL---RDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM 126

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFG 88
            +HRDIK  N+L D+ G++KL DFG
Sbjct: 127 IVHRDIKGANILRDSAGNVKLGDFG 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 55.4 bits (133), Expect = 8e-09
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 4   YACLKQLRMSDPI--NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           Y CL+     DP+   L + ME +PGG +   L     L+E  T+ Y  +    +  +H 
Sbjct: 70  YGCLR-----DPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS 124

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFG 88
              +HRDIK  N+L D+ G++KL DFG
Sbjct: 125 NMIVHRDIKGANILRDSVGNVKLGDFG 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 55.7 bits (134), Expect = 9e-09
 Identities = 21/33 (63%), Positives = 27/33 (81%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APE+ L  GY  A DWW+LGV++YEML
Sbjct: 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEML 187

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 55.4 bits (134), Expect = 9e-09
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDS-----IHKLGFIHRDIKP 71
           ++ + ME++ GG +  +L +      E     + + A+A+         K   IHRD+KP
Sbjct: 73  DISICMEYMDGGSLDKILKEVQGRIPE---RILGKIAVAVLKGLTYLHEKHKIIHRDVKP 129

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDF 101
            N+L+++RG IKL DFG+   L  S    F
Sbjct: 130 SNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 55.5 bits (133), Expect = 9e-09
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG 63
           Y CL   R      L + ME++PGG +   L     L+E  T+ Y  +    +  +H   
Sbjct: 70  YGCL---RDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM 126

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFG 88
            +HRDIK  N+L D+ G++KL DFG
Sbjct: 127 IVHRDIKGANILRDSAGNVKLGDFG 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 55.5 bits (134), Expect = 9e-09
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY---IAETAL-AIDSIHKLGFIHRDIKPD 72
           ++ + ME+  GG + ++  K         +     IAE+ L  +  +H    IHRDIKP 
Sbjct: 75  SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPS 134

Query: 73  NLLLDARGHIKLSDFG 88
           N+LL  +G +KL DFG
Sbjct: 135 NILLTRKGQVKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GT +Y+APE+ +++G+G A DWWSLG +MY+ML
Sbjct: 162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDML 194

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 190

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
           +L  IHRD+KP N+LLD  G+IKL DFG+   L  S
Sbjct: 126 ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++ME+L GG + T ++ +  + E        E   A++ +H    IHRDIK DN+LL 
Sbjct: 91  LFVVMEYLAGGSL-TDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG 149

Query: 78  ARGHIKLSDFGLC 90
             G +KL+DFG C
Sbjct: 150 MDGSVKLTDFGFC 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 55.1 bits (132), Expect = 2e-08
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 5/45 (11%)

Query: 283 VGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
           VGTPDYI+PE+   ++ G   YGP  DWWSLGV MYEML     F
Sbjct: 164 VGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 18/29 (62%), Positives = 22/29 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+     YGPA DWW+LGV++YEML 
Sbjct: 163 IAPEILSYQPYGPAVDWWALGVLLYEMLA 191

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F   G     D
Sbjct: 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD 206

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 54.7 bits (131), Expect = 2e-08
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A++ +H    IHRDIK D
Sbjct: 92  LWVVMEYLAGGSLT------DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145

Query: 73  NLLLDARGHIKLSDFGLCTGL--KKSHRTDF 101
           N+LL   G +KL+DFG C  +  ++S R+  
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME+ PGG +   + K+    L E+    +  +  LA+  +H    +HRD+K  N+L
Sbjct: 74  LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNIL 133

Query: 76  LDARGHI-KLSDFGL 89
           LD    + K+ DFG+
Sbjct: 134 LDKHKMVVKIGDFGI 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 54.3 bits (130), Expect = 2e-08
 Identities = 28/72 (38%), Positives = 40/72 (55%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L++ MEF  GG +  +      LSE    +   ET   +  +H  G +HRDIK  N+LL 
Sbjct: 81  LWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT 140

Query: 78  ARGHIKLSDFGL 89
             GH+KL+DFG+
Sbjct: 141 DNGHVKLADFGV 152

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)

Query: 279 AYSTVGTPDYIAPEVFL--QTGYGPAADWWSLGVIMYEML 316
           AYS  GT +Y+APEV      G+  A DWWSLGV+ +E+L
Sbjct: 163 AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELL 202

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 17/40 (42%), Positives = 25/40 (62%)

Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            LA + VGTP Y++PE+     Y   +D WSLG ++YE+ 
Sbjct: 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           NLY++M++  GGD+   +  +      E+    +  +  LA+  +H    +HRDIK  N+
Sbjct: 73  NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 132

Query: 75  LLDARGHIKLSDFGL 89
            L   G IKL DFG+
Sbjct: 133 FLTKDGTIKLGDFGI 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 11  RMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           R    + L L+ E +   D+ T L K  K  L  E  +  + +    +D +H    +HRD
Sbjct: 74  RTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRD 132

Query: 69  IKPDNLLLDARGHIKLSDFGL 89
           +KP N+L+ + G +K++DFGL
Sbjct: 133 LKPQNILVTSDGQVKIADFGL 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 18/32 (56%), Positives = 20/32 (62%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLIVSR 348
           +APEV  + GY  A DWWSLGV  YE L   R
Sbjct: 166 MAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 53.9 bits (129), Expect = 4e-08
 Identities = 20/33 (60%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTPDYIAPE+     YG + DWW+ GV++YEML
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 195

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 53.8 bits (129), Expect = 4e-08
 Identities = 20/33 (60%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTPDYIAPE+     YG + DWW+ GV++YEML
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 195

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 53.5 bits (128), Expect = 4e-08
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 11/101 (10%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L++IME+L GG  + LL K   L E      + E    +D +H    IHRDIK  N+LL 
Sbjct: 77  LWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS 135

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
            +G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 136 EQGDVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 166

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 7   LKQLRMSDPINL-----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA 55
           LK LR  + I+L           Y + E L G D+  LL  +  L ++  Q+++ +    
Sbjct: 63  LKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR-PLEKQFIQYFLYQILRG 120

Query: 56  IDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           +  +H  G +HRD+KP N+L++    +K+ DFGL
Sbjct: 121 LKYVHSAGVVHRDLKPSNILINENCDLKICDFGL 154

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 53.5 bits (128), Expect = 5e-08
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
           + VGTPDYI+PEV    G    YG   DWWS+GV +YEML+    F
Sbjct: 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 53.8 bits (129), Expect = 5e-08
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 280 YSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
           YS  GT +Y+APE+   + G+G A DWWSLG++++E+L     F   G
Sbjct: 164 YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEG 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 53.5 bits (129), Expect = 5e-08
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ E +   D+  L+ K   LS +  Q+++ +    +  IH    +HRD+KP NLLL+ 
Sbjct: 84  YIVQELMET-DLYKLI-KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 141

Query: 79  RGHIKLSDFGL 89
              +K+ DFGL
Sbjct: 142 NCDLKICDFGL 152

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 52.9 bits (127), Expect = 8e-08
 Identities = 17/29 (58%), Positives = 23/29 (79%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPEV L+ GYG   DWW++G+I+YE L+
Sbjct: 183 IAPEVILRQGYGKPVDWWAMGIILYEFLV 211

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 52.3 bits (125), Expect = 8e-08
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 18  LYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L+++ME+  GGD+M  + ++     SE+    +  + +L +  IH    +HRDIK  N+ 
Sbjct: 74  LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIF 133

Query: 76  LDARGHI-KLSDFGLCTGLKKS 96
           L   G + KL DFG+   L  S
Sbjct: 134 LSKNGMVAKLGDFGIARQLNDS 155

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
           + VGTPDYI+PEV    G    YG   DWWS+GV ++EML+    F
Sbjct: 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV  +  Y    DWW LG ++YEML
Sbjct: 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 13  SDPIN-LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
               N LYL  E L   D+  ++     L++   Q +I +    +  IH    +HRD+KP
Sbjct: 75  PGNFNELYLYEE-LMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKP 133

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSH 97
            NLL++A   +K+ DFGL  G  ++ 
Sbjct: 134 GNLLVNADCELKICDFGLARGFSENP 159

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           A+S VGTP Y++PE   + GY   +D WSLG ++YEM
Sbjct: 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 17  NLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + YL+M +     M T L K     LSE+  Q+ + +    +  IH  G IHRD+KP NL
Sbjct: 94  DFYLVMPY-----MQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL 148

Query: 75  LLDARGHIKLSDFGL 89
            ++    +K+ DFGL
Sbjct: 149 AVNEDCELKILDFGL 163

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++   LKQL+  + +NL          +L+ E+     +  L      + E   +  I 
Sbjct: 48  LREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIW 107

Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG 88
           +T  A++  HK   IHRD+KP+N+L+  +G IKL DFG
Sbjct: 108 QTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFG 145

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 52.0 bits (124), Expect = 1e-07
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 11/101 (10%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L++IME+L GG  + LL +   L E      + E    +D +H    IHRDIK  N+LL 
Sbjct: 77  LWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 135

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
             G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 136 EHGEVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 166

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 14/80 (17%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETA-------LAIDSIHKLGFIHRDI 69
            +Y++ME++   D+ +L+   +T+ +    F  +E           +  +H    +HRD+
Sbjct: 80  KIYMVMEYVEH-DLKSLM---ETMKQ---PFLQSEVKCLMLQLLSGVAHLHDNWILHRDL 132

Query: 70  KPDNLLLDARGHIKLSDFGL 89
           K  NLLL+ RG +K+ DFGL
Sbjct: 133 KTSNLLLNNRGILKICDFGL 152

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 20/39 (51%), Positives = 27/39 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F
Sbjct: 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 279 AYSTVGTPDYIAPEVFL--QTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
           AYS  GT +Y+AP++      G+  A DWWS+GV+MYE+L     F   G
Sbjct: 163 AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQF-YIAETALAIDSIHKLGFIHRDIKPDN 73
           L +++E    GD+  ++    K+  L  E T + Y  +   A++ +H    +HRDIKP N
Sbjct: 77  LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPAN 136

Query: 74  LLLDARGHIKLSDFGL 89
           + + A G +KL D GL
Sbjct: 137 VFITATGVVKLGDLGL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +L LIME+LP G +   L + +D ++ +    + ++    +D +    +IHRD+   N+L
Sbjct: 82  SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNIL 141

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           +++   +K+SDFGL   L +    D+Y      +   F Y P C
Sbjct: 142 VESEDLVKISDFGLAKVLPEDK--DYYYVKEPGESPIFWYAPEC 183

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 19/29 (65%), Positives = 24/29 (82%)

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           K G IHRD+KP N+LLDA G++KL DFG+
Sbjct: 133 KHGVIHRDVKPSNILLDASGNVKLCDFGI 161

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 17  NLYLIMEFLPGGDM-MTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            LYL+ EFL   D+ +   M       L     + Y+ +    I   H    +HRD+KP 
Sbjct: 72  KLYLVFEFL---DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQ 128

Query: 73  NLLLDARGHIKLSDFGL 89
           NLL+D  G +KL+DFGL
Sbjct: 129 NLLIDREGALKLADFGL 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 21/83 (25%)

Query: 18  LYLIMEFL-----------PGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIH 66
           LYL+ EFL           P   +   L+K           Y+ +    +   H    +H
Sbjct: 74  LYLVFEFLHQDLKKFMDASPLSGIPLPLIKS----------YLFQLLQGLAFCHSHRVLH 123

Query: 67  RDIKPDNLLLDARGHIKLSDFGL 89
           RD+KP NLL++  G IKL+DFGL
Sbjct: 124 RDLKPQNLLINTEGAIKLADFGL 146

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 20/39 (51%), Positives = 27/39 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F
Sbjct: 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 11/101 (10%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L++IME+L GG  + LL +     E      + E    +D +H    IHRDIK  N+LL 
Sbjct: 77  LWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 135

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
            +G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 136 EQGDVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 166

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 18  LYLIMEFLPGGDMMTL----LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           L+L++E   GG +  L    L + + + E    + + E  + +  +H    IHRD+K +N
Sbjct: 95  LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN 154

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           +LL   G +KL DFG+   L     T   R+ S   P
Sbjct: 155 ILLTTEGGVKLVDFGVSAQLTS---TRLRRNTSVGTP 188

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L++++EF PGG +  ++++ D  L+E   Q    +   A+  +H +  IHRD+K  N+LL
Sbjct: 84  LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL 143

Query: 77  DARGHIKLSDFGL 89
              G IKL+DFG+
Sbjct: 144 TLDGDIKLADFGV 156

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL++++EF  GG +  ++++ +  L+E   +    +T  A++ +H+   IHRD+K  N+L
Sbjct: 76  NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNIL 135

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
               G IKL+DFG+     K+ RT   RD
Sbjct: 136 FTLDGDIKLADFGVSA---KNTRTIQRRD 161

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 50.6 bits (121), Expect = 4e-07
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 39/176 (22%)

Query: 20  LIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + ME +PGG +  LL  K      +E+   FY  +    +  +H    +HRDIK DN+L+
Sbjct: 82  IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLV 141

Query: 77  DA-RGHIKLSDFGLCTGLKKSHR-TDFYRDLSQ--------------AKPSDF------- 113
           +   G +K+SDFG    L   +  T+ +    Q                P+D        
Sbjct: 142 NTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTI 201

Query: 114 -----SYPPFCS-ENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECD 161
                  PPF     PQ    KV  ++      PE+P  +S EA+  I+R C E D
Sbjct: 202 VEMATGKPPFIELGEPQAAMFKVGMFKIH----PEIPESLSAEAKNFILR-CFEPD 252

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV     Y   AD WSLG+   E+ 
Sbjct: 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L++++EF  GG + +++++ +  L+E   ++   +   A++ +H    IHRD+K  N+L
Sbjct: 76  KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNIL 135

Query: 76  LDARGHIKLSDFGLCTGLKK 95
           L   G +KL+DFG+    K 
Sbjct: 136 LTLDGDVKLADFGVSAKNKS 155

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 17/28 (60%), Positives = 22/28 (78%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           IAPEV    G+G A DWW+LG+++YEML
Sbjct: 199 IAPEVISGDGHGSAVDWWTLGILLYEML 226

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 50.4 bits (120), Expect = 6e-07
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV  +  Y    DWW LG ++YEML
Sbjct: 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
            GTP Y+APEV     Y  + DW++LG  +YEM+     F Q  
Sbjct: 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 18  LYLIMEFLPGGDM----MTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI-HRDIKPD 72
           LY++M+ + G  +     +L  KK   +EE       +  LA+  +HK   I HRD+ P+
Sbjct: 84  LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPN 143

Query: 73  NLLLDARGHIKLSDFGL 89
           N++L     + ++DFGL
Sbjct: 144 NIMLGEDDKVTITDFGL 160

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 50.5 bits (120), Expect = 8e-07
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 23  EFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI 82
           EF+  G  +   M +D       +  + +    +  +H++G +HRDIKP+NLL+   G +
Sbjct: 289 EFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQV 348

Query: 83  KLSDFG----LCTGL 93
           K+ DFG    +CTG+
Sbjct: 349 KIIDFGAAVDMCTGI 363

Length = 507

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 50.6 bits (121), Expect = 8e-07
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L+ + E++PG  +  +L     L    T   + +   A+   H  G +HRD+KP N+
Sbjct: 51  PGLLFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNI 110

Query: 75  LLDARG---HIKLSDFGLCTGLKKSHRTD 100
           ++   G   H K+ DFG+ T L      D
Sbjct: 111 MVSQTGVRPHAKVLDFGIGTLLPGVRDAD 139

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 49.6 bits (118), Expect = 9e-07
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+ L  G+G AADWW+LG+ +YE+L+
Sbjct: 195 IAPEILLNVGHGKAADWWTLGIFIYEILV 223

Length = 340

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 49.3 bits (118), Expect = 9e-07
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 280 YSTVGTPDYIAPEVFLQT---GYGPAADWWSLGVIMYEM 315
            S  GTP Y+APEV       G+G AAD WSLG ++ EM
Sbjct: 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM 199

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 49.3 bits (117), Expect = 9e-07
 Identities = 26/72 (36%), Positives = 39/72 (54%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L++ ME+  GG +  +      LSE    +   ET   +  +H  G +HRDIK  N+LL 
Sbjct: 81  LWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT 140

Query: 78  ARGHIKLSDFGL 89
             G +KL+DFG+
Sbjct: 141 DNGDVKLADFGV 152

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 3/36 (8%)

Query: 309 GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           G I Y   +APE+ +++G+G A DWWSLG +MY+ML
Sbjct: 162 GTIEY---MAPEILMRSGHGKAVDWWSLGALMYDML 194

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 17/29 (58%), Positives = 22/29 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           +APEV  +T Y  A DWW LGV++YEML+
Sbjct: 168 LAPEVLTETSYTRAVDWWGLGVLIYEMLV 196

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV  Q+GY   AD WSLG+   E+ 
Sbjct: 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           +A + +GTP Y+APEV+    Y   +D WSLG ++YEM
Sbjct: 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM 194

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           + + MEF+PGG + ++L +   L E     Y  +    +  +H    +HRDIK +N++L 
Sbjct: 77  ISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM 136

Query: 78  ARGHIKLSDFG 88
             G IKL DFG
Sbjct: 137 PNGIIKLIDFG 147

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ E L   D+  ++   D L+ E  QF++ +   A+  IH     HRD+KP N+L 
Sbjct: 78  DIYVVFE-LMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA 136

Query: 77  DARGHIKLSDFGL 89
           +A   +K+ DFGL
Sbjct: 137 NADCKLKICDFGL 149

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 17/103 (16%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-TALAID------SIHKLGFI 65
           ++P   Y+IME + GGD+++ L              + E   + +D       + ++ FI
Sbjct: 71  NEPQ--YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFI 128

Query: 66  HRDIKPDNLLLDARGH-----IKLSDFGLCTGLKKSHRTDFYR 103
           HRD+   N L+  +G+     +K+ DFGL   + KS   D+YR
Sbjct: 129 HRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKS---DYYR 168

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           LYL+ E++   +M+ LL +    +  E  + YI +   AI   HK   +HRDIKP+NLL+
Sbjct: 75  LYLVFEYVEK-NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI 133

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDF 101
                +KL DFG    L +    ++
Sbjct: 134 SHNDVLKLCDFGFARNLSEGSNANY 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 14/103 (13%)

Query: 1   MKDYACLKQLRMSDPIN----------LYLIMEFLPGGDMMTLLM----KKDTLSEECTQ 46
           +K+   LKQL   + I           L +++E    GD+  ++     +K  + E    
Sbjct: 50  VKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVW 109

Query: 47  FYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
            Y  +   A++ +H    +HRDIKP N+ + A G +KL D GL
Sbjct: 110 KYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV  +  Y    DWW LG ++YEML
Sbjct: 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV  +  Y    DWW LG ++YEML
Sbjct: 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S VGTP ++APEV  +  YGP  D WSLG++  EM 
Sbjct: 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ E L   D+  ++    TLS++  Q+++ +    +  IH    +HRD+KP NLLL
Sbjct: 83  DVYIVYE-LMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL 141

Query: 77  DARGHIKLSDFGL 89
           +A   +K+ DFGL
Sbjct: 142 NANCDLKICDFGL 154

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)

Query: 18  LYLIMEFLPGGDMMTLLMK---KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           LY++   +  G     L+K    + L E    F + +   A+D IH  GFIHR +K  ++
Sbjct: 74  LYVVSPLMAYGSC-EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHI 132

Query: 75  LLDARGHIKLSDF 87
           LL   G + LS  
Sbjct: 133 LLSGDGKVVLSGL 145

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 17/31 (54%), Positives = 23/31 (74%)

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
            H+   +HRD+KP NLL+  RG +KL+DFGL
Sbjct: 119 CHQRRVLHRDLKPQNLLISERGELKLADFGL 149

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 18/34 (52%), Positives = 25/34 (73%)

Query: 56  IDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           I   H+   +HRD+KP NLL++ RG +KL+DFGL
Sbjct: 113 IAFCHENRVLHRDLKPQNLLINKRGELKLADFGL 146

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L LIME++P G +   L  K  L+      +  +    +  +H   +IHRD+   N+LLD
Sbjct: 83  LQLIMEYVPLGSLRDYL-PKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD 141

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
               +K+ DFGL   + + H  ++YR         F Y   C
Sbjct: 142 NDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAVEC 181

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL L+ME+LP G +   L K ++ L       Y ++    ++ +    ++HRD+   N+L
Sbjct: 81  NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNIL 140

Query: 76  LDARGHIKLSDFGL 89
           +++   +K+ DFGL
Sbjct: 141 VESENRVKIGDFGL 154

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 15/31 (48%), Positives = 24/31 (77%)

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           +H+   +HRDIK  N+L+D +G +K++DFGL
Sbjct: 131 LHENHILHRDIKAANILIDNQGILKIADFGL 161

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           +APEV    G+  A DWW+LG+++YEML+
Sbjct: 165 LAPEVIQSKGHNKAVDWWALGILIYEMLV 193

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 47.6 bits (113), Expect = 3e-06
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 17  NLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L L+ME   GG +   L  KKD ++       + + ++ +  +    F+HRD+   N+L
Sbjct: 68  ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVL 127

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRD 135
           L  + + K+SDFGL   L       +Y+  S  K     Y P C       +RK  S  D
Sbjct: 128 LVNQHYAKISDFGLSKALGAD--DSYYKARSAGKWPLKWYAPECI-----NFRKFSSRSD 180

Query: 136 TLVF 139
              +
Sbjct: 181 VWSY 184

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 18  LYLIMEFLPGGDMMTL----LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           L+L++E   GG +  L    L+    L E    + +    L +  +H    IHRD+K +N
Sbjct: 99  LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNN 158

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           +LL   G +KL DFG+   L     T   R+ S   P
Sbjct: 159 ILLTTEGGVKLVDFGVSAQLTS---TRLRRNTSVGTP 192

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL+   + G D+  + +K   LS++  QF + +    +  IH  G IHRD+KP N+ ++ 
Sbjct: 96  YLVTHLM-GADLNNI-VKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE 153

Query: 79  RGHIKLSDFGL 89
              +K+ DFGL
Sbjct: 154 DCELKILDFGL 164

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 16/29 (55%), Positives = 22/29 (75%)

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           KL  IHRD+KP N+L++  G +KL DFG+
Sbjct: 122 KLSVIHRDVKPSNVLINRNGQVKLCDFGI 150

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 47.9 bits (114), Expect = 3e-06
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)

Query: 16  INLYLIMEFLPGGDM---MTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
            +LYL+ E+L   D+   M    +     L  +  + ++ +    +   HK G +HRD+K
Sbjct: 79  PSLYLVFEYL-DSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLK 137

Query: 71  PDNLLLD-ARGHIKLSDFGL 89
           P NLL+D  +G +K++D GL
Sbjct: 138 PQNLLVDKQKGLLKIADLGL 157

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 21/39 (53%), Positives = 28/39 (71%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +A S  GTP Y+APE++ +  Y   AD WSLGVI+YE+L
Sbjct: 227 VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELL 265

Length = 478

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 47.9 bits (114), Expect = 3e-06
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA----IDSIHKLGFIHRDIKPD 72
           N+ + MEF+  G +  +  K   +  E     IA   +     + ++H++  +HRDIKP 
Sbjct: 77  NICMCMEFMDCGSLDRIYKKGGPIPVEILG-KIAVAVVEGLTYLYNVHRI--MHRDIKPS 133

Query: 73  NLLLDARGHIKLSDFGL 89
           N+L+++RG IKL DFG+
Sbjct: 134 NILVNSRGQIKLCDFGV 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 13/74 (17%)

Query: 22  MEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAI-------DSIHKLGFIHRDIKPDNL 74
           ME + GG +  +L K   + E      + + ++A+          HK+  +HRD+KP N+
Sbjct: 78  MEHMDGGSLDQVLKKAGRIPEN----ILGKISIAVLRGLTYLREKHKI--MHRDVKPSNI 131

Query: 75  LLDARGHIKLSDFG 88
           L+++RG IKL DFG
Sbjct: 132 LVNSRGEIKLCDFG 145

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D INL  +M+ +   D+  ++ +K  L+E   +  + +    ++ +HK  F+HRD+ P N
Sbjct: 93  DFINL--VMDIM-ASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPAN 149

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           + ++++G  K++DFGL         +D        + 
Sbjct: 150 IFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQR 186

Length = 335

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.4 bits (111), Expect = 5e-06
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 264 SKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEML 316
                     +  AL  ++VGTP Y+APEV L         ++D WSLG+ +YE+L
Sbjct: 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELL 205

Length = 384

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 47.2 bits (112), Expect = 5e-06
 Identities = 18/35 (51%), Positives = 25/35 (71%)

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
           L  +HRD+KP N+L++ RG +KL DFG+ T L  S
Sbjct: 114 LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           S  GTP +++PEV    GYG  AD WS+G  + EML  
Sbjct: 166 SVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTE 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|215917 pfam00433, Pkinase_C, Protein kinase C terminal domain

 Score = 42.6 bits (101), Expect = 6e-06
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 200 QVKSIDDTSNFD-DFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFE 247
           +VKS  DTSNFD +F     ++          I      F  +++   E
Sbjct: 1   KVKSPTDTSNFDPEFTSEPPKLSPPDSEVLSSI--DQLEFRGFSYVNPE 47

Length = 47

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 17  NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +++L+ME+    D+ +LL  M     SE   +  + +    +  +H+   IHRD+K  NL
Sbjct: 82  SIFLVMEYCEQ-DLASLLDNMPT-PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNL 139

Query: 75  LLDARGHIKLSDFGL 89
           LL  +G +K++DFGL
Sbjct: 140 LLTDKGCLKIADFGL 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 46.6 bits (110), Expect = 7e-06
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
           A+S VGTP Y++PE   + GY   +D WSLG ++YEM      F    YG   + +SL
Sbjct: 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKMNLYSL 216

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 46.5 bits (110), Expect = 8e-06
 Identities = 17/29 (58%), Positives = 21/29 (72%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+ L   Y  + DWWS GV++YEMLI
Sbjct: 163 IAPEILLGQKYNTSVDWWSFGVLLYEMLI 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           +  + A + VGTP Y++PE      Y   +D WSLG ++YE+
Sbjct: 162 HDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYEL 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 46.6 bits (110), Expect = 8e-06
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
           A+S VGTP Y++PE   + GY   +D WSLG ++YEM      F    YG   + +SL
Sbjct: 163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKMNLFSL 216

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 46.1 bits (109), Expect = 9e-06
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           LA +  GTP Y++PE     GY   +D WSLG I+YEM
Sbjct: 161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 46.3 bits (110), Expect = 9e-06
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +P+  +++ME  P G++ + L   K +L       Y  + + A+  +    F+HRDI   
Sbjct: 79  NPV--WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAAR 136

Query: 73  NLLLDARGHIKLSDFGL 89
           N+L+ +   +KL DFGL
Sbjct: 137 NVLVSSPDCVKLGDFGL 153

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)

Query: 284 GTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEM 315
           GT +Y+APEV L + GY    D+WSLGV+++EM
Sbjct: 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEM 190

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  + G+  +ADWWS GV+M+EML
Sbjct: 165 MAPEVVNRRGHTQSADWWSFGVLMFEML 192

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 15/27 (55%), Positives = 16/27 (59%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV     YG AAD WSLG  + EM 
Sbjct: 171 APEVIRGEEYGRAADIWSLGCTVIEMA 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 277 ALAYSTVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEM 315
           + A S  G+P ++APEV  Q G YG AAD WSLG  + EM
Sbjct: 156 SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEM 195

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW 333
           N      + VGT  Y++PE      Y  AAD WSLG+ + E  +    FL  G      +
Sbjct: 152 NTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG---QPSF 208

Query: 334 WSL 336
           + L
Sbjct: 209 FEL 211

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           AY+ VGTP YI+PE+     Y   +D W+LG ++YE+ 
Sbjct: 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 14/103 (13%)

Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLM----KKDTLSEECTQ 46
           +K+   LKQL   + I  Y          +++E    GD+  ++     +K  + E+   
Sbjct: 50  IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVW 109

Query: 47  FYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
            Y  +   A++ +H    +HRDIKP N+ + A G +KL D GL
Sbjct: 110 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +Y++ME +PGGD ++ L  KKD L  +    +  + A  +  +     IHRD+   N L+
Sbjct: 67  IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV 126

Query: 77  DARGHIKLSDFGL 89
                +K+SDFG+
Sbjct: 127 GENNVLKISDFGM 139

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 20  LIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           LIMEFLP G +   L + K+ ++ +    Y  +    +D +    ++HRD+   N+L+++
Sbjct: 85  LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES 144

Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
              +K+ DFGL   ++     ++Y          F Y P C
Sbjct: 145 EHQVKIGDFGLTKAIETDK--EYYTVKDDLDSPVFWYAPEC 183

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGF-------IHRDIK 70
           +Y+ ME++  G +  L       +E   +  +     A+  +  L F       IHRD+K
Sbjct: 74  VYMCMEYMDAGSLDKL-YAGGVATEGIPEDVLRRITYAV--VKGLKFLKEEHNIIHRDVK 130

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKS 96
           P N+L++  G +KL DFG+   L  S
Sbjct: 131 PTNVLVNGNGQVKLCDFGVSGNLVAS 156

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +YL+   + G D+  ++ K   LS+E  QF I +    +  IH  G IHRD+KP N+ ++
Sbjct: 95  VYLVTNLM-GADLNNIV-KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN 152

Query: 78  ARGHIKLSDFGL 89
               +++ DFGL
Sbjct: 153 EDCELRILDFGL 164

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)

Query: 27  GGDMMTLLMKKDTLSEECTQF----YIAETALAIDS----IHKLGFIHRDIKPDNLLLDA 78
            G++  LL   D  S E T      ++A+ A  I S    +H+   +HRDIKP NLL+++
Sbjct: 144 NGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS 203

Query: 79  RGHIKLSDFGL 89
             ++K++DFG+
Sbjct: 204 AKNVKIADFGV 214

Length = 353

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 96  DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 153

Query: 77  DARGHIKLSDFGL 89
           +    +K+ DFGL
Sbjct: 154 NEDCELKILDFGL 166

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           A   + +GTP ++APEV  + GY   AD WSLG+   EM
Sbjct: 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEM 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S VGTP ++APEV  +  YG   D WSLG+++ EM+
Sbjct: 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++ + LK L+ ++ + L+          L+ E+L       L    + +S    + ++ 
Sbjct: 51  IREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMF 110

Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           +    +   HK   +HRD+KP NLL++ +G +KL+DFGL
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGL 149

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L L+ME  P G ++  L K+  +     +    + A+ +  +    F+HRD+   N+LL 
Sbjct: 70  LMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV 129

Query: 78  ARGHIKLSDFGL 89
            R   K+SDFG+
Sbjct: 130 NRHQAKISDFGM 141

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 20  LIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+L+
Sbjct: 80  ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILV 137

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           ++RG IKL DFG+   L  S    F    S   P
Sbjct: 138 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 171

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 16/30 (53%), Positives = 22/30 (73%)

Query: 60  HKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           H    +HRD+KP NLL++  G +KL+DFGL
Sbjct: 116 HSHNVLHRDLKPQNLLINKNGELKLADFGL 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           +APEV    G+G A DWW++GV++YE + 
Sbjct: 182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIA 210

Length = 329

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 17/28 (60%), Positives = 22/28 (78%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+ L  GY  A DWW+LGV++YEML
Sbjct: 160 LAPELLLGHGYTKAVDWWTLGVLLYEML 187

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 190

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGT  Y+APEV     Y  + DWW LG ++YEM+
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
           VGT  Y+APEV     Y  + DWW+LG ++YEM+     F Q
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 284 GTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAA 331
           GT  Y+APEV  +   GYG  AD WSLG  + EM      F++ G   AA
Sbjct: 171 GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA 220

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 8/78 (10%)

Query: 18  LYLIMEFLPGGDMMTLLMK--KDTLS----EECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           L LIME+  GGD+   + +  K+ L     E    FY  +  LA+D +H    +HRD+K 
Sbjct: 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFY--QIVLALDEVHSRKMMHRDLKS 197

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+ L   G IKL DFG 
Sbjct: 198 ANIFLMPTGIIKLGDFGF 215

Length = 478

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 11/114 (9%)

Query: 1   MKDYACLKQLRMSDP-INLYLIMEFLPG---GDMMTLLMKKDTLSEECTQFYIAETALAI 56
           +KDY   +  + ++  I L ++MEF+P      M         L     + Y  +   A+
Sbjct: 124 LKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRAL 183

Query: 57  DSIHKLGFIHRDIKPDNLLLDARGH-IKLSDFGLCTGLKKSHR------TDFYR 103
             IH     HRD+KP NLL+D   H +KL DFG    L    R      + FYR
Sbjct: 184 AYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYR 237

Length = 440

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 17/30 (56%), Positives = 24/30 (80%)

Query: 60  HKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           H+   +HRD+KP NLL++ RG +KL+DFGL
Sbjct: 121 HRRKVLHRDLKPQNLLINERGELKLADFGL 150

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 11/78 (14%)

Query: 18  LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +Y++ME +PGG ++T L      +    L +        + A  ++ +     IHRD+  
Sbjct: 67  IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMS-----LDAAAGMEYLESKNCIHRDLAA 121

Query: 72  DNLLLDARGHIKLSDFGL 89
            N L+     +K+SDFG+
Sbjct: 122 RNCLVGENNVLKISDFGM 139

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 100 DVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 156

Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 157 KSDCTLKILDFGL 169

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 17/30 (56%), Positives = 24/30 (80%)

Query: 60  HKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           H+   +HRD+KP NLL++ RG +KL+DFGL
Sbjct: 121 HRRKVLHRDLKPQNLLINERGELKLADFGL 150

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 44.9 bits (106), Expect = 4e-05
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+ L   +GPA DWW+LGV ++E L
Sbjct: 547 LAPELLLGKPHGPAVDWWALGVCLFEFL 574

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 19/90 (21%)

Query: 252 FEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQ-TGYGPAADWWSLGV 310
           F  S S  +  D  R+             + VGTP ++APEV  Q  GY   AD WS G+
Sbjct: 146 FGVSASLADGGDRTRKVR----------KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGI 195

Query: 311 IMYEMLIAPEVFLQTGYGPAADWWSLGVIM 340
              E        L TG  P + +  + V+M
Sbjct: 196 TAIE--------LATGAAPYSKYPPMKVLM 217

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIM 340
           S  GTP ++APEV  ++GYG  +D WS+G  ++EM         TG  P A    L  + 
Sbjct: 167 SMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM--------ATGKPPLASMDRLAAMF 218

Query: 341 Y 341
           Y
Sbjct: 219 Y 219

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 44.2 bits (104), Expect = 4e-05
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           LY++M F  GGD+   L   K   L E     +  + A+A+  +H+   +HRD+K  N+ 
Sbjct: 75  LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVF 134

Query: 76  LDARGHIKLSDFGL 89
           L     IK+ D G+
Sbjct: 135 LTRTNIIKVGDLGI 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 44.7 bits (105), Expect = 4e-05
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI-------HRDIKPD 72
           + ME + GG +  +L +   + EE     + + ++A+  +  L ++       HRD+KP 
Sbjct: 80  ICMEHMDGGSLDQVLKEAKRIPEEI----LGKVSIAV--LRGLAYLREKHQIMHRDVKPS 133

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           N+L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 134 NILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 171

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 10  LRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           +   DP N  ++ME++ G  +      KD + E   +  + E    +  +HK G +H D+
Sbjct: 64  VYDVDPDNKTIVMEYIEGKPL------KDVIEEGNDE-LLREIGRLVGKLHKAGIVHGDL 116

Query: 70  KPDNLLLDARGHIKLSDFGL 89
              N+++     + L DFGL
Sbjct: 117 TTSNIIVRDDK-LYLIDFGL 135

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 44.7 bits (105), Expect = 4e-05
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 96  DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152

Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 153 KSDCTLKILDFGL 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGT  Y+APEV     Y  + D+W LG ++YEM+
Sbjct: 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 44.3 bits (104), Expect = 5e-05
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159

Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 24/70 (34%), Positives = 33/70 (47%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           +L+ME+  G     L + K  L E             +  +H    IHRDIK  N+LL  
Sbjct: 91  WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE 150

Query: 79  RGHIKLSDFG 88
            G +KL+DFG
Sbjct: 151 PGTVKLADFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 43.9 bits (103), Expect = 6e-05
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 43.7 bits (103), Expect = 6e-05
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            A + VGTP Y++PE+     Y   +D W+LGV++YE 
Sbjct: 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYEC 194

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 11/78 (14%)

Query: 18  LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           ++++ E++  G ++  L      +  + L + C+   + E   A++ +   GFIHRD+  
Sbjct: 74  IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSD--VCE---AMEYLESNGFIHRDLAA 128

Query: 72  DNLLLDARGHIKLSDFGL 89
            N L+     +K+SDFGL
Sbjct: 129 RNCLVGEDNVVKVSDFGL 146

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 43.8 bits (103), Expect = 6e-05
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 16/91 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
           LYL +E+ P G+++  L K                  TLS +    + A+ A  +D + +
Sbjct: 83  LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 142

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
             FIHRD+   N+L+      K++DFGL  G
Sbjct: 143 KQFIHRDLAARNILVGENYVAKIADFGLSRG 173

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 43.8 bits (103), Expect = 7e-05
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 6   CLKQLRMSDPINLYLIMEFLPGGDMMTLLM---KKDTLSEECT--QFYIAETALAIDSIH 60
           CL Q     P    L+MEF P GD+   L    K + ++ + T  Q    E AL +  +H
Sbjct: 60  CLGQCTEVTP--YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH 117

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFY 102
           K  FIH D+   N LL A   +K+ D+GL       ++ D+Y
Sbjct: 118 KNNFIHSDLALRNCLLTADLTVKIGDYGLS---HNKYKEDYY 156

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 14/93 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKK-------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           L ++ E  P G ++  L K         TL +   Q      A  +  +    FIHRD+ 
Sbjct: 70  LMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQI-----ANGMRYLESKRFIHRDLA 124

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
             N+LL +   +K+ DFGL   L ++   D Y 
Sbjct: 125 ARNILLASDDKVKIGDFGLMRALPQNE--DHYV 155

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +YL+ME +       + M    L  E   + + +    I  +H  G IHRD+KP N+++ 
Sbjct: 96  VYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 152

Query: 78  ARGHIKLSDFGL 89
           +   +K+ DFGL
Sbjct: 153 SDCTLKILDFGL 164

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 44.1 bits (104), Expect = 7e-05
 Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 44/187 (23%)

Query: 54  LAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTD------------- 100
           LA+  +H    IHRDIK  N+LL + G +KL DFG       +   D             
Sbjct: 154 LAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVA 213

Query: 101 --FYRDLSQAKPSD-FSY-----------PPFCSENPQETYRKVMSWR-DTLVFPPEVPI 145
              +R    +K +D FS             PF  EN +E   K ++ R D L  PP   I
Sbjct: 214 PEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL--PPS--I 269

Query: 146 SEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPA-------AI 197
           S E +E +     S+  RR  S++    L ++  C+ F     + ++ +P         I
Sbjct: 270 SPEMQEIVTALLSSDPKRRPSSSK----LLNMPICKLFISGLLEIVQTQPGFSGPLRDTI 325

Query: 198 PVQVKSI 204
             Q++  
Sbjct: 326 SRQIQQT 332

Length = 496

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 43.4 bits (102), Expect = 8e-05
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           +   LAY+ VGTP Y++PE+     Y    D WSLG ++YE+
Sbjct: 154 DSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 43.7 bits (103), Expect = 9e-05
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           IAPE+     YG + DWW+LGV+M+EM+
Sbjct: 163 IAPEILRGEDYGFSVDWWALGVLMFEMM 190

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 43.4 bits (102), Expect = 9e-05
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGT  Y+APEV     Y  + DWW LG ++YEM+
Sbjct: 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.5 bits (102), Expect = 9e-05
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.7 bits (103), Expect = 9e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFY 102
           AID IH  G IHRDIK +N+L++    I L DFG     + S  T F+
Sbjct: 272 AIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319

Length = 461

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 4/37 (10%)

Query: 309 GVIMYEMLIAPEVFL-QTGYGPAADWWSLGVIMYEML 344
           G I Y   +APE+   + G+G A DWWSLG++++E+L
Sbjct: 168 GTIEY---MAPEIIRGKGGHGKAVDWWSLGILIFELL 201

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           A A + VGTP Y+ PE++    Y   +D WSLG I+YE+
Sbjct: 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYEL 193

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 12/75 (16%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF------------LQT 325
           +A + VGTP Y++PE+     Y   +D W+LG ++YE+L     F            +Q 
Sbjct: 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG 216

Query: 326 GYGPAADWWSLGVIM 340
            Y P    +S  +I 
Sbjct: 217 NYTPVVSVYSSELIS 231

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           LA + +GTP Y++PE+     Y   +D W+LG ++YEM      F
Sbjct: 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAF 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP Y+APE++ +  Y   AD +SLGV++YE+L
Sbjct: 207 GTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239

Length = 496

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 16/34 (47%), Positives = 26/34 (76%)

Query: 56  IDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           +D +H    +HRD+KP+N+L+ + G +KL+DFGL
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQVKLADFGL 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +  L+ME    G +   L K   ++E+     + + ++ +  + +  F+HRD+   N+LL
Sbjct: 69  SWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL 128

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
             + + K+SDFGL   L      ++Y+  +  K     Y P C
Sbjct: 129 VTQHYAKISDFGLSKALGADE--NYYKAKTHGKWPVKWYAPEC 169

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIKP 71
           ++++E + GGD+ + L +     E  +   + +        A     + +  FIHRDI  
Sbjct: 85  FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAA 144

Query: 72  DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
            N LL  +G     K++DFG+    +  +R  +YR
Sbjct: 145 RNCLLTCKGPGRVAKIADFGMA---RDIYRASYYR 176

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 17/35 (48%), Positives = 25/35 (71%)

Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
            +D +H    +HRD+KP N+L+ + G IKL+DFGL
Sbjct: 122 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+     Y  + DWWS GV++YEMLI
Sbjct: 163 IAPEILQGLKYTFSVDWWSFGVLLYEMLI 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S VGTP ++APEV  +T YG   D WSLG+++ EM+
Sbjct: 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMV 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y APE+ L    Y  A D WS+G I  EM+
Sbjct: 164 YRAPEILLGSKHYSTAVDIWSVGCIFAEMI 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  GTP +++PEV    GYG  AD WSLG  + EML
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           IH    +HRD+KP NLL+   G +KL+DFGL
Sbjct: 119 IHGQHILHRDLKPQNLLISYLGELKLADFGL 149

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 16/102 (15%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMK-----------KDTLSEECTQFYIAETALAIDSIHK 61
           SDP  L +I E++  GD+   L +             T+S     F   + A  +  +  
Sbjct: 91  SDP--LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS 148

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
           L F+HRD+   N L+     IK++DFG+   L   +  D+YR
Sbjct: 149 LNFVHRDLATRNCLVGKNYTIKIADFGMSRNL---YSGDYYR 187

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           LY++ EF+  G ++  L  ++  LS++       +    ++ + +  FIHRD+   N L+
Sbjct: 74  LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV 133

Query: 77  DARGHIKLSDFGL 89
            + G +K+SDFG+
Sbjct: 134 SSTGVVKVSDFGM 146

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 19/50 (38%), Positives = 30/50 (60%)

Query: 40  LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L  E  + ++ +    +  IH+   +HRD+KP NLL+   G +KL+DFGL
Sbjct: 100 LHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGL 149

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 19/39 (48%), Positives = 30/39 (76%), Gaps = 3/39 (7%)

Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEML 316
           +++VGT  Y+APEV LQ G  Y  +ADW+SLG +++++L
Sbjct: 153 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLL 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)

Query: 280 YSTVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
           +++VGT  Y+APEV  + T Y  +ADW+SLG +++++L     F Q
Sbjct: 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT 325
           +K   +   S VGT  Y  PE+     YG  AD W+ G I+Y+M      F  T
Sbjct: 163 QKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST 216

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           +N+  +A + +GTP Y++PE+F    Y   +D W+LG  +YEM
Sbjct: 153 ENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEM 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 19  YLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLLL 76
           Y+I EF+  G+++  L + +          Y+A + + A++ + K  FIHRD+   N L+
Sbjct: 78  YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 137

Query: 77  DARGHIKLSDFGL 89
                +K++DFGL
Sbjct: 138 GENHLVKVADFGL 150

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 6   CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTL----SEECTQFYIA-ETALAIDSIH 60
           CL Q   S P    L++EF P GD+   L     +    +++     +A E A  +  +H
Sbjct: 60  CLGQCIESIP--YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH 117

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFY 102
           +  FIH D+   N  L A   +K+ D+GL   L++ +  D+Y
Sbjct: 118 QADFIHSDLALRNCQLTADLSVKIGDYGL--ALEQ-YPEDYY 156

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 8/53 (15%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
            S VGTP ++APEV   +G   A+D WSLG  + E+L        TG  P  D
Sbjct: 157 ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL--------TGNPPYYD 201

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S VGTP ++APEV  +  YG   D WSLG+++ EM+
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
           GTP ++APE+     Y  + D+++LGV +YEM+ A   F   G
Sbjct: 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GT  Y+APE+  +  Y    DW+++G  +YEM+
Sbjct: 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMV 188

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           S V T  Y APEV LQ+ Y    D WS+G I  E+
Sbjct: 165 SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 17/103 (16%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKD------------TLSEECTQFYIAETALAIDSIH 60
            DP  L +I E++  GD+   L +++            ++S     +   + A  +  + 
Sbjct: 89  DDP--LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA 146

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
            L F+HRD+   N L+     IK++DFG+   L   +  D+YR
Sbjct: 147 SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNL---YSGDYYR 186

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEM 315
           VGTP ++APEV  +   Y   AD WSLG+ +YEM
Sbjct: 162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEM 195

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 283 VGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           V T  Y APE+ L   GY    D WS+G I  E+L
Sbjct: 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELL 193

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  GTP +++PEV    GYG  AD WS+G  + EML
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 42.0 bits (98), Expect = 5e-04
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 277 ALAYSTVGTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEM 315
           ++A+S VGTP Y +PE+ L     Y   +D W+LG I+YE+
Sbjct: 196 SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236

Length = 1021

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 12/99 (12%)

Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +K+   L+QL+  + I            +L+ME+  G     L + K  L +E     I 
Sbjct: 69  IKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPL-QEVEIAAIT 127

Query: 51  ETAL-AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG 88
             AL  +  +H    IHRDIK  N+LL   G +KL+DFG
Sbjct: 128 HGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFG 166

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 15/102 (14%)

Query: 13  SDPINLYLIMEFLPGGD-----------MMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
            DP  L +IME++  GD              L     +LS     +   + A  +  +  
Sbjct: 90  VDPP-LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES 148

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
           L F+HRD+   N L+     IK++DFG+   L  S   D+YR
Sbjct: 149 LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSS---DYYR 187

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  +  Y    DWW LG ++YEML
Sbjct: 163 LAPEVLRKQPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           IAPE+     YG + DWW+LGV+M+EM+
Sbjct: 163 IAPEILRGEEYGFSVDWWALGVLMFEMM 190

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           IAPE+     YG + DWW+LGV+M+EM+
Sbjct: 163 IAPEILRGEDYGFSVDWWALGVLMFEMM 190

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 20/73 (27%)

Query: 244 KRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAA 303
           K+ EANS     LS+                R +L     G+  ++APEV  QT Y   A
Sbjct: 154 KKLEANS-----LSTKT-----------NGARPSLQ----GSVFWMAPEVVKQTSYTRKA 193

Query: 304 DWWSLGVIMYEML 316
           D WSLG ++ EML
Sbjct: 194 DIWSLGCLVVEML 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 40.5 bits (96), Expect = 6e-04
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 318 APEVFL-QTGYGPAADWWSLGVIMYEML 344
           APE+ L    Y  A D WS+G I  EM+
Sbjct: 166 APEILLGSKHYSTAVDIWSVGCIFAEMI 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLLL 76
           +Y++ME + GGD +T L  +    +      + E A A ++ +     IHRD+   N L+
Sbjct: 68  IYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV 127

Query: 77  DARGHIKLSDFGL 89
             +  +K+SDFG+
Sbjct: 128 TEKNVLKISDFGM 140

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 16/31 (51%), Positives = 23/31 (74%)

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           +H  G +HRDIKP NLL+++   +K+ DFGL
Sbjct: 119 LHSAGILHRDIKPGNLLVNSNCVLKICDFGL 149

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
              V T  Y APE+      Y P  D W++G I  E+L
Sbjct: 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELL 195

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 29  DMMTLLMKKDTLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF 87
           D+ T + +   L  E     I    L A+  +H  G IHRD+K +N+ LD   +  L DF
Sbjct: 171 DLFTYVDRSGPLPLE-QAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDF 229

Query: 88  G 88
           G
Sbjct: 230 G 230

Length = 392

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTPDY+APE  L      + D ++LGVI+Y+ML
Sbjct: 192 VGTPDYMAPERLLGVPASESTDIYALGVILYQML 225

Length = 932

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 40.5 bits (94), Expect = 8e-04
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLLLD 77
           +L+ME+  G     L + K  L +E     I   AL  +  +H    IHRDIK  N+LL 
Sbjct: 101 WLVMEYCLGSASDLLEVHKKPL-QEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT 159

Query: 78  ARGHIKLSDFG 88
             G +KL+DFG
Sbjct: 160 EPGQVKLADFG 170

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 40.3 bits (94), Expect = 9e-04
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           PI + +I+ F+  GD+ T L+         TL  +    ++ + A  ++ +    FIHRD
Sbjct: 80  PIPM-VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRD 138

Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +   N +L+    + ++DFGL    KK +  D+YR    +K
Sbjct: 139 LAARNCMLNENMTVCVADFGLS---KKIYSGDYYRQGCASK 176

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV  Q+GY   AD WSLG+   E+ 
Sbjct: 166 APEVIKQSGYDEKADIWSLGITAIELA 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  QT Y   AD WSLG ++ EML
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEML 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           VGTP ++APEV  Q+ Y   AD WSLG+   E+
Sbjct: 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 9/76 (11%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           DP    ++ME++ G D+  +L     L  +     + E    +  +HK G +H D+   N
Sbjct: 407 DPEEKTIVMEYIGGKDLKDVLEGNPELVRK-----VGE---IVAKLHKAGIVHGDLTTSN 458

Query: 74  LLLDARGHIKLSDFGL 89
            ++     + L DFGL
Sbjct: 459 FIVR-DDRLYLIDFGL 473

Length = 535

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 18/82 (21%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF---------YIAETALAIDSIHKLGFIHRD 68
           LYL+ E+L       L +KK    +    F         Y+ +    I   H    +HRD
Sbjct: 76  LYLVFEYL------DLDLKKHM--DSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRD 127

Query: 69  IKPDNLLLDARGH-IKLSDFGL 89
           +KP NLL+D R + +KL+DFGL
Sbjct: 128 LKPQNLLIDRRTNALKLADFGL 149

Length = 294

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +Y+I EF+  G ++  L   +   +   +   + A+ A  +  I +  +IHRD++  N+L
Sbjct: 75  IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 134

Query: 76  LDARGHIKLSDFGL 89
           + A    K++DFGL
Sbjct: 135 VSASLVCKIADFGL 148

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 183 RGVDWDHIRER---PAAIPVQVKSIDDTSNFD-DFPDVKLEIPSAPLPQDGEIIYKDWVF 238
           RG+DWD +  +   P  +P ++KS  DTSNFD +F   +      P+        +   F
Sbjct: 1   RGIDWDKLENKEIEPPFVP-KIKSPTDTSNFDPEFT--EETPVLTPVDSPLSGGIQQEPF 57

Query: 239 INYTFKR 245
             +++  
Sbjct: 58  RGFSYVF 64

Length = 64

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  +  Y    DWW LG ++YEML
Sbjct: 163 LAPEVLRKEPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  GTP +++PEV    GYG  AD WS+   + EML
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           LA + VGT  Y+APE      Y   +D WSLG+ + E+
Sbjct: 155 LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIEL 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV LQ+ Y    D WS+G I  E+
Sbjct: 174 APEVLLQSSYATPVDMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           VGTP ++APEV  Q+ Y   AD WSLG+   E+
Sbjct: 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLIVSR 348
           +APE++ +  Y   AD WSLGVI+YE+L + R
Sbjct: 238 LAPELWERKRYSKKADMWSLGVILYELLTLHR 269

Length = 478

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 15/109 (13%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAI--------DSIHK 61
            DP+  Y  M ++ G  + +LL    +K++LS+E  +       L+I        + +H 
Sbjct: 74  GDPV--YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS 131

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
            G +HRD+KPDN+LL   G + + D+G    + K    +   D+   + 
Sbjct: 132 KGVLHRDLKPDNILLGLFGEVVILDWGA--AIFKKLEEEDLLDIDVDER 178

Length = 932

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 20  LIMEFLPGGDMMTLL--MKKDTLSEECTQ----FYIAETALAIDSIHKLGFIHRDIKPDN 73
           +I+ F+  GD+ + L   +   L E+        ++ + AL ++ +    FIHRD+   N
Sbjct: 84  VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARN 143

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
            +L     + ++DFGL    KK +  D+YR    AK
Sbjct: 144 CMLREDMTVCVADFGLS---KKIYSGDYYRQGRIAK 176

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           IH+   +HRD+K  N+L+   G +KL+DFGL
Sbjct: 135 IHRNKILHRDMKAANILITKDGILKLADFGL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 317 IAPEVFL-QTGYGPAADWWSLGVIMYEM 343
           +APEV L + GY    D+WSLGV+++EM
Sbjct: 163 LAPEVLLDEKGYTKHVDFWSLGVLVFEM 190

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 313 YEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           Y M  APEV  +  YGP  D WSLG++  EM 
Sbjct: 181 YWM--APEVIKRKDYGPKVDIWSLGIMCIEMA 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     Y  + DW++LG  +YEM+
Sbjct: 161 MAPEVLQGEVYDFSVDWFALGCTLYEMI 188

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 318 APEVFL-QTGYGPAADWWSLGVIMYEML 344
           APE+ L   GY    D WS+G I  E+L
Sbjct: 166 APELLLGDKGYSTPVDIWSVGCIFAELL 193

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 283 VGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           V T  Y APE+ +  T YG   D W++G IM E+L
Sbjct: 162 VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELL 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +GT  ++APEV     YG + D WS+G ++ EM  A
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           VGTP ++APEV  Q+ Y   AD WSLG+   E+
Sbjct: 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLLLD 77
           +L+ME+  G     L + K  L +E     +   AL  +  +H    IHRD+K  N+LL 
Sbjct: 91  WLVMEYCLGSASDLLEVHKKPL-QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS 149

Query: 78  ARGHIKLSDFG 88
             G +KL DFG
Sbjct: 150 EPGLVKLGDFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +Y++ EF+  G ++  L + D    +  Q     A+ A  +  I ++ +IHRD++  N+L
Sbjct: 75  IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANIL 134

Query: 76  LDARGHIKLSDFGL 89
           +      K++DFGL
Sbjct: 135 VGDNLVCKIADFGL 148

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           Y   GT    APE+  +  YGPA D WS G++++EM
Sbjct: 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEM 276

Length = 391

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 38.3 bits (90), Expect = 0.004
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     Y   AD WSLG+   E+ 
Sbjct: 164 MAPEVINGKPYDYKADIWSLGITAIELA 191

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 38.3 bits (90), Expect = 0.004
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GT DY +PE      Y  + DWW++GV+ YE+L
Sbjct: 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELL 200

Length = 267

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
           Y APE  L  G YGP  D W++G + +E+L
Sbjct: 164 YRAPECLLTDGYYGPKMDIWAVGCVFFEIL 193

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           ++A S VGT  Y++PE    T Y   +D WSLG+ + EM I
Sbjct: 153 SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAI 193

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 6   CLKQLRMSDPINLYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKL 62
           C KQ     PI  Y++ E++  G ++  L    K+   S+           +A     + 
Sbjct: 68  CTKQR----PI--YIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ- 120

Query: 63  GFIHRDIKPDNLLLDARGHIKLSDFGL 89
            FIHRD+   N L+D +G +K+SDFGL
Sbjct: 121 -FIHRDLAARNCLVDDQGCVKVSDFGL 146

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL---GFIHRDIKPDNLL 75
           YL+ME++ G      L +     +E          LA   +H+L      H D+ P N+L
Sbjct: 69  YLLMEWIEG----ETLDEVSEEEKE-DIAEQLAELLA--KLHQLPLLVLCHGDLHPGNIL 121

Query: 76  LDARGHIKLSDFGLC 90
           +D    + + D+   
Sbjct: 122 VDDGKILGIIDWEYA 136

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +Y++ E++  G ++  L   +  + +        A+ A  +  I ++ +IHRD++  N+L
Sbjct: 75  IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 134

Query: 76  LDARGHIKLSDFGL 89
           +      K++DFGL
Sbjct: 135 VGDGLVCKIADFGL 148

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 38.0 bits (88), Expect = 0.004
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           LY++ME +  G+++  L  +        Q   +  + A  ++ +     +HRD+   N+L
Sbjct: 73  LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNIL 132

Query: 76  LDARGHIKLSDFGL 89
           +   G  K+SDFGL
Sbjct: 133 VSEDGVAKVSDFGL 146

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 20  LIMEFLPGGDMMTLLMKK---DTLSEECTQF---YIAETALAIDSIHKLGFIHRDIKPDN 73
           +I+ F+  GD+ + L+     D      TQ    ++ + A  ++ +    FIHRD+   N
Sbjct: 83  VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARN 142

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
            +L+   ++ ++DFGL    KK +  D+YR    AK
Sbjct: 143 CMLNENMNVCVADFGLS---KKIYNGDYYRQGRIAK 175

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	351
KOG0605|consensus	550		100.0
KOG0612|consensus	1317		100.0
KOG0598|consensus	357		100.0
KOG0616|consensus	355		100.0
KOG0608|consensus	1034		100.0
KOG0694|consensus	694		100.0
KOG0614|consensus	732		100.0
KOG0592|consensus	604		100.0
KOG0690|consensus	516		100.0
KOG0610|consensus	459		100.0
KOG0696|consensus	683		100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0986|consensus	591		99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
KOG0595|consensus	429		99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
KOG0695|consensus	593		99.96
KOG0615|consensus	475		99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
KOG0581|consensus	364		99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.95
KOG0603|consensus	612		99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.95
KOG0575|consensus	592		99.95
KOG0583|consensus	370		99.95
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.95
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
KOG0591|consensus	375		99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.94
KOG0599|consensus	411		99.94
KOG0588|consensus	786		99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.93
KOG0611|consensus	668		99.93
KOG0033|consensus	355		99.93
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.93
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.93
KOG0578|consensus	550		99.93
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.92
KOG0580|consensus	281		99.92
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.92
KOG0585|consensus	576		99.92
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.92
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.92
KOG0604|consensus	400		99.91
KOG0589|consensus	426		99.91
KOG0597|consensus	808		99.91
KOG0661|consensus	538		99.9
KOG0032|consensus	382		99.9
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.9
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.9
KOG0192|consensus	362		99.89
KOG4721|consensus	904		99.89
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.89
KOG0600|consensus	560		99.89
KOG0593|consensus	396		99.89
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.88
KOG0582|consensus	516		99.88
PTZ00267	478	NIMA-related protein kinase; Provisional	99.88
KOG0594|consensus	323		99.88
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.88
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.87
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.87
KOG0663|consensus	419		99.87
KOG0198|consensus	313		99.87
KOG4717|consensus	864		99.87
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.87
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.86
KOG0658|consensus	364		99.86
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.86
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.86
KOG0660|consensus	359		99.86
KOG0607|consensus	463		99.86
KOG0201|consensus	467		99.86
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.86
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
PHA03212	391	serine/threonine kinase US3; Provisional	99.85
KOG0667|consensus	586		99.85
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.85
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.85
KOG0659|consensus	318		99.85
KOG0197|consensus	468		99.85
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.85
KOG4645|consensus	1509		99.85
PHA03207	392	serine/threonine kinase US3; Provisional	99.85
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.84
KOG0579|consensus	1187		99.84
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.84
PTZ00284	467	protein kinase; Provisional	99.84
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.84
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.84
PTZ00283	496	serine/threonine protein kinase; Provisional	99.84
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.84
PHA02988	283	hypothetical protein; Provisional	99.84
KOG0586|consensus	596		99.84
KOG0603|consensus	612		99.83
KOG4236|consensus	888		99.83
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.83
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.83
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.83
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.83
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.83
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.83
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.82
KOG0574|consensus	502		99.82
PHA03209	357	serine/threonine kinase US3; Provisional	99.82
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.82
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.82
KOG0596|consensus	677		99.82
KOG4250|consensus	732		99.82
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.82
KOG1187|consensus	361		99.82
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.82
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.82
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.81
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.81
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.81
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.81
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.81
PHA03211	461	serine/threonine kinase US3; Provisional	99.81
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.81
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.81
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.81
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.81
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.81
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.81
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.81
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.81
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.81
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.81
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.8
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.8
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.8
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.8
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.8
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.8
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.8
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.8
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.8
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.8
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.8
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.8
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.8
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.8
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.8
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.8
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.8
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.8
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.8
PHA03210	501	serine/threonine kinase US3; Provisional	99.8
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.79
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.79
PTZ00036	440	glycogen synthase kinase; Provisional	99.79
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.79
KOG1035|consensus	1351		99.79
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.79
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.79
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.79
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.79
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.79
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.79
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.79
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.79
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.79
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.79
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.79
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.79
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.79
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.79
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.79
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.79
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.79
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.79
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.79
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.79
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.79
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.79
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.79
KOG0577|consensus	948		99.79
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.79
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.78
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.78
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.78
KOG0587|consensus	953		99.78
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.78
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.78
KOG0193|consensus	678		99.78
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.78
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.78
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.78
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.78
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.78
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.78
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.78
KOG4279|consensus	1226		99.78
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.78
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.78
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.78
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.78
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.77
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.77
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.77
PHA02882	294	putative serine/threonine kinase; Provisional	99.77
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.77
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.77
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.77
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.77
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.77
KOG0984|consensus	282		99.77
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.77
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.77
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.77
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.77
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.77
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.77
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.77
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.77
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.77
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.77
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.77
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.77
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.76
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.76
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.76
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.76
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.76
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.76
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.76
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.76
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.76
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.76
KOG0666|consensus	438		99.76
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.76
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.76
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.76
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.76
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.76
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.76
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.76
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.76
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.76
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.75
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.75
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.75
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.75
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.75
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.75
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.75
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.75
KOG0665|consensus	369		99.75
KOG0194|consensus	474		99.75
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.75
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.75
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.75
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.75
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.75
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.75
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.75
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.75
PLN00181	793	protein SPA1-RELATED; Provisional	99.75
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.75
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.75
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.74
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.74
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.74
KOG1152|consensus	772		99.74
KOG1989|consensus	738		99.74
KOG0669|consensus	376		99.74
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.74
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.74
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.74
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.74
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.74
KOG0606|consensus	1205		99.73
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.73
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.73
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.73
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.73
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.73
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.73
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.73
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.72
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.72
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.72
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.72
KOG1151|consensus	775		99.72
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.72
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.72
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.72
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.72
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.72
KOG0584|consensus	632		99.72
KOG0664|consensus	449		99.72
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.72
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.71
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.71
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.71
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.71
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.71
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.71
PLN00009	294	cyclin-dependent kinase A; Provisional	99.71
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.71
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.71
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.71
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.7
KOG0671|consensus	415		99.7
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.7
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.7
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.7
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.7
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.7
KOG0662|consensus	292		99.7
KOG1167|consensus	418		99.69
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.69
KOG2345|consensus	302		99.69
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.69
KOG1095|consensus	1025		99.69
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.69
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.69
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.69
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.68
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.68
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.68
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.68
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.68
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.67
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.67
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.67
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.67
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.67
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.67
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.66
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.66
KOG0983|consensus	391		99.66
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.66
KOG1026|consensus	774		99.66
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.66
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.65
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.65
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.65
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.65
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.65
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.65
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.65
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.64
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.64
KOG1027|consensus	903		99.62
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.62
KOG1006|consensus	361		99.62
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.62
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.61
KOG0668|consensus	338		99.61
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.61
KOG2052|consensus	513		99.6
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.59
KOG1094|consensus	807		99.59
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.58
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.58
KOG0670|consensus	752		99.58
KOG0196|consensus	996		99.57
KOG0576|consensus	829		99.57
KOG3653|consensus	534		99.57
KOG1290|consensus	590		99.54
KOG4278|consensus	1157		99.54
KOG0200|consensus	609		99.54
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.53
KOG4257|consensus	974		99.53
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.52
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.51
KOG1345|consensus	378		99.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.49
KOG0199|consensus	1039		99.49
KOG0590|consensus	601		99.46
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.42
PRK09188	365	serine/threonine protein kinase; Provisional	99.4
KOG0606|consensus	1205		99.34
PRK12274	218	serine/threonine protein kinase; Provisional	99.33
KOG1025|consensus	1177		99.32
PRK10345	210	hypothetical protein; Provisional	99.31
smart00090	237	RIO RIO-like kinase.	99.3
KOG1164|consensus	322		99.27
PRK14879	211	serine/threonine protein kinase; Provisional	99.23
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.2
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.2
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.19
KOG1033|consensus	516		99.19
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.15
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.14
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.07
KOG1024|consensus	563		99.06
KOG1166|consensus	974		99.01
KOG0605|consensus	550		98.99
KOG1165|consensus	449		98.98
KOG1163|consensus	341		98.96
KOG1240|consensus	1431		98.95
KOG4158|consensus	598		98.93
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.84
KOG0590|consensus	601		98.79
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.79
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.64
KOG0598|consensus	357		98.6
KOG0694|consensus	694		98.57
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.57
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.57
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.56
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.53
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.52
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.52
KOG0610|consensus	459		98.47
KOG0616|consensus	355		98.45
KOG1023|consensus	484		98.43
KOG3087|consensus	229		98.35
KOG0612|consensus	1317		98.31
KOG0986|consensus	591		98.27
KOG0696|consensus	683		98.18
KOG0575|consensus	592		98.16
KOG0695|consensus	593		98.05
KOG0690|consensus	516		98.04
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	97.99
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.98
KOG0608|consensus	1034		97.98
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	97.96
KOG0614|consensus	732		97.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	97.93
KOG0592|consensus	604		97.9
KOG4717|consensus	864		97.86
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.85
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.81
KOG0667|consensus	586		97.8
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	97.8
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.76
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	97.75
KOG0583|consensus	370		97.73
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	97.72
KOG0591|consensus	375		97.72
KOG0033|consensus	355		97.72
KOG0615|consensus	475		97.7
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	97.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.65
KOG0032|consensus	382		97.61
KOG0589|consensus	426		97.58
KOG4721|consensus	904		97.58
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	97.57
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	97.55
PRK09902	216	hypothetical protein; Provisional	97.55
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	97.52
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	97.49
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	97.47
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	97.47
KOG0599|consensus	411		97.46
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	97.46
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	97.46
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	97.46
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	97.45
KOG0201|consensus	467		97.45
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	97.45
PTZ00263	329	protein kinase A catalytic subunit; Provisional	97.44
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	97.43
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	97.42
KOG0601|consensus	524		97.41
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	97.41
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	97.41
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	97.41
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	97.41
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	97.4

>KOG0605|consensus

Probab=100.00  E-value=4.9e-51  Score=392.71  Aligned_cols=248  Identities=53%  Similarity=0.903  Sum_probs=213.0

Q ss_pred             CCceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          2 KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         2 ~~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++.+.+|++|||.++|||||||++|||+..+|.+.+.|+|..+++|++++++|++.+|+.|+|||||||+|+|||..||
T Consensus       200 s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH  279 (550)
T KOG0605|consen  200 SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH  279 (550)
T ss_pred             CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC
Confidence            36889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCccc-------------------------------------------------cccc--------
Q psy17600         82 IKLSDFGLCTGLKKSHRTD-------------------------------------------------FYRD--------  104 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~-------------------------------------------------~~~~--------  104 (351)
                      +||+|||||+.+....+.+                                                 +.++        
T Consensus       280 iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEV  359 (550)
T KOG0605|consen  280 IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEV  359 (550)
T ss_pred             EeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHH
Confidence            9999999997543211000                                                 0011        


Q ss_pred             ---CCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCC
Q psy17600        105 ---LSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARG  169 (351)
Q Consensus       105 ---~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~  169 (351)
                         .+|+..+|||            ||||+++++.+++++|++|+..+.||....+|++|+|||.+|+.+|..||| .+|
T Consensus       360 ll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~RLG-~~G  438 (550)
T KOG0605|consen  360 LLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLCDPENRLG-SKG  438 (550)
T ss_pred             HhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhcCHHHhcC-ccc
Confidence               2344556665            899999999999999999999999999999999999999998889999999 779


Q ss_pred             hHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCCCCC--Cccc-------cccCccccc
Q psy17600        170 VEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQ--DGEI-------IYKDWVFIN  240 (351)
Q Consensus       170 ~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~  240 (351)
                      +++||   +||||++|||+.|+++++|++|++.++.|++|||+|++.+...+......  ....       ..++..|.|
T Consensus       439 ~~EIK---~HPfF~~v~W~~l~~~~apfvP~v~~~~DT~yFddF~e~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~Fvg  515 (550)
T KOG0605|consen  439 AEEIK---KHPFFKGVDWDHLREMPAPFVPQVNSELDTQYFDDFPEEDSMTPTADKSGPSRKMLSMVDTNNSSKDINFVG  515 (550)
T ss_pred             HHHHh---cCCccccCCcchhhcCCCCCCCCCCCcccccccccCcccccCcccccccccchhhhhcccccCCcccccccc
Confidence            99999   88999999999999999999999999999999999998776555543321  1222       245566999


Q ss_pred             ccccccccCCCcc
Q psy17600        241 YTFKRFEANSPFE  253 (351)
Q Consensus       241 ~~~~~~~~~~~~~  253 (351)
                      |||+.++......
T Consensus       516 fTyk~~~~~~~~~  528 (550)
T KOG0605|consen  516 FTYKNFDGLNKAN  528 (550)
T ss_pred             eeeeccccccccc
Confidence            9999988866543

>KOG0612|consensus

Probab=100.00  E-value=4.7e-44  Score=366.98  Aligned_cols=240  Identities=39%  Similarity=0.691  Sum_probs=206.8

Q ss_pred             CCceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          2 KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         2 ~~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++++-+++.|||..+||+||||++||||..++.+.+.++|..|+||+++|+.||.-+|+.|.|||||||+|||+|..||
T Consensus       134 s~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH  213 (1317)
T KOG0612|consen  134 SEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH  213 (1317)
T ss_pred             cHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc
Confidence            35778899999999999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCC--------cc-ccc----------ccCCCCCCcccC------------CCCCCCCCHHHHHHHH
Q psy17600         82 IKLSDFGLCTGLKKSH--------RT-DFY----------RDLSQAKPSDFS------------YPPFCSENPQETYRKV  130 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~--------~~-~~~----------~~~~~~~~~~~~------------~~Pf~~~~~~~~~~~i  130 (351)
                      +||+|||.|-.+....        +| ++.          ....|+..+|||            .+||+.++..++|.+|
T Consensus       214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KI  293 (1317)
T KOG0612|consen  214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKI  293 (1317)
T ss_pred             EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence            9999999987654221        12 221          124567778887            5899999999999999


Q ss_pred             HcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCC
Q psy17600        131 MSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF  210 (351)
Q Consensus       131 ~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f  210 (351)
                      ++++..+.||....+|++|+|||.+|+.+++.|||- +|.++|+   .||||.|+||+.|++..||+.|.+.|.+|++||
T Consensus       294 m~hk~~l~FP~~~~VSeeakdLI~~ll~~~e~RLgr-ngiedik---~HpFF~g~~W~~iR~~~pP~vPevssd~DTsnF  369 (1317)
T KOG0612|consen  294 MNHKESLSFPDETDVSEEAKDLIEALLCDREVRLGR-NGIEDIK---NHPFFEGIDWDNIRESVPPVVPEVSSDDDTSNF  369 (1317)
T ss_pred             hchhhhcCCCcccccCHHHHHHHHHHhcChhhhccc-ccHHHHH---hCccccCCChhhhhhcCCCCCCcCCCCCccccc
Confidence            999999999988889999999999999999999994 5899999   899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCcccccccccc
Q psy17600        211 DDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKR  245 (351)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (351)
                      |...+........++.....+.+.+..|+||+|.+
T Consensus       370 d~~~dd~~~~e~~p~~~~~~f~Gn~LPFIGfTy~~  404 (1317)
T KOG0612|consen  370 DVDEDDLRDAETFPPRIPKAFSGNHLPFIGFTYTH  404 (1317)
T ss_pred             cccccccchhhccCCCCCCCCcCCcCCeeeeeecc
Confidence            65444333322233333445667888999999997

>KOG0598|consensus

Probab=100.00  E-value=2.9e-43  Score=326.65  Aligned_cols=209  Identities=35%  Similarity=0.679  Sum_probs=178.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |+|.++++|||..++|||+||+.||+|+.+|.+++.|+|..+++|+++|++||.|||++|||||||||||||+|.+||++
T Consensus        86 Fiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~  165 (357)
T KOG0598|consen   86 FIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIK  165 (357)
T ss_pred             cEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEE
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccC-cCCCccc-cccc-----------CCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGL-KKSHRTD-FYRD-----------LSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~-~~~~~~~-~~~~-----------~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||||+.. ..+..+. ++++           .++...+|||            .+||.+++..+++++|...+  +.
T Consensus       166 LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k--~~  243 (357)
T KOG0598|consen  166 LTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK--LP  243 (357)
T ss_pred             EeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc--CC
Confidence            9999999843 3322222 3333           3556667886            69999999999999999743  34


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCC--CcccCCCCcCCCCCC-CC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAI--PVQVKSIDDTSNFDD-FP  214 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~--~~~~~~~~d~~~f~~-~~  214 (351)
                      +|+. .+|++++|+|++|+ ++|++|||+..++++|+   .||||+++||+.|.++...+  .|.+.+..|++|||. |+
T Consensus       244 ~~p~-~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik---~HpfF~~inW~~l~~k~l~PpF~P~~~~~~~~~~Fd~eft  319 (357)
T KOG0598|consen  244 LPPG-YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIK---RHPFFKGINWEKLLAKKLSPPFKPNVTGLEDTSNFDNEFT  319 (357)
T ss_pred             CCCc-cCCHHHHHHHHHHhccCHHHhcCCCCChHHhh---cCcccccCCHHHHHhcCCCCCeecCCCCccccccccHHHH
Confidence            4443 38999999999965 79999999777888877   89999999999998875554  457889999999985 55


Q ss_pred             CCCC
Q psy17600        215 DVKL  218 (351)
Q Consensus       215 ~~~~  218 (351)
                      ....
T Consensus       320 ~~~~  323 (357)
T KOG0598|consen  320 SYTV  323 (357)
T ss_pred             hccc
Confidence            5443

>KOG0616|consensus

Probab=100.00  E-value=3.4e-43  Score=317.28  Aligned_cols=207  Identities=35%  Similarity=0.695  Sum_probs=182.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |.+.++.+|+|..++||||||++||+|++++++.+.|++..+++|++||++|++|||+++|++|||||||||+|.+|++|
T Consensus       105 Flv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iK  184 (355)
T KOG0616|consen  105 FLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIK  184 (355)
T ss_pred             eeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEE
Confidence            67788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcccccc-----------cCCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCC
Q psy17600         84 LSDFGLCTGLKKSHRTDFYR-----------DLSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFP  140 (351)
Q Consensus        84 l~DFGla~~~~~~~~~~~~~-----------~~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p  140 (351)
                      |+|||+|+.+.... ...++           ..++++..|||            +|||.+.++.++|++|+.  +.+.||
T Consensus       185 itDFGFAK~v~~rT-~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~--~~v~fP  261 (355)
T KOG0616|consen  185 ITDFGFAKRVSGRT-WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE--GKVKFP  261 (355)
T ss_pred             EEeccceEEecCcE-EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh--CcccCC
Confidence            99999999876542 12222           34566777885            899999999999999997  578999


Q ss_pred             CCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCC---CcccCCCCcCCCCCCCCC
Q psy17600        141 PEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAI---PVQVKSIDDTSNFDDFPD  215 (351)
Q Consensus       141 ~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~---~~~~~~~~d~~~f~~~~~  215 (351)
                      ..  +|++++|||++|+ +|-.+|+|+. +|.++|+   .||||++++|+++.++...+   ||.+....|++|||++.+
T Consensus       262 ~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk---~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e  336 (355)
T KOG0616|consen  262 SY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIK---NHPWFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEE  336 (355)
T ss_pred             cc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccc---cCcccccccHHHHhhccccCCCCCccccCCccccccccccc
Confidence            87  8999999999965 7889999985 5988988   89999999999998885433   347889999999999887


Q ss_pred             CCC
Q psy17600        216 VKL  218 (351)
Q Consensus       216 ~~~  218 (351)
                      .+.
T Consensus       337 ~~~  339 (355)
T KOG0616|consen  337 EDT  339 (355)
T ss_pred             ccc
Confidence            653

>KOG0608|consensus

Probab=100.00  E-value=9.2e-43  Score=339.48  Aligned_cols=242  Identities=40%  Similarity=0.754  Sum_probs=203.8

Q ss_pred             CCceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          2 KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         2 ~~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++.|.+|++|||.++||+||||++|||+..+|.+.+.|+|..++||++++.+|+++.|..|+|||||||+|||||.+|+
T Consensus       688 n~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH  767 (1034)
T KOG0608|consen  688 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH  767 (1034)
T ss_pred             CcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCccccc-------------------------------------------------------ccCC
Q psy17600         82 IKLSDFGLCTGLKKSHRTDFY-------------------------------------------------------RDLS  106 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~~~-------------------------------------------------------~~~~  106 (351)
                      +||+|||||.++...+...+|                                                       ...+
T Consensus       768 IKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g  847 (1034)
T KOG0608|consen  768 IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG  847 (1034)
T ss_pred             eeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC
Confidence            999999999876432111111                                                       1123


Q ss_pred             CCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHh
Q psy17600        107 QAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELK  174 (351)
Q Consensus       107 ~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~  174 (351)
                      +...+|||            .+||...++-++..+|.+|+..+.||....+|++|.++|.+||.+++.|||. .|++++|
T Consensus       848 ~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGk-ng~d~vK  926 (1034)
T KOG0608|consen  848 YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGK-NGADQVK  926 (1034)
T ss_pred             ccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhhhcc-cchhhhh
Confidence            34445665            6999999999999999999999999999999999999999999999999996 4777788


Q ss_pred             cCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCCCCCCccccccC--cccccccccccc
Q psy17600        175 SLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKD--WVFINYTFKRFE  247 (351)
Q Consensus       175 ~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  247 (351)
                         +||||++|||..|++.+++..|.+....|++|||.+...++-+...-.+...+.+.+.  -.|..|+|.+|=
T Consensus       927 ---aHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFdpvdpeklwnddses~~~~~~~nkhpehaFyEFTfRrFF  998 (1034)
T KOG0608|consen  927 ---AHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFDPVDPEKLWNDDSESPNVRDTLNKHPEHAFYEFTFRRFF  998 (1034)
T ss_pred             ---cCccccccchHhhhhccCCcCccccCCCccccCCcCCccccccccccCCCcccccccCCccceeEeeeehhc
Confidence               9999999999999999999999999999999999987766544433333333333322  457777877653

>KOG0694|consensus

Probab=100.00  E-value=1.5e-40  Score=328.03  Aligned_cols=207  Identities=34%  Similarity=0.632  Sum_probs=177.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |.+.++.+||+..++|+||||+.|||+..+ .+.+.|++..+++|+++|++||+|||.+||||||||.+|||+|.+|++|
T Consensus       430 FL~~L~~~fQT~~~l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~k  508 (694)
T KOG0694|consen  430 FLVNLFSCFQTKEHLFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVK  508 (694)
T ss_pred             eEeecccccccCCeEEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEE
Confidence            678899999999999999999999995544 4557899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCc-CCCcc-cccccC-----------CCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLK-KSHRT-DFYRDL-----------SQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~-~~~~~-~~~~~~-----------~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+||... .+.+| ++++++           .|...+|||            .+||.|++..+++..|++  +.+.
T Consensus       509 iADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--d~~~  586 (694)
T KOG0694|consen  509 IADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--DEVR  586 (694)
T ss_pred             ecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CCCC
Confidence            99999998643 34333 444444           345567776            699999999999999997  7889


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC-C
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD-F  213 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~-~  213 (351)
                      ||..  +|.++.+++++|+ ++|++|||+. +++++|+   .||||+.|||++|.++.  ||+.|.+++..|.+|||+ |
T Consensus       587 yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~---~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~eF  661 (694)
T KOG0694|consen  587 YPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIK---KHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDEEF  661 (694)
T ss_pred             CCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhh---hCCccccCCHHHHhhccCCCCCCcccCChhhhcccchhh
Confidence            9976  8999999999955 8999999984 6788888   89999999999998885  555678999999999985 7


Q ss_pred             CCCCC
Q psy17600        214 PDVKL  218 (351)
Q Consensus       214 ~~~~~  218 (351)
                      +..+.
T Consensus       662 t~e~p  666 (694)
T KOG0694|consen  662 TSEKP  666 (694)
T ss_pred             hcCCC
Confidence            76543

>KOG0614|consensus

Probab=100.00  E-value=2.4e-39  Score=309.33  Aligned_cols=215  Identities=33%  Similarity=0.610  Sum_probs=192.3

Q ss_pred             CCceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          2 KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         2 ~~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+|+|.+|.+|.|...+|+.||-|-||+|...|++++.|++..+++|++.++.|++|||++|||+|||||+|++++.+|+
T Consensus       479 s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy  558 (732)
T KOG0614|consen  479 SDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY  558 (732)
T ss_pred             chHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCcccc-cccCCCCCC-----------cccC------------CCCCCCCCHHHHHHHHHcCCCce
Q psy17600         82 IKLSDFGLCTGLKKSHRTDF-YRDLSQAKP-----------SDFS------------YPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~~-~~~~~~~~~-----------~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      +||.|||+|+.+..+.+|.. ++++.|..|           .|+|            .|||.+.++..+|+.|+.+.+.+
T Consensus       559 ~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i  638 (732)
T KOG0614|consen  559 LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI  638 (732)
T ss_pred             eEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh
Confidence            99999999999988877754 445555444           3333            79999999999999999999999


Q ss_pred             eCCCCCCCCHHHHHHHHHHhc-CccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCC--cccCCCCcCCCCCCC
Q psy17600        138 VFPPEVPISEEARETIVRFCS-ECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIP--VQVKSIDDTSNFDDF  213 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l~~-~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~--~~~~~~~d~~~f~~~  213 (351)
                      .||..  ++..|.++|++||+ +|.+|||+. .|..+|+   .|.||.+.||+.|+.+..++|  +.+.+..|++|||.|
T Consensus       639 ~~Pr~--I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIk---kH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~  713 (732)
T KOG0614|consen  639 EFPRR--ITKTATDLIKKLCRDNPTERLGYQKGGINDIK---KHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNF  713 (732)
T ss_pred             hcccc--cchhHHHHHHHHHhcCcHhhhccccCChHHHH---hhhhhhcCChhhhhhccCCCCccccCCCcccchhccCC
Confidence            99976  88999999999995 799999974 6777887   889999999999998866555  578999999999999


Q ss_pred             CCCCCCCC
Q psy17600        214 PDVKLEIP  221 (351)
Q Consensus       214 ~~~~~~~~  221 (351)
                      +..+...|
T Consensus       714 p~dnd~pp  721 (732)
T KOG0614|consen  714 PPDNDEPP  721 (732)
T ss_pred             CcccCCCC
Confidence            98766554

>KOG0592|consensus

Probab=100.00  E-value=2.9e-37  Score=297.64  Aligned_cols=182  Identities=34%  Similarity=0.653  Sum_probs=155.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .++.+|++|||..+||+|+||+++|||.++|++.+.|++.++++|++||+.||+|||++|||||||||||||++.+|++|
T Consensus       135 givkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhik  214 (604)
T KOG0592|consen  135 GIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIK  214 (604)
T ss_pred             CeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEE
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc---------------ccccccCCCCC-----------Cccc------------CCCCCCCCCHHH
Q psy17600         84 LSDFGLCTGLKKSHR---------------TDFYRDLSQAK-----------PSDF------------SYPPFCSENPQE  125 (351)
Q Consensus        84 l~DFGla~~~~~~~~---------------~~~~~~~~~~~-----------~~~~------------~~~Pf~~~~~~~  125 (351)
                      |+|||.|+.+.....               ..+.++..|..           ..|.            +.|||.+.|..-
T Consensus       215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl  294 (604)
T KOG0592|consen  215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL  294 (604)
T ss_pred             EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence            999999987653221               22333333322           2333            279999999999


Q ss_pred             HHHHHHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCC
Q psy17600        126 TYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAA  196 (351)
Q Consensus       126 ~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~  196 (351)
                      +|++|+.  -.+.||+.  +++.++|||++| ..+|..|++.    ++|+   +||||++|||+.|.+.++|
T Consensus       295 iFqkI~~--l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt~----~qIk---~HpFF~~Vdw~nlw~~~PP  355 (604)
T KOG0592|consen  295 IFQKIQA--LDYEFPEG--FPEDARDLIKKLLVRDPSDRLTS----QQIK---AHPFFEGVDWENLWQQTPP  355 (604)
T ss_pred             HHHHHHH--hcccCCCC--CCHHHHHHHHHHHccCccccccH----HHHh---hCcccccCChhhhhhcCCC
Confidence            9999997  45778876  679999999995 4799999985    5666   9999999999999877655

>KOG0690|consensus

Probab=100.00  E-value=3.9e-38  Score=287.53  Aligned_cols=209  Identities=29%  Similarity=0.534  Sum_probs=177.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |...+.++||+.+++++||||+.||+|+.+|.+...|+|..+++|-++|++||.|||+++||+||||.+|+|+|.+|++|
T Consensus       229 FLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIK  308 (516)
T KOG0690|consen  229 FLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIK  308 (516)
T ss_pred             HHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceE
Confidence            45567889999999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc-CcCCCc-ccccccCCC-----------CCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTG-LKKSHR-TDFYRDLSQ-----------AKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~-~~~~~~-~~~~~~~~~-----------~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+. +..+.. ..+++++.|           +...|||            ..||+..+...+|+-|+.  ..+.
T Consensus       309 itDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~--ed~k  386 (516)
T KOG0690|consen  309 ITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM--EDLK  386 (516)
T ss_pred             eeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh--hhcc
Confidence            999999985 333332 234554444           3445564            689999999999999997  6789


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC--CCCCCcccCCCCcCCCCCC-CC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDD-FP  214 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~--~~~~~~~~~~~~d~~~f~~-~~  214 (351)
                      ||..  +|++|+.|+..|+ ++|.+|||++  .++++++..|+||++|||+++..+  .||+.|++.+..|++.||+ |+
T Consensus       387 FPr~--ls~eAktLLsGLL~kdP~kRLGgG--pdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT  462 (516)
T KOG0690|consen  387 FPRT--LSPEAKTLLSGLLKKDPKKRLGGG--PDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFT  462 (516)
T ss_pred             CCcc--CCHHHHHHHHHHhhcChHhhcCCC--chhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchhhhhhhhh
Confidence            9986  8999999999955 8999999973  455666669999999999999666  5666678999999999985 77


Q ss_pred             CCCC
Q psy17600        215 DVKL  218 (351)
Q Consensus       215 ~~~~  218 (351)
                      ....
T Consensus       463 ~q~v  466 (516)
T KOG0690|consen  463 SQPV  466 (516)
T ss_pred             ccee
Confidence            6543

>KOG0610|consensus

Probab=100.00  E-value=7.5e-36  Score=280.13  Aligned_cols=191  Identities=35%  Similarity=0.584  Sum_probs=159.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      |..-+|..|++++.+|+|||||+||||..+++++  ..|+++.+++|+++++.||+|||-.|||+|||||||||+.++||
T Consensus       138 FlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH  217 (459)
T KOG0610|consen  138 FLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH  217 (459)
T ss_pred             ccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc
Confidence            4456788999999999999999999999988764  57999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcC---------------------------------CCcc-------------------------cc--
Q psy17600         82 IKLSDFGLCTGLKK---------------------------------SHRT-------------------------DF--  101 (351)
Q Consensus        82 ~kl~DFGla~~~~~---------------------------------~~~~-------------------------~~--  101 (351)
                      +.|+||.|+.....                                 ....                         .+  
T Consensus       218 IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVG  297 (459)
T KOG0610|consen  218 IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVG  297 (459)
T ss_pred             EEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccc
Confidence            99999998653210                                 0000                         00  


Q ss_pred             ---------cccCCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHH-hcC
Q psy17600        102 ---------YRDLSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSE  159 (351)
Q Consensus       102 ---------~~~~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~  159 (351)
                               ..+.+++..+|||            .+||.|.+..+++.+|+.  ..+.||....+|-.|+|||++| .+|
T Consensus       298 ThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~--~~l~Fp~~~~vs~~akDLIr~LLvKd  375 (459)
T KOG0610|consen  298 THEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG--QPLKFPEEPEVSSAAKDLIRKLLVKD  375 (459)
T ss_pred             ccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc--CCCcCCCCCcchhHHHHHHHHHhccC
Confidence                     0112334456665            699999999999999996  6789999988999999999995 589


Q ss_pred             ccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        160 CDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       160 ~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                      |++|||+.+|+.|||   .||||+|+||.-++...||..|
T Consensus       376 P~kRlg~~rGA~eIK---~HpFF~gVnWaLir~~~PP~iP  412 (459)
T KOG0610|consen  376 PSKRLGSKRGAAEIK---RHPFFEGVNWALIRCARPPEIP  412 (459)
T ss_pred             hhhhhccccchHHhh---cCccccCCChhheeccCCCcCC
Confidence            999999999999999   8899999999966666555433

>KOG0696|consensus

Probab=100.00  E-value=5.6e-36  Score=280.48  Aligned_cols=205  Identities=30%  Similarity=0.572  Sum_probs=174.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |.+-++-.||+.++||+||||+.||||..++++-+.+.|..|.+|+++|+.||-+||++|||+||||.+|++++.+|++|
T Consensus       411 FL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiK  490 (683)
T KOG0696|consen  411 FLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK  490 (683)
T ss_pred             hHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceE
Confidence            34556667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcC--CCcccccccC-----------CCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKK--SHRTDFYRDL-----------SQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~--~~~~~~~~~~-----------~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+.-..  .....+++++           +|+++.|||            .+||.+++..++++.|+.  .++.
T Consensus       491 i~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e--hnvs  568 (683)
T KOG0696|consen  491 IADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME--HNVS  568 (683)
T ss_pred             eeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH--ccCc
Confidence            999999985322  2222344443           345566775            699999999999999997  5688


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcC--CCCCCcccCCCCcCCCCCC-C
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDD-F  213 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~--~~~~~~~~~~~~d~~~f~~-~  213 (351)
                      ||..  +|.+|.++++.+ .+.|.+|||.+ .|..+|+   .||||+.|||+.+..+  ++|+.|.++...+.+|||+ |
T Consensus       569 yPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~---~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~F  643 (683)
T KOG0696|consen  569 YPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIR---EHPFFRRIDWEKLERREIQPPFKPKIKCGRDAENFDKFF  643 (683)
T ss_pred             Cccc--ccHHHHHHHHHHhhcCCccccCCCCccccchh---hCcchhhccHHHHhhccCCCCCCCccccCCchhhhhHHH
Confidence            9987  899999999995 58999999985 5566776   8999999999999777  4555667888999999997 4


Q ss_pred             CC
Q psy17600        214 PD  215 (351)
Q Consensus       214 ~~  215 (351)
                      +.
T Consensus       644 t~  645 (683)
T KOG0696|consen  644 TR  645 (683)
T ss_pred             hc
Confidence            54

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.2e-33  Score=271.44  Aligned_cols=239  Identities=67%  Similarity=1.166  Sum_probs=194.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.++++|
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vk  141 (363)
T cd05628          62 WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVK  141 (363)
T ss_pred             CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEE
Confidence            45667778999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc------------------------------------------cccccc------CCCCCCcccC-
Q psy17600         84 LSDFGLCTGLKKSHR------------------------------------------TDFYRD------LSQAKPSDFS-  114 (351)
Q Consensus        84 l~DFGla~~~~~~~~------------------------------------------~~~~~~------~~~~~~~~~~-  114 (351)
                      |+|||+|+.+.....                                          +..|..      ..+....|+| 
T Consensus       142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwS  221 (363)
T cd05628         142 LSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWS  221 (363)
T ss_pred             EeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhh
Confidence            999999875432110                                          111111      1122333432 


Q ss_pred             -----------CCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       115 -----------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                                 .+||.+.++.+.+.+|..+...+.+|+..++|++++++|.++|.++.+|++- .++++++   .||||+
T Consensus       222 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r-~~~~ei~---~hp~f~  297 (363)
T cd05628         222 LGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGA-PGVEEIK---TNPFFE  297 (363)
T ss_pred             hHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCC-CCHHHHh---CCCCCC
Confidence                       6899999999999999988778889988889999999999988788888773 3678887   899999


Q ss_pred             CCCchhhhcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCCCCCCc--cccccCccccccccccc
Q psy17600        184 GVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDG--EIIYKDWVFINYTFKRF  246 (351)
Q Consensus       184 ~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  246 (351)
                      +++|+.+.+++++.|+.+.+..|+++|+.++......+....++..  ..-..+++|.||+|..+
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (363)
T cd05628         298 GVDWEHIRERPAAIPIEIKSIDDTSNFDEFPDSDILKPTVATSNHPETDYKNKDWVFINYTYKRF  362 (363)
T ss_pred             CCCHHHHHhCCCCCCccCCCcchhhccCCCCccccccccccccCCcccccCcCCcccCCceeecC
Confidence            9999999999888888889999999999988766555444433222  23356688999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3.2e-33  Score=269.94  Aligned_cols=239  Identities=68%  Similarity=1.164  Sum_probs=197.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|+++
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vk  141 (360)
T cd05627          62 WVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK  141 (360)
T ss_pred             CEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence            45667778999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC------------------------------------------ccccccc------CCCCCCccc--
Q psy17600         84 LSDFGLCTGLKKSH------------------------------------------RTDFYRD------LSQAKPSDF--  113 (351)
Q Consensus        84 l~DFGla~~~~~~~------------------------------------------~~~~~~~------~~~~~~~~~--  113 (351)
                      |+|||+|+.+....                                          .+..|..      ..+....|+  
T Consensus       142 L~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS  221 (360)
T cd05627         142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS  221 (360)
T ss_pred             EeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc
Confidence            99999987543211                                          0111111      112223343  


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        114 ----------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       114 ----------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                                +.+||.+.++...+.++..+...+.+|+..++|++++++|.+++.+|.+|++. .++++++   .||||+
T Consensus       222 lGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~-~~~~ei~---~hp~f~  297 (360)
T cd05627         222 LGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCTDSENRIGS-NGVEEIK---SHPFFE  297 (360)
T ss_pred             ccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhccChhhcCCC-CCHHHHh---cCCCCC
Confidence                      36899999999999999988778889988889999999999988999999985 3677777   899999


Q ss_pred             CCCchhhhcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccc
Q psy17600        184 GVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFE  247 (351)
Q Consensus       184 ~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (351)
                      +++|+.+.+++.+.|+.+++..|.++|+.+++.....+.. .......-.++|.|.++++.+++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  360 (360)
T cd05627         298 GVDWGHIRERPAAIPIEIKSIDDTSNFDEFPESDILQPAE-NTIEPDYKSKDWVFLNYTYKRFE  360 (360)
T ss_pred             CCCHHHHhcCCCCCCccCCCcchhhhcCCCCcccccCCCc-cccccccCcCCcccCCceeecCC
Confidence            9999999999888888899999999999988766554433 22344566788999999988653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-31  Score=258.30  Aligned_cols=240  Identities=65%  Similarity=1.107  Sum_probs=199.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.++.++
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~k  141 (364)
T cd05599          62 WVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIK  141 (364)
T ss_pred             CCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence            45667788999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC---------------------------------------------ccccccc------CCCCCCcc
Q psy17600         84 LSDFGLCTGLKKSH---------------------------------------------RTDFYRD------LSQAKPSD  112 (351)
Q Consensus        84 l~DFGla~~~~~~~---------------------------------------------~~~~~~~------~~~~~~~~  112 (351)
                      |+|||+++.+....                                             .+..|..      ..+....|
T Consensus       142 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  221 (364)
T cd05599         142 LSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECD  221 (364)
T ss_pred             EeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeee
Confidence            99999987542211                                             0111111      11222233


Q ss_pred             c------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCC
Q psy17600        113 F------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQ  180 (351)
Q Consensus       113 ~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~  180 (351)
                      +            +.+||.+.++.+.+..+..+...+.+|....+|++++++|.+++.+|.+|++. ..++++.   .||
T Consensus       222 iwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R~~~-~~~~~ll---~h~  297 (364)
T cd05599         222 WWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGN-NGVNEIK---SHP  297 (364)
T ss_pred             eecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhcCCC-CCHHHHh---cCC
Confidence            3            26899999999999999988878888888789999999999988899999986 3567777   899


Q ss_pred             CccCCCchhhhcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccc
Q psy17600        181 FFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFE  247 (351)
Q Consensus       181 ff~~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (351)
                      ||++++|+.+...+++..+.+.+..|.++|+++++.....+..+.........+++.|.++++++++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (364)
T cd05599         298 FFKGVDWEHIRERPAPIIPELKSITDTSNFDDFEEIDLDVPTSPGPPRGKIKSKDLAFIGYTYKRFE  364 (364)
T ss_pred             CcCCCCHHHHhhcCCCCCCCCCCchhhhhccccccccccccCCCccccccccccCCCCCCCeeeCCC
Confidence            9999999999888887778888899999999988877776666655666677889999999998764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0986|consensus

Probab=99.97  E-value=5.1e-31  Score=249.76  Aligned_cols=208  Identities=25%  Similarity=0.479  Sum_probs=168.8

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      -|+|-+-+.|++++.|+|||..|.||||.-+|.+.+  .|+|+.+++|+++|++||++||..+||+|||||+|||+|+.|
T Consensus       245 ~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G  324 (591)
T KOG0986|consen  245 PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG  324 (591)
T ss_pred             CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC
Confidence            478889999999999999999999999999998776  799999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccCcCCCc------ccccc------cCCCCCCcccC------------CCCCCCCCH----HHHHHHHHc
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYR------DLSQAKPSDFS------------YPPFCSENP----QETYRKVMS  132 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~------~~~~~~~~~~~------------~~Pf~~~~~----~~~~~~i~~  132 (351)
                      +++|.|+|||..++....      |..|.      ...|..+.||+            ..||...-.    .++-+.++.
T Consensus       325 hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~  404 (591)
T KOG0986|consen  325 HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE  404 (591)
T ss_pred             CeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc
Confidence            999999999987765432      22232      22356667774            578865432    245555664


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCCc-------ccCC
Q psy17600        133 WRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPV-------QVKS  203 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~-------~~~~  203 (351)
                        +...||..  +|++|+++... |.++|++|||.. .|+.+++   .||||+++||..|..+..+||+       +.+.
T Consensus       405 --~~~ey~~k--FS~eakslc~~LL~Kdp~~RLGcrg~ga~evk---~HpfFk~lnw~rleagml~PPfiPdp~aVyakD  477 (591)
T KOG0986|consen  405 --DPEEYSDK--FSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVK---EHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKD  477 (591)
T ss_pred             --chhhcccc--cCHHHHHHHHHHHccCHHHhccCCCcCcchhh---hCcccccCCHhHHhccCCCCCCCCCccccchhh
Confidence              66788865  89999999999 558999999985 7888888   8899999999999877444332       4567


Q ss_pred             CCcCCCCCCCCCCC
Q psy17600        204 IDDTSNFDDFPDVK  217 (351)
Q Consensus       204 ~~d~~~f~~~~~~~  217 (351)
                      ..|..+|++.....
T Consensus       478 v~DIeqFs~VKGV~  491 (591)
T KOG0986|consen  478 VLDIEQFSTVKGVK  491 (591)
T ss_pred             hhhhhhccccccee
Confidence            88888888655444

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=7.7e-30  Score=248.25  Aligned_cols=238  Identities=39%  Similarity=0.700  Sum_probs=181.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~k  141 (382)
T cd05625          62 WVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIK  141 (382)
T ss_pred             cCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence            45667788999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC------------------------------------------------------Cccccccc-----
Q psy17600         84 LSDFGLCTGLKKS------------------------------------------------------HRTDFYRD-----  104 (351)
Q Consensus        84 l~DFGla~~~~~~------------------------------------------------------~~~~~~~~-----  104 (351)
                      |+|||+|......                                                      ..+..|..     
T Consensus       142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  221 (382)
T cd05625         142 LTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL  221 (382)
T ss_pred             EeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc
Confidence            9999997532100                                                      00111111     


Q ss_pred             -CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChH
Q psy17600        105 -LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVE  171 (351)
Q Consensus       105 -~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~  171 (351)
                       ..+....|+            +.+||.+.++.+...++..+...+.+|....+|++++++|.+++.+|.+|++. .+++
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~-~~~~  300 (382)
T cd05625         222 RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGK-NGAD  300 (382)
T ss_pred             CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCC-CCHH
Confidence             112222333            26899999999999888887777888877779999999999999999999984 4677


Q ss_pred             HHhcCCCCCCccCCCchhh-hcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCC--CCC------CccccccCccccccc
Q psy17600        172 ELKSLGACQFFRGVDWDHI-RERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAP--LPQ------DGEIIYKDWVFINYT  242 (351)
Q Consensus       172 ~i~~~~~h~ff~~idw~~l-~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~  242 (351)
                      +++   .||||++++|... .+..++..+.+....|+++|+.+.......+...  ..+      -.....+++.|.+|+
T Consensus       301 ei~---~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (382)
T cd05625         301 EIK---AHPFFKTIDFSSDLRQQSAPYIPKITHPTDTSNFDPVDPDKLWSDDDKEGNVNDTLNGWYKNGKHPEHAFYEFT  377 (382)
T ss_pred             HHh---cCCCcCCcChHHHHhcCCCCccCcCCCcchhhhcCCCCccccccccccccccccccccccccccccCcccccce
Confidence            777   8999999999975 4445566677888999999987654332111100  000      112334567788888


Q ss_pred             ccc
Q psy17600        243 FKR  245 (351)
Q Consensus       243 ~~~  245 (351)
                      |+.
T Consensus       378 ~~~  380 (382)
T cd05625         378 FRR  380 (382)
T ss_pred             ecc
Confidence            774

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0595|consensus

Probab=99.97  E-value=1.2e-30  Score=244.81  Aligned_cols=91  Identities=30%  Similarity=0.525  Sum_probs=83.3

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---   79 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---   79 (351)
                      ++++.++-..++++.+|||||||.||||.++|++++.++|..++.++.|++.|+++||+++||||||||+|||++..   
T Consensus        69 ~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~  148 (429)
T KOG0595|consen   69 PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARN  148 (429)
T ss_pred             cceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCC
Confidence            35677777788999999999999999999999999999999999999999999999999999999999999999764   


Q ss_pred             ---CcEEEEecCccccC
Q psy17600         80 ---GHIKLSDFGLCTGL   93 (351)
Q Consensus        80 ---~~~kl~DFGla~~~   93 (351)
                         -.+||+|||+|+.+
T Consensus       149 ~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen  149 DTSPVLKIADFGFARFL  165 (429)
T ss_pred             CCCceEEecccchhhhC
Confidence               45899999998754

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-28  Score=239.17  Aligned_cols=239  Identities=51%  Similarity=0.850  Sum_probs=181.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~k  141 (377)
T cd05629          62 WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK  141 (377)
T ss_pred             CcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEE
Confidence            45667788999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC------------------------------------------------------CcccccccC----
Q psy17600         84 LSDFGLCTGLKKS------------------------------------------------------HRTDFYRDL----  105 (351)
Q Consensus        84 l~DFGla~~~~~~------------------------------------------------------~~~~~~~~~----  105 (351)
                      |+|||+++.....                                                      ..+..|..+    
T Consensus       142 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  221 (377)
T cd05629         142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL  221 (377)
T ss_pred             EeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc
Confidence            9999998632110                                                      011111111    


Q ss_pred             --CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChH
Q psy17600        106 --SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVE  171 (351)
Q Consensus       106 --~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~  171 (351)
                        .+....|+            +.+||.+.+..+.+..+..+...+.+|....+|.+++++|.+++.+|+.|++. .++.
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r-~~~~  300 (377)
T cd05629         222 QQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGR-GGAH  300 (377)
T ss_pred             cCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCC-CCHH
Confidence              12223333            26899999999999999987777888887778999999999988899999864 3567


Q ss_pred             HHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCCCCCCCCC-CCCCCC---CCCCCccccccCccccccccccc
Q psy17600        172 ELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVK-LEIPSA---PLPQDGEIIYKDWVFINYTFKRF  246 (351)
Q Consensus       172 ~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  246 (351)
                      ++.   .||||++++|+.+.....+..+.+....+...|..-.... ...+..   +..+.......+..|.|++++++
T Consensus       301 ~~l---~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (377)
T cd05629         301 EIK---SHPFFRGVDWDTIRQIRAPFIPQLKSITDTSYFPTDELEQVPEAPALKQAAPAQQEESVELDLAFIGYTYKRF  376 (377)
T ss_pred             HHh---cCCCcCCCCHHHHccCCCCcccCCCCccccccCCccccccCccccccccccccccccccccCcccccceecCC
Confidence            777   8999999999999887777777778888888775422211 111111   11112233445566777777765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0695|consensus

Probab=99.96  E-value=1.1e-29  Score=233.01  Aligned_cols=205  Identities=30%  Similarity=0.558  Sum_probs=166.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |.+.++-.||++.++|+|.||++||||.-+++++..++|+.+++|.++|++||.|||++|||+||||.+|+|++..|++|
T Consensus       312 flvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghik  391 (593)
T KOG0695|consen  312 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIK  391 (593)
T ss_pred             eEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCcee
Confidence            67888889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc-CcCCCcc-cccccC-----------CCCCCcccC------------CCCCCC-------CC-HHHHHHHH
Q psy17600         84 LSDFGLCTG-LKKSHRT-DFYRDL-----------SQAKPSDFS------------YPPFCS-------EN-PQETYRKV  130 (351)
Q Consensus        84 l~DFGla~~-~~~~~~~-~~~~~~-----------~~~~~~~~~------------~~Pf~~-------~~-~~~~~~~i  130 (351)
                      |+|+|+|+. +..+..| .+++++           .|+.+.|||            ..||.-       .| ..-+|+-|
T Consensus       392 ltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi  471 (593)
T KOG0695|consen  392 LTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI  471 (593)
T ss_pred             ecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH
Confidence            999999985 3333333 334433           345556665            678851       12 23356667


Q ss_pred             HcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCC
Q psy17600        131 MSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSID  205 (351)
Q Consensus       131 ~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~  205 (351)
                      +.  ..+..|..  +|-.|...++. |.+||.+|||..  -|..+++   .|+||+.|||+.+.++...  +.|.+.+..
T Consensus       472 le--kqiriprs--lsvkas~vlkgflnkdp~erlgc~~~~g~~dik---~h~ffr~idwd~leqk~v~ppf~p~i~~d~  544 (593)
T KOG0695|consen  472 LE--KQIRIPRS--LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIK---SHAFFRSIDWDLLEQKQVLPPFQPQITDDY  544 (593)
T ss_pred             hh--hcccccce--eehhhHHHHHHhhcCCcHHhcCCCcccchhhhh---cchhhhhCCHHHHhhcccCCCCCCcccccc
Confidence            65  45677775  67888889988 558999999985  5777888   8899999999999887654  446788888


Q ss_pred             cCCCCCC-CCC
Q psy17600        206 DTSNFDD-FPD  215 (351)
Q Consensus       206 d~~~f~~-~~~  215 (351)
                      +..|||. |++
T Consensus       545 ~l~~fd~qft~  555 (593)
T KOG0695|consen  545 GLDNFDTQFTS  555 (593)
T ss_pred             Ccccccccccc
Confidence            8999985 665

>KOG0615|consensus

Probab=99.96  E-value=1.1e-29  Score=238.41  Aligned_cols=178  Identities=24%  Similarity=0.378  Sum_probs=144.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---Cc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---GH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~~   81 (351)
                      ++.++-.|.+++..||||||+.||+|++.+..++.+.|...+.|+.|++.|+.|||++||+||||||+|||+..+   ..
T Consensus       238 IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~l  317 (475)
T KOG0615|consen  238 IVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCL  317 (475)
T ss_pred             EEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceE
Confidence            466777899999999999999999999999999999999999999999999999999999999999999999766   68


Q ss_pred             EEEEecCccccCcCCCcc-cccccCCCCCCc--------------cc------------CCCCCCCCCHHH-HHHHHHcC
Q psy17600         82 IKLSDFGLCTGLKKSHRT-DFYRDLSQAKPS--------------DF------------SYPPFCSENPQE-TYRKVMSW  133 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~-~~~~~~~~~~~~--------------~~------------~~~Pf~~~~~~~-~~~~i~~~  133 (351)
                      +||+|||+|+........ .+++++.|..|+              |.            +++||.+..... ++++|..+
T Consensus       318 lKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G  397 (475)
T KOG0615|consen  318 LKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG  397 (475)
T ss_pred             EEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC
Confidence            999999999977644332 334444444332              32            389999886665 88999986


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                      +-.+.-|....+|++++++|.+ |..||++|..    ++++.   +||||+..+-..
T Consensus       398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL---~hpW~~~~~~~s  447 (475)
T KOG0615|consen  398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEAL---NHPWFKDAPCLS  447 (475)
T ss_pred             cccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHh---cChhhhcccccc
Confidence            6544445555699999999999 5579999987    45666   899999876443

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=1.6e-27  Score=232.03  Aligned_cols=209  Identities=44%  Similarity=0.797  Sum_probs=163.4

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+++.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||+|||.+||+||||||+|||++.++++
T Consensus        61 ~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~  140 (381)
T cd05626          61 EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHI  140 (381)
T ss_pred             CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCE
Confidence            35677788899999999999999999999999888889999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC------------------------------------------------------ccccccc----
Q psy17600         83 KLSDFGLCTGLKKSH------------------------------------------------------RTDFYRD----  104 (351)
Q Consensus        83 kl~DFGla~~~~~~~------------------------------------------------------~~~~~~~----  104 (351)
                      ||+|||+++.+....                                                      .+..|..    
T Consensus       141 kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~  220 (381)
T cd05626         141 KLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVL  220 (381)
T ss_pred             EEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHH
Confidence            999999975431100                                                      0111111    


Q ss_pred             --CCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCCh
Q psy17600        105 --LSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGV  170 (351)
Q Consensus       105 --~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~  170 (351)
                        ..+....|+|            .+||.+.++.+...++..+...+.+|....+|++++++|.+++..+.+|++ ..++
T Consensus       221 ~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~-R~~~  299 (381)
T cd05626         221 LRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLG-RNGA  299 (381)
T ss_pred             cCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccC-CCCH
Confidence              1122233432            689999998888888887766778888777999999999996644444433 1246


Q ss_pred             HHHhcCCCCCCccCCCchhhh-cCCCCCCcccCCCCcCCCCCCCCC
Q psy17600        171 EELKSLGACQFFRGVDWDHIR-ERPAAIPVQVKSIDDTSNFDDFPD  215 (351)
Q Consensus       171 ~~i~~~~~h~ff~~idw~~l~-~~~~~~~~~~~~~~d~~~f~~~~~  215 (351)
                      ++++   .||||++++|.... ..+++..+.+....+.++|+...+
T Consensus       300 ~~~l---~hp~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  342 (381)
T cd05626         300 DDIK---AHPFFSEVDFSSDIRTQPAPYVPKISHPMDTSNFDPVEE  342 (381)
T ss_pred             HHHh---cCcccCCCChhHHhhcCCCCccCcCCCcchhhhcCCCCc
Confidence            7777   89999999999854 445555667888889999986544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.1e-28  Score=230.92  Aligned_cols=234  Identities=45%  Similarity=0.800  Sum_probs=181.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+||||++||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~k  141 (350)
T cd05573          62 WIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIK  141 (350)
T ss_pred             CccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence            34455667889999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC------------------------------------ccccccc------CCCCCCccc--------
Q psy17600         84 LSDFGLCTGLKKSH------------------------------------RTDFYRD------LSQAKPSDF--------  113 (351)
Q Consensus        84 l~DFGla~~~~~~~------------------------------------~~~~~~~------~~~~~~~~~--------  113 (351)
                      |+|||++.......                                    .+..|..      ..+....|.        
T Consensus       142 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  221 (350)
T cd05573         142 LADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILY  221 (350)
T ss_pred             eecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhh
Confidence            99999987654322                                    0111111      111222232        


Q ss_pred             ----CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       114 ----~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                          +..||.+.+....+.++..+...+.+|....++++++++|.+++.+|.+|..+   ++++.   .||||++++|+.
T Consensus       222 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R~~s---~~~ll---~hp~~~~~~~~~  295 (350)
T cd05573         222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRLGS---FEEIK---SHPFFKGIDWEN  295 (350)
T ss_pred             hhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhcCCC---HHHHh---cCCCcCCCCHHH
Confidence                36899999999999999987778888887778999999999988899999874   45666   899999999999


Q ss_pred             hhcCCCCCCcccCCCCcCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccc
Q psy17600        190 IRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTF  243 (351)
Q Consensus       190 l~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (351)
                      .....++..+.+.+..+..+|++..+.....+..+.......-.+...|.+|+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (350)
T cd05573         296 LRETKPPFVPELSSPLDTSNFDDFEDDKDLSDYLSQNSKKLNKGKQLAFVGFTY  349 (350)
T ss_pred             HhhCCCCcCCCCCCchhhhhcCCCCcccccccccccccccccccccCccCCCcc
Confidence            987777777888899999999887665543332222112222233455666655

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0581|consensus

Probab=99.96  E-value=8.2e-29  Score=230.45  Aligned_cols=90  Identities=26%  Similarity=0.427  Sum_probs=85.3

Q ss_pred             CceEeeeEEEecCCc-EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCC
Q psy17600          3 DYACLKQLRMSDPIN-LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~-lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~   80 (351)
                      +|++..|..|.++.. ++|+||||.||+|..++...+.++|.....++.+++.||.|||. ++||||||||+|||++..|
T Consensus       137 pyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG  216 (364)
T KOG0581|consen  137 PYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG  216 (364)
T ss_pred             CCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC
Confidence            688899999999995 99999999999999999988999999999999999999999995 9999999999999999999


Q ss_pred             cEEEEecCcccc
Q psy17600         81 HIKLSDFGLCTG   92 (351)
Q Consensus        81 ~~kl~DFGla~~   92 (351)
                      .+||||||.++.
T Consensus       217 eVKicDFGVS~~  228 (364)
T KOG0581|consen  217 EVKICDFGVSGI  228 (364)
T ss_pred             CEEeccccccHH
Confidence            999999999753

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.95  E-value=3.9e-27  Score=224.46  Aligned_cols=205  Identities=38%  Similarity=0.659  Sum_probs=167.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.+..+..|++...+|+||||++||+|.+++.+. ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.+
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~  141 (330)
T cd05601          62 WIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHI  141 (330)
T ss_pred             CCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCE
Confidence            3455566788999999999999999999999875 679999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC--------cccccccC------------CCCCCccc------------CCCCCCCCCHHHHHHHH
Q psy17600         83 KLSDFGLCTGLKKSH--------RTDFYRDL------------SQAKPSDF------------SYPPFCSENPQETYRKV  130 (351)
Q Consensus        83 kl~DFGla~~~~~~~--------~~~~~~~~------------~~~~~~~~------------~~~Pf~~~~~~~~~~~i  130 (351)
                      ||+|||++..+....        .+..|..+            .+....|.            +..||...+....+.++
T Consensus       142 kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i  221 (330)
T cd05601         142 KLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI  221 (330)
T ss_pred             EeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHH
Confidence            999999987543221        11112211            11122333            26899999999999999


Q ss_pred             HcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCC
Q psy17600        131 MSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF  210 (351)
Q Consensus       131 ~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f  210 (351)
                      ......+.+|....++.+++++|.+++.+|.+|++    ++++.   .||||+.++|+.+....++..+.++...|.++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~li~~ll~~p~~R~t----~~~l~---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (330)
T cd05601         222 MNFQRFLKFPEDPKVSSDFLDLIQSLLCGQKERLG----YEGLC---CHPFFSKIDWNNIRNSLPPFVPTLKSDDDTSNF  294 (330)
T ss_pred             HcCCCccCCCCCCCCCHHHHHHHHHHccChhhCCC----HHHHh---CCCCcCCCCHHHHhhCCCCccCcCCCcchhhhc
Confidence            88777778888777899999999998789999997    45666   899999999999988777777788888899999


Q ss_pred             CCCCC
Q psy17600        211 DDFPD  215 (351)
Q Consensus       211 ~~~~~  215 (351)
                      ++...
T Consensus       295 ~~~~~  299 (330)
T cd05601         295 DEPEK  299 (330)
T ss_pred             CCCcc
Confidence            76443

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0603|consensus

Probab=99.95  E-value=1.5e-28  Score=241.96  Aligned_cols=229  Identities=33%  Similarity=0.547  Sum_probs=179.3

Q ss_pred             CCceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          2 KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         2 ~~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      ..|.+.+++.||++.++|++++|..||+|+..+.+...+.+...++|.+++++|++++|+.+|+|||+|++||+++.+|+
T Consensus        56 ~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh  135 (612)
T KOG0603|consen   56 TPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH  135 (612)
T ss_pred             CCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc
Confidence            36889999999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCc---ccccccC----CCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCCC
Q psy17600         82 IKLSDFGLCTGLKKSHR---TDFYRDL----SQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPPE  142 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~---~~~~~~~----~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  142 (351)
                      +++.|||+++.......   +..|+..    ++....|||            ..||.+    ++...|+.  ..+.+|..
T Consensus       136 i~~tdfglske~v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~--~~~~~p~~  209 (612)
T KOG0603|consen  136 IKLTDFGLSKEAVKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK--AELEMPRE  209 (612)
T ss_pred             cccCCchhhhHhHhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh--hccCCchh
Confidence            99999999886533222   2223221    344556664            467776    67777775  45666765


Q ss_pred             CCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcC--CCCCCcccCCCCcCCCCCC-CCCCC
Q psy17600        143 VPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDD-FPDVK  217 (351)
Q Consensus       143 ~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~--~~~~~~~~~~~~d~~~f~~-~~~~~  217 (351)
                        ++.++++++.+ +.++|..|||.+ .+..+|+   .|+||..|||+.+..+  ++++.+.+..+.|+.+||. |+...
T Consensus       210 --l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik---~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~  284 (612)
T KOG0603|consen  210 --LSAEARSLFRQLFKRNPENRLGAGPDGVDEIK---QHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQV  284 (612)
T ss_pred             --hhHHHHHHHHHHHhhCHHHHhccCcchhHHHh---ccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCC
Confidence              78999999999 568999999974 6777777   8999999999988666  4555567888999999997 66544


Q ss_pred             CC-CCCCCCCCCccccccCcccccc
Q psy17600        218 LE-IPSAPLPQDGEIIYKDWVFINY  241 (351)
Q Consensus       218 ~~-~~~~~~~~~~~~~~~~~~~~~~  241 (351)
                      .. .|..+.+.....++.+..|+.+
T Consensus       285 P~dsp~~~~~~s~~~if~g~sfva~  309 (612)
T KOG0603|consen  285 PADSPLLSASGSDHTIFSGPSFVAP  309 (612)
T ss_pred             cccCCCCCCCccccchhcCCCccCh
Confidence            33 3444444444345555444433

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=6.3e-27  Score=227.19  Aligned_cols=208  Identities=42%  Similarity=0.786  Sum_probs=166.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        62 ~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ik  141 (376)
T cd05598          62 WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK  141 (376)
T ss_pred             CcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEE
Confidence            45667788999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--------------------------------------------------CcccccccC------CC
Q psy17600         84 LSDFGLCTGLKKS--------------------------------------------------HRTDFYRDL------SQ  107 (351)
Q Consensus        84 l~DFGla~~~~~~--------------------------------------------------~~~~~~~~~------~~  107 (351)
                      |+|||+|..+...                                                  ..+..|..+      .+
T Consensus       142 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  221 (376)
T cd05598         142 LTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY  221 (376)
T ss_pred             EEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCC
Confidence            9999997532100                                                  001111111      11


Q ss_pred             CCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhc
Q psy17600        108 AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKS  175 (351)
Q Consensus       108 ~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~  175 (351)
                      ....|+            +.+||.+.++.+....+..+.....+|....+++++.++|.+++.+|.+|++.. .++++. 
T Consensus       222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~-t~~ell-  299 (376)
T cd05598         222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKN-GADEIK-  299 (376)
T ss_pred             CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhcCHhhcCCCC-CHHHHh-
Confidence            222333            268999999988888888877777777777789999999999989999999753 466777 


Q ss_pred             CCCCCCccCCCchhhh-cCCCCCCcccCCCCcCCCCCCCCC
Q psy17600        176 LGACQFFRGVDWDHIR-ERPAAIPVQVKSIDDTSNFDDFPD  215 (351)
Q Consensus       176 ~~~h~ff~~idw~~l~-~~~~~~~~~~~~~~d~~~f~~~~~  215 (351)
                        .||||++++|..+. ..+++..+.+....+.++|+....
T Consensus       300 --~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (376)
T cd05598         300 --AHPFFKGIDFASLIRRQKAPYIPKITHPTDTSNFDPVDP  338 (376)
T ss_pred             --CCCCcCCCCHHHHhhcCCCCCCCcCCCcchhhhcCCCCc
Confidence              89999999999985 444555566777888888876544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.95  E-value=9.3e-27  Score=222.41  Aligned_cols=206  Identities=42%  Similarity=0.740  Sum_probs=163.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.+..+..|++...+|+||||++||+|.+++.+ ...+++..++.++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        62 ~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~  141 (332)
T cd05623          62 WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI  141 (332)
T ss_pred             CEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCE
Confidence            456677789999999999999999999999976 4678999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC--------cccccccC-----------CCCCCcccC------------CCCCCCCCHHHHHHHHH
Q psy17600         83 KLSDFGLCTGLKKSH--------RTDFYRDL-----------SQAKPSDFS------------YPPFCSENPQETYRKVM  131 (351)
Q Consensus        83 kl~DFGla~~~~~~~--------~~~~~~~~-----------~~~~~~~~~------------~~Pf~~~~~~~~~~~i~  131 (351)
                      ||+|||++.......        .+..|..+           .+....|+|            .+||.+.+..+.+.++.
T Consensus       142 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~  221 (332)
T cd05623         142 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM  221 (332)
T ss_pred             EEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence            999999986542211        11122211           122234432            68999999999999998


Q ss_pred             cCCCceeCCCCC-CCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCC
Q psy17600        132 SWRDTLVFPPEV-PISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF  210 (351)
Q Consensus       132 ~~~~~~~~p~~~-~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f  210 (351)
                      .......+|... .++++++++|.+++..+..|++. .++++++   .||||.+++|+.+.....+..+...+..+.+++
T Consensus       222 ~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r-~~~~~~~---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (332)
T cd05623         222 NHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQ-NGIEDFK---QHPFFTGIDWDNIRNCEAPYIPEVSSPTDTSNF  297 (332)
T ss_pred             CCCccccCCCccccCCHHHHHHHHHHccChhhhcCC-CCHHHHh---CCCCcCCCCHHHHhhCCCCccCCCCCCcccccC
Confidence            866666666643 47999999999977666667653 3567777   889999999999988777777777788888877


Q ss_pred             CCC
Q psy17600        211 DDF  213 (351)
Q Consensus       211 ~~~  213 (351)
                      +..
T Consensus       298 ~~~  300 (332)
T cd05623         298 DVD  300 (332)
T ss_pred             CCC
Confidence            643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=7.3e-27  Score=226.88  Aligned_cols=234  Identities=37%  Similarity=0.675  Sum_probs=173.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++... .+++..++.++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus       104 ~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~k  182 (370)
T cd05621         104 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLK  182 (370)
T ss_pred             CEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEE
Confidence            4566677899999999999999999999998654 689999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--------cccccccCC----------CCCCcccC------------CCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSH--------RTDFYRDLS----------QAKPSDFS------------YPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~--------~~~~~~~~~----------~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||+|.......        .+..|..+.          +....|+|            .+||.+.+....+..|...
T Consensus       183 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~  262 (370)
T cd05621         183 LADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH  262 (370)
T ss_pred             EEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            99999997653211        122222211          22334432            6899999999999999987


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchh--hhcCCCCCCcccCCCCcCCCCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDH--IRERPAAIPVQVKSIDDTSNFD  211 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~--l~~~~~~~~~~~~~~~d~~~f~  211 (351)
                      ...+.+|....+|..++++|.+++.++..|++- .+++++.   .||||++.+|+.  +....++..+.+.+..|.++|+
T Consensus       263 ~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R-~~~~e~l---~hp~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  338 (370)
T cd05621         263 KNSLNFPEDVEISKHAKNLICAFLTDREVRLGR-NGVEEIK---QHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFD  338 (370)
T ss_pred             CcccCCCCcccCCHHHHHHHHHHccCchhccCC-CCHHHHh---cCcccCCCCcChHhcCCCCCCcCCCCCCcchhhhcC
Confidence            777888888789999999999988777776642 3567777   889999876654  4444555666778888899998


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCccccccccc
Q psy17600        212 DFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFK  244 (351)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (351)
                      +..+.......-  +.....+..+..|.+|+|-
T Consensus       339 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  369 (370)
T cd05621         339 DIEDDKGDVETF--PIPKAFVGNQLPFIGFTYY  369 (370)
T ss_pred             CccccccccccC--CCCccccccccccCCCEec
Confidence            655432211111  1112233345667777653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.95  E-value=1.5e-26  Score=221.02  Aligned_cols=205  Identities=43%  Similarity=0.749  Sum_probs=161.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.+.++..|++...+|+||||++||+|.+++.+ ...+++..++.++.|++.||+|+|++||+||||||+||+++.++.+
T Consensus        62 ~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~  141 (331)
T cd05624          62 WITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHI  141 (331)
T ss_pred             CEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCE
Confidence            456677789999999999999999999999976 4678999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC--------cccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHH
Q psy17600         83 KLSDFGLCTGLKKSH--------RTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVM  131 (351)
Q Consensus        83 kl~DFGla~~~~~~~--------~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~  131 (351)
                      ||+|||+++......        .+..|..+           .+....|+            +..||.+.+..+.+.++.
T Consensus       142 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~  221 (331)
T cd05624         142 RLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM  221 (331)
T ss_pred             EEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHH
Confidence            999999987543211        11112111           11223343            268999999999999998


Q ss_pred             cCCCceeCCCCC-CCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCC
Q psy17600        132 SWRDTLVFPPEV-PISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF  210 (351)
Q Consensus       132 ~~~~~~~~p~~~-~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f  210 (351)
                      .....+.+|... .++++++++|.+++..+.+|++. .++++++   .||||++++|+.+++..++..+...+..+.++|
T Consensus       222 ~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~-~~~~~~~---~h~~f~~~~~~~~~~~~~~~~p~~~~~~~~~~~  297 (331)
T cd05624         222 NHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQ-NGIEDFK---KHAFFEGIDWENIRNLEAPYIPDVSSPSDTSNF  297 (331)
T ss_pred             cCCCcccCCCccccCCHHHHHHHHHHccCchhhcCC-CCHHHHh---cCCCcCCCCHHHHhhCCCCccCCCCCcchhhhc
Confidence            766666666653 47899999999977666666653 4667777   899999999999987777666666666777777


Q ss_pred             CC
Q psy17600        211 DD  212 (351)
Q Consensus       211 ~~  212 (351)
                      +.
T Consensus       298 ~~  299 (331)
T cd05624         298 DV  299 (331)
T ss_pred             CC
Confidence            64

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0575|consensus

Probab=99.95  E-value=1.6e-27  Score=233.43  Aligned_cols=168  Identities=27%  Similarity=0.512  Sum_probs=145.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+|..+..|+|..++|||+|+|..|+|..++++++.++|.+|++|+.||+.||.|||+++|||||||..|++++++.++|
T Consensus        79 nIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VK  158 (592)
T KOG0575|consen   79 NIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVK  158 (592)
T ss_pred             cEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEE
Confidence            45667788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--CcccccccCCCCCC-----------ccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS--HRTDFYRDLSQAKP-----------SDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~--~~~~~~~~~~~~~~-----------~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||||..+...  ...+.++++.|..|           +|.            +.|||...+..++|++|..  ..+.
T Consensus       159 IgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~--~~Y~  236 (592)
T KOG0575|consen  159 IGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL--NEYS  236 (592)
T ss_pred             ecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh--cCcc
Confidence            9999999987643  23445555554443           343            3799999999999999996  5677


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      +|.  .+|.+|+|||.+++ .+|.+|..    +++|.   .|+||
T Consensus       237 ~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL---~h~Ff  272 (592)
T KOG0575|consen  237 MPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVL---DHPFF  272 (592)
T ss_pred             ccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHh---cCHhh
Confidence            887  59999999999955 79999986    56676   89999

>KOG0583|consensus

Probab=99.95  E-value=4.1e-27  Score=227.83  Aligned_cols=172  Identities=28%  Similarity=0.481  Sum_probs=144.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-CcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~~   82 (351)
                      .++.++-.++++..+|+|||||.||+|++++.+.+.+.|..++.++.|++.|++|||++||+||||||||||++.+ +++
T Consensus        81 nI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~  160 (370)
T KOG0583|consen   81 NIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNL  160 (370)
T ss_pred             CEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCE
Confidence            4677888899999999999999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             EEEecCccccCc-C-CCcccccccCCC-------------CCCcccC------------CCCCCCCCHHHHHHHHHcCCC
Q psy17600         83 KLSDFGLCTGLK-K-SHRTDFYRDLSQ-------------AKPSDFS------------YPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        83 kl~DFGla~~~~-~-~~~~~~~~~~~~-------------~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                      ||+|||++.... . ....++++++.|             +...|.|            +.||...+...++.+|..  +
T Consensus       161 Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~--~  238 (370)
T KOG0583|consen  161 KLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK--G  238 (370)
T ss_pred             EEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc--C
Confidence            999999998662 2 222223333222             2334433            789999999999999886  6


Q ss_pred             ceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        136 TLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      .+.+|..+. |++++++|.+ |..+|.+|..    ..+|.   .||||+.-
T Consensus       239 ~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t----~~~i~---~h~w~~~~  281 (370)
T KOG0583|consen  239 EFKIPSYLL-SPEARSLIEKMLVPDPSTRIT----LLEIL---EHPWFQKE  281 (370)
T ss_pred             CccCCCCcC-CHHHHHHHHHHcCCCcccCCC----HHHHh---hChhhccC
Confidence            788888755 9999999999 5579999887    45666   89999864

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.95  E-value=3.1e-26  Score=218.04  Aligned_cols=234  Identities=26%  Similarity=0.522  Sum_probs=173.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+||||++||+|..++.+...+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        57 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~k  136 (325)
T cd05604          57 FLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVV  136 (325)
T ss_pred             CCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence            34556678999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|+            +.+||.+.+..++++.+...  .+.
T Consensus       137 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~--~~~  214 (325)
T cd05604         137 LTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK--PLV  214 (325)
T ss_pred             EeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC--Ccc
Confidence            99999987432111       1111211      112223333            36899999999999988863  344


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCCCCCC-CC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDD-FP  214 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~~f~~-~~  214 (351)
                      +++  ..+.++.++|.+++ .+|.+|.+......++.   .||||++++|..+..++.+  +.+...+..+.++|+. +.
T Consensus       215 ~~~--~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
T cd05604         215 LRP--GASLTAWSILEELLEKDRQRRLGAKEDFLEIQ---EHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDAVFT  289 (325)
T ss_pred             CCC--CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHh---cCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCCccc
Confidence            444  37899999999954 79999999877777887   8899999999999776544  4456677788888875 33


Q ss_pred             CCCCCCCCC----CCCCCccccccCccccccccc
Q psy17600        215 DVKLEIPSA----PLPQDGEIIYKDWVFINYTFK  244 (351)
Q Consensus       215 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  244 (351)
                      +........    +...+......++.|.|++|.
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (325)
T cd05604         290 EETVPYSVCFSSDYSIVNASVLEADDAFVGFSYA  323 (325)
T ss_pred             cCCcccCcccccccccccccccccccccCCCEec
Confidence            332211111    111222334556667776654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=2.8e-26  Score=218.30  Aligned_cols=201  Identities=27%  Similarity=0.509  Sum_probs=158.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|++...+|+||||++||+|..++.+.+.+++..++.++.|++.||+|||++||+||||||+||+++.++.+||
T Consensus        57 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl  136 (323)
T cd05571          57 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKI  136 (323)
T ss_pred             CCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEE
Confidence            34456678999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..+      .+....|.            +..||.+.+....+..+..  ..+.+
T Consensus       137 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~--~~~~~  214 (323)
T cd05571         137 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRF  214 (323)
T ss_pred             eeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc--CCCCC
Confidence            9999987532111       11122211      12223333            2589999998888888876  34566


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCCCCCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDD  212 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~~f~~  212 (351)
                      |..  ++++++++|.+ |..+|.+|++.. ..+.++.   .||||++++|+.+..+...  +.+.+.+..|+.+|++
T Consensus       215 p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (323)
T cd05571         215 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIM---EHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDE  286 (323)
T ss_pred             CCC--CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            654  78999999999 457999999864 3566776   8999999999999766543  4456777788888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.95  E-value=3.3e-26  Score=217.71  Aligned_cols=232  Identities=27%  Similarity=0.524  Sum_probs=170.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|++...+|+||||++||+|..++.+...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl  137 (323)
T cd05575          58 LVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVL  137 (323)
T ss_pred             CCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEE
Confidence            44556778999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..+      .+....|.            +.+||.+.+..+.+..+...  .+..
T Consensus       138 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~  215 (323)
T cd05575         138 TDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--PLRL  215 (323)
T ss_pred             eccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCC
Confidence            9999987432111       11112211      12222333            26899999999999988863  3344


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCC-CCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDD-FPD  215 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~-~~~  215 (351)
                      ++  .+++++.++|.+ |..+|.+|.+......++.   .||||+.++|+.+.++..  ++.+.+....+..+|+. +.+
T Consensus       216 ~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (323)
T cd05575         216 KP--NISVSARHLLEGLLQKDRTKRLGAKDDFLEIK---NHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDPEFTE  290 (323)
T ss_pred             CC--CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHH---cCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCccccc
Confidence            44  368999999999 5579999999887777887   889999999999976644  44455666677777764 333


Q ss_pred             CCCCCCCCCCCC----CccccccCcccccccc
Q psy17600        216 VKLEIPSAPLPQ----DGEIIYKDWVFINYTF  243 (351)
Q Consensus       216 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  243 (351)
                      ..........++    .......++.|.||+|
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (323)
T cd05575         291 EPVPNSVGKSPDSVLVSASVKEADDAFLGFSY  322 (323)
T ss_pred             cccccccCCCcccccccccccccccccCCCcc
Confidence            332222221111    2223445566666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=2.1e-26  Score=219.74  Aligned_cols=206  Identities=35%  Similarity=0.678  Sum_probs=165.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||.||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        79 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k  158 (329)
T PTZ00263         79 FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVK  158 (329)
T ss_pred             CCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEE
Confidence            34556667899999999999999999999999888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSHR----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~~----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      |+|||+++.......    +..|..      ..+....|+            +.+||.+.++...++++...  .+.+|.
T Consensus       159 l~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~p~  236 (329)
T PTZ00263        159 VTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RLKFPN  236 (329)
T ss_pred             EeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CcCCCC
Confidence            999999876543221    111211      122333443            26899999999999999864  455665


Q ss_pred             CCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCCCCCC
Q psy17600        142 EVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDDFPDV  216 (351)
Q Consensus       142 ~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~~~~~  216 (351)
                      .  ++.+++++|.+ |..+|.+|++.. ...+++.   .||||++++|+.+..+.  ++.++.+....+..+|+.+++.
T Consensus       237 ~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll---~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  310 (329)
T PTZ00263        237 W--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVK---NHPYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPDS  310 (329)
T ss_pred             C--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh---cCCccCCCCHHHHHhCCCCCCcCCCCCCcccchhccCCccc
Confidence            3  78999999999 558999999863 4567777   89999999999997654  4455567788889999887653

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.95  E-value=3.8e-26  Score=217.38  Aligned_cols=204  Identities=31%  Similarity=0.553  Sum_probs=160.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|++...+|+|||||+||+|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus        63 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL  142 (324)
T cd05587          63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKI  142 (324)
T ss_pred             eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEE
Confidence            45566778999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..+      .+....|+            +.+||.+.+..+.+..+...  ...+
T Consensus       143 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~  220 (324)
T cd05587         143 ADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSY  220 (324)
T ss_pred             eecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCC
Confidence            9999986432111       11112211      12223343            26899999999999988863  3455


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCCCCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDDFPD  215 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~~~~  215 (351)
                      |..  +++++.++|.+ |..+|.+|++.+ ...++++   .||||++++|..+..+..  ++.+.+.+..+..+|+.+..
T Consensus       221 ~~~--~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~---~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (324)
T cd05587         221 PKS--LSKEAVSICKGLLTKHPAKRLGCGPTGERDIR---EHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFT  295 (324)
T ss_pred             CCC--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh---cCCCcCCCCHHHHHhCCCCCCccCcCCCcchhhhcCcccc
Confidence            553  78999999999 557999999975 3456777   889999999999976643  34455677788888887543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.95  E-value=2.3e-26  Score=218.71  Aligned_cols=202  Identities=33%  Similarity=0.572  Sum_probs=160.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|..++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~k  136 (320)
T cd05590          57 FLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCK  136 (320)
T ss_pred             chhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEE
Confidence            44556778899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|+            +..||.+.+..++++.+..  ..+.
T Consensus       137 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~--~~~~  214 (320)
T cd05590         137 LADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN--DEVV  214 (320)
T ss_pred             EeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc--CCCC
Confidence            99999987532111       1111211      112233343            2689999999999999886  3445


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~  212 (351)
                      +|..  ++.+++++|.++ ..+|.+|++..  .+.+++.   .||||++++|+.+..+..  ++.+.+.+..|.+||+.
T Consensus       215 ~~~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (320)
T cd05590         215 YPTW--LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAIL---RHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDP  288 (320)
T ss_pred             CCCC--CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            5543  789999999995 57999999874  3456676   899999999999976644  44556788899999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=4e-26  Score=221.74  Aligned_cols=208  Identities=39%  Similarity=0.705  Sum_probs=163.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.. ..+++..++.++.|++.||+|||++||+||||||+||+++.++.+|
T Consensus       104 ~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ik  182 (371)
T cd05622         104 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK  182 (371)
T ss_pred             CCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEE
Confidence            345667789999999999999999999999865 4589999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--------cccccccCC----------CCCCcccC------------CCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSH--------RTDFYRDLS----------QAKPSDFS------------YPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~--------~~~~~~~~~----------~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||++..+....        .+..|..+.          +....|+|            .+||.+.+....+.+|+..
T Consensus       183 L~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  262 (371)
T cd05622         183 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH  262 (371)
T ss_pred             EEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            99999987543211        122222211          22234432            6899999999999999987


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCch--hhhcCCCCCCcccCCCCcCCCCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWD--HIRERPAAIPVQVKSIDDTSNFD  211 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~--~l~~~~~~~~~~~~~~~d~~~f~  211 (351)
                      ...+.+|....+|.+++++|.+++.++..|++-. ++++++   .|+||++.+|.  .+++..++..+...+..+.++|+
T Consensus       263 ~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~-~~~ei~---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (371)
T cd05622         263 KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRN-GVEEIK---RHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD  338 (371)
T ss_pred             CCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCC-CHHHHh---cCcccCCCChhHHhcCCCCCCCCCCCCCcchhhhcC
Confidence            7777888877799999999999888888877643 567777   88999986654  45454555556677788888887


Q ss_pred             CCCCC
Q psy17600        212 DFPDV  216 (351)
Q Consensus       212 ~~~~~  216 (351)
                      +....
T Consensus       339 ~~~~~  343 (371)
T cd05622         339 DIEED  343 (371)
T ss_pred             CCccc
Confidence            65543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.95  E-value=4e-26  Score=217.14  Aligned_cols=205  Identities=30%  Similarity=0.539  Sum_probs=160.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+||||++||+|...+.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        62 ~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k  141 (323)
T cd05616          62 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK  141 (323)
T ss_pred             eEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEE
Confidence            34456677899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|+            +.+||.+.+...++..+...  .+.
T Consensus       142 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~--~~~  219 (323)
T cd05616         142 IADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVA  219 (323)
T ss_pred             EccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCC
Confidence            99999987532111       1111211      122233343            26899999999999988863  455


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCCccc-CCCCcCCCCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQV-KSIDDTSNFDDFPD  215 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~-~~~~d~~~f~~~~~  215 (351)
                      +|..  ++.+++++|.+++ .+|.+|++.. .+..+++   .||||+.++|+.+..+..++|... ....|..+|+.+..
T Consensus       220 ~p~~--~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T cd05616         220 YPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIK---EHAFFRYIDWEKLERKEVQPPYKPKACGRDAENFDKFFT  294 (323)
T ss_pred             CCCc--CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHh---cCCCcCCCCHHHHHhCCCCCCcCCcCCCchhhhcCchhc
Confidence            6653  7999999999954 7999999974 4566776   899999999999987765554422 23467777877655

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-25  Score=214.75  Aligned_cols=207  Identities=44%  Similarity=0.763  Sum_probs=161.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.+..+..|++..++|+||||++||+|.+++.+ ...+++..++.++.|++.||.|||+++|+||||||+|||++.++.+
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~  141 (331)
T cd05597          62 WITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHI  141 (331)
T ss_pred             CCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCE
Confidence            345567789999999999999999999999976 4578999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC--------cccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHH
Q psy17600         83 KLSDFGLCTGLKKSH--------RTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVM  131 (351)
Q Consensus        83 kl~DFGla~~~~~~~--------~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~  131 (351)
                      ||+|||++..+....        .+..|..+           .+....|+            +..||.+.+..+.+..+.
T Consensus       142 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~  221 (331)
T cd05597         142 RLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM  221 (331)
T ss_pred             EEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            999999986543221        11112211           11223343            268999999999999998


Q ss_pred             cCCCceeCCCCC-CCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCC
Q psy17600        132 SWRDTLVFPPEV-PISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF  210 (351)
Q Consensus       132 ~~~~~~~~p~~~-~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f  210 (351)
                      .......+|... .++++++++|.+++..+..|.+- ..++++.   .||||++++|..+....++..+...+..+.++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r-~~~~~~l---~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (331)
T cd05597         222 NHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGR-NGLQDFK---DHPFFEGIDWDNIRNSTAPYVPEVSSPTDTSNF  297 (331)
T ss_pred             cCCCcccCCCccCCCCHHHHHHHHHHccCcccccCC-CCHHHHh---cCCCCCCCCHHHHhhCCCCccCcCCCcchhhhc
Confidence            766666666543 47999999999976666666553 2466776   899999999999988777766777778888888


Q ss_pred             CCCC
Q psy17600        211 DDFP  214 (351)
Q Consensus       211 ~~~~  214 (351)
                      +...
T Consensus       298 ~~~~  301 (331)
T cd05597         298 DVDD  301 (331)
T ss_pred             CCcc
Confidence            6533

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.94  E-value=7.7e-26  Score=217.25  Aligned_cols=204  Identities=26%  Similarity=0.558  Sum_probs=162.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|++...+|+|||||+||+|.+++.+...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus        93 Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL  172 (340)
T PTZ00426         93 CVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKM  172 (340)
T ss_pred             CcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEE
Confidence            45566678999999999999999999999998888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC----ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCC
Q psy17600         85 SDFGLCTGLKKSH----RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE  142 (351)
Q Consensus        85 ~DFGla~~~~~~~----~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  142 (351)
                      +|||+++.+....    .+..|..      ..+....|+            +.+||.+.++...++.+...  ...+|..
T Consensus       173 ~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~  250 (340)
T PTZ00426        173 TDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG--IIYFPKF  250 (340)
T ss_pred             ecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC--CCCCCCC
Confidence            9999997653321    1111221      112233343            26899999999999999863  4556654


Q ss_pred             CCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCCCCC
Q psy17600        143 VPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDDFPD  215 (351)
Q Consensus       143 ~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~~~~  215 (351)
                        ++++++++|++++ .+|.+|++.. ..+++++   .||||++++|..+..++.  +..|......+.++|+...+
T Consensus       251 --~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~---~hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  322 (340)
T PTZ00426        251 --LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVK---EHPWFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERVQE  322 (340)
T ss_pred             --CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCCCcchhhcCCCcc
Confidence              7899999999955 7999999863 4677777   889999999999876654  44456667777788765444

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=8.3e-26  Score=219.40  Aligned_cols=208  Identities=38%  Similarity=0.714  Sum_probs=162.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus       104 ~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~k  182 (370)
T cd05596         104 WIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK  182 (370)
T ss_pred             CcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEE
Confidence            455667789999999999999999999998865 4689999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--------cccccccCC----------CCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSH--------RTDFYRDLS----------QAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~--------~~~~~~~~~----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||++.......        .+..|..+.          +....|+            +.+||.+.+....+.+|...
T Consensus       183 L~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~  262 (370)
T cd05596         183 LADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH  262 (370)
T ss_pred             EEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC
Confidence            99999987543211        112222211          1223343            26899999999999999987


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhh--cCCCCCCcccCCCCcCCCCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR--ERPAAIPVQVKSIDDTSNFD  211 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~--~~~~~~~~~~~~~~d~~~f~  211 (351)
                      ...+.+|....+|.+++++|.+++..++.|++ ..+++++.   .||||++.+|....  ...++..+...+..+.++|+
T Consensus       263 ~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~-R~s~~ell---~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  338 (370)
T cd05596         263 KNSLTFPDDIEISKQAKDLICAFLTDREVRLG-RNGVDEIK---SHPFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFD  338 (370)
T ss_pred             CCcCCCCCcCCCCHHHHHHHHHHccChhhccC-CCCHHHHh---cCcccCCCChhhHHhcCCCcCccCcCCCcchhhhcC
Confidence            77788888878999999999997765555543 22567777   88999999988553  33445556677888888998


Q ss_pred             CCCCC
Q psy17600        212 DFPDV  216 (351)
Q Consensus       212 ~~~~~  216 (351)
                      +..+.
T Consensus       339 ~~~~~  343 (370)
T cd05596         339 DIEDD  343 (370)
T ss_pred             Ccccc
Confidence            75543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0591|consensus

Probab=99.94  E-value=3.5e-28  Score=218.79  Aligned_cols=82  Identities=33%  Similarity=0.536  Sum_probs=72.5

Q ss_pred             EecCCc-EEEEEecCCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeeccCCCCcEEecCCCcE
Q psy17600         12 MSDPIN-LYLIMEFLPGGDMMTLLM----KKDTLSEECTQFYIAETALAIDSIHK--LG--FIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus        12 f~~~~~-lylVmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~al~~lH~--~~--iihrDlkp~Nill~~~~~~   82 (351)
                      |..... +|||||||.+|||...++    .+..++|..+..|+.|++.||.+||.  .+  |+||||||.||+++.+|.+
T Consensus        88 f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvv  167 (375)
T KOG0591|consen   88 FIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVV  167 (375)
T ss_pred             hhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCce
Confidence            444444 899999999999999886    34578999999999999999999999  45  9999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+||||++.+
T Consensus       168 KLGDfGL~r~l  178 (375)
T KOG0591|consen  168 KLGDFGLGRFL  178 (375)
T ss_pred             eeccchhHhHh
Confidence            99999998643

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=1.1e-25  Score=213.84  Aligned_cols=201  Identities=31%  Similarity=0.578  Sum_probs=157.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|++...+|+|||||+||+|...+.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL  137 (321)
T cd05591          58 LTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKL  137 (321)
T ss_pred             ccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEE
Confidence            45566778999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||++.......       .+..|..      ..+....|.            +.+||.+.+....+..+...  ...+
T Consensus       138 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~--~~~~  215 (321)
T cd05591         138 ADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLY  215 (321)
T ss_pred             eecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCC
Confidence            9999987432111       1111211      122223333            26899999999999998863  4455


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCCC---ChHHHhcCCCCCCccCCCchhhhcCCCCCC--cccCCCCcCCCCCC
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSAR---GVEELKSLGACQFFRGVDWDHIRERPAAIP--VQVKSIDDTSNFDD  212 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~~---~~~~i~~~~~h~ff~~idw~~l~~~~~~~~--~~~~~~~d~~~f~~  212 (351)
                      |.  .++.++.++|.++ ..+|++|++...   .++++.   .||||++++|..+..+...+|  +......+..+|+.
T Consensus       216 p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~---~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (321)
T cd05591         216 PV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIK---QHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQ  289 (321)
T ss_pred             CC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHh---cCCccCCCCHHHHHhCCCCCCCCCCCCCcchhhhcCC
Confidence            54  3789999999994 579999998754   566777   889999999999977654433  45556667777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.94  E-value=1.2e-25  Score=213.96  Aligned_cols=204  Identities=30%  Similarity=0.561  Sum_probs=158.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ...++..|++...+|+||||++||+|..++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus        63 i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL  142 (323)
T cd05615          63 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKI  142 (323)
T ss_pred             hhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEE
Confidence            34466678999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..      ..+....|+            +.+||.+.+....++.+...  ...+
T Consensus       143 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~  220 (323)
T cd05615         143 ADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSY  220 (323)
T ss_pred             eccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCC
Confidence            9999987532111       1111211      122233343            26899999999999988863  4556


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCCcccC-CCCcCCCCCCCCC
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVK-SIDDTSNFDDFPD  215 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~-~~~d~~~f~~~~~  215 (351)
                      |..  ++.+++++|.++ ..+|.+|++.. .+.++++   .||||++++|..+.++...+|+..+ ......+|+.+..
T Consensus       221 p~~--~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T cd05615         221 PKS--LSKEAVSICKGLMTKHPSKRLGCGPEGERDIR---EHAFFRRIDWDKLENREIQPPFKPKVCGKGAENFDKFFT  294 (323)
T ss_pred             Ccc--CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHh---cCcccCCCCHHHHhcCCCCcCccCccCCCchhhcCcccc
Confidence            654  789999999995 57999999875 4566777   8899999999999887654443221 2235777877544

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0599|consensus

Probab=99.94  E-value=2.5e-27  Score=212.47  Aligned_cols=183  Identities=25%  Similarity=0.395  Sum_probs=153.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++-++-.|+++..+|+|+|.|+.|+|+++|...-.++|..++.++.|+..|++|+|.++||||||||+|||++++.++|
T Consensus        84 ~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~  163 (411)
T KOG0599|consen   84 YIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIK  163 (411)
T ss_pred             cEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceE
Confidence            45667778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-ccccccCCCCC-----------------Cccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSHR-TDFYRDLSQAK-----------------PSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~-~~~~~~~~~~~-----------------~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||+++.+..+.+ .+.+++++|..                 ..|.            +.|||......-+.+.|+.+
T Consensus       164 isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG  243 (411)
T KOG0599|consen  164 ISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG  243 (411)
T ss_pred             EeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence            999999998876543 23344444433                 3332            26999998888889999998


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                      +-.+..|...++|.+++|||.++ ..||.+|+.    ++++.   +||||..+-.+..++.
T Consensus       244 kyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~L---aHpff~q~~~~~~r~m  297 (411)
T KOG0599|consen  244 KYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEAL---AHPFFIQIAQQQARQM  297 (411)
T ss_pred             ccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHh---cChHHHHHHHhccccc
Confidence            87777788889999999999995 579999998    45666   8999976655444433

>KOG0588|consensus

Probab=99.94  E-value=2.7e-26  Score=226.19  Aligned_cols=175  Identities=26%  Similarity=0.424  Sum_probs=144.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+++|-.+++..++|+|+||++||.|++++.+++.++|.++..|+.||+.|+.|||..+|+||||||+|+|++..+.+||
T Consensus        74 Vl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKI  153 (786)
T KOG0588|consen   74 VLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKI  153 (786)
T ss_pred             eeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEee
Confidence            45666779999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-cccccccCC------------CCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-RTDFYRDLS------------QAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-~~~~~~~~~------------~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+|..-..+. -...|+.+-            .+.+.|.|            ..||.++|...++.++..  +.++.
T Consensus       154 ADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~--G~f~M  231 (786)
T KOG0588|consen  154 ADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR--GVFEM  231 (786)
T ss_pred             eccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc--CcccC
Confidence            9999986322221 112222222            23344433            689999999999999997  56788


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      |.+  +|.+|+|||.+ |..||.+|+.    .++|.   .|||..+..-...
T Consensus       232 Ps~--Is~eaQdLLr~ml~VDp~~RiT----~~eI~---kHP~l~g~~~~~~  274 (786)
T KOG0588|consen  232 PSN--ISSEAQDLLRRMLDVDPSTRIT----TEEIL---KHPFLSGYTSLPS  274 (786)
T ss_pred             CCc--CCHHHHHHHHHHhccCcccccc----HHHHh---hCchhhcCCCCCh
Confidence            865  89999999999 5689999998    56777   8899987665544

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=3.3e-25  Score=210.98  Aligned_cols=202  Identities=29%  Similarity=0.575  Sum_probs=157.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+||||++||+|..++.+...+.+..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~k  136 (325)
T cd05602          57 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIV  136 (325)
T ss_pred             CCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence            34556678899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|+            +.+||.+.+..+.+..+...  ...
T Consensus       137 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~  214 (325)
T cd05602         137 LTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQ  214 (325)
T ss_pred             EccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CcC
Confidence            99999987532111       1111211      112223343            26899999999999888763  334


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~~f~~  212 (351)
                      +++  .++++++++|.+++ .+|.+|++......++.   .|+||..++|+++......  ..+...+..+..+|+.
T Consensus       215 ~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05602         215 LKP--NITNSARHLLEGLLQKDRTKRLGAKDDFMEIK---NHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDP  286 (325)
T ss_pred             CCC--CCCHHHHHHHHHHcccCHHHCCCCCCCHHHHh---cCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCC
Confidence            443  47899999999954 79999999877777777   8899999999999765443  3345666667777753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.6e-26  Score=212.42  Aligned_cols=200  Identities=35%  Similarity=0.668  Sum_probs=159.0

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      .+..+.+...+|+||||++||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.+|.+||+||
T Consensus        66 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Df  145 (291)
T cd05612          66 LFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDF  145 (291)
T ss_pred             hHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEec
Confidence            34456788899999999999999999988888999999999999999999999999999999999999999999999999


Q ss_pred             CccccCcCCCc----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCC
Q psy17600         88 GLCTGLKKSHR----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPI  145 (351)
Q Consensus        88 Gla~~~~~~~~----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~  145 (351)
                      |+++.......    +..|..      ..+....|.            +..||.+.+..+.++.+...  .+.+|..  +
T Consensus       146 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~--~  221 (291)
T cd05612         146 GFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--KLEFPRH--L  221 (291)
T ss_pred             CcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcCCCcc--C
Confidence            99876543211    111211      112223333            36899999999999998864  4556654  6


Q ss_pred             CHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCC--CcccCCCCcCCCCCCCC
Q psy17600        146 SEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAI--PVQVKSIDDTSNFDDFP  214 (351)
Q Consensus       146 s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~--~~~~~~~~d~~~f~~~~  214 (351)
                      ++.++++|+++ ..+|.+|.+.. ..++++.   .||||+.++|..+..++..+  .|.+....|+.||++++
T Consensus       222 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l---~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  291 (291)
T cd05612         222 DLYAKDLIKKLLVVDRTRRLGNMKNGADDVK---NHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDYP  291 (291)
T ss_pred             CHHHHHHHHHHcCCCHHHccCCccCCHHHHh---cCccccCCCHHHHhcCCCCCCEeCCCCCccccccccCCC
Confidence            89999999995 57999999853 4677777   89999999999987665443  35677888999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.94  E-value=4.6e-25  Score=209.55  Aligned_cols=201  Identities=29%  Similarity=0.552  Sum_probs=155.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||+||+|...+.+...+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus        57 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~k  136 (321)
T cd05603          57 FLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVV  136 (321)
T ss_pred             CccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence            34556677899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|.            +.+||.+.+....+..+...  .+.
T Consensus       137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~  214 (321)
T cd05603         137 LTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--PLQ  214 (321)
T ss_pred             EccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC--CCC
Confidence            99999987532111       1111211      112222332            36899999998899888863  445


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCC--cccCCCCcCCCCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIP--VQVKSIDDTSNFD  211 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~--~~~~~~~d~~~f~  211 (351)
                      +|+  ..+.++.++|.++ ..+|.+|++......++.   .|+||..++|+.+......++  +...+..+...|+
T Consensus       215 ~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (321)
T cd05603         215 LPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIK---NHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFD  285 (321)
T ss_pred             CCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHh---CCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcC
Confidence            554  3688999999995 579999999876677777   899999999999976644333  3455556666665

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=4.2e-25  Score=210.86  Aligned_cols=202  Identities=28%  Similarity=0.541  Sum_probs=157.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+||||++||+|..++.....+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        56 ~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~k  135 (328)
T cd05593          56 FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIK  135 (328)
T ss_pred             CCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEE
Confidence            34556678999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..+      .+....|.            +..||.+.+..+....+..  ..+.
T Consensus       136 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--~~~~  213 (328)
T cd05593         136 ITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EDIK  213 (328)
T ss_pred             EecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--CCcc
Confidence            99999987532111       11122211      12223333            2689999888888887765  3455


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~  212 (351)
                      +|..  ++++++++|.+ |..+|.+|++.. ..+.++.   .||||.+++|..+.....  ++.+...+..+...|+.
T Consensus       214 ~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (328)
T cd05593         214 FPRT--LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIM---RHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDE  286 (328)
T ss_pred             CCCC--CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHh---cCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence            6654  78999999999 558999999763 4566776   889999999999976643  34456677777777763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=4.4e-25  Score=209.51  Aligned_cols=199  Identities=30%  Similarity=0.528  Sum_probs=155.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||.||+|..++.+...+++..+..++.|++.||+|||++||+||||||+||+++.++.++
T Consensus        57 ~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~k  136 (316)
T cd05620          57 FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIK  136 (316)
T ss_pred             CccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence            34556778899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--C-----ccccccc------CCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS--H-----RTDFYRD------LSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~--~-----~~~~~~~------~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++.....  .     .+..|..      ..+....|+|            ..||.+.+..+.++.+...  ...
T Consensus       137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~~  214 (316)
T cd05620         137 IADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TPH  214 (316)
T ss_pred             eCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCC
Confidence            9999998743211  1     1111211      1222233432            6899999998888888753  344


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~  212 (351)
                      +|.  .++.+++++|.++ ..+|.+|++.   .+++.   .||||++++|..+....  +++.+......+.++|+.
T Consensus       215 ~~~--~~~~~~~~li~~~l~~dP~~R~~~---~~~~~---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05620         215 YPR--WITKESKDILEKLFERDPTRRLGV---VGNIR---GHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR  283 (316)
T ss_pred             CCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            554  3789999999995 5799999975   24566   89999999999986654  344456667777888864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.3e-25  Score=211.33  Aligned_cols=201  Identities=35%  Similarity=0.618  Sum_probs=158.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|++...+|+||||++||+|..++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++.++|
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl  137 (330)
T cd05586          58 IVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIAL  137 (330)
T ss_pred             CcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEE
Confidence            44556678999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      +|||+++......       .+..|..+       .+....|.            +..||.+.+..+.++.+...  ...
T Consensus       138 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~  215 (330)
T cd05586         138 CDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--KVR  215 (330)
T ss_pred             ecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--CCC
Confidence            9999986432111       11122211       12222332            36899999999999888763  344


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFD  211 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~  211 (351)
                      +|.. .++++++++|.+ |..+|.+|++....++++.   .||||++++|+.+..+..  +.++......+.++|+
T Consensus       216 ~~~~-~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (330)
T cd05586         216 FPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELK---EHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD  287 (330)
T ss_pred             CCCc-cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHh---cCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcC
Confidence            5543 378999999999 5589999999877788887   889999999999876644  3444566667777775

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.5e-25  Score=210.68  Aligned_cols=206  Identities=39%  Similarity=0.713  Sum_probs=160.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        62 ~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k  141 (333)
T cd05600          62 WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIK  141 (333)
T ss_pred             CCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence            44556678999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC----cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSH----RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~----~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      |+|||++.......    .+..|..+      .+....|.            +.+||.+.+..+.+..+..+...+..|.
T Consensus       142 L~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  221 (333)
T cd05600         142 LTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPV  221 (333)
T ss_pred             EEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCC
Confidence            99999987543211    11222211      12222332            3689999999999988887665555554


Q ss_pred             CC----CCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCCCCCCC
Q psy17600        142 EV----PISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPD  215 (351)
Q Consensus       142 ~~----~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f~~~~~  215 (351)
                      ..    .+|+++.++|.+++.+++.|+..   ++++.   .||||++++|+.+....+++.+.+.+..+...|+++.+
T Consensus       222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s---~~~ll---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (333)
T cd05600         222 YDDPRFNLSDEAWDLITKLINDPSRRFGS---LEDIK---NHPFFKEVDWNELRELKPPFVPELESEIDTGYFDDFEN  293 (333)
T ss_pred             CCccccccCHHHHHHHHHHhhChhhhcCC---HHHHH---hCcccCCCCHHHHhhCCCCCCCCCCCcchhhhccCCCC
Confidence            33    46899999999976666555543   56666   89999999999998767776677777777777766544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=7.5e-25  Score=208.92  Aligned_cols=202  Identities=29%  Similarity=0.528  Sum_probs=152.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|..++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~k  136 (327)
T cd05617          57 FLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIK  136 (327)
T ss_pred             CEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEE
Confidence            45667778999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcC-CC------ccccccc------CCCCCCccc------------CCCCCCCC-------CHHHHHHHHH
Q psy17600         84 LSDFGLCTGLKK-SH------RTDFYRD------LSQAKPSDF------------SYPPFCSE-------NPQETYRKVM  131 (351)
Q Consensus        84 l~DFGla~~~~~-~~------~~~~~~~------~~~~~~~~~------------~~~Pf~~~-------~~~~~~~~i~  131 (351)
                      |+|||+++.... ..      .+..|..      ..+....|+            +..||...       .....++.+.
T Consensus       137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  216 (327)
T cd05617         137 LTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL  216 (327)
T ss_pred             EeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH
Confidence            999999874321 11      1111211      122223333            25788532       2234555555


Q ss_pred             cCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCCCC--CcccCCCCc
Q psy17600        132 SWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPAAI--PVQVKSIDD  206 (351)
Q Consensus       132 ~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~~~--~~~~~~~~d  206 (351)
                      .  ....+|..  ++.++.++|.++ ..+|.+|++..  .+.++++   .||||++++|+.+..++.++  .+.+....+
T Consensus       217 ~--~~~~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~---~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (327)
T cd05617         217 E--KPIRIPRF--LSVKASHVLKGFLNKDPKERLGCQPQTGFSDIK---SHTFFRSIDWDLLEKKQVTPPFKPQITDDYG  289 (327)
T ss_pred             h--CCCCCCCC--CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHH---cCCCCCCCCHHHHHhCCCCCCccCCCCCCcc
Confidence            4  34455553  789999999995 57999999864  4677777   88999999999997775544  455666667


Q ss_pred             CCCCCC
Q psy17600        207 TSNFDD  212 (351)
Q Consensus       207 ~~~f~~  212 (351)
                      ..+|+.
T Consensus       290 ~~~~~~  295 (327)
T cd05617         290 LENFDT  295 (327)
T ss_pred             hhhcCC
Confidence            777764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1e-24  Score=206.51  Aligned_cols=200  Identities=35%  Similarity=0.646  Sum_probs=157.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        55 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl  134 (312)
T cd05585          55 IVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIAL  134 (312)
T ss_pred             EeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEE
Confidence            45556678999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..+      .+....|.            +.+||.+.+..+.++.+..  ..+.+
T Consensus       135 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~--~~~~~  212 (312)
T cd05585         135 CDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ--EPLRF  212 (312)
T ss_pred             EECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc--CCCCC
Confidence            9999987532111       11112111      12223333            2689999999999988886  45566


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~  212 (351)
                      |..  ++++++++|.+ |..+|.+|++.. .+.++.   .||||+.++|..+..+.  ++..+.+.+..+.++|++
T Consensus       213 ~~~--~~~~~~~li~~~L~~dp~~R~~~~-~~~e~l---~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (312)
T cd05585         213 PDG--FDRDAKDLLIGLLSRDPTRRLGYN-GAQEIK---NHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE  282 (312)
T ss_pred             CCc--CCHHHHHHHHHHcCCCHHHcCCCC-CHHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCc
Confidence            654  78999999999 457999999863 456666   89999999999886554  344456667778888865

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0611|consensus

Probab=99.93  E-value=4.8e-26  Score=213.54  Aligned_cols=86  Identities=28%  Similarity=0.524  Sum_probs=82.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++-.|..|++.+++.|||||..+|+|++++.+.+.++|.+++.++.||+.|+.|||.++++|||||.+|||+|.++++||
T Consensus       115 II~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKI  194 (668)
T KOG0611|consen  115 IIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKI  194 (668)
T ss_pred             eeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeee
Confidence            45567789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCcc
Q psy17600         85 SDFGLC   90 (351)
Q Consensus        85 ~DFGla   90 (351)
                      +||||+
T Consensus       195 ADFGLS  200 (668)
T KOG0611|consen  195 ADFGLS  200 (668)
T ss_pred             eccchh
Confidence            999996

>KOG0033|consensus

Probab=99.93  E-value=7.7e-26  Score=200.24  Aligned_cols=178  Identities=24%  Similarity=0.413  Sum_probs=144.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---G   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~   80 (351)
                      ++|.++-+.+.....|||+|++.||+|..-|.++..++|..+-.|+.||+.||.|||.+||||||+||+|+|+.+.   .
T Consensus        71 ~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A  150 (355)
T KOG0033|consen   71 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGA  150 (355)
T ss_pred             cEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCC
Confidence            5778888899999999999999999999877776778999999999999999999999999999999999999643   4


Q ss_pred             cEEEEecCccccCcCCC------ccccc------ccCCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSH------RTDFY------RDLSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~------~~~~~------~~~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      -+||+|||+|+.+..+.      .+..|      ..-.+.++.|.|            ++||.+++...+|+.|+.+.-.
T Consensus       151 ~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd  230 (355)
T KOG0033|consen  151 AVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD  230 (355)
T ss_pred             ceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC
Confidence            68999999998776322      12222      223455666653            8999999999999999986555


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      +.-|....+|++|++||++ |..||.+|+..    .|+.   +|||.++-+--
T Consensus       231 ~~~~~w~~is~~Ak~LvrrML~~dP~kRIta----~EAL---~HpWi~~r~~~  276 (355)
T KOG0033|consen  231 YPSPEWDTVTPEAKSLIRRMLTVNPKKRITA----DEAL---KHPWICNRERV  276 (355)
T ss_pred             CCCcccCcCCHHHHHHHHHHhccChhhhccH----HHHh---CCchhcchHHH
Confidence            5555556799999999999 66899999983    4555   88998764443

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.93  E-value=9e-25  Score=208.03  Aligned_cols=201  Identities=28%  Similarity=0.506  Sum_probs=157.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|++...+|+||||++||+|..++.+...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  136 (323)
T cd05595          57 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI  136 (323)
T ss_pred             CcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEe
Confidence            45566788999999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..+.      +....|.            +..||.+.+....+..+..  ....+
T Consensus       137 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~--~~~~~  214 (323)
T cd05595         137 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--EEIRF  214 (323)
T ss_pred             cccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCCCC
Confidence            9999987532111       111222221      1222332            2589999998888888875  34456


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~  212 (351)
                      |..  ++++++++|.+ |..+|.+|++.. ..+.++.   .||||.+++|..+..+..  ++.+...+..+...|++
T Consensus       215 p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (323)
T cd05595         215 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM---EHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD  286 (323)
T ss_pred             CCC--CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCc
Confidence            654  78999999999 557999999764 3466666   889999999999976653  34456777788888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=9.2e-25  Score=207.42  Aligned_cols=199  Identities=31%  Similarity=0.571  Sum_probs=156.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+||||++||+|..++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~k  136 (316)
T cd05619          57 FLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIK  136 (316)
T ss_pred             cCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence            34556778899999999999999999999998877899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..+      .+....|.            +..||.+.+..+.++.+...  ...
T Consensus       137 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~  214 (316)
T cd05619         137 IADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPC  214 (316)
T ss_pred             EccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCC
Confidence            99999987432111       11112211      12223333            26899999998888887753  334


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC--CCCCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~--~~~~~~~~~~~~d~~~f~~  212 (351)
                      +|.  .++.+++++|.+ |..+|.+|++..   ++++   .||||+.++|..+..+  +++..+..++..+.++|+.
T Consensus       215 ~~~--~~~~~~~~li~~~l~~~P~~R~~~~---~~l~---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05619         215 YPR--WLTREAKDILVKLFVREPERRLGVK---GDIR---QHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDK  283 (316)
T ss_pred             CCc--cCCHHHHHHHHHHhccCHhhcCCCh---HHHH---cCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcCh
Confidence            554  378999999999 557999999863   3566   8999999999998765  4445567788889999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=1.7e-24  Score=205.59  Aligned_cols=199  Identities=32%  Similarity=0.577  Sum_probs=155.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+||||++||+|..++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~k  136 (316)
T cd05592          57 FLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIK  136 (316)
T ss_pred             CccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEE
Confidence            44556677889999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+......       .+..|..      ..+....|.|            ..||.+.+..+.+..+...  ...
T Consensus       137 L~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~  214 (316)
T cd05592         137 IADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPH  214 (316)
T ss_pred             EccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCC
Confidence            99999987532211       1112221      1122333432            6899999999888888753  334


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~~f~~  212 (351)
                      +|.  .++.++.++|.++ ..+|.+|++.   .+++.   .||||+.++|..+.++..+  +.+..++..+.++|+.
T Consensus       215 ~~~--~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05592         215 FPR--WISKEAKDCLSKLFERDPTKRLGV---DGDIR---QHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDR  283 (316)
T ss_pred             CCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHH---cCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            454  3789999999994 5799999975   24555   8999999999998766444  3446777788888875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.93  E-value=1.6e-24  Score=206.27  Aligned_cols=200  Identities=30%  Similarity=0.517  Sum_probs=155.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|++...+|+|||||+||+|...+.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        64 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL  142 (324)
T cd05589          64 LVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKI  142 (324)
T ss_pred             hhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEe
Confidence            34456678899999999999999999988754 57999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC--c-----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH--R-----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~--~-----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......  .     +..|..      ..+....|+            +..||.+.+..+.+..+...  ...+
T Consensus       143 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~  220 (324)
T cd05589         143 ADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND--EVRY  220 (324)
T ss_pred             CcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCC
Confidence            9999987432111  1     111211      112223343            26899999999888888763  3456


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~  212 (351)
                      |..  +++++.++|.+ |..+|.+|++.+. .+.++.   .||||++++|..+..+.  ++..+.+....|.++|+.
T Consensus       221 p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  292 (324)
T cd05589         221 PRF--LSREAISIMRRLLRRNPERRLGSGEKDAEDVK---KQPFFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDE  292 (324)
T ss_pred             CCC--CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHh---hCCCcCCCCHHHHHhCCCCcCccCCCCCcchhhhcCc
Confidence            654  78999999999 5579999998753 567777   88999999999987654  334456677888888864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=2.4e-24  Score=204.95  Aligned_cols=201  Identities=35%  Similarity=0.633  Sum_probs=155.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|++...+|+||||++||+|.+++.+.+.+.+..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl  141 (323)
T cd05584          62 IVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKL  141 (323)
T ss_pred             hhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEE
Confidence            34556678899999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||+++......       .+..|..+.      +....|.            +.+||.+.+.......+...  ...+
T Consensus       142 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--~~~~  219 (323)
T cd05584         142 TDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--KLNL  219 (323)
T ss_pred             eeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCC
Confidence            9999986432111       111122211      1222332            36899999988888888764  3455


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCC--cccCCCCcCCCCCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIP--VQVKSIDDTSNFDD  212 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~--~~~~~~~d~~~f~~  212 (351)
                      |+.  ++++++++|.+ +..+|++|+++. ..++++.   .||||+..+|+.+......+|  +...+..+.+.|+.
T Consensus       220 ~~~--~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (323)
T cd05584         220 PPY--LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQ---SHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDS  291 (323)
T ss_pred             CCC--CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHh---cCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCc
Confidence            553  78999999999 457999999764 3466666   899999999999976654433  34556666666653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0578|consensus

Probab=99.93  E-value=7.3e-26  Score=220.22  Aligned_cols=77  Identities=35%  Similarity=0.670  Sum_probs=71.9

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+.+|+||||++||+|.+.+.. ..++|.+...++.+++.||+|||.+||||||||.+|||++.+|.+||+|||+|..
T Consensus       342 ~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaq  418 (550)
T KOG0578|consen  342 GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQ  418 (550)
T ss_pred             cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeec
Confidence            4789999999999999998865 4599999999999999999999999999999999999999999999999999854

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.93  E-value=2.1e-24  Score=205.43  Aligned_cols=201  Identities=29%  Similarity=0.516  Sum_probs=156.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..|++...+|+||||++||+|..++.+...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+|
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~k  136 (325)
T cd05594          57 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK  136 (325)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEE
Confidence            445567789999999999999999999999888889999999999999999999997 8999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|.            +..||.+.+....+..+..  ..+.
T Consensus       137 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~--~~~~  214 (325)
T cd05594         137 ITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIR  214 (325)
T ss_pred             EecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc--CCCC
Confidence            99999986432111       1111211      122223332            2689999998888888775  3455


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCC--CcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAI--PVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~--~~~~~~~~d~~~f~~  212 (351)
                      +|..  ++++++++|.+ |..+|.+|++.. ..+.++.   .||||++++|..+..+...+  .+...+..+...|++
T Consensus       215 ~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
T cd05594         215 FPRT--LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIM---QHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDE  287 (325)
T ss_pred             CCCC--CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHh---cCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence            6654  78999999999 558999999753 3566666   88999999999997765433  345666777777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=2.2e-24  Score=205.91  Aligned_cols=202  Identities=30%  Similarity=0.541  Sum_probs=150.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||+||+|..++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~k  136 (329)
T cd05588          57 FLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIK  136 (329)
T ss_pred             CCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence            35566778999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcC-CC------ccccccc------CCCCCCcccC------------CCCCCCC---------CHHHHHHH
Q psy17600         84 LSDFGLCTGLKK-SH------RTDFYRD------LSQAKPSDFS------------YPPFCSE---------NPQETYRK  129 (351)
Q Consensus        84 l~DFGla~~~~~-~~------~~~~~~~------~~~~~~~~~~------------~~Pf~~~---------~~~~~~~~  129 (351)
                      |+|||+++.... ..      .+..|..      ..+....|+|            ..||...         .....++.
T Consensus       137 L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~  216 (329)
T cd05588         137 LTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV  216 (329)
T ss_pred             ECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH
Confidence            999999874211 11      1111211      1222233432            5788521         12234555


Q ss_pred             HHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCCCC--CcccCCC
Q psy17600        130 VMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPAAI--PVQVKSI  204 (351)
Q Consensus       130 i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~~~--~~~~~~~  204 (351)
                      +..  ..+.+|..  ++.++.++|.+ |..+|.+|++..  .+.+++.   .||||+.++|+.+...+..+  .+.+...
T Consensus       217 ~~~--~~~~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~---~hp~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (329)
T cd05588         217 ILE--KQIRIPRS--LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK---SHPFFRNIDWDLLEQKQVLPPYKPNIESD  289 (329)
T ss_pred             HHc--CCCCCCCC--CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh---cCCCCCCCCHHHHHhCCCCCCccccCCCc
Confidence            554  34455653  78999999999 557999999854  3567777   89999999999997664433  3456666


Q ss_pred             CcCCCCCC
Q psy17600        205 DDTSNFDD  212 (351)
Q Consensus       205 ~d~~~f~~  212 (351)
                      .+..+|+.
T Consensus       290 ~~~~~~~~  297 (329)
T cd05588         290 RDLDNFDP  297 (329)
T ss_pred             chhhhcCC
Confidence            67777764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=1.8e-24  Score=205.39  Aligned_cols=202  Identities=30%  Similarity=0.566  Sum_probs=156.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+||||++||+|..++.+.+.+++..+..++.|++.||.|||+++|+||||||+||+++.++.+|
T Consensus        57 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~k  136 (318)
T cd05570          57 FLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIK  136 (318)
T ss_pred             CccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEE
Confidence            34556667889999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|.            +..||.+.+....+..+...  ...
T Consensus       137 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~~  214 (318)
T cd05570         137 IADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--EVR  214 (318)
T ss_pred             ecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCC
Confidence            99999986421111       1111111      112222332            26899999988888888763  345


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~~f~~  212 (351)
                      +|..  ++.+++++|.+ |..+|.+|++... ...++.   .||||+.++|..+..+...  ..+.+.+..+.++|+.
T Consensus       215 ~~~~--~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (318)
T cd05570         215 YPRW--LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIK---GHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDD  287 (318)
T ss_pred             CCCc--CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHh---cCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            5543  78999999999 5589999998743 345565   8999999999988766544  3456777788888874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.92  E-value=2.1e-24  Score=205.77  Aligned_cols=202  Identities=32%  Similarity=0.604  Sum_probs=150.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|.+++.+...+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        66 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~k  145 (332)
T cd05614          66 FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVV  145 (332)
T ss_pred             CcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEE
Confidence            34556677899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--------cccccccC-------CCCCCccc------------CCCCCCCC----CHHHHHHHHHc
Q psy17600         84 LSDFGLCTGLKKSH--------RTDFYRDL-------SQAKPSDF------------SYPPFCSE----NPQETYRKVMS  132 (351)
Q Consensus        84 l~DFGla~~~~~~~--------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~----~~~~~~~~i~~  132 (351)
                      |+|||+++......        .+..|..+       .+....|.            +..||...    ........+..
T Consensus       146 l~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~  225 (332)
T cd05614         146 LTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK  225 (332)
T ss_pred             EeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc
Confidence            99999987542211        11112111       12223333            25788643    33344455554


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCC
Q psy17600        133 WRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTS  208 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~  208 (351)
                      .  ...+|.  .++++++++|.+ |..+|++|++.+ ..++++.   .||||++++|..+...+..  ..+......+..
T Consensus       226 ~--~~~~~~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l---~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (332)
T cd05614         226 C--DPPFPS--FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIK---EHPFFKGLDWEALALRKVNPPFRPSIRNELDVG  298 (332)
T ss_pred             C--CCCCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHH---cCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhh
Confidence            2  233443  378999999999 557999999764 4566777   8999999999998765443  445566677777


Q ss_pred             CCCC
Q psy17600        209 NFDD  212 (351)
Q Consensus       209 ~f~~  212 (351)
                      +|.+
T Consensus       299 ~~~~  302 (332)
T cd05614         299 NFAE  302 (332)
T ss_pred             hcCc
Confidence            7753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0580|consensus

Probab=99.92  E-value=2.4e-25  Score=196.42  Aligned_cols=169  Identities=31%  Similarity=0.472  Sum_probs=144.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLM--KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++.+|..|-|..++||++||.++|+|+..|.  +...++|..+..|+.|++.|+.|||.++|||||+||+|+|++..|.
T Consensus        83 nilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~  162 (281)
T KOG0580|consen   83 NILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGE  162 (281)
T ss_pred             cHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCC
Confidence            34567788999999999999999999999998  6678999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCcccccccCCCCCCc-----------cc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         82 IKLSDFGLCTGLKKSHRTDFYRDLSQAKPS-----------DF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~-----------~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      +|++|||.+-.-..+.+...+++..+..++           |.            +.+||.+.+..++|++|..  ..+.
T Consensus       163 lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k--~~~~  240 (281)
T KOG0580|consen  163 LKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK--VDLK  240 (281)
T ss_pred             eeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH--cccc
Confidence            999999998776666677777665554432           22            3799999999999999997  4577


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      +|..  +|.+|+|+|.+++ .+|.+|+..    .++.   .|||..
T Consensus       241 ~p~~--is~~a~dlI~~ll~~~p~~r~~l----~~v~---~hpwI~  277 (281)
T KOG0580|consen  241 FPST--ISGGAADLISRLLVKNPIERLAL----TEVM---DHPWIV  277 (281)
T ss_pred             CCcc--cChhHHHHHHHHhccCccccccH----HHHh---hhHHHH
Confidence            8854  8999999999965 799999873    4555   889864

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.92  E-value=1.1e-23  Score=201.09  Aligned_cols=202  Identities=28%  Similarity=0.526  Sum_probs=148.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|++...+|+|||||+||+|..++.+...+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        57 ~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~k  136 (329)
T cd05618          57 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK  136 (329)
T ss_pred             cCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEE
Confidence            34556667899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCcccC------------CCCCCC---------CCHHHHHHH
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDFS------------YPPFCS---------ENPQETYRK  129 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~~------------~~Pf~~---------~~~~~~~~~  129 (351)
                      |+|||+++......       .+..|..      ..+....|+|            ..||..         ......++.
T Consensus       137 L~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~  216 (329)
T cd05618         137 LTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  216 (329)
T ss_pred             EeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH
Confidence            99999987532111       1111211      1122233432            578842         112234455


Q ss_pred             HHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCCCC--CcccCCC
Q psy17600        130 VMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPAAI--PVQVKSI  204 (351)
Q Consensus       130 i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~~~--~~~~~~~  204 (351)
                      +..  ....+|..  ++.+++++|.++ ..+|.+|++..  .+.+++.   .||||++++|+.+.++...+  .+...+.
T Consensus       217 i~~--~~~~~p~~--~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~---~hp~f~~~~~~~~~~~~~~~~~~~~~~~~  289 (329)
T cd05618         217 ILE--KQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ---GHPFFRNVDWDLMEQKQVVPPFKPNISGE  289 (329)
T ss_pred             Hhc--CCCCCCCC--CCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHh---cCCCCCCCCHHHHHcCCCCcCccCCCCCc
Confidence            554  34556653  789999999994 57999999863  4567777   89999999999887664433  3444555


Q ss_pred             CcCCCCCC
Q psy17600        205 DDTSNFDD  212 (351)
Q Consensus       205 ~d~~~f~~  212 (351)
                      .+..+|++
T Consensus       290 ~~~~~~~~  297 (329)
T cd05618         290 FGLDNFDA  297 (329)
T ss_pred             ccchhcCc
Confidence            55555543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0585|consensus

Probab=99.92  E-value=5.5e-25  Score=210.00  Aligned_cols=169  Identities=28%  Similarity=0.484  Sum_probs=130.9

Q ss_pred             EeeeEEEecC--CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDP--INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      |.+.....|+  .++|||+|||..|.+...=.....+++.+|+.|+..++.||+|||.+|||||||||.|+|++.+|++|
T Consensus       171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             eEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence            3444444443  68999999999999865433333389999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC------------CcccccccCC----------CCCCccc------------CCCCCCCCCHHHHHHH
Q psy17600         84 LSDFGLCTGLKKS------------HRTDFYRDLS----------QAKPSDF------------SYPPFCSENPQETYRK  129 (351)
Q Consensus        84 l~DFGla~~~~~~------------~~~~~~~~~~----------~~~~~~~------------~~~Pf~~~~~~~~~~~  129 (351)
                      |+|||.+.....+            ..|..+..+.          .+...|.            +.-||.++...++|.+
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K  330 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK  330 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence            9999998754211            1121111110          0111222            3689999999999999


Q ss_pred             HHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        130 VMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       130 i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      |.+  ..+.||....++++++|+|.+ |++||..|++.    .+|+   .|||..
T Consensus       331 Ivn--~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l----~~ik---~Hpwvt  376 (576)
T KOG0585|consen  331 IVN--DPLEFPENPEINEDLKDLIKRLLEKDPEQRITL----PDIK---LHPWVT  376 (576)
T ss_pred             Hhc--CcccCCCcccccHHHHHHHHHHhhcChhheeeh----hhhe---ecceec
Confidence            997  789999998899999999999 67999999984    3555   889974

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.92  E-value=1.5e-23  Score=198.89  Aligned_cols=188  Identities=37%  Similarity=0.632  Sum_probs=147.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+||||++||+|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        59 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k  138 (318)
T cd05582          59 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIK  138 (318)
T ss_pred             CcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEE
Confidence            34556678899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++.......       +..|..      ..+....|.            +..||.+.+..+.+..+...  ...
T Consensus       139 L~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~--~~~  216 (318)
T cd05582         139 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--KLG  216 (318)
T ss_pred             EeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC--CCC
Confidence            999999875432211       111111      112222332            26899999988888888763  344


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      +|..  ++++++++|.+ |..+|.+|.+... ..+++.   .||||+.++|..+.+++..++
T Consensus       217 ~p~~--~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  273 (318)
T cd05582         217 MPQF--LSPEAQSLLRALFKRNPANRLGAGPDGVEEIK---RHPFFSTIDWNKLYRREIKPP  273 (318)
T ss_pred             CCCC--CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHh---CCCCcCCCCHHHHHhcCCCCC
Confidence            5543  78999999999 4579999998653 356666   899999999999876654433

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.92  E-value=6.9e-24  Score=198.04  Aligned_cols=190  Identities=23%  Similarity=0.418  Sum_probs=142.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +.+..+..|.+...+|+|||||+||+|..++...  ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.
T Consensus        61 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~  140 (285)
T cd05631          61 FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH  140 (285)
T ss_pred             cEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC
Confidence            4566677888999999999999999999887543  35899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCC------cccccccC------CCCCCccc------------CCCCCCCCCHHH----HHHHHHcC
Q psy17600         82 IKLSDFGLCTGLKKSH------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQE----TYRKVMSW  133 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~----~~~~i~~~  133 (351)
                      ++|+|||++.......      .+..|..+      .+....|.            +.+||.+.+...    ....+.. 
T Consensus       141 ~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-  219 (285)
T cd05631         141 IRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-  219 (285)
T ss_pred             EEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-
Confidence            9999999987643221      11122211      22223343            268998765432    2223322 


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCCcc
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQ  200 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~  200 (351)
                       ....++.  .+|+++.++|.+ |..+|.+|++.. .+++++.   .||||++++|+.+.++..++|+.
T Consensus       220 -~~~~~~~--~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~---~h~~~~~~~~~~~~~~~~~~~~~  282 (285)
T cd05631         220 -DQEEYSE--KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVK---QHPIFKNINFKRLEANMLEPPFC  282 (285)
T ss_pred             -ccccCCc--cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHh---cCHhhcCCCHHHHHhCcCCcCCC
Confidence             2233444  378999999999 557999999864 4577887   88999999999999886665543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0604|consensus

Probab=99.91  E-value=2.6e-24  Score=195.32  Aligned_cols=165  Identities=26%  Similarity=0.482  Sum_probs=129.7

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---CCcEEEE
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---RGHIKLS   85 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---~~~~kl~   85 (351)
                      +|+....|-+|||.++||+|++.+..++.  |.|.++..++.||..|+.|||+.+|.||||||||+|...   +..+||+
T Consensus       127 s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLt  206 (400)
T KOG0604|consen  127 SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLT  206 (400)
T ss_pred             hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEec
Confidence            46777889999999999999999988765  999999999999999999999999999999999999864   4578999


Q ss_pred             ecCccccCcC------CCcccccccCC------CCCCccc------------CCCCCCCCCH----HHHHHHHHcCCCce
Q psy17600         86 DFGLCTGLKK------SHRTDFYRDLS------QAKPSDF------------SYPPFCSENP----QETYRKVMSWRDTL  137 (351)
Q Consensus        86 DFGla~~~~~------~~~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~----~~~~~~i~~~~~~~  137 (351)
                      |||+|+....      ...|.+|..+.      |.++.|.            +||||++..-    ..+.++|..++  +
T Consensus       207 DfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq--y  284 (400)
T KOG0604|consen  207 DFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ--Y  284 (400)
T ss_pred             ccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC--c
Confidence            9999986542      12344554332      3444443            3899998654    44567888754  5


Q ss_pred             eCCC--CCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 VFPP--EVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ~~p~--~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .||.  ...+|++++|+|++|+ .+|.+||.    .+++.   .|||..+
T Consensus       285 ~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m---~hpwi~~  327 (400)
T KOG0604|consen  285 EFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVM---DHPWINQ  327 (400)
T ss_pred             cCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhh---cCchhcc
Confidence            5554  4568999999999976 59999998    34555   8899754

>KOG0589|consensus

Probab=99.91  E-value=1.7e-24  Score=208.84  Aligned_cols=90  Identities=28%  Similarity=0.455  Sum_probs=80.4

Q ss_pred             ceEeeeEEEecCCc-EEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          4 YACLKQLRMSDPIN-LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~-lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      +++...-.|...+. ++|||+||+||+|.+.+.+.  ..|+|+.+..|+.|++.|+.|||+++|+|||||+.||+++.++
T Consensus        64 ~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~  143 (426)
T KOG0589|consen   64 NIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK  143 (426)
T ss_pred             CeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC
Confidence            45555556777777 99999999999999999754  4689999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccC
Q psy17600         81 HIKLSDFGLCTGL   93 (351)
Q Consensus        81 ~~kl~DFGla~~~   93 (351)
                      .+||.|||+|+.+
T Consensus       144 ~VkLgDfGlaK~l  156 (426)
T KOG0589|consen  144 KVKLGDFGLAKIL  156 (426)
T ss_pred             ceeecchhhhhhc
Confidence            9999999998754

>KOG0597|consensus

Probab=99.91  E-value=9.3e-25  Score=211.97  Aligned_cols=88  Identities=30%  Similarity=0.521  Sum_probs=82.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++.++-.|++..++|+|.|||.| +|+.+|...+.++|+.++.+..+++.||.|||+++|+|||+||.|||++..|++|+
T Consensus        63 iv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~Kl  141 (808)
T KOG0597|consen   63 IVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKL  141 (808)
T ss_pred             hhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceee
Confidence            44556689999999999999987 99999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||+|+.+
T Consensus       142 cdFg~Ar~m  150 (808)
T KOG0597|consen  142 CDFGLARAM  150 (808)
T ss_pred             chhhhhhhc
Confidence            999998644

>KOG0661|consensus

Probab=99.90  E-value=1.7e-24  Score=206.71  Aligned_cols=88  Identities=30%  Similarity=0.529  Sum_probs=77.1

Q ss_pred             eEeeeEEEecCC-cEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPI-NLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~-~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ++.++-.+-|.+ .||+|||||. -+|+++++.+ ..|++..++.|+.||+.||.|+|.+|+.|||+||||||+.....+
T Consensus        71 iikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~i  149 (538)
T KOG0661|consen   71 IIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVI  149 (538)
T ss_pred             chhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccccee
Confidence            344455566666 9999999996 5899999754 578999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+|+.+
T Consensus       150 KiaDFGLARev  160 (538)
T KOG0661|consen  150 KIADFGLAREV  160 (538)
T ss_pred             Eeccccccccc
Confidence            99999998754

>KOG0032|consensus

Probab=99.90  E-value=6.7e-23  Score=198.75  Aligned_cols=173  Identities=29%  Similarity=0.442  Sum_probs=141.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC----
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR----   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~----   79 (351)
                      ..+.++..|++...+|+|||+|.||+|++.+.+. .++|..+..++.|++.|+.|||+.||+||||||+|+|+...    
T Consensus        97 niv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~  175 (382)
T KOG0032|consen   97 NIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGS  175 (382)
T ss_pred             CEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCC
Confidence            5677888999999999999999999999999876 49999999999999999999999999999999999999533    


Q ss_pred             CcEEEEecCccccCcCCCc-ccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCC
Q psy17600         80 GHIKLSDFGLCTGLKKSHR-TDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        80 ~~~kl~DFGla~~~~~~~~-~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                      +.+|++|||++........ ...+++..           +....|.            +++||.+.+...++..|..+..
T Consensus       176 ~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~  255 (382)
T KOG0032|consen  176 GRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF  255 (382)
T ss_pred             CcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC
Confidence            5799999999987655221 12222222           2333333            2799999999999999998776


Q ss_pred             ceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        136 TLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .+..+....+|..|+|+|++ |..+|.+|+.    +.++.   .|||.++
T Consensus       256 ~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L---~HpWi~~  298 (382)
T KOG0032|consen  256 DFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQAL---QHPWIKS  298 (382)
T ss_pred             CCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHh---cCccccC
Confidence            66677777899999999999 5589999998    45666   6899664

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.90  E-value=1e-22  Score=189.69  Aligned_cols=188  Identities=23%  Similarity=0.466  Sum_probs=138.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      .+.....|.+...+|+||||++||+|...+..    ...+++..+..++.|++.||.|||+++|+||||||+||+++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~  134 (280)
T cd05608          55 IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG  134 (280)
T ss_pred             EeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            44556678888999999999999999887743    34689999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccCcCCCc-------cccccc------CCCCCCccc------------CCCCCCCCCH----HHHHHHHH
Q psy17600         81 HIKLSDFGLCTGLKKSHR-------TDFYRD------LSQAKPSDF------------SYPPFCSENP----QETYRKVM  131 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~----~~~~~~i~  131 (351)
                      .++|+|||++..+.....       +..|..      ..+....|.            +..||...+.    ......+.
T Consensus       135 ~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  214 (280)
T cd05608         135 NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL  214 (280)
T ss_pred             CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc
Confidence            999999999875432211       111111      112222332            2578876543    22333333


Q ss_pred             cCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        132 SWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       132 ~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                      .  ....+|.  .+++++++++.++ ..+|.+|++..+ .++++.   .||||++++|..+.....++|+
T Consensus       215 ~--~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l---~h~~~~~~~~~~~~~~~~~~~~  277 (280)
T cd05608         215 N--DSVTYPD--KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLR---THPLFRDLNWRQLEAGMLPPPF  277 (280)
T ss_pred             c--cCCCCcc--cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHh---cChhhhcCCHhHHhhccCCCCC
Confidence            2  2334443  3789999999994 589999998754 567777   8999999999999777666554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.90  E-value=2.8e-22  Score=187.37  Aligned_cols=202  Identities=36%  Similarity=0.671  Sum_probs=155.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||+++|+|.+++.+.+.+++..+..++.|++.||.|||++|++|+||+|.||+++.++.+||
T Consensus        63 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl  142 (290)
T cd05580          63 LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKI  142 (290)
T ss_pred             ccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEE
Confidence            34445567888999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc----ccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCC
Q psy17600         85 SDFGLCTGLKKSHR----TDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE  142 (351)
Q Consensus        85 ~DFGla~~~~~~~~----~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  142 (351)
                      +|||++........    +..|..+.      .....|.            +..||...+....++.+..  ....+|..
T Consensus       143 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~  220 (290)
T cd05580         143 TDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--GKVRFPSF  220 (290)
T ss_pred             eeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCccCCcc
Confidence            99999876543211    11111111      1122232            3689988888888888775  34555654


Q ss_pred             CCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcCCCCCCC
Q psy17600        143 VPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDTSNFDDF  213 (351)
Q Consensus       143 ~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~~~f~~~  213 (351)
                        ++...+++|.+ +..+|.+|.... ..++++.   .||||+.++|..+.....+  +.+..+...|.+.|++|
T Consensus       221 --~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (290)
T cd05580         221 --FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK---NHPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY  290 (290)
T ss_pred             --CCHHHHHHHHHHccCCHHHccCcccCCHHHHH---cCcccccCCHHHHhhccCCCCccCCCCCccccccccCC
Confidence              68999999999 557999998763 4567777   8899999999999766443  33445566777777654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0192|consensus

Probab=99.89  E-value=4.1e-23  Score=198.78  Aligned_cols=76  Identities=37%  Similarity=0.695  Sum_probs=72.1

Q ss_pred             cEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCCCCcEEecCCC-cEEEEecCcccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLG-FIHRDIKPDNLLLDARG-HIKLSDFGLCTG   92 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iihrDlkp~Nill~~~~-~~kl~DFGla~~   92 (351)
                      .+.|||||+++|+|.+++.+  ...++...+..++.+|+.|++|||+++ ||||||||+|||++.++ ++||+|||+++.
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~  193 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE  193 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence            69999999999999999987  578999999999999999999999999 99999999999999998 999999999753

>KOG4721|consensus

Probab=99.89  E-value=3e-24  Score=208.44  Aligned_cols=75  Identities=27%  Similarity=0.422  Sum_probs=71.3

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      -++||||||+.|.|+..|+....+.......+..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++
T Consensus       186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~  260 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSK  260 (904)
T ss_pred             eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchH
Confidence            358999999999999999988889999999999999999999999999999999999999999999999999865

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.89  E-value=6.1e-22  Score=184.11  Aligned_cols=190  Identities=25%  Similarity=0.438  Sum_probs=139.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +.+..+..|++...+|+||||++||+|..++....  .+++..+..++.|++.||+|||++||+||||||+||+++.++.
T Consensus        54 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~  133 (277)
T cd05607          54 FIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGN  133 (277)
T ss_pred             cEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCC
Confidence            34556667899999999999999999998886543  5788888999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCC------ccccccc------CCCCCCccc------------CCCCCCCCCH----HHHHHHHHcC
Q psy17600         82 IKLSDFGLCTGLKKSH------RTDFYRD------LSQAKPSDF------------SYPPFCSENP----QETYRKVMSW  133 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~----~~~~~~i~~~  133 (351)
                      ++|+|||++.......      .+..|..      ..+....|.            +..||.+...    ..+...+...
T Consensus       134 ~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~  213 (277)
T cd05607         134 CRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED  213 (277)
T ss_pred             EEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc
Confidence            9999999987543221      1111211      112222332            2578875432    3344444432


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        134 RDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                        .+.++. ..++++++++|.++ ..+|.+|.+.....+++.   .||||++++|..+..+..++|+
T Consensus       214 --~~~~~~-~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~---~h~~f~~~~~~~~~~~~~~~~~  274 (277)
T cd05607         214 --EVKFEH-QNFTEESKDICRLFLAKKPEDRLGSREKNDDPR---KHEFFKTINFPRLEAGLIPPPF  274 (277)
T ss_pred             --cccccc-ccCCHHHHHHHHHHhccCHhhCCCCccchhhhh---cChhhcCCCHHHHhcCcCCCCC
Confidence              222222 24789999999994 579999999865555666   8999999999999887666554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0600|consensus

Probab=99.89  E-value=5.1e-23  Score=197.89  Aligned_cols=76  Identities=32%  Similarity=0.604  Sum_probs=70.6

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ...+|||+|||+ -||.-++... -.|++.+++.|+.|++.||+|||.+||+|||||..|||||.+|.+||+|||||+
T Consensus       190 ~~siYlVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  190 SGSIYLVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLAR  266 (560)
T ss_pred             CceEEEEEeccc-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecccccee
Confidence            568999999997 5898888763 379999999999999999999999999999999999999999999999999986

>KOG0593|consensus

Probab=99.89  E-value=7.5e-24  Score=192.61  Aligned_cols=83  Identities=31%  Similarity=0.457  Sum_probs=71.5

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      .|....++|||+|||..--|..+-+....++++.++.|+.|++.|+.|||++++|||||||||||++.+|.+||||||+|
T Consensus        69 VFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFA  148 (396)
T KOG0593|consen   69 VFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFA  148 (396)
T ss_pred             HHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhh
Confidence            34556789999999986545444444457899999999999999999999999999999999999999999999999998


Q ss_pred             ccC
Q psy17600         91 TGL   93 (351)
Q Consensus        91 ~~~   93 (351)
                      +.+
T Consensus       149 R~L  151 (396)
T KOG0593|consen  149 RTL  151 (396)
T ss_pred             Hhh
Confidence            654

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=8.5e-22  Score=183.89  Aligned_cols=191  Identities=26%  Similarity=0.439  Sum_probs=141.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++..+..+.+...+|+||||++||+|..++...  ..+++..+..++.|++.|+.|||+++++||||||+||+++.++.
T Consensus        61 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  140 (285)
T cd05605          61 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH  140 (285)
T ss_pred             CEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC
Confidence            4555667788889999999999999999888653  45899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcC--CC
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSW--RD  135 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~--~~  135 (351)
                      ++|+|||++........      +..|..+      .+....|.            +..||.+.+.......+...  ..
T Consensus       141 ~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~  220 (285)
T cd05605         141 IRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED  220 (285)
T ss_pred             EEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc
Confidence            99999999876432211      1112111      12222333            26899887664433332211  12


Q ss_pred             ceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        136 TLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                      ...+|..  +++..+++|.+ +..+|.+|.+.. ..++++.   .||||+..+|..+.++..++|+
T Consensus       221 ~~~~~~~--~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~  281 (285)
T cd05605         221 QEEYSEK--FSEAARSICRQLLTKDPGFRLGCRGEGAEEVK---AHPFFRTANFKRLEAGMLEPPF  281 (285)
T ss_pred             ccccCcc--cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHh---cCcCccCCCHHHHhhCCCCCCC
Confidence            2334433  78899999999 558999999864 3566776   8999999999999887666554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0582|consensus

Probab=99.88  E-value=1.5e-22  Score=192.24  Aligned_cols=88  Identities=31%  Similarity=0.591  Sum_probs=80.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ++-.+++|-....||+||-||.+|++.+++...  ..++|..+..++.+++.||.|||++|-||||+|+.||||+.+|.|
T Consensus        86 Iv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~V  165 (516)
T KOG0582|consen   86 IVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTV  165 (516)
T ss_pred             cceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcE
Confidence            456778899999999999999999999999753  358999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||.+..
T Consensus       166 kLadFgvsa~  175 (516)
T KOG0582|consen  166 KLADFGVSAS  175 (516)
T ss_pred             EEcCceeeee
Confidence            9999998643

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.88  E-value=2.2e-22  Score=201.90  Aligned_cols=89  Identities=29%  Similarity=0.431  Sum_probs=80.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      .++..+..|++...+|||||||+||+|.+++..    ...+++..+..++.|++.||.|+|+++|+||||||+|||++.+
T Consensus       126 niv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~  205 (478)
T PTZ00267        126 GIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPT  205 (478)
T ss_pred             CEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCC
Confidence            356667778999999999999999999987753    3468999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCcccc
Q psy17600         80 GHIKLSDFGLCTG   92 (351)
Q Consensus        80 ~~~kl~DFGla~~   92 (351)
                      +.+||+|||+++.
T Consensus       206 ~~~kL~DFgla~~  218 (478)
T PTZ00267        206 GIIKLGDFGFSKQ  218 (478)
T ss_pred             CcEEEEeCcCcee
Confidence            9999999999753

>KOG0594|consensus

Probab=99.88  E-value=2e-22  Score=187.23  Aligned_cols=86  Identities=29%  Similarity=0.517  Sum_probs=74.7

Q ss_pred             eEeeeEEEecCC------cEEEEEecCCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          5 ACLKQLRMSDPI------NLYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         5 ~~~~~~~f~~~~------~lylVmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      ++.++-.+.+..      .+|+|+||+. -||..++....    .++...++.++.|++.||.|||+++|+||||||+||
T Consensus        73 iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNl  151 (323)
T KOG0594|consen   73 IVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNL  151 (323)
T ss_pred             eEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceE
Confidence            344455555555      8999999995 69999997654    577789999999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCccc
Q psy17600         75 LLDARGHIKLSDFGLCT   91 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~   91 (351)
                      |++++|.+||+|||+|+
T Consensus       152 Li~~~G~lKlaDFGlAr  168 (323)
T KOG0594|consen  152 LISSSGVLKLADFGLAR  168 (323)
T ss_pred             EECCCCcEeeeccchHH
Confidence            99999999999999985

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.88  E-value=3e-21  Score=179.81  Aligned_cols=182  Identities=28%  Similarity=0.547  Sum_probs=133.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|.+...+|+||||++||+|..++...+.+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|
T Consensus        59 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l  138 (279)
T cd05633          59 IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI  138 (279)
T ss_pred             EeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEE
Confidence            45566678888899999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-----cccccccC-------CCCCCccc------------CCCCCCCCCH---HHHHHHHHcCCCce
Q psy17600         85 SDFGLCTGLKKSH-----RTDFYRDL-------SQAKPSDF------------SYPPFCSENP---QETYRKVMSWRDTL  137 (351)
Q Consensus        85 ~DFGla~~~~~~~-----~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~---~~~~~~i~~~~~~~  137 (351)
                      +|||++.......     .+..|..+       .+....|.            +..||.....   .........  ...
T Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~  216 (279)
T cd05633         139 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--VNV  216 (279)
T ss_pred             ccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc--CCc
Confidence            9999986443211     11112111       11222232            2578864332   222222221  223


Q ss_pred             eCCCCCCCCHHHHHHHHH-HhcCccccCCC-CCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        138 VFPPEVPISEEARETIVR-FCSECDRRLGS-ARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~-l~~~~~~rlg~-~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                      ..|.  .++++++++|.+ |..+|.+|.+. ...+.++.   .||||++++|......
T Consensus       217 ~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~---~h~~~~~~~~~~~~~~  269 (279)
T cd05633         217 ELPD--SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVK---EHVFFKGIDWQQVYLQ  269 (279)
T ss_pred             CCcc--ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH---hCccccCCCHhHHhcC
Confidence            3333  378999999999 56899999974 34566666   8999999999987544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.87  E-value=3.7e-21  Score=178.94  Aligned_cols=186  Identities=29%  Similarity=0.533  Sum_probs=138.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+.....|.+...+|+||||+.||+|..++.+.+.+++..++.++.|++.|+.|||+++|+||||||+||+++.++.++
T Consensus        58 ~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~k  137 (278)
T cd05606          58 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR  137 (278)
T ss_pred             cEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEE
Confidence            34556667888999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-----ccccccC-------CCCCCccc------------CCCCCCCC---CHHHHHHHHHcCCCc
Q psy17600         84 LSDFGLCTGLKKSHR-----TDFYRDL-------SQAKPSDF------------SYPPFCSE---NPQETYRKVMSWRDT  136 (351)
Q Consensus        84 l~DFGla~~~~~~~~-----~~~~~~~-------~~~~~~~~------------~~~Pf~~~---~~~~~~~~i~~~~~~  136 (351)
                      |+|||++........     +..|..+       .+....|.            +..||...   +.......+..  ..
T Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~  215 (278)
T cd05606         138 ISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MA  215 (278)
T ss_pred             EccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc--cC
Confidence            999999875432211     1112111       12222333            25788765   33333333332  22


Q ss_pred             eeCCCCCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCC
Q psy17600        137 LVFPPEVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAA  196 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~  196 (351)
                      ..+|..  .|.++.++|.++ ..+|.+|.... ...+++.   .||||++++|+.+.....+
T Consensus       216 ~~~~~~--~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll---~~~~~~~~~~~~~~~~~~~  272 (278)
T cd05606         216 VELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK---EHPFFRSLDWQMVFLQKYP  272 (278)
T ss_pred             CCCCCc--CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHH---hCccccCCCchHhhhcccC
Confidence            344443  689999999994 57899999653 3566777   8899999999998765443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.87  E-value=6.5e-21  Score=179.53  Aligned_cols=201  Identities=36%  Similarity=0.585  Sum_probs=151.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|.+...+|+||||++||+|..++...+.+++..+..++.|++.|+.|+|+++++||||||+||+++.++.++|
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l  142 (305)
T cd05609          63 VVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKL  142 (305)
T ss_pred             eeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEE
Confidence            44556678888999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC----------------------cccccccCC------CCCCccc------------CCCCCCCCCHH
Q psy17600         85 SDFGLCTGLKKSH----------------------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQ  124 (351)
Q Consensus        85 ~DFGla~~~~~~~----------------------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~  124 (351)
                      +|||+++......                      .+..|..+.      +....|.            +..||.+.++.
T Consensus       143 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~  222 (305)
T cd05609         143 TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE  222 (305)
T ss_pred             eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999886311000                      011111111      1111222            26799998888


Q ss_pred             HHHHHHHcCCCceeCCCCC-CCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccC
Q psy17600        125 ETYRKVMSWRDTLVFPPEV-PISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVK  202 (351)
Q Consensus       125 ~~~~~i~~~~~~~~~p~~~-~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~  202 (351)
                      +.+..+...  ...+|... ..+.+.+++|.+ +..+|++|.+.. .+.++.   .||||...+|..+........+++.
T Consensus       223 ~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll---~~~~~~~~~~~~~~~~~~~~~~~~~  296 (305)
T cd05609         223 ELFGQVISD--DIEWPEGDEALPADAQDLISRLLRQNPLERLGTG-GAFEVK---QHRFFLGLDWNGLLRQKAEFIPQLE  296 (305)
T ss_pred             HHHHHHHhc--ccCCCCccccCCHHHHHHHHHHhccChhhccCcc-CHHHHH---hCccccCCCHHHHhhcCCCCCCCCC
Confidence            888877753  23333322 468899999999 457999999863 345555   8999999999998877666556667


Q ss_pred             CCCcCCCCC
Q psy17600        203 SIDDTSNFD  211 (351)
Q Consensus       203 ~~~d~~~f~  211 (351)
                      ..+|.+.||
T Consensus       297 ~~~~~~~~~  305 (305)
T cd05609         297 SEDDTSYFD  305 (305)
T ss_pred             CccccccCC
Confidence            777766653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0663|consensus

Probab=99.87  E-value=1.1e-22  Score=187.02  Aligned_cols=78  Identities=26%  Similarity=0.501  Sum_probs=72.3

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +-+.+|||||||+ .||.+++.... .|...++++++.|++.|++|||.+.|+||||||+|+|+.+.|.+||+|||+|+.
T Consensus       148 ~~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  148 NMDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLARE  226 (419)
T ss_pred             ccceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhh
Confidence            4567999999997 59999998765 899999999999999999999999999999999999999999999999999864

>KOG0198|consensus

Probab=99.87  E-value=1.9e-21  Score=182.70  Aligned_cols=159  Identities=29%  Similarity=0.480  Sum_probs=120.9

Q ss_pred             cEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CCcEEEEecCccccCc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIKLSDFGLCTGLK   94 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~~~kl~DFGla~~~~   94 (351)
                      .+++.|||++||+|.+++.+.+ .++|..++.|+.||+.||.|||++|||||||||+|||++. ++.+||+|||+++...
T Consensus        90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen   90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence            5999999999999999999876 7999999999999999999999999999999999999999 7999999999987554


Q ss_pred             C----------CCcccccccCCC------C-CCcccC------------CCCCCC-CCHHHHHHHHHcCCCceeCCCCCC
Q psy17600         95 K----------SHRTDFYRDLSQ------A-KPSDFS------------YPPFCS-ENPQETYRKVMSWRDTLVFPPEVP  144 (351)
Q Consensus        95 ~----------~~~~~~~~~~~~------~-~~~~~~------------~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~  144 (351)
                      .          ...+..|..+..      . +..|.|            .+||.. ....+..-.|........+|..  
T Consensus       170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~--  247 (313)
T KOG0198|consen  170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDS--  247 (313)
T ss_pred             cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcc--
Confidence            2          112233332211      1 144433            577765 3444444444443334566665  


Q ss_pred             CCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        145 ISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       145 ~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +|+++++||.+ +..+|..|-.    ++++-   .|||.+.
T Consensus       248 ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL---~hpf~~~  281 (313)
T KOG0198|consen  248 LSDEAKDFLRKCFKRDPEKRPT----AEELL---EHPFLKQ  281 (313)
T ss_pred             cCHHHHHHHHHHhhcCcccCcC----HHHHh---hChhhhc
Confidence            89999999999 7789999976    45665   7888754

>KOG4717|consensus

Probab=99.87  E-value=1.1e-21  Score=188.79  Aligned_cols=176  Identities=28%  Similarity=0.501  Sum_probs=143.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~   81 (351)
                      .++.+|....+..++|||+|+=.||||+++|.++ ..+.|+.++.|++||+.|+.|||+..||||||||+|+.+- .-|-
T Consensus        78 NiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGl  157 (864)
T KOG4717|consen   78 NIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGL  157 (864)
T ss_pred             CeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCc
Confidence            3577777888899999999999999999999875 4699999999999999999999999999999999999875 5699


Q ss_pred             EEEEecCccccCcCCCc-ccccccCCCCCCc------------cc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         82 IKLSDFGLCTGLKKSHR-TDFYRDLSQAKPS------------DF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~~~------------~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      +||+|||++..+..+.. +..++...|..|+            |.            +.+||...|..++...|+.++  
T Consensus       158 VKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK--  235 (864)
T KOG4717|consen  158 VKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK--  235 (864)
T ss_pred             eEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc--
Confidence            99999999976655443 3444444443332            22            269999999999999999864  


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      +..|..  +|.+++|||.. |.++|.+|..    .++|.   .|+|.+.+|-..-
T Consensus       236 YtvPsh--vS~eCrdLI~sMLvRdPkkRAs----lEeI~---s~~Wlq~~D~~~s  281 (864)
T KOG4717|consen  236 YTVPSH--VSKECRDLIQSMLVRDPKKRAS----LEEIV---STSWLQAGDRGLS  281 (864)
T ss_pred             ccCchh--hhHHHHHHHHHHHhcCchhhcc----HHHHh---ccccccCCCCCcc
Confidence            444543  89999999999 6689999875    56776   8899999987643

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4.6e-21  Score=181.20  Aligned_cols=189  Identities=36%  Similarity=0.652  Sum_probs=146.8

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ..+..+.+...+|+||||+.|++|.+++.+.  ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|
T Consensus        65 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l  144 (316)
T cd05574          65 TLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIML  144 (316)
T ss_pred             hheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEE
Confidence            3445677888999999999999999998754  46899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc------------------------------------ccccccC------CCCCCccc---------
Q psy17600         85 SDFGLCTGLKKSHR------------------------------------TDFYRDL------SQAKPSDF---------  113 (351)
Q Consensus        85 ~DFGla~~~~~~~~------------------------------------~~~~~~~------~~~~~~~~---------  113 (351)
                      +|||++........                                    +..|..+      ......|.         
T Consensus       145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~  224 (316)
T cd05574         145 SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE  224 (316)
T ss_pred             eecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence            99999864322110                                    0001111      11111222         


Q ss_pred             ---CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       114 ---~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                         +..||.+.+....+..+..  ....+|....++.+.+++|.+ +..+|.+|....++++++.   .||||++++|..
T Consensus       225 l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll---~~~~~~~~~~~~  299 (316)
T cd05574         225 MLYGTTPFKGSNRDETFSNILK--KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK---QHPFFRGVNWAL  299 (316)
T ss_pred             HhhCCCCCCCCchHHHHHHHhc--CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH---cCchhhcCChhh
Confidence               2689998888888877774  345566655578999999999 5589999999888888888   889999999999


Q ss_pred             hhcCCCCCCcc
Q psy17600        190 IRERPAAIPVQ  200 (351)
Q Consensus       190 l~~~~~~~~~~  200 (351)
                      +....+|.++.
T Consensus       300 ~~~~~~~~~~~  310 (316)
T cd05574         300 IRHTTPPIIPR  310 (316)
T ss_pred             cccCCCCCCCC
Confidence            98866555543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.86  E-value=5.5e-21  Score=178.52  Aligned_cols=188  Identities=23%  Similarity=0.429  Sum_probs=135.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +.+..+..+.+...+|+||||++||+|.+++...  ..+++..+..++.|++.||.|||+.+|+||||||+||+++.++.
T Consensus        61 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~  140 (285)
T cd05630          61 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH  140 (285)
T ss_pred             CeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC
Confidence            3455667788889999999999999999988643  35899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCHH---HHHHHHHcCC
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENPQ---ETYRKVMSWR  134 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~---~~~~~i~~~~  134 (351)
                      ++|+|||++........      +..|..      ..+....|.            +.+||......   .....+.. .
T Consensus       141 ~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~  219 (285)
T cd05630         141 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-E  219 (285)
T ss_pred             EEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-h
Confidence            99999999865432211      111111      112222333            26888765322   12222211 1


Q ss_pred             CceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCC
Q psy17600        135 DTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAI  197 (351)
Q Consensus       135 ~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~  197 (351)
                      ....++.  .++++++++|.+ |..+|++|++.. .+++++.   .||||+.++|..+.....++
T Consensus       220 ~~~~~~~--~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~---~h~~~~~~~~~~~~~~~~~~  279 (285)
T cd05630         220 VQEEYSE--KFSPDARSLCKMLLCKDPKERLGCQGGGAREVK---EHPLFKQINFKRLEAGMLEP  279 (285)
T ss_pred             hhhhcCc--cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHH---cChhhhccCHHHHhcCCCCC
Confidence            1122333  378899999999 557999999864 3466666   89999999999887654443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0658|consensus

Probab=99.86  E-value=1.4e-22  Score=188.53  Aligned_cols=77  Identities=30%  Similarity=0.557  Sum_probs=68.7

Q ss_pred             cEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-CcEEEEecCccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHIKLSDFGLCT   91 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~~kl~DFGla~   91 (351)
                      .+-+||||++ .+|+..++.    +..++.-.++.|+.||+.||.|||+.||+||||||+|+|+|.+ |.+||||||.|+
T Consensus        96 ~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK  174 (364)
T KOG0658|consen   96 YLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAK  174 (364)
T ss_pred             HHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence            4568999997 589888873    5678899999999999999999999999999999999999976 899999999987


Q ss_pred             cCc
Q psy17600         92 GLK   94 (351)
Q Consensus        92 ~~~   94 (351)
                      .+.
T Consensus       175 ~L~  177 (364)
T KOG0658|consen  175 VLV  177 (364)
T ss_pred             eec
Confidence            653

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.86  E-value=2.2e-21  Score=185.37  Aligned_cols=86  Identities=27%  Similarity=0.354  Sum_probs=72.9

Q ss_pred             EeeeEEEec-CCcEEEEEecCCCCCHHHHHHhC-----------------------------------------------
Q psy17600          6 CLKQLRMSD-PINLYLIMEFLPGGDMMTLLMKK-----------------------------------------------   37 (351)
Q Consensus         6 ~~~~~~f~~-~~~lylVmEy~~gg~L~~~l~~~-----------------------------------------------   37 (351)
                      +..+..+.+ ...+|+|||||+||+|.+++...                                               
T Consensus        74 v~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (338)
T cd05102          74 VNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPST  153 (338)
T ss_pred             eeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccccccc
Confidence            334444444 34689999999999999998743                                               


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         38 ---------------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        38 ---------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                                     ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       154 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~  222 (338)
T cd05102         154 SGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLAR  222 (338)
T ss_pred             CcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeeccccc
Confidence                           236677888899999999999999999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.86  E-value=7e-21  Score=176.62  Aligned_cols=188  Identities=23%  Similarity=0.459  Sum_probs=138.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+..+..|.+...+|+||||++|++|.+++.+..  .+++..+..++.|++.|+.|+|++|++||||+|+||+++.++.+
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~  134 (277)
T cd05577          55 IVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNV  134 (277)
T ss_pred             EeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCE
Confidence            4455667888899999999999999999997655  78999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCCH----HHHHHHHHcCC
Q psy17600         83 KLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSENP----QETYRKVMSWR  134 (351)
Q Consensus        83 kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~----~~~~~~i~~~~  134 (351)
                      +|+|||++........      +..|..+      .+....|.            +..||...+.    ..+...+..  
T Consensus       135 ~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--  212 (277)
T cd05577         135 RISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--  212 (277)
T ss_pred             EEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--
Confidence            9999999865432111      1111111      11112232            3678876544    222222221  


Q ss_pred             CceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        135 DTLVFPPEVPISEEARETIVRFC-SECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       135 ~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                      ....+|.  .++++.+++|.+++ .+|.+|.+... .++++.   .||||+.++|..+......+|+
T Consensus       213 ~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll---~h~~~~~~~~~~~~~~~~~~~~  274 (277)
T cd05577         213 MAVEYPD--KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR---EHPLFKDLNWRRLEAGMLEPPF  274 (277)
T ss_pred             ccccCCc--cCCHHHHHHHHHHccCChhHccCCCcccHHHHH---hChhhhcCChhhhhcCCCCCCC
Confidence            1223333  36899999999955 79999999876 777887   8999999999999765554443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0660|consensus

Probab=99.86  E-value=3.4e-22  Score=185.76  Aligned_cols=78  Identities=32%  Similarity=0.639  Sum_probs=72.7

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      -..+|+|+|+| +-||...++.+..+++..+++++.|++.||.|+|+.+|+||||||.|++++.+..+||+|||+|+..
T Consensus        98 f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~  175 (359)
T KOG0660|consen   98 FNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL  175 (359)
T ss_pred             cceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence            45789999999 6799999988777999999999999999999999999999999999999999999999999998643

>KOG0607|consensus

Probab=99.86  E-value=3.3e-21  Score=176.54  Aligned_cols=169  Identities=25%  Similarity=0.478  Sum_probs=131.5

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---CcEEEEec
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---GHIKLSDF   87 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~~~kl~DF   87 (351)
                      -|+|+.++|||||-+.||.|..+|.++..|+|.++..++..|..||.|||.+||.||||||+|||-..-   .-+||+||
T Consensus       144 fFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDf  223 (463)
T KOG0607|consen  144 FFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDF  223 (463)
T ss_pred             HhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecc
Confidence            489999999999999999999999999999999999999999999999999999999999999998544   35799999


Q ss_pred             CccccCcCCCc-----ccc----ccc----------------CCCCCCccc------------CCCCCCCC---C-----
Q psy17600         88 GLCTGLKKSHR-----TDF----YRD----------------LSQAKPSDF------------SYPPFCSE---N-----  122 (351)
Q Consensus        88 Gla~~~~~~~~-----~~~----~~~----------------~~~~~~~~~------------~~~Pf~~~---~-----  122 (351)
                      .|+.+++....     +..    .+.                .-|.+..|.            +|+||.|.   +     
T Consensus       224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr  303 (463)
T KOG0607|consen  224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR  303 (463)
T ss_pred             ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence            99876543221     100    011                112233332            38999652   1     


Q ss_pred             -------HHHHHHHHHcCCCceeCCCCC--CCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        123 -------PQETYRKVMSWRDTLVFPPEV--PISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       123 -------~~~~~~~i~~~~~~~~~p~~~--~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                             ...+|++|..  +.+.||...  .||.+++|+|+.|+ +++..||..    ..+.   .|||+..+--+
T Consensus       304 Ge~Cr~CQ~~LFesIQE--GkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa----~~vl---nhPw~~~~~~e  370 (463)
T KOG0607|consen  304 GEVCRVCQNKLFESIQE--GKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA----AQVL---NHPWVQRCAPE  370 (463)
T ss_pred             CCccHHHHHHHHHHHhc--cCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh----hhcc---CCccccccchh
Confidence                   3567899987  568899774  48999999999965 688888874    2343   89999987555

>KOG0201|consensus

Probab=99.86  E-value=3.7e-23  Score=196.00  Aligned_cols=86  Identities=33%  Similarity=0.482  Sum_probs=79.1

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      -.|.+|-....+|++||||.||++.+.+.....+.|.....++.+++.|+.|+|.++.||||||+.|||+..+|.+||+|
T Consensus        75 ~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~D  154 (467)
T KOG0201|consen   75 EYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLAD  154 (467)
T ss_pred             hhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEe
Confidence            45667888889999999999999999998877779999999999999999999999999999999999999999999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||.+..
T Consensus       155 fgVa~q  160 (467)
T KOG0201|consen  155 FGVAGQ  160 (467)
T ss_pred             cceeee
Confidence            999743

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=1.4e-20  Score=172.57  Aligned_cols=178  Identities=39%  Similarity=0.705  Sum_probs=136.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||++||+|.+++...+.+++..+..++.|++.||.|+|+.+++|+||+|.||+++.++.++|
T Consensus        59 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l  138 (260)
T cd05611          59 VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKL  138 (260)
T ss_pred             eeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEE
Confidence            45556678888899999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC---ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCC
Q psy17600         85 SDFGLCTGLKKSH---RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEV  143 (351)
Q Consensus        85 ~DFGla~~~~~~~---~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~  143 (351)
                      +|||++.......   .+..|..      ..+....|+            +.+||...+....+..+....  ..++...
T Consensus       139 ~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~  216 (260)
T cd05611         139 TDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR--INWPEEV  216 (260)
T ss_pred             eecccceeccccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc--cCCCCcc
Confidence            9999986533211   1111111      111222333            368999888888887776532  3333332


Q ss_pred             --CCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        144 --PISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       144 --~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                        .++.++.++|.+++ .+|+.|.+. .+.+++.   .||||++++|+
T Consensus       217 ~~~~~~~~~~~i~~~l~~~p~~R~~~-~~~~~~l---~~~~~~~~~~~  260 (260)
T cd05611         217 KEFCSPEAVDLINRLLCMDPAKRLGA-NGYQEIK---SHPFFKSINWD  260 (260)
T ss_pred             cccCCHHHHHHHHHHccCCHHHccCC-CcHHHHH---cChHhhcCCCC
Confidence              36899999999955 799999874 2455555   89999999996

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=1.9e-21  Score=180.96  Aligned_cols=87  Identities=30%  Similarity=0.431  Sum_probs=76.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +..+..|++...+|+||||++++.+..+......+++..++.++.|++.||.|||+.+|+||||||+||+++.++.+||+
T Consensus        63 v~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~  142 (287)
T cd07848          63 VELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLC  142 (287)
T ss_pred             cchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEe
Confidence            33445678888999999999998777665555679999999999999999999999999999999999999999999999


Q ss_pred             ecCcccc
Q psy17600         86 DFGLCTG   92 (351)
Q Consensus        86 DFGla~~   92 (351)
                      |||++..
T Consensus       143 Dfg~~~~  149 (287)
T cd07848         143 DFGFARN  149 (287)
T ss_pred             eccCccc
Confidence            9999753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=3.4e-21  Score=188.50  Aligned_cols=86  Identities=23%  Similarity=0.266  Sum_probs=78.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|+.....|+|||++. ++|..++.....+++..++.++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus       145 Iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL  223 (391)
T PHA03212        145 IIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCL  223 (391)
T ss_pred             CCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEE
Confidence            3445567888899999999995 799999988788999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||+++
T Consensus       224 ~DFG~a~  230 (391)
T PHA03212        224 GDFGAAC  230 (391)
T ss_pred             EeCCccc
Confidence            9999974

>KOG0667|consensus

Probab=99.85  E-value=2.4e-21  Score=191.72  Aligned_cols=88  Identities=27%  Similarity=0.372  Sum_probs=77.6

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-   79 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-   79 (351)
                      -..++++-.|.-.+++|||+|.+ +.+|+++|+.+.  .++-..++.++.||+.||.+||..||||.||||||||+..- 
T Consensus       248 ~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~  326 (586)
T KOG0667|consen  248 YNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK  326 (586)
T ss_pred             eeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC
Confidence            35677777899999999999988 579999998653  57899999999999999999999999999999999999644 


Q ss_pred             -CcEEEEecCccc
Q psy17600         80 -GHIKLSDFGLCT   91 (351)
Q Consensus        80 -~~~kl~DFGla~   91 (351)
                       ..+||+|||.+.
T Consensus       327 r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  327 RSRIKVIDFGSSC  339 (586)
T ss_pred             cCceeEEeccccc
Confidence             379999999874

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.85  E-value=3.6e-21  Score=183.75  Aligned_cols=87  Identities=25%  Similarity=0.394  Sum_probs=79.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||++||+|.+++.+...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+|
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~k  144 (331)
T cd06649          65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIK  144 (331)
T ss_pred             CCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEE
Confidence            4455667888899999999999999999998888899999999999999999999986 699999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       145 l~Dfg~~~  152 (331)
T cd06649         145 LCDFGVSG  152 (331)
T ss_pred             EccCcccc
Confidence            99999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.85  E-value=2.4e-21  Score=182.36  Aligned_cols=86  Identities=29%  Similarity=0.509  Sum_probs=76.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+++...+|+||||+. ++|.+++.+. +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k  143 (303)
T cd07869          65 IVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELK  143 (303)
T ss_pred             cCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence            4455667889999999999995 6788777654 5689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       144 l~Dfg~~~  151 (303)
T cd07869         144 LADFGLAR  151 (303)
T ss_pred             ECCCCcce
Confidence            99999974

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0659|consensus

Probab=99.85  E-value=2e-21  Score=174.02  Aligned_cols=89  Identities=30%  Similarity=0.455  Sum_probs=78.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.+.-.|....++-||+||++ -||...++.+ -.++..+++.|+.+++.|++|||++.|+||||||.|+|++.+|.+
T Consensus        62 nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~l  140 (318)
T KOG0659|consen   62 NIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQL  140 (318)
T ss_pred             chhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcE
Confidence            34444456888899999999997 6999998754 467999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+++..
T Consensus       141 KiADFGLAr~f  151 (318)
T KOG0659|consen  141 KIADFGLARFF  151 (318)
T ss_pred             Eeecccchhcc
Confidence            99999998643

>KOG0197|consensus

Probab=99.85  E-value=3.5e-21  Score=186.77  Aligned_cols=90  Identities=23%  Similarity=0.370  Sum_probs=79.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++.++..-.....+||||||++.|+|.++|+.  ...+.-.+...++.||+.|++||+++++|||||-..|||++++..
T Consensus       262 ~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~  341 (468)
T KOG0197|consen  262 KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLV  341 (468)
T ss_pred             CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCce
Confidence            345555555555579999999999999999986  456888899999999999999999999999999999999999999


Q ss_pred             EEEEecCccccC
Q psy17600         82 IKLSDFGLCTGL   93 (351)
Q Consensus        82 ~kl~DFGla~~~   93 (351)
                      +||+|||||+.+
T Consensus       342 vKIsDFGLAr~~  353 (468)
T KOG0197|consen  342 VKISDFGLARLI  353 (468)
T ss_pred             EEEccccccccc
Confidence            999999999843

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.85  E-value=3.1e-20  Score=170.39  Aligned_cols=179  Identities=33%  Similarity=0.632  Sum_probs=140.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||++||+|.+++.+...+++..+..++.|++.||.|+|+++++|+||+|.||+++.++.++|
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l  134 (262)
T cd05572          55 IVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKL  134 (262)
T ss_pred             EeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEE
Confidence            34445567888999999999999999999988778999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCC--HHHHHHHHHcCCCcee
Q psy17600         85 SDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSEN--PQETYRKVMSWRDTLV  138 (351)
Q Consensus        85 ~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~--~~~~~~~i~~~~~~~~  138 (351)
                      +|||++........      +..|..+      ......|.            +..||...+  +...+..+........
T Consensus       135 ~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  214 (262)
T cd05572         135 VDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE  214 (262)
T ss_pred             eeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC
Confidence            99999876543211      1111111      11122232            258998776  7788888886556667


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCch
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~  188 (351)
                      +|..  .+++.+++|.+ +..+|++|.+.. ..++++.   .||||++.+|+
T Consensus       215 ~~~~--~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~---~~~~~~~~~~~  261 (262)
T cd05572         215 FPNY--IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIK---KHKWFNGFDWE  261 (262)
T ss_pred             CCcc--cCHHHHHHHHHHccCChhhCcCCcccCHHHHh---cChhhhCCCCC
Confidence            7765  48899999999 558999999853 3456666   89999999997

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG4645|consensus

Probab=99.85  E-value=3.9e-22  Score=208.64  Aligned_cols=80  Identities=35%  Similarity=0.618  Sum_probs=74.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ..+.+||.||||.||+|.+.+...+..+|...+.|..|++.|+.|||++||||||+||+||+++.+|.+|++|||.|..+
T Consensus      1305 HRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1305 HREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred             cHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEe
Confidence            34678999999999999999988777889999999999999999999999999999999999999999999999998654

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=5.3e-21  Score=187.04  Aligned_cols=86  Identities=23%  Similarity=0.278  Sum_probs=78.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|++...+|+|||++. ++|..++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|
T Consensus       148 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l  226 (392)
T PHA03207        148 IINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVL  226 (392)
T ss_pred             ccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEE
Confidence            4555667888899999999995 689999877788999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       227 ~DfG~a~  233 (392)
T PHA03207        227 GDFGAAC  233 (392)
T ss_pred             ccCcccc
Confidence            9999975

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.84  E-value=4e-21  Score=183.01  Aligned_cols=75  Identities=32%  Similarity=0.653  Sum_probs=70.5

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+|||||. ++|.+++.+...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        77 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859          77 KDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             ceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence            46899999995 7999999888889999999999999999999999999999999999999999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0579|consensus

Probab=99.84  E-value=1.1e-21  Score=192.57  Aligned_cols=83  Identities=29%  Similarity=0.494  Sum_probs=74.5

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      ++-+|.-.++|||..|||.||....++.. ...+.+.+++.++.|++.||.|||+++|||||||..|||+.-+|.++|+|
T Consensus        94 Ll~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLAD  173 (1187)
T KOG0579|consen   94 LLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLAD  173 (1187)
T ss_pred             HHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeec
Confidence            44455566789999999999999887765 35689999999999999999999999999999999999999999999999


Q ss_pred             cCcc
Q psy17600         87 FGLC   90 (351)
Q Consensus        87 FGla   90 (351)
                      ||.+
T Consensus       174 FGVS  177 (1187)
T KOG0579|consen  174 FGVS  177 (1187)
T ss_pred             cccc
Confidence            9985

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.84  E-value=6.5e-20  Score=171.19  Aligned_cols=190  Identities=25%  Similarity=0.434  Sum_probs=138.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +.+..+..|.+...+|+||||+.+|+|..++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.
T Consensus        61 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~  140 (285)
T cd05632          61 FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGH  140 (285)
T ss_pred             CceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCC
Confidence            3455666788889999999999999999888653  36899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcC--CC
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSW--RD  135 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~--~~  135 (351)
                      ++|+|||++........      +..|..      ..+....|.            +..||.+.........+...  ..
T Consensus       141 ~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~  220 (285)
T cd05632         141 IRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET  220 (285)
T ss_pred             EEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc
Confidence            99999999865432111      111111      112222332            26899877665443333221  11


Q ss_pred             ceeCCCCCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        136 TLVFPPEVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      ...++.  .+++++.+++.++ ..+|.+|.+.. .+++++.   .|+||+.++|..+..+...++
T Consensus       221 ~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~  280 (285)
T cd05632         221 EEVYSA--KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVK---RHPFFRNMNFKRLEAGMLDPP  280 (285)
T ss_pred             ccccCc--cCCHHHHHHHHHHccCCHhHcCCCcccChHHHH---cChhhhcCCHHHHhcCcCCCC
Confidence            223333  3678999999994 57999999874 3466777   899999999999876655443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PTZ00284 protein kinase; Provisional

Probab=99.84  E-value=6.1e-21  Score=190.82  Aligned_cols=74  Identities=24%  Similarity=0.420  Sum_probs=63.5

Q ss_pred             EeeeEEEecC-CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCC
Q psy17600          6 CLKQLRMSDP-INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         6 ~~~~~~f~~~-~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~   80 (351)
                      +.++..|++. .++|+|||++ |++|.+++.+.+.+++..+..++.||+.||.|||+ .|||||||||+|||++.++
T Consensus       194 ~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~  269 (467)
T PTZ00284        194 MKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD  269 (467)
T ss_pred             eeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCC
Confidence            3344456554 5789999988 78999999888889999999999999999999998 5999999999999998765

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.84  E-value=8e-21  Score=181.70  Aligned_cols=88  Identities=26%  Similarity=0.420  Sum_probs=80.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..|++...+|+||||++||+|.+++.+.+.+++..+..++.|++.|+.|||++ +|+||||||+||+++.++.+
T Consensus        64 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~  143 (333)
T cd06650          64 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI  143 (333)
T ss_pred             cccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCE
Confidence            34556667889999999999999999999998888899999999999999999999975 79999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||++.
T Consensus       144 kL~Dfg~~~  152 (333)
T cd06650         144 KLCDFGVSG  152 (333)
T ss_pred             EEeeCCcch
Confidence            999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.84  E-value=7.7e-21  Score=184.87  Aligned_cols=89  Identities=25%  Similarity=0.287  Sum_probs=78.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------------------------------------
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------------------------------------   37 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------------------------------------   37 (351)
                      +.+..+..+++...+|+|||||++|+|.+++.+.                                              
T Consensus       103 nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (374)
T cd05106         103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYV  182 (374)
T ss_pred             ceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccc
Confidence            4566667788889999999999999999998642                                              


Q ss_pred             ------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         38 ------------------------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        38 ------------------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                                              ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~  261 (374)
T cd05106         183 EMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARD  261 (374)
T ss_pred             ccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeee
Confidence                                    1367788899999999999999999999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=6.5e-21  Score=192.01  Aligned_cols=76  Identities=30%  Similarity=0.547  Sum_probs=69.8

Q ss_pred             cEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+|+||||+++|+|.+++...    ..+++..+..++.|++.||.|+|+++|+||||||+|||++.++.+||+|||+++.
T Consensus       113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~  192 (496)
T PTZ00283        113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKM  192 (496)
T ss_pred             EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence            378999999999999988642    4689999999999999999999999999999999999999999999999999753

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.84  E-value=1.1e-20  Score=177.75  Aligned_cols=88  Identities=24%  Similarity=0.348  Sum_probs=76.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-------------------TLSEECTQFYIAETALAIDSIHKLGF   64 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-------------------~l~e~~~~~~~~qi~~al~~lH~~~i   64 (351)
                      ..+..+..+.+...+|+||||+++|+|.+++....                   .+++.....++.|++.||.|||++||
T Consensus        80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  159 (304)
T cd05096          80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF  159 (304)
T ss_pred             CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34555667788889999999999999999986532                   35667788899999999999999999


Q ss_pred             eeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         65 IHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        65 ihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +||||||+||+++.++.+||+|||+++
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~  186 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSR  186 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccce
Confidence            999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PHA02988 hypothetical protein; Provisional

Probab=99.84  E-value=1.1e-20  Score=176.50  Aligned_cols=87  Identities=17%  Similarity=0.126  Sum_probs=76.8

Q ss_pred             eEeeeEEEec----CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecCC
Q psy17600          5 ACLKQLRMSD----PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         5 ~~~~~~~f~~----~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~~   79 (351)
                      .+..+..+.+    ...+|+|||||+||+|.+++.+...+++.....++.+++.|+.|+|+. +++||||||+||+++.+
T Consensus        80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~  159 (283)
T PHA02988         80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN  159 (283)
T ss_pred             EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCC
Confidence            3444445544    457999999999999999998888899999999999999999999984 99999999999999999


Q ss_pred             CcEEEEecCccc
Q psy17600         80 GHIKLSDFGLCT   91 (351)
Q Consensus        80 ~~~kl~DFGla~   91 (351)
                      +.+||+|||+++
T Consensus       160 ~~~kl~dfg~~~  171 (283)
T PHA02988        160 YKLKIICHGLEK  171 (283)
T ss_pred             CcEEEcccchHh
Confidence            999999999864

>KOG0586|consensus

Probab=99.84  E-value=6.4e-21  Score=187.36  Aligned_cols=169  Identities=23%  Similarity=0.369  Sum_probs=136.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+|.++-...++..+|+||||+.||++++++.+++...+..++.++.|++.|++|||+++|||||||.+|||++.+..+|
T Consensus       116 nIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnik  195 (596)
T KOG0586|consen  116 NIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIK  195 (596)
T ss_pred             ceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccccee
Confidence            35677778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-ccccccCCCCCCc------------ccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-TDFYRDLSQAKPS------------DFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-~~~~~~~~~~~~~------------~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++..+..... ..+++.+.++.++            |.|            ..||.+.+..++...++.++-.+ 
T Consensus       196 IaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rI-  274 (596)
T KOG0586|consen  196 IADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRI-  274 (596)
T ss_pred             eeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecc-
Confidence            999999987654432 2334444444332            222            58999999999988888654333 


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                       |.  .+|-+++++|+++ ..+|.+|..    .++|+   .|.|-.
T Consensus       275 -p~--~ms~dce~lLrk~lvl~Pskr~~----~dqim---~~~W~n  310 (596)
T KOG0586|consen  275 -PF--YMSCDCEDLLRKFLVLNPSKRGP----CDQIM---KDRWRN  310 (596)
T ss_pred             -cc--eeechhHHHHHHhhccCccccCC----HHHhh---hhcccc
Confidence             33  3889999999995 579988876    34555   667764

>KOG0603|consensus

Probab=99.83  E-value=2.2e-20  Score=184.49  Aligned_cols=165  Identities=27%  Similarity=0.462  Sum_probs=129.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe-cCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL-DARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill-~~~~~~   82 (351)
                      .++-++-.+.+..++|+|||++.||.|...+.....+. .++..++++|+.|+.|||.+|||||||||+|||+ +..|++
T Consensus       377 niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~l  455 (612)
T KOG0603|consen  377 NIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHL  455 (612)
T ss_pred             cceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcE
Confidence            34556667889999999999999999999988766555 7788899999999999999999999999999999 689999


Q ss_pred             EEEecCccccCcCCCc----ccccc------cCCCCCCcccC------------CCCCCCCCHH-HHHHHHHcCCCceeC
Q psy17600         83 KLSDFGLCTGLKKSHR----TDFYR------DLSQAKPSDFS------------YPPFCSENPQ-ETYRKVMSWRDTLVF  139 (351)
Q Consensus        83 kl~DFGla~~~~~~~~----~~~~~------~~~~~~~~~~~------------~~Pf~~~~~~-~~~~~i~~~~~~~~~  139 (351)
                      +|+|||+++.+.....    +..|.      ..++...+|||            ++||...... +++..|....    |
T Consensus       456 rltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~----~  531 (612)
T KOG0603|consen  456 RLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK----F  531 (612)
T ss_pred             EEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc----c
Confidence            9999999987765522    22222      23455667775            6888765444 6777666532    1


Q ss_pred             CCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        140 PPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      .  ..+|.+|+|||.+|+ .+|.+|++.    +++.   .||||
T Consensus       532 s--~~vS~~AKdLl~~LL~~dP~~Rl~~----~~i~---~h~w~  566 (612)
T KOG0603|consen  532 S--ECVSDEAKDLLQQLLQVDPALRLGA----DEIG---AHPWF  566 (612)
T ss_pred             c--cccCHHHHHHHHHhccCChhhCcCh----hhhc---cCcch
Confidence            1  469999999999955 799999984    3554   88998

>KOG4236|consensus

Probab=99.83  E-value=5.5e-21  Score=184.49  Aligned_cols=88  Identities=30%  Similarity=0.584  Sum_probs=76.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC--
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLM--KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG--   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~--   80 (351)
                      ++.+-+-|++++++|+|||-+. ||+...|.  +.+.++|...++++.||+.||.|||.++|+|.||||||+|+....  
T Consensus       625 iV~le~M~ET~ervFVVMEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~F  703 (888)
T KOG4236|consen  625 IVNLECMFETPERVFVVMEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPF  703 (888)
T ss_pred             eeEEEEeecCCceEEEEehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCC
Confidence            3556677999999999999995 56666554  457899999999999999999999999999999999999997553  


Q ss_pred             -cEEEEecCccccC
Q psy17600         81 -HIKLSDFGLCTGL   93 (351)
Q Consensus        81 -~~kl~DFGla~~~   93 (351)
                       .+||||||+|+.+
T Consensus       704 PQvKlCDFGfARiI  717 (888)
T KOG4236|consen  704 PQVKLCDFGFARII  717 (888)
T ss_pred             Cceeeccccceeec
Confidence             6899999998654

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.83  E-value=4.2e-20  Score=172.34  Aligned_cols=187  Identities=30%  Similarity=0.583  Sum_probs=136.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|+....+|+||||+++++|.+++.....+++..+..++.|++.||.|||++|++||||+|+||+++.++.+||
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl  146 (290)
T cd05613          67 LVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL  146 (290)
T ss_pred             hhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEE
Confidence            44456678888899999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc--------ccccccCC--------CCCCccc------------CCCCCCCCCH----HHHHHHHHc
Q psy17600         85 SDFGLCTGLKKSHR--------TDFYRDLS--------QAKPSDF------------SYPPFCSENP----QETYRKVMS  132 (351)
Q Consensus        85 ~DFGla~~~~~~~~--------~~~~~~~~--------~~~~~~~------------~~~Pf~~~~~----~~~~~~i~~  132 (351)
                      +|||++........        +..|..+.        .....|.            +..||...+.    .++...+..
T Consensus       147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~  226 (290)
T cd05613         147 TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK  226 (290)
T ss_pred             eeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc
Confidence            99999875432211        11121111        1112232            2467764332    333333433


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        133 WRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      .  ...+|.  .+++...+++.+ +..+|.+|.+.. ...+++.   .||||..++|+.+..+..+.|
T Consensus       227 ~--~~~~~~--~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~  287 (290)
T cd05613         227 S--EPPYPQ--EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK---KHPFFQKINWDDLAAKKVPAP  287 (290)
T ss_pred             c--CCCCCc--cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH---cCcccccCCHHHHhhccCCCC
Confidence            2  223343  367899999999 457999998763 4566776   899999999999865544433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.83  E-value=3.2e-20  Score=171.17  Aligned_cols=87  Identities=26%  Similarity=0.358  Sum_probs=76.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      .+..+..+.+...+|+||||+++|+|.+++....     ..++..+..++.|++.|++|||+++|+||||||+||+++.+
T Consensus        57 ii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~  136 (269)
T cd05042          57 VLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD  136 (269)
T ss_pred             cceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC
Confidence            3445556788889999999999999999997643     24577788899999999999999999999999999999999


Q ss_pred             CcEEEEecCccc
Q psy17600         80 GHIKLSDFGLCT   91 (351)
Q Consensus        80 ~~~kl~DFGla~   91 (351)
                      +.+||+|||++.
T Consensus       137 ~~~kl~dfg~~~  148 (269)
T cd05042         137 LSVKIGDYGLAL  148 (269)
T ss_pred             CcEEEecccccc
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.83  E-value=3.8e-20  Score=170.32  Aligned_cols=87  Identities=32%  Similarity=0.470  Sum_probs=80.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+++...+|+||||+++|+|.+++...+.+++..+..++.|++.|+.|||++|++|+||||+||+++.++.++|
T Consensus        68 ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l  147 (267)
T cd06645          68 IVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKL  147 (267)
T ss_pred             eeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEE
Confidence            34455568888999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       148 ~dfg~~~  154 (267)
T cd06645         148 ADFGVSA  154 (267)
T ss_pred             Ccceeee
Confidence            9999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.83  E-value=6.2e-20  Score=171.06  Aligned_cols=186  Identities=33%  Similarity=0.633  Sum_probs=135.9

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +.....|++...+|+||||++||+|..++.+...+++..++.++.|++.||.|||+.+++||||+|.||+++.++.++|+
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~  147 (288)
T cd05583          68 VTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLT  147 (288)
T ss_pred             hhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEE
Confidence            34455688888999999999999999999887789999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCcCCCc--------ccccccCC--------CCCCccc------------CCCCCCCCCH----HHHHHHHHcC
Q psy17600         86 DFGLCTGLKKSHR--------TDFYRDLS--------QAKPSDF------------SYPPFCSENP----QETYRKVMSW  133 (351)
Q Consensus        86 DFGla~~~~~~~~--------~~~~~~~~--------~~~~~~~------------~~~Pf~~~~~----~~~~~~i~~~  133 (351)
                      |||++........        +..|..+.        .....|.            +..||...+.    .+..+.+...
T Consensus       148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~  227 (288)
T cd05583         148 DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS  227 (288)
T ss_pred             ECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc
Confidence            9999875432211        11111111        1112222            2568864332    2333334332


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                        ....|.  .++.+.+++|.+ +..+|+.|.+.. ++.++.   .||||+.++|+.+.+++.++|+
T Consensus       228 --~~~~~~--~~~~~l~~li~~~l~~~p~~R~t~~-~~~~~l---~~~~~~~~~~~~~~~~~~~~~~  286 (288)
T cd05583         228 --KPPFPK--TMSAEARDFIQKLLEKDPKKRLGAN-GADEIK---NHPFFQGIDWDDLAAKRIPAPF  286 (288)
T ss_pred             --CCCCCc--ccCHHHHHHHHHHhcCCHhhccCcc-hHHHHh---cCcccccCCHHHHhhhccCCCC
Confidence              122232  367899999999 557999999743 455555   8999999999999888777664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.83  E-value=2.9e-20  Score=189.73  Aligned_cols=80  Identities=23%  Similarity=0.489  Sum_probs=66.7

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDT--------------------LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD   72 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~--------------------l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~   72 (351)
                      .+...+|+||||+.+++|.+++.....                    ..+..+..++.|++.||.|||+++|+||||||+
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~  284 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ  284 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence            355679999999999999998865321                    113345678899999999999999999999999


Q ss_pred             cEEecC-CCcEEEEecCcccc
Q psy17600         73 NLLLDA-RGHIKLSDFGLCTG   92 (351)
Q Consensus        73 Nill~~-~~~~kl~DFGla~~   92 (351)
                      |||++. ++.+||+|||+|+.
T Consensus       285 NILl~~~~~~~KL~DFGlA~~  305 (566)
T PLN03225        285 NIIFSEGSGSFKIIDLGAAAD  305 (566)
T ss_pred             HEEEeCCCCcEEEEeCCCccc
Confidence            999985 58999999999853

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.83  E-value=1.9e-19  Score=164.36  Aligned_cols=172  Identities=39%  Similarity=0.787  Sum_probs=133.3

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      ..+.+...+|+||||++|++|.+++.+.+.+++..+..++.|++.||.|||.++++|+||+|+||+++.++.++|+|||+
T Consensus        60 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~  139 (265)
T cd05579          60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGL  139 (265)
T ss_pred             HheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEeccc
Confidence            34667788999999999999999998877899999999999999999999999999999999999999999999999999


Q ss_pred             cccCcCCCc----------cc-----ccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         90 CTGLKKSHR----------TD-----FYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        90 a~~~~~~~~----------~~-----~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      +........          ..     .|..+      ......|.            +..||...++.+.+..+..  ..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~  217 (265)
T cd05579         140 SKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GK  217 (265)
T ss_pred             chhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CC
Confidence            864322210          00     11111      11112222            3689998888888888876  33


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      ..+|....++.++.++|.+ +..+|.+|.... ...++.   .||||+++||
T Consensus       218 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~-~~~~~l---~~~~~~~~~~  265 (265)
T cd05579         218 IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAK-SIEEIK---NHPFFKGIDW  265 (265)
T ss_pred             cCCCccccCCHHHHHHHHHHhcCCHhhcCCCc-cHHHHh---cCccccCCCC
Confidence            5556554568999999999 557999998742 345555   8999999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.83  E-value=4.1e-20  Score=172.29  Aligned_cols=77  Identities=32%  Similarity=0.532  Sum_probs=69.5

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +...+|+||||+. ++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus        80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            4567999999996 6899988753  358899999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.82  E-value=9.6e-20  Score=168.28  Aligned_cols=86  Identities=22%  Similarity=0.317  Sum_probs=75.0

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +..+..+.+...+|+||||+++|+|.+++.+.    ..+++..+..++.|++.||.|||+++++||||||+|||++.++.
T Consensus        58 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~  137 (268)
T cd05086          58 LQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT  137 (268)
T ss_pred             hheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc
Confidence            34455677888899999999999999999754    23566777888999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      ++|+|||++.
T Consensus       138 ~~l~Dfg~~~  147 (268)
T cd05086         138 VKVGDYGIGP  147 (268)
T ss_pred             EEeccccccc
Confidence            9999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0574|consensus

Probab=99.82  E-value=2.6e-21  Score=175.98  Aligned_cols=88  Identities=28%  Similarity=0.468  Sum_probs=78.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..|.+|-....||+|||||..|+..++++ ++..+.|.+...++...+.||+|||...-||||||..|||++.+|+.|
T Consensus        90 VVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AK  169 (502)
T KOG0574|consen   90 VVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAK  169 (502)
T ss_pred             hhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhh
Confidence            3444556667778999999999999999987 457899999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||.|..
T Consensus       170 LADFGVAGQ  178 (502)
T KOG0574|consen  170 LADFGVAGQ  178 (502)
T ss_pred             hhhccccch
Confidence            999999754

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=4e-20  Score=178.60  Aligned_cols=86  Identities=16%  Similarity=0.287  Sum_probs=75.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+.+....|+||||+. |+|..++.+ ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus       119 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k  197 (357)
T PHA03209        119 VIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVC  197 (357)
T ss_pred             CcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence            3444556778888999999995 688888764 45689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       198 l~DfG~a~  205 (357)
T PHA03209        198 IGDLGAAQ  205 (357)
T ss_pred             EecCcccc
Confidence            99999864

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.82  E-value=5.5e-20  Score=178.92  Aligned_cols=89  Identities=24%  Similarity=0.267  Sum_probs=77.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC---------------------------------------------
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD---------------------------------------------   38 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~---------------------------------------------   38 (351)
                      +++..+..+.+....|+|||||+||+|.+++....                                             
T Consensus       100 nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  179 (375)
T cd05104         100 NIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVV  179 (375)
T ss_pred             ceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccc
Confidence            34556667888899999999999999999986432                                             


Q ss_pred             ------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         39 ------------------------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        39 ------------------------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                                                    .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG  259 (375)
T cd05104         180 PTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFG  259 (375)
T ss_pred             ccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCc
Confidence                                          36777888899999999999999999999999999999999999999999


Q ss_pred             cccc
Q psy17600         89 LCTG   92 (351)
Q Consensus        89 la~~   92 (351)
                      +++.
T Consensus       260 ~a~~  263 (375)
T cd05104         260 LARD  263 (375)
T ss_pred             ccee
Confidence            9753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.82  E-value=6.8e-20  Score=170.06  Aligned_cols=86  Identities=22%  Similarity=0.353  Sum_probs=76.2

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHRDI   69 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDl   69 (351)
                      +..+..+.+....|++|||+++|+|.+++...                ..+++..+..++.|++.||.|||.+|++||||
T Consensus        71 ~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dl  150 (283)
T cd05048          71 VCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDL  150 (283)
T ss_pred             ceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            33444567788899999999999999999764                44778888999999999999999999999999


Q ss_pred             CCCcEEecCCCcEEEEecCccc
Q psy17600         70 KPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        70 kp~Nill~~~~~~kl~DFGla~   91 (351)
                      ||+||+++.++.++|+|||+++
T Consensus       151 kp~Nil~~~~~~~~L~dfg~~~  172 (283)
T cd05048         151 AARNCLVGEGLTVKISDFGLSR  172 (283)
T ss_pred             ccceEEEcCCCcEEECCCccee
Confidence            9999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0596|consensus

Probab=99.82  E-value=5.9e-20  Score=178.45  Aligned_cols=78  Identities=36%  Similarity=0.659  Sum_probs=67.9

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTL-SEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l-~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+..+||||| |..-||.++|.+.... +....++|..|++.|+.+.|..||||.||||.|+|+- +|.+||+|||+|+.
T Consensus       431 ~d~~lYmvmE-~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~a  508 (677)
T KOG0596|consen  431 TDGYLYMVME-CGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANA  508 (677)
T ss_pred             cCceEEEEee-cccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcc
Confidence            5788999999 4567999999876543 4458899999999999999999999999999999984 69999999999865


Q ss_pred             C
Q psy17600         93 L   93 (351)
Q Consensus        93 ~   93 (351)
                      +
T Consensus       509 I  509 (677)
T KOG0596|consen  509 I  509 (677)
T ss_pred             c
Confidence            4

>KOG4250|consensus

Probab=99.82  E-value=3e-20  Score=185.16  Aligned_cols=75  Identities=32%  Similarity=0.565  Sum_probs=66.4

Q ss_pred             EEEEecCCCCCHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe--cCCCc--EEEEecCccc
Q psy17600         19 YLIMEFLPGGDMMTLLMK---KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL--DARGH--IKLSDFGLCT   91 (351)
Q Consensus        19 ylVmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill--~~~~~--~kl~DFGla~   91 (351)
                      .+|||||+||||...|.+   ...++|.....++..++.|+.|||.+||+||||||.||++  +.+|.  -||+|||.|+
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            599999999999999974   3469999999999999999999999999999999999997  34453  4999999987


Q ss_pred             cC
Q psy17600         92 GL   93 (351)
Q Consensus        92 ~~   93 (351)
                      .+
T Consensus       173 el  174 (732)
T KOG4250|consen  173 EL  174 (732)
T ss_pred             cC
Confidence            65

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.82  E-value=9.4e-20  Score=170.12  Aligned_cols=86  Identities=20%  Similarity=0.307  Sum_probs=77.4

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD   72 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~   72 (351)
                      +..+..+++...+|+||||+++|+|.+++...+             .+++..+..++.|++.||+|||++|++||||||+
T Consensus        70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~  149 (288)
T cd05093          70 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATR  149 (288)
T ss_pred             ceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence            444556788889999999999999999997543             3899999999999999999999999999999999


Q ss_pred             cEEecCCCcEEEEecCccc
Q psy17600         73 NLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        73 Nill~~~~~~kl~DFGla~   91 (351)
                      ||+++.++.++|+|||++.
T Consensus       150 Nili~~~~~~kl~dfg~~~  168 (288)
T cd05093         150 NCLVGENLLVKIGDFGMSR  168 (288)
T ss_pred             eEEEccCCcEEeccCCccc
Confidence            9999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG1187|consensus

Probab=99.82  E-value=5.3e-20  Score=177.82  Aligned_cols=84  Identities=32%  Similarity=0.381  Sum_probs=73.6

Q ss_pred             eeEEEecCC-cEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCCCCcEEecCCCc
Q psy17600          8 KQLRMSDPI-NLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLG---FIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         8 ~~~~f~~~~-~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~---iihrDlkp~Nill~~~~~   81 (351)
                      +.....+.. ..+||+||+++|+|.++|....  .+++.....++.+++.||+|||...   ||||||||.|||+|.+..
T Consensus       136 LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~  215 (361)
T KOG1187|consen  136 LLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN  215 (361)
T ss_pred             EEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence            333344445 5999999999999999998654  7899999999999999999999854   999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      .||+|||+|+
T Consensus       216 aKlsDFGLa~  225 (361)
T KOG1187|consen  216 AKLSDFGLAK  225 (361)
T ss_pred             EEccCccCcc
Confidence            9999999984

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.82  E-value=4.6e-20  Score=177.65  Aligned_cols=83  Identities=24%  Similarity=0.433  Sum_probs=72.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..|++...+|+|||||.+|+|...    ....+..+..++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus       134 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL  209 (353)
T PLN00034        134 VVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKI  209 (353)
T ss_pred             cceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEE
Confidence            34455568888999999999999998653    34567788889999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||+++
T Consensus       210 ~DfG~~~  216 (353)
T PLN00034        210 ADFGVSR  216 (353)
T ss_pred             cccccce
Confidence            9999975

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.82  E-value=1e-19  Score=169.32  Aligned_cols=76  Identities=32%  Similarity=0.534  Sum_probs=68.4

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ...+|+||||+. ++|.+++...  ..+++..++.++.|++.||.|+|++||+||||||+||+++.++.+||+|||++.
T Consensus        79 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863          79 ETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             CceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence            346899999998 4898888653  348999999999999999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.81  E-value=2.1e-19  Score=165.89  Aligned_cols=87  Identities=31%  Similarity=0.372  Sum_probs=75.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      .+..+..+.+...+|+||||+++|+|.+++....     .+++..++.++.|++.|+.|||+++++||||||+||+++.+
T Consensus        57 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~  136 (269)
T cd05087          57 LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD  136 (269)
T ss_pred             EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC
Confidence            4455567788888999999999999999986432     35667778889999999999999999999999999999999


Q ss_pred             CcEEEEecCccc
Q psy17600         80 GHIKLSDFGLCT   91 (351)
Q Consensus        80 ~~~kl~DFGla~   91 (351)
                      +.++|+|||+++
T Consensus       137 ~~~kL~dfg~~~  148 (269)
T cd05087         137 LTVKIGDYGLSH  148 (269)
T ss_pred             CcEEECCccccc
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.81  E-value=1e-19  Score=191.29  Aligned_cols=89  Identities=26%  Similarity=0.357  Sum_probs=75.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-----------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN   73 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-----------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~N   73 (351)
                      .+..+..+.+...+|+||||++||+|.+++...           ..++...+..++.|++.||+|||++||+||||||+|
T Consensus        64 IVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeN  143 (932)
T PRK13184         64 IVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDN  143 (932)
T ss_pred             cCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchhe
Confidence            344556678888999999999999999988642           123445667788999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCccccC
Q psy17600         74 LLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~~~   93 (351)
                      |+++.++.++|+|||+++..
T Consensus       144 ILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        144 ILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             EEEcCCCCEEEEecCcceec
Confidence            99999999999999998644

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.81  E-value=4.7e-19  Score=165.61  Aligned_cols=170  Identities=22%  Similarity=0.380  Sum_probs=123.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+++...+|+||||+.| +|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k  143 (288)
T cd07871          65 IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELK  143 (288)
T ss_pred             EeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence            45555678888899999999975 9999887644 578999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCC--
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRD--  135 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~--  135 (351)
                      |+|||+++......       .+..|..+.       +....|.            +.+||.+.+..+....+.....  
T Consensus       144 l~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  223 (288)
T cd07871         144 LADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTP  223 (288)
T ss_pred             ECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            99999987543211       111222211       2222332            3689998887766655432111  


Q ss_pred             ---------------ceeCCCC---------CCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        136 ---------------TLVFPPE---------VPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       136 ---------------~~~~p~~---------~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                                     ...+|..         ..++++++|+|.+++ .+|.+|.+    ++++.   .||||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l---~hp~f  288 (288)
T cd07871         224 TEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAAL---RHSYF  288 (288)
T ss_pred             ChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHh---cCCCC
Confidence                           0112211         236889999999955 69999997    56776   88998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.81  E-value=4.4e-19  Score=164.14  Aligned_cols=173  Identities=25%  Similarity=0.348  Sum_probs=125.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~   82 (351)
                      ..+..+..|.+...+|+||||++||+|.+++.+...+++..+..++.|++.|+.|+|+.|++||||||+||+++.++ .+
T Consensus        70 ~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~  149 (267)
T PHA03390         70 NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRI  149 (267)
T ss_pred             CEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeE
Confidence            35566778888899999999999999999998877899999999999999999999999999999999999999988 99


Q ss_pred             EEEecCccccCcCCC---cccccccC------CCCCCccc------------CCCCCCCCCHHHHH-HHHHcC-CCceeC
Q psy17600         83 KLSDFGLCTGLKKSH---RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETY-RKVMSW-RDTLVF  139 (351)
Q Consensus        83 kl~DFGla~~~~~~~---~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~-~~i~~~-~~~~~~  139 (351)
                      +|+|||++.......   .+..|..+      .+....|+            +..||......... ..+... ......
T Consensus       150 ~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  229 (267)
T PHA03390        150 YLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF  229 (267)
T ss_pred             EEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCc
Confidence            999999987554321   11111111      12222332            26788765433321 111110 122222


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +.  ..|+.++++|.++ ..+|.+|...   .+++.   .||||+.
T Consensus       230 ~~--~~~~~~~~li~~~l~~~p~~R~~~---~~~~l---~h~~~~~  267 (267)
T PHA03390        230 IK--NVSKNANDFVQSMLKYNINYRLTN---YNEII---KHPFLKI  267 (267)
T ss_pred             cc--ccCHHHHHHHHHHhccChhhCCch---HHHHh---cCCcccC
Confidence            32  3789999999994 5799999863   35666   8899974

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.81  E-value=1e-19  Score=171.47  Aligned_cols=87  Identities=30%  Similarity=0.453  Sum_probs=77.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+++...+|+||||+++|+|.+++.+.+                .+++..+..++.|++.|++|||++|++|||
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~d  149 (303)
T cd05088          70 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  149 (303)
T ss_pred             cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            3445556788889999999999999999997543                478889999999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |||+|||++.++.+||+|||++.
T Consensus       150 lkp~Nili~~~~~~kl~dfg~~~  172 (303)
T cd05088         150 LAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             cchheEEecCCCcEEeCccccCc
Confidence            99999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.81  E-value=1.3e-19  Score=169.35  Aligned_cols=85  Identities=22%  Similarity=0.313  Sum_probs=76.0

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIK   70 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlk   70 (351)
                      ..+..+++...+|+||||+++++|.+++....                .+++..+..++.|++.|+.|||++||+|||||
T Consensus        71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk  150 (291)
T cd05094          71 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA  150 (291)
T ss_pred             eEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence            34445777888999999999999999997542                37888999999999999999999999999999


Q ss_pred             CCcEEecCCCcEEEEecCccc
Q psy17600         71 PDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~   91 (351)
                      |+||+++.++.++|+|||++.
T Consensus       151 p~Nil~~~~~~~~l~dfg~a~  171 (291)
T cd05094         151 TRNCLVGANLLVKIGDFGMSR  171 (291)
T ss_pred             cceEEEccCCcEEECCCCccc
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=7.8e-20  Score=182.28  Aligned_cols=86  Identities=28%  Similarity=0.267  Sum_probs=75.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+......|+|||++. |+|..++... ..+++..+..++.|++.||.|||++|||||||||+|||++.++.+|
T Consensus       222 Iv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vk  300 (461)
T PHA03211        222 VLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDIC  300 (461)
T ss_pred             CCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEE
Confidence            3445555677888999999995 7888888654 4689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       301 L~DFGla~  308 (461)
T PHA03211        301 LGDFGAAC  308 (461)
T ss_pred             EcccCCce
Confidence            99999975

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.81  E-value=1.5e-19  Score=166.38  Aligned_cols=87  Identities=30%  Similarity=0.451  Sum_probs=80.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||+++|+|.+++.+.+.+++..+..++.|++.|+.|||++||+|||+||+||+++.++.++|
T Consensus        68 ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l  147 (267)
T cd06646          68 IVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKL  147 (267)
T ss_pred             eeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEE
Confidence            34455678888999999999999999999988788999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       148 ~dfg~~~  154 (267)
T cd06646         148 ADFGVAA  154 (267)
T ss_pred             CcCccce
Confidence            9999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.81  E-value=1.1e-19  Score=171.89  Aligned_cols=77  Identities=22%  Similarity=0.453  Sum_probs=66.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe----cCCC
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK---------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL----DARG   80 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~---------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill----~~~~   80 (351)
                      +...+|+||||+. ++|..++...         ..+++..++.++.|++.||.|||++||+||||||+|||+    +.++
T Consensus        71 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~  149 (317)
T cd07868          71 ADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG  149 (317)
T ss_pred             CCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence            4567899999985 5888877532         248899999999999999999999999999999999999    4567


Q ss_pred             cEEEEecCccc
Q psy17600         81 HIKLSDFGLCT   91 (351)
Q Consensus        81 ~~kl~DFGla~   91 (351)
                      .+||+|||+|+
T Consensus       150 ~~kl~DfG~a~  160 (317)
T cd07868         150 RVKIADMGFAR  160 (317)
T ss_pred             cEEEeecCcee
Confidence            89999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.81  E-value=1e-19  Score=167.94  Aligned_cols=86  Identities=14%  Similarity=0.268  Sum_probs=77.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+++...+|+||||+++|+|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.++
T Consensus        68 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~  147 (266)
T cd05064          68 IVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCK  147 (266)
T ss_pred             cCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEE
Confidence            344555678888999999999999999999764 5789999999999999999999999999999999999999999999


Q ss_pred             EEecCcc
Q psy17600         84 LSDFGLC   90 (351)
Q Consensus        84 l~DFGla   90 (351)
                      ++|||.+
T Consensus       148 l~dfg~~  154 (266)
T cd05064         148 ISGFRRL  154 (266)
T ss_pred             ECCCccc
Confidence            9999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.81  E-value=1.5e-19  Score=170.73  Aligned_cols=88  Identities=26%  Similarity=0.418  Sum_probs=80.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~   82 (351)
                      .++..+..|++...+|+||||++||+|.+++.+.+.+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+
T Consensus        60 ~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~  139 (308)
T cd06615          60 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEI  139 (308)
T ss_pred             CCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcE
Confidence            3445566788999999999999999999999888889999999999999999999997 599999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      +|+|||++.
T Consensus       140 ~l~dfg~~~  148 (308)
T cd06615         140 KLCDFGVSG  148 (308)
T ss_pred             EEccCCCcc
Confidence            999999863

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.81  E-value=8.6e-20  Score=176.40  Aligned_cols=74  Identities=27%  Similarity=0.599  Sum_probs=65.9

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ...+|+||||+.+ +|...+..  .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence            3468999999975 67776653  48888999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.81  E-value=7.1e-20  Score=177.61  Aligned_cols=82  Identities=27%  Similarity=0.594  Sum_probs=73.6

Q ss_pred             eEEEecCC-----cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          9 QLRMSDPI-----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         9 ~~~f~~~~-----~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+++..     .+|+||||+. ++|...+.....+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus        65 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~k  143 (372)
T cd07853          65 LDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK  143 (372)
T ss_pred             hheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEE
Confidence            33455554     7999999996 68988888778899999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       144 L~Dfg~a~  151 (372)
T cd07853         144 ICDFGLAR  151 (372)
T ss_pred             ecccccee
Confidence            99999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.81  E-value=1.6e-19  Score=177.16  Aligned_cols=52  Identities=25%  Similarity=0.398  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         40 LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        40 l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++
T Consensus       234 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~  285 (400)
T cd05105         234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR  285 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcce
Confidence            6677788899999999999999999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.81  E-value=1.9e-19  Score=166.64  Aligned_cols=87  Identities=18%  Similarity=0.245  Sum_probs=77.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIK   70 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlk   70 (351)
                      .+..+..+.+...+|+||||++||+|.+++...+              .+++..+..++.|++.|+.|+|++|++|||||
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk  149 (280)
T cd05049          70 IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA  149 (280)
T ss_pred             chheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence            4455566778889999999999999999997542              36788899999999999999999999999999


Q ss_pred             CCcEEecCCCcEEEEecCccc
Q psy17600         71 PDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~   91 (351)
                      |+||+++.++.++|+|||++.
T Consensus       150 p~nili~~~~~~kl~d~g~~~  170 (280)
T cd05049         150 TRNCLVGYDLVVKIGDFGMSR  170 (280)
T ss_pred             cceEEEcCCCeEEECCcccce
Confidence            999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.81  E-value=1.5e-19  Score=164.29  Aligned_cols=168  Identities=27%  Similarity=0.472  Sum_probs=118.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..+++...+|+||||++||+|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.++
T Consensus        46 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  125 (237)
T cd05576          46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQ  125 (237)
T ss_pred             ceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence            34555566788899999999999999999998877899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc----ccccccCC------CCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSHR----TDFYRDLS------QAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~~----~~~~~~~~------~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      ++|||++..+.....    +..|..+.      +....|.|            .+||....      ........+..|.
T Consensus       126 l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~  199 (237)
T cd05576         126 LTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHP------SGINTHTTLNIPE  199 (237)
T ss_pred             EecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCc------hhcccccccCCcc
Confidence            999998765433211    11122111      11112221            22222110      0000011122343


Q ss_pred             CCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCc
Q psy17600        142 EVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFF  182 (351)
Q Consensus       142 ~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff  182 (351)
                        .++++++++|.++ ..+|++|++.+ .+.+++.   .||||
T Consensus       200 --~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~---~h~~~  237 (237)
T cd05576         200 --WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIK---SHPFF  237 (237)
T ss_pred             --cCCHHHHHHHHHHccCCHHHhcCCCccchHHHH---cCCCC
Confidence              3789999999994 57999999863 3466666   88997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.81  E-value=2.1e-19  Score=173.33  Aligned_cols=73  Identities=29%  Similarity=0.621  Sum_probs=64.8

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+.+ +|...+.  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence            358999999975 5666654  358889999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.80  E-value=8.3e-20  Score=175.83  Aligned_cols=73  Identities=29%  Similarity=0.630  Sum_probs=65.3

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+.+ +|...+..  .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence            468999999975 66666643  58889999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.80  E-value=3.3e-19  Score=166.46  Aligned_cols=89  Identities=21%  Similarity=0.346  Sum_probs=78.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      +.+..+..+.+...+|++|||+++|+|..++...                ..+++..+..++.|++.||.|||+++|+||
T Consensus        77 ~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~  156 (293)
T cd05053          77 NIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHR  156 (293)
T ss_pred             CeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            3455556677888899999999999999998642                357888889999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+||+++.++.+||+|||+++.
T Consensus       157 dlkp~Nil~~~~~~~kL~Dfg~~~~  181 (293)
T cd05053         157 DLAARNVLVTEDHVMKIADFGLARD  181 (293)
T ss_pred             ccceeeEEEcCCCeEEeCccccccc
Confidence            9999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.80  E-value=2.8e-19  Score=165.72  Aligned_cols=88  Identities=22%  Similarity=0.263  Sum_probs=75.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      .+..+..+.+....|+||||+++|+|.+++.+..          .++...+..++.|++.|+.|||+.|++||||||+||
T Consensus        71 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Ni  150 (277)
T cd05062          71 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNC  150 (277)
T ss_pred             eeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheE
Confidence            3445556778889999999999999999987532          246677888899999999999999999999999999


Q ss_pred             EecCCCcEEEEecCcccc
Q psy17600         75 LLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~~   92 (351)
                      +++.++.++|+|||++..
T Consensus       151 l~~~~~~~~l~dfg~~~~  168 (277)
T cd05062         151 MVAEDFTVKIGDFGMTRD  168 (277)
T ss_pred             EEcCCCCEEECCCCCccc
Confidence            999999999999999753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.80  E-value=2.5e-19  Score=163.15  Aligned_cols=86  Identities=29%  Similarity=0.458  Sum_probs=78.3

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKK---------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD   77 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~   77 (351)
                      ..+..+.+...+|+||||+++|+|.+++...         ..+++..+..++.|++.|+.|||+++++||||||+||+++
T Consensus        60 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~  139 (262)
T cd00192          60 RLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG  139 (262)
T ss_pred             eeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC
Confidence            3444567788999999999999999999875         6789999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCcccc
Q psy17600         78 ARGHIKLSDFGLCTG   92 (351)
Q Consensus        78 ~~~~~kl~DFGla~~   92 (351)
                      .++.++|+|||.+..
T Consensus       140 ~~~~~~l~dfg~~~~  154 (262)
T cd00192         140 EDLVVKISDFGLSRD  154 (262)
T ss_pred             CCCcEEEcccccccc
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.80  E-value=2.8e-19  Score=166.29  Aligned_cols=84  Identities=19%  Similarity=0.407  Sum_probs=74.9

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      .++.+.....++++|||+++|+|.+++... +.+++..+..++.|++.|+.|||+++++||||||+||+++.++.+||+|
T Consensus        73 ~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~D  152 (279)
T cd05111          73 RLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIAD  152 (279)
T ss_pred             eEEEEECCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcC
Confidence            334455566789999999999999999753 5689999999999999999999999999999999999999999999999


Q ss_pred             cCccc
Q psy17600         87 FGLCT   91 (351)
Q Consensus        87 FGla~   91 (351)
                      ||+++
T Consensus       153 fg~~~  157 (279)
T cd05111         153 FGVAD  157 (279)
T ss_pred             Cccce
Confidence            99975

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.80  E-value=9e-19  Score=163.46  Aligned_cols=179  Identities=18%  Similarity=0.173  Sum_probs=128.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      .+..+..+.+....|+||||+++|+|.+++.+..          .+....+..++.|++.||.|||+++|+||||||+||
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~ni  150 (288)
T cd05061          71 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNC  150 (288)
T ss_pred             eeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheE
Confidence            4445556888889999999999999999997532          235567788999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCccccCcCCCc---------ccccccCC------CCCCccc-------------CCCCCCCCCHHHH
Q psy17600         75 LLDARGHIKLSDFGLCTGLKKSHR---------TDFYRDLS------QAKPSDF-------------SYPPFCSENPQET  126 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~~~~~~~~---------~~~~~~~~------~~~~~~~-------------~~~Pf~~~~~~~~  126 (351)
                      +++.++.++|+|||+++.......         +..|..+.      +....|.             +.+||.+.+..+.
T Consensus       151 li~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~  230 (288)
T cd05061         151 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV  230 (288)
T ss_pred             EEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            999999999999999874322110         01111111      1111121             2578888888887


Q ss_pred             HHHHHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        127 YRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       127 ~~~i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      +..+... .....|.  ..+++.+++|.+ +..+|++|.+...=.+.+++. .||||+++||
T Consensus       231 ~~~~~~~-~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~-~~~~~~~~~~  288 (288)
T cd05061         231 LKFVMDG-GYLDQPD--NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-LHPSFPEVSF  288 (288)
T ss_pred             HHHHHcC-CCCCCCC--CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh-cCCCCCCCCC
Confidence            7777643 2223333  357899999999 557999998754333344422 5999999999

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.80  E-value=3.1e-19  Score=162.79  Aligned_cols=86  Identities=24%  Similarity=0.427  Sum_probs=77.4

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+++...+|+||||+++++|.+++.+.+ .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||
T Consensus        56 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl  135 (252)
T cd05084          56 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKI  135 (252)
T ss_pred             ceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEE
Confidence            344556778889999999999999999997644 5899999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       136 ~dfg~~~  142 (252)
T cd05084         136 SDFGMSR  142 (252)
T ss_pred             CccccCc
Confidence            9999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=2.9e-19  Score=164.03  Aligned_cols=86  Identities=21%  Similarity=0.195  Sum_probs=73.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE-
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI-   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~-   82 (351)
                      .+..+..+.+....|+||||+.+|+|..++...+ .+++..+..++.|++.|+.|||++||+||||||+||+++.++.. 
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~  140 (258)
T cd05078          61 LVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK  140 (258)
T ss_pred             hhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc
Confidence            3445567788889999999999999999997644 57899999999999999999999999999999999999887754 


Q ss_pred             -------EEEecCcc
Q psy17600         83 -------KLSDFGLC   90 (351)
Q Consensus        83 -------kl~DFGla   90 (351)
                             +++|||++
T Consensus       141 ~~~~~~~~l~d~g~~  155 (258)
T cd05078         141 TGNPPFIKLSDPGIS  155 (258)
T ss_pred             cCCCceEEecccccc
Confidence                   56666653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.80  E-value=2.8e-19  Score=168.21  Aligned_cols=88  Identities=20%  Similarity=0.304  Sum_probs=76.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+++...+|+||||+++|+|.+++.+..                .++......++.|++.||.|||++|++|||
T Consensus        83 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~d  162 (304)
T cd05101          83 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRD  162 (304)
T ss_pred             chheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            3445556788889999999999999999997642                356777888999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCcccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |||+||+++.++.+||+|||+++.
T Consensus       163 lkp~Nili~~~~~~kl~D~g~~~~  186 (304)
T cd05101         163 LAARNVLVTENNVMKIADFGLARD  186 (304)
T ss_pred             cccceEEEcCCCcEEECCCcccee
Confidence            999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.80  E-value=3.9e-19  Score=166.04  Aligned_cols=87  Identities=26%  Similarity=0.398  Sum_probs=78.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-----------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN   73 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-----------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~N   73 (351)
                      .+..+..+.+...+|+||||+++++|..++.+..           .+++..+..++.|++.||.|||++|++||||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            3444556777789999999999999999997765           68999999999999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCccc
Q psy17600         74 LLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~   91 (351)
                      |+++.++.++|+|||++.
T Consensus       161 ili~~~~~~~l~dfg~~~  178 (296)
T cd05051         161 CLVGKNYTIKIADFGMSR  178 (296)
T ss_pred             eeecCCCceEEcccccee
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.80  E-value=3.5e-19  Score=163.23  Aligned_cols=82  Identities=24%  Similarity=0.452  Sum_probs=75.2

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      .+......++||||+++|+|.+++.+...+++..+..++.|++.|++|+|++||+||||||.||+++.++.+||+|||++
T Consensus        63 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~  142 (257)
T cd05116          63 GICEAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLS  142 (257)
T ss_pred             EEEcCCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccc
Confidence            34455678999999999999999988778999999999999999999999999999999999999999999999999997


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      ..
T Consensus       143 ~~  144 (257)
T cd05116         143 KA  144 (257)
T ss_pred             cc
Confidence            53

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=3e-19  Score=168.33  Aligned_cols=87  Identities=23%  Similarity=0.309  Sum_probs=77.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+.+...+|+||||+++|+|.+++....                .++......++.|++.||+|||++|++|||
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d  165 (307)
T cd05098          86 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRD  165 (307)
T ss_pred             EeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            4445556778889999999999999999997542                477888899999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |||+||+++.++.+||+|||++.
T Consensus       166 lkp~Nill~~~~~~kL~dfg~a~  188 (307)
T cd05098         166 LAARNVLVTEDNVMKIADFGLAR  188 (307)
T ss_pred             ccHHheEEcCCCcEEECCCcccc
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.80  E-value=3e-19  Score=167.57  Aligned_cols=87  Identities=25%  Similarity=0.411  Sum_probs=77.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+.+...+|+||||+++|+|.+++.+..                .+++..+..++.|++.|++|||++||+|||
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d  144 (297)
T cd05089          65 IINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRD  144 (297)
T ss_pred             hhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCc
Confidence            3445556778888999999999999999997532                478889999999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |||+||+++.++.+||+|||++.
T Consensus       145 lkp~Nill~~~~~~kl~dfg~~~  167 (297)
T cd05089         145 LAARNVLVGENLASKIADFGLSR  167 (297)
T ss_pred             CCcceEEECCCCeEEECCcCCCc
Confidence            99999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.80  E-value=4.3e-19  Score=167.95  Aligned_cols=88  Identities=24%  Similarity=0.349  Sum_probs=77.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+.+...+|+||||+++|+|.+++...                ..++...+..++.|++.||.|||++|++|||
T Consensus        80 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d  159 (314)
T cd05099          80 IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRD  159 (314)
T ss_pred             eeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            344555677788899999999999999999753                2477888889999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCcccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |||+||+++.++.+||+|||+++.
T Consensus       160 lkp~Nill~~~~~~kL~Dfg~~~~  183 (314)
T cd05099         160 LAARNVLVTEDNVMKIADFGLARG  183 (314)
T ss_pred             ccceeEEEcCCCcEEEcccccccc
Confidence            999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.80  E-value=3.7e-19  Score=165.39  Aligned_cols=88  Identities=20%  Similarity=0.375  Sum_probs=76.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-----------------DTLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      .+..+..+++....|+||||+++|+|.+++...                 ..+++..+..++.|++.||.|||++|++||
T Consensus        69 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~  148 (283)
T cd05090          69 IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHK  148 (283)
T ss_pred             eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehh
Confidence            344455678888999999999999999998532                 246788888999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+||+++.++.+||+|||+++.
T Consensus       149 dlkp~nili~~~~~~kl~dfg~~~~  173 (283)
T cd05090         149 DLAARNILIGEQLHVKISDLGLSRE  173 (283)
T ss_pred             ccccceEEEcCCCcEEecccccccc
Confidence            9999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.80  E-value=3.9e-19  Score=163.92  Aligned_cols=86  Identities=23%  Similarity=0.288  Sum_probs=74.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc--
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH--   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~--   81 (351)
                      .+..+..+.+....|+||||+++|+|..++.+. ..+++..+..++.|++.|+.|||+++|+||||||+|||++.++.  
T Consensus        66 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~  145 (262)
T cd05077          66 IVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG  145 (262)
T ss_pred             EeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC
Confidence            444555677888899999999999999888753 56899999999999999999999999999999999999987664  


Q ss_pred             -----EEEEecCcc
Q psy17600         82 -----IKLSDFGLC   90 (351)
Q Consensus        82 -----~kl~DFGla   90 (351)
                           ++++|||++
T Consensus       146 ~~~~~~~l~d~g~~  159 (262)
T cd05077         146 ECGPFIKLSDPGIP  159 (262)
T ss_pred             CCCceeEeCCCCCC
Confidence                 788888875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.80  E-value=3.4e-19  Score=165.34  Aligned_cols=78  Identities=21%  Similarity=0.465  Sum_probs=71.5

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ....+++|||+++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.
T Consensus        80 ~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109          80 TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceee
Confidence            45688999999999999999763 5689999999999999999999999999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.80  E-value=4.7e-19  Score=161.54  Aligned_cols=86  Identities=29%  Similarity=0.458  Sum_probs=77.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+....|+||||++|++|.+++...  ..+++..+..++.|++.|+.|||.+|++|+||||+||+++.++.++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~  141 (256)
T cd08529          62 IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVK  141 (256)
T ss_pred             ehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEE
Confidence            44455678888999999999999999999764  5688999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       142 l~df~~~~  149 (256)
T cd08529         142 IGDLGVAK  149 (256)
T ss_pred             Ecccccce
Confidence            99999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.80  E-value=4.8e-19  Score=162.11  Aligned_cols=87  Identities=24%  Similarity=0.442  Sum_probs=78.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||++||+|.+++... +.+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus        61 i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k  140 (256)
T cd05114          61 LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVK  140 (256)
T ss_pred             ceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEE
Confidence            444556678888999999999999999998753 4688999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       141 l~d~g~~~  148 (256)
T cd05114         141 VSDFGMTR  148 (256)
T ss_pred             ECCCCCcc
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.80  E-value=3.9e-19  Score=164.25  Aligned_cols=87  Identities=30%  Similarity=0.453  Sum_probs=77.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+.....+|+||||+++|+|.+++.+..                .+++.....++.|++.|++|||++|++|||
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~d  137 (270)
T cd05047          58 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  137 (270)
T ss_pred             eeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            3445556777888999999999999999997543                367888999999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |||+||+++.++.+||+|||++.
T Consensus       138 ikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         138 LAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             cccceEEEcCCCeEEECCCCCcc
Confidence            99999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.80  E-value=3.3e-19  Score=167.96  Aligned_cols=88  Identities=24%  Similarity=0.271  Sum_probs=79.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      ..+..+..+++...+|+||||+++|+|.+++....  .+++..+..++.|++.|+.|+|+++|+|+||||+||+++.++.
T Consensus       100 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  179 (302)
T cd05055         100 NIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI  179 (302)
T ss_pred             CcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCe
Confidence            44556667888889999999999999999997543  3899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      ++++|||+++
T Consensus       180 ~~l~dfg~~~  189 (302)
T cd05055         180 VKICDFGLAR  189 (302)
T ss_pred             EEECCCcccc
Confidence            9999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=2.4e-19  Score=180.87  Aligned_cols=88  Identities=26%  Similarity=0.373  Sum_probs=73.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      .++..+..+++....|+|||++. ++|..++...     .......++.++.|++.||.|||++|||||||||+|||++.
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~  302 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC  302 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            34556667888899999999985 6777776432     22345677889999999999999999999999999999999


Q ss_pred             CCcEEEEecCcccc
Q psy17600         79 RGHIKLSDFGLCTG   92 (351)
Q Consensus        79 ~~~~kl~DFGla~~   92 (351)
                      ++.+||+|||+++.
T Consensus       303 ~~~vkL~DFGla~~  316 (501)
T PHA03210        303 DGKIVLGDFGTAMP  316 (501)
T ss_pred             CCCEEEEeCCCcee
Confidence            99999999999753

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.79  E-value=7.2e-19  Score=161.57  Aligned_cols=79  Identities=28%  Similarity=0.486  Sum_probs=72.4

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .....+|+||||+++|+|.+++.. ...+++..+..++.|++.|+.|||++|++||||||+||+++.++.+||+|||++.
T Consensus        64 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~  143 (257)
T cd05115          64 CEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSK  143 (257)
T ss_pred             EcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccc
Confidence            345678999999999999999874 4578999999999999999999999999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.79  E-value=4.8e-19  Score=164.54  Aligned_cols=84  Identities=26%  Similarity=0.443  Sum_probs=74.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ..+..+..|.+....|+||||+++|+|..+    ..+++..+..++.|++.|+.|||+.||+|+||||+||+++.++.++
T Consensus        60 ~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~  135 (279)
T cd06619          60 YIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVK  135 (279)
T ss_pred             CeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEE
Confidence            345556678888999999999999999654    3578889999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       136 l~dfg~~~  143 (279)
T cd06619         136 LCDFGVST  143 (279)
T ss_pred             EeeCCcce
Confidence            99999964

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.79  E-value=6.9e-19  Score=174.82  Aligned_cols=164  Identities=28%  Similarity=0.429  Sum_probs=116.5

Q ss_pred             CcEEEEEecCCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cEEEEecCcc
Q psy17600         16 INLYLIMEFLPGGDMMTLLM----KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HIKLSDFGLC   90 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~kl~DFGla   90 (351)
                      ..+|+|||||++ +|..++.    ....+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+|
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            357899999985 6666554    346789999999999999999999999999999999999998665 6999999999


Q ss_pred             ccCcCCCc------ccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC----------
Q psy17600         91 TGLKKSHR------TDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRD----------  135 (351)
Q Consensus        91 ~~~~~~~~------~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~----------  135 (351)
                      +.+.....      +..|..+       .+....|.            +++||.+.+..+.+.++....+          
T Consensus       219 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  298 (440)
T PTZ00036        219 KNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM  298 (440)
T ss_pred             hhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence            86533221      1222221       12222332            3799999887766655543211          


Q ss_pred             -----ceeCCCC----------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        136 -----TLVFPPE----------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       136 -----~~~~p~~----------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                           .+.+|..          ...++++++||.++ ..+|.+|++    +.++.   .||||+++..
T Consensus       299 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t----a~e~l---~hp~f~~~~~  359 (440)
T PTZ00036        299 NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN----PIEAL---ADPFFDDLRD  359 (440)
T ss_pred             chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----HHHHh---CChhHHhhhc
Confidence                 1122211          12578999999995 579999997    45676   8999987644

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.79  E-value=4.5e-19  Score=170.02  Aligned_cols=80  Identities=28%  Similarity=0.398  Sum_probs=71.2

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC-------------------------------------------------------
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK-------------------------------------------------------   37 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~-------------------------------------------------------   37 (351)
                      .+...+|++|||+++|+|.+++...                                                       
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence            3456799999999999999988642                                                       


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         38 ------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        38 ------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                            ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~  222 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARD  222 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchh
Confidence                  2568888999999999999999999999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG1035|consensus

Probab=99.79  E-value=1.1e-19  Score=189.68  Aligned_cols=80  Identities=31%  Similarity=0.552  Sum_probs=70.1

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDTL-SEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~l-~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |.+.-+||-||||+.-.|.+++.++... ....+..++.||+.||.|+|.+|||||||||.||+++.++.|||+|||+|+
T Consensus       666 q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt  745 (1351)
T KOG1035|consen  666 QKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLAT  745 (1351)
T ss_pred             ccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccch
Confidence            3446789999999988888888766544 366778889999999999999999999999999999999999999999986


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       746 ~  746 (1351)
T KOG1035|consen  746 D  746 (1351)
T ss_pred             h
Confidence            4

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.79  E-value=4.7e-19  Score=164.72  Aligned_cols=86  Identities=21%  Similarity=0.311  Sum_probs=76.7

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD---------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIK   70 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~---------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlk   70 (351)
                      +..+..+.+....|+||||+++|+|.+++....               .+++..+..++.|++.|+.|||++|++|||||
T Consensus        70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlk  149 (280)
T cd05092          70 VRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLA  149 (280)
T ss_pred             ceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence            334456778888999999999999999997643               47888999999999999999999999999999


Q ss_pred             CCcEEecCCCcEEEEecCccc
Q psy17600         71 PDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~   91 (351)
                      |+||+++.++.++|+|||++.
T Consensus       150 p~nil~~~~~~~kL~dfg~~~  170 (280)
T cd05092         150 TRNCLVGQGLVVKIGDFGMSR  170 (280)
T ss_pred             HhhEEEcCCCCEEECCCCcee
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=4.9e-19  Score=163.61  Aligned_cols=87  Identities=21%  Similarity=0.277  Sum_probs=76.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      .+..+..+.+...+|+||||+++|+|.+++....          .+++..+..++.|++.||.|||+++++||||||+||
T Consensus        71 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~ni  150 (277)
T cd05032          71 VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNC  150 (277)
T ss_pred             eeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheE
Confidence            4445556788889999999999999999986432          357778888999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCccc
Q psy17600         75 LLDARGHIKLSDFGLCT   91 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~   91 (351)
                      +++.++.+||+|||+++
T Consensus       151 ll~~~~~~kl~dfg~~~  167 (277)
T cd05032         151 MVAEDLTVKIGDFGMTR  167 (277)
T ss_pred             EEcCCCCEEECCcccch
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.79  E-value=6.5e-19  Score=163.99  Aligned_cols=77  Identities=27%  Similarity=0.554  Sum_probs=70.9

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ..+|+||||++|++|.+++.+. ..+++..+..++.|++.||.|+|++|++||||||+||+++.++.++|+|||++..
T Consensus        81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence            6789999999999999998764 3578999999999999999999999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.79  E-value=5.4e-19  Score=161.88  Aligned_cols=87  Identities=23%  Similarity=0.408  Sum_probs=78.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||++|++|.+++... ..+++..+..++.|++.|+.|||++|++||||||+||+++.++.+|
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k  140 (256)
T cd05059          61 LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVK  140 (256)
T ss_pred             EEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEE
Confidence            444555678888999999999999999998753 4688999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       141 l~dfg~~~  148 (256)
T cd05059         141 VSDFGLAR  148 (256)
T ss_pred             ECCcccce
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.79  E-value=5.9e-19  Score=161.25  Aligned_cols=87  Identities=29%  Similarity=0.546  Sum_probs=78.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+..+..|++...+|+||||+++|+|..++...  ..+++..+..++.|++.|+.|||++||+|+||||+||+++.++.+
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~  139 (255)
T cd08219          60 IVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKV  139 (255)
T ss_pred             cceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcE
Confidence            344556788999999999999999999988643  457899999999999999999999999999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      +++|||++.
T Consensus       140 ~l~dfg~~~  148 (255)
T cd08219         140 KLGDFGSAR  148 (255)
T ss_pred             EEcccCcce
Confidence            999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.79  E-value=6.4e-19  Score=161.57  Aligned_cols=88  Identities=22%  Similarity=0.359  Sum_probs=78.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+..+..+++...+|+||||+++|+|.+++.+.  ..++......++.|++.||.|||+.+++||||||+||+++.++.+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~  142 (261)
T cd05072          63 LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMC  142 (261)
T ss_pred             eeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcE
Confidence            445556788889999999999999999998653  457888888999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      +|+|||++..
T Consensus       143 ~l~dfg~~~~  152 (261)
T cd05072         143 KIADFGLARV  152 (261)
T ss_pred             EECCCcccee
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=4.5e-18  Score=155.82  Aligned_cols=169  Identities=25%  Similarity=0.398  Sum_probs=129.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+++...+|+||||++|++|.+++.+...+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|
T Consensus        66 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l  145 (263)
T cd06625          66 IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKL  145 (263)
T ss_pred             eeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            45556678888999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc----------ccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         85 SDFGLCTGLKKSHR----------TDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        85 ~DFGla~~~~~~~~----------~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      +|||+++.......          +..|..+.      .....|.            +.+||...+......++......
T Consensus       146 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  225 (263)
T cd06625         146 GDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN  225 (263)
T ss_pred             eecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC
Confidence            99999875432111          11121111      1122232            26899887777776666655444


Q ss_pred             eeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        137 LVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ..+|..  ++.+..++|.++ ..+|.+|..    +.++.   .||||
T Consensus       226 ~~~~~~--~~~~~~~li~~~l~~~p~~Rpt----~~~ll---~~~~~  263 (263)
T cd06625         226 PQLPSH--VSPDARNFLRRTFVENAKKRPS----AEELL---RHFFV  263 (263)
T ss_pred             CCCCcc--CCHHHHHHHHHHhhcCcccCCC----HHHHh---hCCCC
Confidence            455543  788999999995 468999975    55666   78887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.79  E-value=7.8e-19  Score=160.33  Aligned_cols=82  Identities=28%  Similarity=0.494  Sum_probs=73.0

Q ss_pred             EEEec-CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600         10 LRMSD-PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus        10 ~~f~~-~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      ..|.. ...+|+||||+++++|.+++...  ..+++.++..++.+++.|+.++|++|++|+||||+||+++.++.++|+|
T Consensus        66 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~d  145 (257)
T cd08223          66 ESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGD  145 (257)
T ss_pred             eeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEec
Confidence            34553 34689999999999999998753  4589999999999999999999999999999999999999999999999


Q ss_pred             cCccc
Q psy17600         87 FGLCT   91 (351)
Q Consensus        87 FGla~   91 (351)
                      ||++.
T Consensus       146 f~~~~  150 (257)
T cd08223         146 LGIAR  150 (257)
T ss_pred             ccceE
Confidence            99974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.79  E-value=8.6e-19  Score=162.94  Aligned_cols=77  Identities=31%  Similarity=0.528  Sum_probs=71.2

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...+|+||||+++|+|.+++... .+++..+..++.|++.|+.|||+++|+||||||+||+++.++.++|+|||+++.
T Consensus        80 ~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  156 (283)
T cd05080          80 GKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  156 (283)
T ss_pred             CceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccc
Confidence            45689999999999999998764 599999999999999999999999999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.79  E-value=6.6e-19  Score=161.85  Aligned_cols=87  Identities=30%  Similarity=0.434  Sum_probs=79.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+.....+.+...+|+||||++||+|.+++.+.+.+++..+..++.|++.|++|+|..+|+|+||+|+||+++.++.++|
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l  143 (265)
T cd06631          64 IVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKL  143 (265)
T ss_pred             EeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEe
Confidence            34445567788899999999999999999988788999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       144 ~dfg~~~  150 (265)
T cd06631         144 IDFGCAR  150 (265)
T ss_pred             ccchhhH
Confidence            9999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.79  E-value=5.4e-19  Score=161.77  Aligned_cols=80  Identities=25%  Similarity=0.544  Sum_probs=73.1

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +++...+|+||||+++|+|.+++.+..  .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+
T Consensus        69 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~  148 (256)
T cd05082          69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGL  148 (256)
T ss_pred             EcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCcc
Confidence            566778999999999999999997643  478899999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy17600         90 CT   91 (351)
Q Consensus        90 a~   91 (351)
                      ++
T Consensus       149 ~~  150 (256)
T cd05082         149 TK  150 (256)
T ss_pred             ce
Confidence            64

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.79  E-value=4.4e-19  Score=169.92  Aligned_cols=74  Identities=32%  Similarity=0.636  Sum_probs=67.7

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|++||++ |++|..++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccce
Confidence            4579999988 789988775 4579999999999999999999999999999999999999999999999999964

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.79  E-value=7.4e-19  Score=161.99  Aligned_cols=76  Identities=36%  Similarity=0.602  Sum_probs=70.4

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+.+|+|.+++...  ..+++..+..++.|++.|+.|||+++|+||||||+||+++.++.++|+|||++.
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence            4689999999999999998763  468899999999999999999999999999999999999999999999999974

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.79  E-value=5.4e-19  Score=166.84  Aligned_cols=79  Identities=22%  Similarity=0.430  Sum_probs=67.0

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe----cCC
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK---------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL----DAR   79 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~---------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill----~~~   79 (351)
                      .+...+|+||||+. ++|.+.+...         ..+++..+..++.|++.||.|||+++|+||||||+||++    +.+
T Consensus        70 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~  148 (317)
T cd07867          70 HSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER  148 (317)
T ss_pred             cCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCC
Confidence            34668999999986 5777776421         247888999999999999999999999999999999999    566


Q ss_pred             CcEEEEecCcccc
Q psy17600         80 GHIKLSDFGLCTG   92 (351)
Q Consensus        80 ~~~kl~DFGla~~   92 (351)
                      +.+||+|||+++.
T Consensus       149 ~~~kl~DfG~a~~  161 (317)
T cd07867         149 GRVKIADMGFARL  161 (317)
T ss_pred             CcEEEeeccceec
Confidence            7999999999753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.79  E-value=6.5e-19  Score=165.40  Aligned_cols=86  Identities=31%  Similarity=0.515  Sum_probs=77.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+.....|.+...+|+||||++||+|..++.+ ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|
T Consensus        79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl  157 (296)
T cd06654          79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL  157 (296)
T ss_pred             EeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence            34444567788899999999999999998865 46889999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       158 ~dfg~~~  164 (296)
T cd06654         158 TDFGFCA  164 (296)
T ss_pred             Cccccch
Confidence            9999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.79  E-value=5e-19  Score=161.60  Aligned_cols=81  Identities=20%  Similarity=0.222  Sum_probs=72.4

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-------c
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-------H   81 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-------~   81 (351)
                      ..+.. ...|+||||+++|+|.+++.+.. .+++..+..++.|++.||.|||++||+||||||+||+++.++       .
T Consensus        68 ~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~  146 (259)
T cd05037          68 GVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPF  146 (259)
T ss_pred             eEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCcee
Confidence            33444 67899999999999999998765 789999999999999999999999999999999999999887       7


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      +||+|||++.
T Consensus       147 ~kl~Dfg~a~  156 (259)
T cd05037         147 IKLSDPGIPI  156 (259)
T ss_pred             EEeCCCCccc
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=4.2e-19  Score=187.50  Aligned_cols=86  Identities=29%  Similarity=0.443  Sum_probs=70.2

Q ss_pred             EeeeEEEec--CCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeeccCCCC
Q psy17600          6 CLKQLRMSD--PINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKL-------GFIHRDIKPD   72 (351)
Q Consensus         6 ~~~~~~f~~--~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~-------~iihrDlkp~   72 (351)
                      +..+..|.+  ...+|||||||++|+|..+|..    .+.+++..+..++.||+.||.|||..       +||||||||+
T Consensus        75 Vrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPe  154 (1021)
T PTZ00266         75 VRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQ  154 (1021)
T ss_pred             CeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHH
Confidence            344445543  4579999999999999999865    25689999999999999999999984       4999999999


Q ss_pred             cEEecCC-----------------CcEEEEecCccc
Q psy17600         73 NLLLDAR-----------------GHIKLSDFGLCT   91 (351)
Q Consensus        73 Nill~~~-----------------~~~kl~DFGla~   91 (351)
                      |||++..                 +.+||+|||++.
T Consensus       155 NILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr  190 (1021)
T PTZ00266        155 NIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK  190 (1021)
T ss_pred             HeEeecCccccccccccccccCCCCceEEccCCccc
Confidence            9999642                 347888888864

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=6.2e-19  Score=165.15  Aligned_cols=86  Identities=23%  Similarity=0.389  Sum_probs=75.4

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN   73 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~N   73 (351)
                      +..+..+.+...+|+||||+++++|.+++....            .+++..+..++.|++.|+.|||++|++||||||+|
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            344556778889999999999999999986532            35778888899999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCccc
Q psy17600         74 LLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~   91 (351)
                      |+++.++.+||+|||++.
T Consensus       160 ill~~~~~~kl~dfg~~~  177 (295)
T cd05097         160 CLVGNHYTIKIADFGMSR  177 (295)
T ss_pred             EEEcCCCcEEeccccccc
Confidence            999999999999999874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=8.6e-19  Score=160.34  Aligned_cols=86  Identities=31%  Similarity=0.478  Sum_probs=78.5

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+...+|++|||+++++|..++... ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|
T Consensus        63 ~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l  142 (262)
T cd06613          63 VAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKL  142 (262)
T ss_pred             hceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEE
Confidence            34455678888999999999999999998776 78999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       143 ~d~g~~~  149 (262)
T cd06613         143 ADFGVSA  149 (262)
T ss_pred             Cccccch
Confidence            9999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.79  E-value=6.6e-19  Score=166.77  Aligned_cols=78  Identities=22%  Similarity=0.460  Sum_probs=71.1

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ....++|+||+++|+|.+++.+. ..+++.....++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.
T Consensus        80 ~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~  158 (316)
T cd05108          80 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKL  158 (316)
T ss_pred             CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccc
Confidence            35688999999999999999764 4578888899999999999999999999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.79  E-value=6.8e-19  Score=161.90  Aligned_cols=85  Identities=24%  Similarity=0.411  Sum_probs=75.9

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ..+..+.+...+|+||||+++|+|.+++...  ..+++.....++.|++.||.|||++|++||||||+||+++.++.+||
T Consensus        66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl  145 (263)
T cd05052          66 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV  145 (263)
T ss_pred             heEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEe
Confidence            3445567778899999999999999998753  35788889999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       146 ~df~~~~  152 (263)
T cd05052         146 ADFGLSR  152 (263)
T ss_pred             CCCcccc
Confidence            9999974

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.79  E-value=5.7e-19  Score=163.99  Aligned_cols=88  Identities=18%  Similarity=0.288  Sum_probs=76.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      .+..+..+.+...+++++||+.+++|..++...                ..++...+..++.|++.||.|+|++||+|||
T Consensus        70 iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~d  149 (283)
T cd05091          70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKD  149 (283)
T ss_pred             cCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            344555677888899999999999999998532                2477888889999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCcccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |||+||+++.++.+||+|||+++.
T Consensus       150 lkp~Nil~~~~~~~kl~Dfg~~~~  173 (283)
T cd05091         150 LATRNVLVFDKLNVKISDLGLFRE  173 (283)
T ss_pred             cchhheEecCCCceEecccccccc
Confidence            999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.79  E-value=1.1e-18  Score=159.36  Aligned_cols=88  Identities=32%  Similarity=0.533  Sum_probs=79.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      ..+..+..|.+...+|+|||||+||+|.+++.+.  ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.
T Consensus        60 ~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~  139 (256)
T cd08221          60 NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGL  139 (256)
T ss_pred             CeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCC
Confidence            3455566788899999999999999999999764  46899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      +||+|||++.
T Consensus       140 ~kl~d~~~~~  149 (256)
T cd08221         140 IKLGDFGISK  149 (256)
T ss_pred             EEECcCcceE
Confidence            9999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0577|consensus

Probab=99.79  E-value=5.6e-20  Score=179.61  Aligned_cols=79  Identities=32%  Similarity=0.430  Sum_probs=66.9

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +|-.....|||||||-| +-.+++. .+.++-|-.+..++.+.+.||.|||+.+.||||||..|||++..|.|||+|||.
T Consensus        94 CyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGS  172 (948)
T KOG0577|consen   94 CYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGS  172 (948)
T ss_pred             eeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccc
Confidence            34555667899999975 4555553 235688888889999999999999999999999999999999999999999998


Q ss_pred             c
Q psy17600         90 C   90 (351)
Q Consensus        90 a   90 (351)
                      |
T Consensus       173 A  173 (948)
T KOG0577|consen  173 A  173 (948)
T ss_pred             h
Confidence            6

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.79  E-value=8.7e-19  Score=166.84  Aligned_cols=87  Identities=22%  Similarity=0.422  Sum_probs=78.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++..+..|++...+|+||||+++|+|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.
T Consensus        60 niv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~  139 (327)
T cd08227          60 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK  139 (327)
T ss_pred             CeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCc
Confidence            4455666788999999999999999999998653  45899999999999999999999999999999999999999999


Q ss_pred             EEEEecCcc
Q psy17600         82 IKLSDFGLC   90 (351)
Q Consensus        82 ~kl~DFGla   90 (351)
                      +++.||+.+
T Consensus       140 ~~l~~~~~~  148 (327)
T cd08227         140 VYLSGLRSN  148 (327)
T ss_pred             EEEcccchh
Confidence            999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.78  E-value=9.6e-19  Score=163.93  Aligned_cols=87  Identities=25%  Similarity=0.416  Sum_probs=76.0

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-----------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-----------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      +..+..+.+...+|+||||+++|+|..++....           .+++..+..++.|++.|+.|||++|++||||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni  161 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC  161 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence            344456778888999999999999999987643           356678899999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCcccc
Q psy17600         75 LLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~~   92 (351)
                      +++.++.++|+|||+++.
T Consensus       162 li~~~~~~~l~dfg~~~~  179 (296)
T cd05095         162 LVGKNYTIKIADFGMSRN  179 (296)
T ss_pred             EEcCCCCEEeccCccccc
Confidence            999999999999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.78  E-value=2.7e-19  Score=163.35  Aligned_cols=87  Identities=38%  Similarity=0.585  Sum_probs=79.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||+.+++|.+++.+...+++..+..++.|++.||.+||+++++|+||||+||+++.++.++|
T Consensus        60 i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l  139 (260)
T PF00069_consen   60 IVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKL  139 (260)
T ss_dssp             BCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34455567788999999999999999999987788999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||.+.
T Consensus       140 ~Dfg~~~  146 (260)
T PF00069_consen  140 IDFGSSV  146 (260)
T ss_dssp             SSGTTTE
T ss_pred             ccccccc
Confidence            9999975

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.78  E-value=4.4e-19  Score=166.36  Aligned_cols=80  Identities=38%  Similarity=0.649  Sum_probs=73.4

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      .|.+....|+||||+++++|..++.. +.+++..+..++.|++.|+.|||+++|+||||||+||+++.++.++|+|||++
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~  165 (292)
T cd06658          87 SYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFC  165 (292)
T ss_pred             heecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcch
Confidence            46677889999999999999998754 56899999999999999999999999999999999999999999999999986


Q ss_pred             c
Q psy17600         91 T   91 (351)
Q Consensus        91 ~   91 (351)
                      .
T Consensus       166 ~  166 (292)
T cd06658         166 A  166 (292)
T ss_pred             h
Confidence            4

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0587|consensus

Probab=99.78  E-value=4e-19  Score=180.33  Aligned_cols=78  Identities=35%  Similarity=0.586  Sum_probs=72.0

Q ss_pred             CCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+.||||||||.||+..+++++  ...+.|....+++.+++.|+.|||.+.+||||+|=.|||++.+|.+||+|||++..
T Consensus        93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ  172 (953)
T KOG0587|consen   93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  172 (953)
T ss_pred             CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence            4689999999999999999875  35688999999999999999999999999999999999999999999999999753

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.78  E-value=1e-18  Score=160.33  Aligned_cols=87  Identities=22%  Similarity=0.383  Sum_probs=77.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||+.+|+|.+++... ..+++..+..++.|++.||.|||++|++|+||||.||+++.++.+|
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~k  140 (256)
T cd05113          61 LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVK  140 (256)
T ss_pred             eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEE
Confidence            344455567778899999999999999999764 4689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       141 l~d~g~~~  148 (256)
T cd05113         141 VSDFGLSR  148 (256)
T ss_pred             ECCCccce
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.78  E-value=1.3e-18  Score=163.54  Aligned_cols=86  Identities=31%  Similarity=0.519  Sum_probs=77.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|.+...+|+||||++||+|..++.+ ..+++.++..++.|++.|+.|||++|++|+||||+||+++.++.++|
T Consensus        78 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl  156 (296)
T cd06655          78 IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKL  156 (296)
T ss_pred             eeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            34455567888899999999999999998865 46899999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       157 ~dfg~~~  163 (296)
T cd06655         157 TDFGFCA  163 (296)
T ss_pred             ccCccch
Confidence            9999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0193|consensus

Probab=99.78  E-value=2e-19  Score=176.44  Aligned_cols=86  Identities=27%  Similarity=0.385  Sum_probs=75.0

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++++..+-....+-||..+|+|.+|+++|+-. ..|.-...+.++.||+.|+.|||.++|||||||..||++.+++.|||
T Consensus       450 IlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkI  529 (678)
T KOG0193|consen  450 ILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKI  529 (678)
T ss_pred             heeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEE
Confidence            45555555555569999999999999999743 46778888999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +||||+.
T Consensus       530 gDFGLat  536 (678)
T KOG0193|consen  530 GDFGLAT  536 (678)
T ss_pred             eccccee
Confidence            9999974

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.78  E-value=8.4e-19  Score=162.65  Aligned_cols=88  Identities=25%  Similarity=0.437  Sum_probs=76.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD   77 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~   77 (351)
                      .+..+..+.+....|+||||++||+|.+++....       .+++..+..++.|++.|+.|||+++++||||||+||+++
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~  150 (277)
T cd05036          71 IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLT  150 (277)
T ss_pred             EeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEe
Confidence            3444555777888999999999999999997643       478899999999999999999999999999999999998


Q ss_pred             CCC---cEEEEecCcccc
Q psy17600         78 ARG---HIKLSDFGLCTG   92 (351)
Q Consensus        78 ~~~---~~kl~DFGla~~   92 (351)
                      .++   .+||+|||+++.
T Consensus       151 ~~~~~~~~kl~dfg~~~~  168 (277)
T cd05036         151 CKGPGRVAKIADFGMARD  168 (277)
T ss_pred             ccCCCcceEeccCccccc
Confidence            665   589999999754

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.78  E-value=8.6e-19  Score=161.05  Aligned_cols=88  Identities=26%  Similarity=0.453  Sum_probs=79.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~k   83 (351)
                      .+..+..+++...+|+||||++|++|.+++.+.+.+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .++
T Consensus        65 iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~  144 (268)
T cd06630          65 IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLR  144 (268)
T ss_pred             eehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            4445556788899999999999999999998888899999999999999999999999999999999999998776 589


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       145 l~dfg~~~~  153 (268)
T cd06630         145 IADFGAAAR  153 (268)
T ss_pred             Ecccccccc
Confidence            999999743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.78  E-value=1.4e-18  Score=161.41  Aligned_cols=86  Identities=22%  Similarity=0.262  Sum_probs=73.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---   80 (351)
                      .+..+..+.+....|+|||||++|+|..++.+ .+.+++..+..++.|++.||+|||+++|+||||||+||+++..+   
T Consensus        78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence            44555566777889999999999999999865 45789999999999999999999999999999999999997643   


Q ss_pred             ----cEEEEecCcc
Q psy17600         81 ----HIKLSDFGLC   90 (351)
Q Consensus        81 ----~~kl~DFGla   90 (351)
                          .+|++|||++
T Consensus       158 ~~~~~~kl~d~g~~  171 (274)
T cd05076         158 GTSPFIKLSDPGVS  171 (274)
T ss_pred             CccceeeecCCccc
Confidence                3677888764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.78  E-value=1.3e-18  Score=160.27  Aligned_cols=87  Identities=20%  Similarity=0.304  Sum_probs=78.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+.....+++....|+||||+++|+|.+++... +.+++..+..++.|++.|+.|||++|++||||||+||+++.++.+|
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~k  147 (268)
T cd05063          68 IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECK  147 (268)
T ss_pred             eeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEE
Confidence            445566778889999999999999999998754 5689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       148 l~dfg~~~  155 (268)
T cd05063         148 VSDFGLSR  155 (268)
T ss_pred             ECCCccce
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.78  E-value=2.2e-18  Score=157.86  Aligned_cols=81  Identities=27%  Similarity=0.461  Sum_probs=74.6

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +......|+||||+.+|+|.+++.+...+++..+..++.|++.|+.|||.++++|+||||+||+++.++.+||+|||+++
T Consensus        64 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~  143 (257)
T cd05060          64 VCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSR  143 (257)
T ss_pred             EEcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccc
Confidence            33456789999999999999999887789999999999999999999999999999999999999999999999999875


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       144 ~  144 (257)
T cd05060         144 A  144 (257)
T ss_pred             e
Confidence            3

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.78  E-value=1.1e-18  Score=160.49  Aligned_cols=86  Identities=27%  Similarity=0.480  Sum_probs=76.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +..+..|.+...+|++|||++|++|.+++..    ...+++..+..++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus        65 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~  144 (267)
T cd08229          65 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV  144 (267)
T ss_pred             hhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC
Confidence            3345567788899999999999999998863    345789999999999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      ++|+|||++.
T Consensus       145 ~~l~dfg~~~  154 (267)
T cd08229         145 VKLGDLGLGR  154 (267)
T ss_pred             EEECcchhhh
Confidence            9999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.78  E-value=1.2e-18  Score=162.29  Aligned_cols=88  Identities=27%  Similarity=0.430  Sum_probs=79.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~   82 (351)
                      ..+..+..+++...+|+||||+++|+|..++.+.+.+++..+..++.+++.|+.|||+ .+++||||||+||+++.++.+
T Consensus        64 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~  143 (284)
T cd06620          64 YIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQI  143 (284)
T ss_pred             CcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcE
Confidence            3445566788889999999999999999999887889999999999999999999997 689999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      +|+|||++.
T Consensus       144 ~l~d~gl~~  152 (284)
T cd06620         144 KLCDFGVSG  152 (284)
T ss_pred             EEccCCccc
Confidence            999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4279|consensus

Probab=99.78  E-value=2.1e-19  Score=178.15  Aligned_cols=84  Identities=35%  Similarity=0.564  Sum_probs=74.6

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCcEEEE
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKK-DTL--SEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHIKLS   85 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l--~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~~kl~   85 (351)
                      .++.....+-|.||-++||+|.++|+.+ +++  .|...-+|..||+.||.|||.+.|||||||-+|+|++ -.|.+||.
T Consensus       639 Gs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKIS  718 (1226)
T KOG4279|consen  639 GSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKIS  718 (1226)
T ss_pred             hccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEec
Confidence            4566677788999999999999999753 677  7888999999999999999999999999999999997 46899999


Q ss_pred             ecCccccC
Q psy17600         86 DFGLCTGL   93 (351)
Q Consensus        86 DFGla~~~   93 (351)
                      |||.++.+
T Consensus       719 DFGTsKRL  726 (1226)
T KOG4279|consen  719 DFGTSKRL  726 (1226)
T ss_pred             ccccchhh
Confidence            99998754

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.78  E-value=5.3e-19  Score=166.18  Aligned_cols=82  Identities=37%  Similarity=0.604  Sum_probs=74.8

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      +..|......|+||||+++++|..++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||
T Consensus        84 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg  162 (297)
T cd06659          84 YKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFG  162 (297)
T ss_pred             hhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeech
Confidence            3457778899999999999999987754 568999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      ++.
T Consensus       163 ~~~  165 (297)
T cd06659         163 FCA  165 (297)
T ss_pred             hHh
Confidence            864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.78  E-value=1.4e-17  Score=155.60  Aligned_cols=181  Identities=23%  Similarity=0.297  Sum_probs=133.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..|+....+|+||||++|++|..++.+ ...+++..+..++.|++.|+.|||+++++||||||+||+++.++.++
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~k  150 (292)
T cd06644          71 IVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIK  150 (292)
T ss_pred             EeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEE
Confidence            44555667888899999999999999888754 45689999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||++.......       .+..|..+.           +....|+            +.+||...++...+.++...
T Consensus       151 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  230 (292)
T cd06644         151 LADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS  230 (292)
T ss_pred             EccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC
Confidence            99999986432211       111222221           1112333            25888887777776666543


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                      .. ...+....++.+..++|.++ ..+|++|..    .+++.   .||||..++|....+.
T Consensus       231 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il---~~~~~~~~~~~~~~~~  283 (292)
T cd06644         231 EP-PTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLL---EHPFVSSVTSNRPLRE  283 (292)
T ss_pred             CC-ccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHh---cCccccccccchhHHH
Confidence            21 11222234688999999995 469999975    45666   8999999999875443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.78  E-value=1.6e-18  Score=160.70  Aligned_cols=87  Identities=29%  Similarity=0.388  Sum_probs=79.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+.....|++...+|+||||++++.|..++.....+++..+..++.|++.||.|||++|++||||||+||+++.++.++|
T Consensus        62 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l  141 (286)
T cd07847          62 LVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKL  141 (286)
T ss_pred             EeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEE
Confidence            34445568888999999999999999888877677999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       142 ~dfg~~~  148 (286)
T cd07847         142 CDFGFAR  148 (286)
T ss_pred             Cccccce
Confidence            9999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.78  E-value=1.9e-18  Score=158.62  Aligned_cols=87  Identities=21%  Similarity=0.285  Sum_probs=78.0

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+...+|+||||++|++|.+++....  .+++.....++.|++.|+.++|++|++||||||+||+++.++.++
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~  143 (261)
T cd05068          64 IQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICK  143 (261)
T ss_pred             cceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEE
Confidence            344456778888999999999999999997644  688999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       144 l~dfg~~~~  152 (261)
T cd05068         144 VADFGLARV  152 (261)
T ss_pred             ECCcceEEE
Confidence            999999754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.77  E-value=1.5e-18  Score=165.67  Aligned_cols=89  Identities=20%  Similarity=0.293  Sum_probs=77.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      .++..+..+.+...+|++|||+++|+|.+++.+..                .++......++.|++.||.|||.+|++||
T Consensus        79 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~  158 (334)
T cd05100          79 NIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHR  158 (334)
T ss_pred             CeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            34555566778888999999999999999997532                35667778899999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+||+++.++.+||+|||+++.
T Consensus       159 dlkp~Nill~~~~~~kL~Dfg~~~~  183 (334)
T cd05100         159 DLAARNVLVTEDNVMKIADFGLARD  183 (334)
T ss_pred             ccccceEEEcCCCcEEECCccccee
Confidence            9999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.77  E-value=2e-18  Score=158.32  Aligned_cols=87  Identities=26%  Similarity=0.473  Sum_probs=77.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      .+..+..|.+...+|+||||++||+|..++.+    ...+++..+..++.+++.|+.|||+.|++|+||+|+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~  143 (267)
T cd08224          64 VIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG  143 (267)
T ss_pred             eeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC
Confidence            34445567888899999999999999998864    24578999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccc
Q psy17600         81 HIKLSDFGLCT   91 (351)
Q Consensus        81 ~~kl~DFGla~   91 (351)
                      .++|+|||++.
T Consensus       144 ~~~l~d~~~~~  154 (267)
T cd08224         144 VVKLGDLGLGR  154 (267)
T ss_pred             cEEEeccceee
Confidence            99999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.77  E-value=1.8e-18  Score=159.42  Aligned_cols=88  Identities=19%  Similarity=0.337  Sum_probs=78.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||++||+|.+++.+. +.++...+..++.|++.|+.|||+++++||||||+||+++.++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~  146 (267)
T cd05066          67 IIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCK  146 (267)
T ss_pred             cceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEE
Confidence            445556677888999999999999999999764 4678999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       147 l~dfg~~~~  155 (267)
T cd05066         147 VSDFGLSRV  155 (267)
T ss_pred             eCCCCcccc
Confidence            999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.77  E-value=8.7e-19  Score=164.51  Aligned_cols=75  Identities=19%  Similarity=0.428  Sum_probs=64.7

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      .|++||++. .++.+.+......++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||+|+..
T Consensus       102 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~  176 (294)
T PHA02882        102 RFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHF  176 (294)
T ss_pred             EEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceee
Confidence            478888874 466666665555788889999999999999999999999999999999999999999999998643

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.77  E-value=1.3e-18  Score=159.88  Aligned_cols=87  Identities=26%  Similarity=0.454  Sum_probs=76.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      .+..+..+.+...+|+||||+++|+|.+++..    ...+++..+..++.|++.|+.|||+++++|+||||+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~  143 (267)
T cd08228          64 VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG  143 (267)
T ss_pred             eeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC
Confidence            34445567788899999999999999988852    34578999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccc
Q psy17600         81 HIKLSDFGLCT   91 (351)
Q Consensus        81 ~~kl~DFGla~   91 (351)
                      .++|+|||++.
T Consensus       144 ~~~l~d~g~~~  154 (267)
T cd08228         144 VVKLGDLGLGR  154 (267)
T ss_pred             CEEECccccce
Confidence            99999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.77  E-value=1.5e-18  Score=160.27  Aligned_cols=86  Identities=23%  Similarity=0.347  Sum_probs=77.2

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD---------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL   76 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~---------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill   76 (351)
                      +..+..+.+....|+||||+++|+|.+++....         .+++..+..++.|++.||.|||+++|+||||||+||++
T Consensus        71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili  150 (275)
T cd05046          71 VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV  150 (275)
T ss_pred             eeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE
Confidence            334445677788999999999999999997655         68999999999999999999999999999999999999


Q ss_pred             cCCCcEEEEecCccc
Q psy17600         77 DARGHIKLSDFGLCT   91 (351)
Q Consensus        77 ~~~~~~kl~DFGla~   91 (351)
                      +.++.++++|||++.
T Consensus       151 ~~~~~~~l~~~~~~~  165 (275)
T cd05046         151 SSQREVKVSLLSLSK  165 (275)
T ss_pred             eCCCcEEEccccccc
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.77  E-value=2.5e-18  Score=156.76  Aligned_cols=87  Identities=29%  Similarity=0.446  Sum_probs=78.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+++||+.+++|.+++.. ...+++..+..++.|++.|+.|||..+++|+||+|.||+++.++.++
T Consensus        60 i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~  139 (256)
T cd06612          60 IVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAK  139 (256)
T ss_pred             EeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEE
Confidence            34455568888999999999999999999875 45689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       140 l~dfg~~~  147 (256)
T cd06612         140 LADFGVSG  147 (256)
T ss_pred             Ecccccch
Confidence            99999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.77  E-value=5.4e-18  Score=159.95  Aligned_cols=174  Identities=23%  Similarity=0.405  Sum_probs=124.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ..+..+..+++...+|+||||+.+ +|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        65 ~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~  143 (309)
T cd07872          65 NIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGEL  143 (309)
T ss_pred             CcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE
Confidence            345566678888999999999975 888887654 357889999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCC--
Q psy17600         83 KLSDFGLCTGLKKSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWR--  134 (351)
Q Consensus        83 kl~DFGla~~~~~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~--  134 (351)
                      ||+|||++........       +..|..+.       +....|.            +.+||.+.+..+....+....  
T Consensus       144 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  223 (309)
T cd07872         144 KLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGT  223 (309)
T ss_pred             EECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence            9999999865322111       11122211       1112222            368998887766554443210  


Q ss_pred             ---------------CceeCCCC---------CCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        135 ---------------DTLVFPPE---------VPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       135 ---------------~~~~~p~~---------~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                                     ....+|..         ..++++++++|.+++ .+|.+|.+    ++++.   .||||+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l---~h~~~~~~  292 (309)
T cd07872         224 PTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAM---KHAYFRSL  292 (309)
T ss_pred             CCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHh---cChhhhhc
Confidence                           01122221         236889999999954 69999996    56666   89999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.77  E-value=1.7e-18  Score=162.70  Aligned_cols=86  Identities=33%  Similarity=0.523  Sum_probs=77.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|.+...+|+||||++|++|.+++.+ ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|
T Consensus        78 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l  156 (297)
T cd06656          78 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKL  156 (297)
T ss_pred             EeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            34455568888899999999999999999865 46889999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       157 ~Dfg~~~  163 (297)
T cd06656         157 TDFGFCA  163 (297)
T ss_pred             CcCccce
Confidence            9999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0984|consensus

Probab=99.77  E-value=6.6e-19  Score=152.91  Aligned_cols=89  Identities=24%  Similarity=0.421  Sum_probs=74.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLL----MKKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l----~~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~   78 (351)
                      |.++-|..+-+...+|+.||.|. -+|..+-    .+.+.++|...-.++..++.||.|||++ .|||||+||.|||++.
T Consensus       106 f~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~  184 (282)
T KOG0984|consen  106 FTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY  184 (282)
T ss_pred             eEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc
Confidence            34555566677889999999985 4555443    3557889999999999999999999975 8999999999999999


Q ss_pred             CCcEEEEecCccccC
Q psy17600         79 RGHIKLSDFGLCTGL   93 (351)
Q Consensus        79 ~~~~kl~DFGla~~~   93 (351)
                      +|++|+||||.+..+
T Consensus       185 ~GqVKiCDFGIsG~L  199 (282)
T KOG0984|consen  185 DGQVKICDFGISGYL  199 (282)
T ss_pred             CCcEEEcccccceee
Confidence            999999999997544

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.77  E-value=2.8e-18  Score=159.42  Aligned_cols=80  Identities=29%  Similarity=0.566  Sum_probs=71.5

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      ++...+|+||||++||+|.+++..    ...+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg  169 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG  169 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCC
Confidence            355679999999999999988752    3468889999999999999999999999999999999999999999999999


Q ss_pred             cccc
Q psy17600         89 LCTG   92 (351)
Q Consensus        89 la~~   92 (351)
                      ++..
T Consensus       170 ~~~~  173 (286)
T cd06638         170 VSAQ  173 (286)
T ss_pred             ceee
Confidence            9753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.77  E-value=2e-18  Score=169.49  Aligned_cols=52  Identities=25%  Similarity=0.340  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         40 LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        40 l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ++......++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~  287 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR  287 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcce
Confidence            4566678889999999999999999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.77  E-value=1.8e-18  Score=160.52  Aligned_cols=86  Identities=36%  Similarity=0.520  Sum_probs=76.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+..+..+++...+|+||||+. ++|.+++...   ..+++..+..++.|++.||.|||+++++||||||+||+++.++.
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~  139 (285)
T cd07861          61 IVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGV  139 (285)
T ss_pred             EeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCc
Confidence            4455567888899999999997 6888887542   46899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      ++|+|||++.
T Consensus       140 ~~l~dfg~~~  149 (285)
T cd07861         140 IKLADFGLAR  149 (285)
T ss_pred             EEECccccee
Confidence            9999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.77  E-value=3e-18  Score=157.65  Aligned_cols=77  Identities=25%  Similarity=0.485  Sum_probs=69.5

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      ...|+||||+++|+|..++...      ..+++..+..++.|++.||.|||+++++||||||+||++++++.+||+|||+
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence            3479999999999999988532      3578999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      ++.
T Consensus       160 ~~~  162 (273)
T cd05035         160 SKK  162 (273)
T ss_pred             eee
Confidence            753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.77  E-value=2.7e-18  Score=158.02  Aligned_cols=79  Identities=22%  Similarity=0.430  Sum_probs=71.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .....|+||||+++|+|.+++.+.  ..+++..+..++.|++.||.|+|+++++||||||+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~  150 (262)
T cd05071          71 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR  150 (262)
T ss_pred             CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCcee
Confidence            456689999999999999999753  357888999999999999999999999999999999999999999999999875


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       151 ~  151 (262)
T cd05071         151 L  151 (262)
T ss_pred             e
Confidence            3

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.77  E-value=3.5e-18  Score=171.27  Aligned_cols=77  Identities=26%  Similarity=0.466  Sum_probs=67.0

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD------------------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIK   70 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~------------------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlk   70 (351)
                      ....||||||+++|+|.+++....                        .++...++.++.|++.||.|+|+++|+|||||
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLK  336 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIK  336 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            456899999999999999886421                        12456678889999999999999999999999


Q ss_pred             CCcEEecCCCcEEEEecCccc
Q psy17600         71 PDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~   91 (351)
                      |+||+++.++.+||+|||++.
T Consensus       337 p~NILl~~~~~~kL~DFGla~  357 (507)
T PLN03224        337 PENLLVTVDGQVKIIDFGAAV  357 (507)
T ss_pred             hHhEEECCCCcEEEEeCcCcc
Confidence            999999999999999999974

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.77  E-value=3.5e-18  Score=157.51  Aligned_cols=86  Identities=20%  Similarity=0.347  Sum_probs=77.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+...+|+||||+++|+|.+++... +.+++..+..++.|++.|+.|||++|++|+||||+||+++.++.++|
T Consensus        68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl  147 (269)
T cd05065          68 IHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKV  147 (269)
T ss_pred             ceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEE
Confidence            44555677888999999999999999998753 56889999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       148 ~dfg~~~  154 (269)
T cd05065         148 SDFGLSR  154 (269)
T ss_pred             CCCcccc
Confidence            9999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.77  E-value=2.7e-18  Score=156.87  Aligned_cols=83  Identities=25%  Similarity=0.379  Sum_probs=74.5

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      +..+.+ ..+|+||||+++|+|.+.+.+..  .+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|
T Consensus        62 ~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~d  140 (257)
T cd05040          62 YGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGD  140 (257)
T ss_pred             eEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecc
Confidence            334555 78999999999999999997654  688999999999999999999999999999999999999999999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||++..
T Consensus       141 fg~~~~  146 (257)
T cd05040         141 FGLMRA  146 (257)
T ss_pred             cccccc
Confidence            999754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.77  E-value=3.8e-18  Score=157.04  Aligned_cols=87  Identities=18%  Similarity=0.331  Sum_probs=77.8

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+...+|+||||+++|+|.+++... +.+++..+..++.|++.|+.|||+++|+|+||||+||+++.++.++|
T Consensus        68 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l  147 (266)
T cd05033          68 IRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKV  147 (266)
T ss_pred             ceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEE
Confidence            34455567788899999999999999998764 46899999999999999999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||++..
T Consensus       148 ~dfg~~~~  155 (266)
T cd05033         148 SDFGLSRR  155 (266)
T ss_pred             Cccchhhc
Confidence            99999754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.77  E-value=3.1e-18  Score=158.82  Aligned_cols=87  Identities=33%  Similarity=0.508  Sum_probs=79.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..+.+...+|+||||++||+|.+++.. +.+++..+..++.|++.|+.|+|+++++|+||+|+||+++.++.++
T Consensus        63 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~  141 (277)
T cd06640          63 YVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVK  141 (277)
T ss_pred             CEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEE
Confidence            456666778889999999999999999998865 5689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      ++|||++.
T Consensus       142 l~dfg~~~  149 (277)
T cd06640         142 LADFGVAG  149 (277)
T ss_pred             Ecccccce
Confidence            99999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.77  E-value=2.1e-18  Score=160.30  Aligned_cols=80  Identities=28%  Similarity=0.551  Sum_probs=72.6

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .+...+|+||||+++|+|.+++.+. ..+++..+..++.|++.||.|||.+|++||||||+||+++.++.+||+|||++.
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          77 AGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             CCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence            3446799999999999999999754 468999999999999999999999999999999999999999999999999975


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       157 ~  157 (284)
T cd05081         157 V  157 (284)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.77  E-value=3.5e-18  Score=158.62  Aligned_cols=77  Identities=32%  Similarity=0.563  Sum_probs=70.4

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ...+|++|||+++|+|.+++...  ..+++..+..++.|++.|+.|||++||+|+||+|+||+++.++.++|+|||++.
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence            45789999999999999998653  457888899999999999999999999999999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.76  E-value=2.4e-18  Score=157.59  Aligned_cols=85  Identities=22%  Similarity=0.299  Sum_probs=76.6

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ..+..+.+...+|+||||+++|+|.+++.+.  ..+++.....++.|++.|+.|||++|++||||||+||+++.++.+||
T Consensus        66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl  145 (261)
T cd05148          66 SLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKV  145 (261)
T ss_pred             heeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEE
Confidence            3445577888899999999999999999753  45789999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       146 ~d~g~~~  152 (261)
T cd05148         146 ADFGLAR  152 (261)
T ss_pred             ccccchh
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.76  E-value=4.3e-18  Score=155.04  Aligned_cols=87  Identities=26%  Similarity=0.444  Sum_probs=78.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+....|+||||+.|++|.+++.+. ..+++..+..++.+++.|+.|||+++++||||||+||+++.++.++
T Consensus        54 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~  133 (251)
T cd05041          54 IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLK  133 (251)
T ss_pred             eEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEE
Confidence            344556788889999999999999999999653 4678888899999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       134 l~d~g~~~  141 (251)
T cd05041         134 ISDFGMSR  141 (251)
T ss_pred             Eeeccccc
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.76  E-value=3.3e-18  Score=159.53  Aligned_cols=86  Identities=28%  Similarity=0.472  Sum_probs=76.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+++....|+||||+.+ +|.+++.+. ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.+|
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~k  143 (291)
T cd07844          65 IVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELK  143 (291)
T ss_pred             eeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEE
Confidence            44455568888999999999985 999988754 4678999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       144 l~dfg~~~  151 (291)
T cd07844         144 LADFGLAR  151 (291)
T ss_pred             ECcccccc
Confidence            99999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.76  E-value=1.1e-18  Score=161.99  Aligned_cols=85  Identities=25%  Similarity=0.440  Sum_probs=74.7

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..|++...+|+||||+. ++|..++.+ .+.+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l  140 (284)
T cd07839          62 VRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKL  140 (284)
T ss_pred             eeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEE
Confidence            333445778889999999997 578887764 467899999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       141 ~dfg~~~  147 (284)
T cd07839         141 ADFGLAR  147 (284)
T ss_pred             Cccchhh
Confidence            9999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.76  E-value=1.8e-18  Score=159.40  Aligned_cols=76  Identities=24%  Similarity=0.483  Sum_probs=68.6

Q ss_pred             cEEEEEecCCCCCHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMK------KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~------~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      ..+++|||+++|+|..++..      ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence            57999999999999988742      234789999999999999999999999999999999999999999999999997


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      +.
T Consensus       160 ~~  161 (272)
T cd05075         160 KK  161 (272)
T ss_pred             cc
Confidence            53

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.76  E-value=4.2e-18  Score=154.97  Aligned_cols=86  Identities=28%  Similarity=0.492  Sum_probs=76.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+....|+||||+++|+|.+++... ..+++.....++.+++.|+.|+|++|++||||||+||+++.++.++|
T Consensus        55 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l  134 (250)
T cd05085          55 VKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKI  134 (250)
T ss_pred             CeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEE
Confidence            33444577788899999999999999988653 45788999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       135 ~d~g~~~  141 (250)
T cd05085         135 SDFGMSR  141 (250)
T ss_pred             CCCccce
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.76  E-value=4.1e-18  Score=156.30  Aligned_cols=81  Identities=23%  Similarity=0.441  Sum_probs=72.7

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +......|+||||+++++|.+++...  ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+
T Consensus        69 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~  148 (260)
T cd05070          69 VVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGL  148 (260)
T ss_pred             EECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCcee
Confidence            33456789999999999999998753  3588999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      +..
T Consensus       149 ~~~  151 (260)
T cd05070         149 ARL  151 (260)
T ss_pred             eee
Confidence            753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.76  E-value=2.9e-18  Score=161.71  Aligned_cols=87  Identities=26%  Similarity=0.417  Sum_probs=77.9

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..|.+...+|++|||+++|+|.+++.+.  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+|
T Consensus        62 ~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~k  141 (314)
T cd08216          62 LPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVV  141 (314)
T ss_pred             hhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceE
Confidence            34455688889999999999999999998753  4588999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      ++|||.+..
T Consensus       142 l~d~~~~~~  150 (314)
T cd08216         142 LSGLRYSVS  150 (314)
T ss_pred             EecCcccee
Confidence            999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.76  E-value=4.5e-18  Score=158.75  Aligned_cols=86  Identities=26%  Similarity=0.475  Sum_probs=74.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+++....|+||||+. ++|...+.. ...+++..++.++.|++.||.|||++||+||||||+||+++.++.++
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~  143 (291)
T cd07870          65 IVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELK  143 (291)
T ss_pred             EeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEE
Confidence            3445556788889999999996 677776654 35678888999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       144 l~Dfg~~~  151 (291)
T cd07870         144 LADFGLAR  151 (291)
T ss_pred             Eecccccc
Confidence            99999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=4e-18  Score=155.83  Aligned_cols=86  Identities=20%  Similarity=0.360  Sum_probs=77.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+....|+||||+++++|.+++....  .+++..+..++.|++.|+.|||++|++||||||+||+++.++.++
T Consensus        63 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~  142 (256)
T cd05039          63 VQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAK  142 (256)
T ss_pred             eeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEE
Confidence            334445667889999999999999999997665  689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       143 l~d~g~~~  150 (256)
T cd05039         143 VSDFGLAK  150 (256)
T ss_pred             Eccccccc
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.76  E-value=4.6e-18  Score=156.41  Aligned_cols=87  Identities=26%  Similarity=0.377  Sum_probs=75.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      +..+..+.+....|+||||++||+|.+++.+.       ..+++..+..++.|++.|+.|+|+++++|+||||+||+++.
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~  141 (269)
T cd05044          62 VKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSE  141 (269)
T ss_pred             eeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEec
Confidence            34445677888899999999999999999642       23678888899999999999999999999999999999998


Q ss_pred             CC-----cEEEEecCcccc
Q psy17600         79 RG-----HIKLSDFGLCTG   92 (351)
Q Consensus        79 ~~-----~~kl~DFGla~~   92 (351)
                      ++     .++++|||+++.
T Consensus       142 ~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044         142 KGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             CCCCCCcceEECCcccccc
Confidence            77     899999999753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0666|consensus

Probab=99.76  E-value=4.5e-19  Score=162.10  Aligned_cols=77  Identities=21%  Similarity=0.426  Sum_probs=69.2

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC----CcEEEE
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR----GHIKLS   85 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~----~~~kl~   85 (351)
                      +..+||++||.+ -||.++|+-+     ..++...++.++.||+.|+.|||++-|+||||||.|||+..+    |.+||+
T Consensus       100 d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  100 DKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             CceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence            778999999997 5999988632     457889999999999999999999999999999999999877    899999


Q ss_pred             ecCcccc
Q psy17600         86 DFGLCTG   92 (351)
Q Consensus        86 DFGla~~   92 (351)
                      |||+++.
T Consensus       179 DlGlaR~  185 (438)
T KOG0666|consen  179 DLGLARL  185 (438)
T ss_pred             cccHHHH
Confidence            9999864

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.76  E-value=4.8e-18  Score=155.98  Aligned_cols=81  Identities=26%  Similarity=0.442  Sum_probs=72.2

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +......|+||||+.+|+|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+
T Consensus        69 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~  148 (260)
T cd05069          69 VVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGL  148 (260)
T ss_pred             EEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCcc
Confidence            335567899999999999999997542  478888999999999999999999999999999999999999999999998


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      +..
T Consensus       149 ~~~  151 (260)
T cd05069         149 ARL  151 (260)
T ss_pred             ceE
Confidence            753

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.76  E-value=1.7e-18  Score=160.36  Aligned_cols=84  Identities=35%  Similarity=0.524  Sum_probs=75.7

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      ..+..|.+...+|+||||++|++|.+++.. ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|
T Consensus        66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~d  144 (277)
T cd06642          66 RYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLAD  144 (277)
T ss_pred             hhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEcc
Confidence            334456778889999999999999998864 5689999999999999999999999999999999999999999999999


Q ss_pred             cCccc
Q psy17600         87 FGLCT   91 (351)
Q Consensus        87 FGla~   91 (351)
                      ||++.
T Consensus       145 fg~~~  149 (277)
T cd06642         145 FGVAG  149 (277)
T ss_pred             ccccc
Confidence            99864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.76  E-value=4.2e-18  Score=156.10  Aligned_cols=79  Identities=19%  Similarity=0.358  Sum_probs=70.3

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ......|+||||+.+|+|.+++.+. ..++......++.|++.|+.|||+.+++||||||+||+++.++.+||+|||++.
T Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~  146 (262)
T cd05058          67 PSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLAR  146 (262)
T ss_pred             cCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccc
Confidence            3455689999999999999999764 345677778888999999999999999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.76  E-value=3.2e-17  Score=148.86  Aligned_cols=165  Identities=43%  Similarity=0.734  Sum_probs=128.2

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      ..+++...+|+||||+++++|.+++.....+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.++.++|+|||+
T Consensus        60 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~  139 (250)
T cd05123          60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGL  139 (250)
T ss_pred             HHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCc
Confidence            45778889999999999999999998877899999999999999999999999999999999999999999999999999


Q ss_pred             cccCcCCC-------cccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCC
Q psy17600         90 CTGLKKSH-------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVP  144 (351)
Q Consensus        90 a~~~~~~~-------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  144 (351)
                      +.......       .+..|..+.      .....|.            +..||...+..+.++.+..  ....+|..  
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~--  215 (250)
T cd05123         140 AKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEF--  215 (250)
T ss_pred             ceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCC--
Confidence            86543321       011111111      1111222            3679988888788888775  33445544  


Q ss_pred             CCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        145 ISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       145 ~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ++.+..++|.++ ..+|+.|..... .+++.   .||||
T Consensus       216 ~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~---~~~~f  250 (250)
T cd05123         216 LSPEARDLISGLLQKDPTKRLGSGG-AEEIK---AHPFF  250 (250)
T ss_pred             CCHHHHHHHHHHhcCCHhhCCCccc-HHHHH---hCCCC
Confidence            578999999994 579999998754 46666   88998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.76  E-value=6.5e-18  Score=155.65  Aligned_cols=87  Identities=32%  Similarity=0.494  Sum_probs=75.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTL--SEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l--~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~   80 (351)
                      .+..+..+.+...+|+||||++|++|.+++... ..+  ++..+..++.|++.|+.|||++||+||||||+||+++. ++
T Consensus        67 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~  146 (268)
T cd06624          67 IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG  146 (268)
T ss_pred             eeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC
Confidence            344445677788999999999999999999764 445  78888899999999999999999999999999999976 67


Q ss_pred             cEEEEecCccc
Q psy17600         81 HIKLSDFGLCT   91 (351)
Q Consensus        81 ~~kl~DFGla~   91 (351)
                      .++|+|||++.
T Consensus       147 ~~~l~dfg~~~  157 (268)
T cd06624         147 VVKISDFGTSK  157 (268)
T ss_pred             eEEEecchhhe
Confidence            99999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.76  E-value=2e-17  Score=153.73  Aligned_cols=172  Identities=24%  Similarity=0.347  Sum_probs=127.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ..+..+..|.+....|+||||+++|+|..++.+ ...+++..+..++.|++.||.|||+.|++||||||+||+++.++.+
T Consensus        63 ~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~  142 (282)
T cd06643          63 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDI  142 (282)
T ss_pred             CeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCE
Confidence            344555667888899999999999999988764 4568999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHc
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMS  132 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~  132 (351)
                      +|+|||++.......       .+..|..+.           +....|.            +.+||...++.+...++..
T Consensus       143 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  222 (282)
T cd06643         143 KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK  222 (282)
T ss_pred             EEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh
Confidence            999999986432211       111122211           1112333            2589988888777766654


Q ss_pred             CCC-ceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        133 WRD-TLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       133 ~~~-~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ... .+..|  ..++.+++++|.+++ .+|..|..    .+++.   .||||+.
T Consensus       223 ~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~----~~~il---~~~~~~~  267 (282)
T cd06643         223 SEPPTLAQP--SRWSSEFKDFLKKCLEKNVDARWT----TTQLL---QHPFVTV  267 (282)
T ss_pred             cCCCCCCCc--cccCHHHHHHHHHHccCChhhCcC----HHHHh---cCCCEec
Confidence            321 22223  236889999999955 79999987    45666   8899875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.76  E-value=9.2e-18  Score=156.09  Aligned_cols=169  Identities=20%  Similarity=0.317  Sum_probs=121.5

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..|.....+|+||||++|++|..++...   ..+++..+..++.|++.|+.|||. .+|+||||||+||+++.++.++
T Consensus        64 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~  143 (286)
T cd06622          64 FYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVK  143 (286)
T ss_pred             hhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEE
Confidence            344577888999999999999999988763   378999999999999999999997 5999999999999999999999


Q ss_pred             EEecCccccCcCCCc-----ccccccCC------------CCCCccc------------CCCCCCCCCHHHHHHHHHcC-
Q psy17600         84 LSDFGLCTGLKKSHR-----TDFYRDLS------------QAKPSDF------------SYPPFCSENPQETYRKVMSW-  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~-----~~~~~~~~------------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~-  133 (351)
                      |+|||++........     +..|..+.            +....|.            +..||...+....+..+... 
T Consensus       144 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  223 (286)
T cd06622         144 LCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIV  223 (286)
T ss_pred             EeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHh
Confidence            999999865432111     11121111            1122332            25788776665555433221 


Q ss_pred             -CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        134 -RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       134 -~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                       ......|..  ++++++++|.+ +..+|+.|..    .+++.   .||||...
T Consensus       224 ~~~~~~~~~~--~~~~~~~li~~~l~~~p~~Rp~----~~~l~---~~~~~~~~  268 (286)
T cd06622         224 DGDPPTLPSG--YSDDAQDFVAKCLNKIPNRRPT----YAQLL---EHPWLVKY  268 (286)
T ss_pred             hcCCCCCCcc--cCHHHHHHHHHHcccCcccCCC----HHHHh---cChhhhhc
Confidence             112233332  78999999999 4579999976    45666   88998743

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=3.7e-17  Score=151.53  Aligned_cols=176  Identities=21%  Similarity=0.295  Sum_probs=130.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ..+..+..+.+...+|+||||+++|+|..++.+. ..+++..++.++.|++.|+.|||++||+|+||||+||+++.++.+
T Consensus        63 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~  142 (280)
T cd06611          63 NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDV  142 (280)
T ss_pred             ceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCE
Confidence            3455566788889999999999999999998764 468999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHc
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMS  132 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~  132 (351)
                      +|+|||++.......       .+..|..+.           .....|.            +.+||...+......++..
T Consensus       143 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  222 (280)
T cd06611         143 KLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK  222 (280)
T ss_pred             EEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc
Confidence            999999876432211       111121111           1112332            3689988888777777765


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        133 WRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      ... ..+......+.++.++|.+ +..+|.+|..    .+++.   .||||.....
T Consensus       223 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il---~~~~~~~~~~  270 (280)
T cd06611         223 SEP-PTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELL---KHPFVSDQSD  270 (280)
T ss_pred             CCC-CCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHh---cChhhcccch
Confidence            321 1222222468899999999 5579999976    45666   8899987643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.76  E-value=3e-18  Score=164.98  Aligned_cols=73  Identities=29%  Similarity=0.632  Sum_probs=66.4

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+. ++|...+...  +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence            46899999996 5888877643  8899999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=6.5e-18  Score=156.27  Aligned_cols=86  Identities=35%  Similarity=0.575  Sum_probs=77.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+....|+||||++|++|.+++.. +.+++..+..++.|++.|+.|+|+.|++|+||+|+||+++.++.++|
T Consensus        64 vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l  142 (277)
T cd06917          64 ITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKL  142 (277)
T ss_pred             eeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEE
Confidence            34455567788899999999999999998865 47899999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       143 ~dfg~~~  149 (277)
T cd06917         143 CDFGVAA  149 (277)
T ss_pred             ccCCcee
Confidence            9999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.75  E-value=5.8e-18  Score=154.14  Aligned_cols=87  Identities=28%  Similarity=0.425  Sum_probs=78.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+....|++|||+++++|.+++.....  +++..+..++.|++.|+.+||+.+++|+||||+||+++.++.++
T Consensus        64 ~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~  143 (258)
T smart00219       64 VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVK  143 (258)
T ss_pred             heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEE
Confidence            4455567778899999999999999999976544  89999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       144 l~dfg~~~~  152 (258)
T smart00219      144 ISDFGLSRD  152 (258)
T ss_pred             EcccCCcee
Confidence            999999753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.75  E-value=5e-18  Score=158.50  Aligned_cols=87  Identities=22%  Similarity=0.319  Sum_probs=76.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHH
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK------------------------DTLSEECTQFYIAETALAIDSIH   60 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~------------------------~~l~e~~~~~~~~qi~~al~~lH   60 (351)
                      ++..+..++.....|+||||+.+|+|.+++...                        ..+++..+..++.|++.||.|||
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH  144 (290)
T cd05045          65 VIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA  144 (290)
T ss_pred             EeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH
Confidence            344555677888899999999999999988642                        23678888999999999999999


Q ss_pred             HCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         61 KLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        61 ~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +++++||||||+||+++.++.+||+|||++.
T Consensus       145 ~~~ivH~dikp~nill~~~~~~kl~dfg~~~  175 (290)
T cd05045         145 EMKLVHRDLAARNVLVAEGRKMKISDFGLSR  175 (290)
T ss_pred             HCCeehhhhhhheEEEcCCCcEEeccccccc
Confidence            9999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.75  E-value=5.5e-18  Score=157.29  Aligned_cols=85  Identities=31%  Similarity=0.475  Sum_probs=76.1

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      ....+.+...+|+||||++++.+..+..+...+++..+..++.|++.|+.|||.++++|+||+|+||+++.++.+||+||
T Consensus        65 ~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~  144 (288)
T cd07833          65 LKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDF  144 (288)
T ss_pred             hhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEee
Confidence            34456778889999999999888777766677999999999999999999999999999999999999999999999999


Q ss_pred             Ccccc
Q psy17600         88 GLCTG   92 (351)
Q Consensus        88 Gla~~   92 (351)
                      |++..
T Consensus       145 g~~~~  149 (288)
T cd07833         145 GFARA  149 (288)
T ss_pred             ecccc
Confidence            99743

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.75  E-value=3.6e-18  Score=159.18  Aligned_cols=86  Identities=22%  Similarity=0.320  Sum_probs=75.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------------CCCHHHHHHHHHHHHHHHHHHHHCC
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------------TLSEECTQFYIAETALAIDSIHKLG   63 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------------~l~e~~~~~~~~qi~~al~~lH~~~   63 (351)
                      +..+..+++...+|+||||+++|+|.+++....                      .+++..+..++.|++.||.|+|.++
T Consensus        71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~  150 (288)
T cd05050          71 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK  150 (288)
T ss_pred             heEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            344456778889999999999999999997432                      3677888899999999999999999


Q ss_pred             CeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         64 FIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        64 iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ++||||||+||+++.++.++|+|||++.
T Consensus       151 i~H~dl~p~nil~~~~~~~~l~dfg~~~  178 (288)
T cd05050         151 FVHRDLATRNCLVGENMVVKIADFGLSR  178 (288)
T ss_pred             eecccccHhheEecCCCceEECccccce
Confidence            9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.75  E-value=7.9e-18  Score=156.14  Aligned_cols=81  Identities=21%  Similarity=0.419  Sum_probs=73.5

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      .+.+ ...|+||||+++|+|.+++.+. ..+++..+..++.|++.|+.|||+++++||||||+||+++.++.+||+|||+
T Consensus        77 ~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~  155 (279)
T cd05057          77 ICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGL  155 (279)
T ss_pred             EEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcc
Confidence            3444 7899999999999999999764 4689999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      ++.
T Consensus       156 ~~~  158 (279)
T cd05057         156 AKL  158 (279)
T ss_pred             ccc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.75  E-value=4.4e-17  Score=150.31  Aligned_cols=170  Identities=25%  Similarity=0.366  Sum_probs=124.9

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +..+..+.+...+|+||||++||+|.+++.+.+.+++..++.++.|++.||.|+|+++++|+||+|+||+++.++.++++
T Consensus        71 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~  150 (272)
T cd06629          71 VQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKIS  150 (272)
T ss_pred             ceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEe
Confidence            34445667788999999999999999999888889999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCcCCC---------cccccccCC--------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         86 DFGLCTGLKKSH---------RTDFYRDLS--------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        86 DFGla~~~~~~~---------~~~~~~~~~--------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      |||++.......         .+..|..+.        .....|.            +..||...+.......+......
T Consensus       151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  230 (272)
T cd06629         151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA  230 (272)
T ss_pred             eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence            999987543211         111111111        1222333            25788766655544444433333


Q ss_pred             eeCCCCC--CCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        137 LVFPPEV--PISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       137 ~~~p~~~--~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ..+|...  .++.+++++|.++ ..+|+.|..    .+++.   .||||
T Consensus       231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il---~~~~~  272 (272)
T cd06629         231 PPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELL---QHPFI  272 (272)
T ss_pred             CcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHh---hCCCC
Confidence            3444432  4688999999995 479999976    56777   88986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.75  E-value=3.2e-17  Score=150.69  Aligned_cols=168  Identities=26%  Similarity=0.399  Sum_probs=124.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+....|+||||+++++|.+++.+.+.+++..+..++.|++.|++|||++|++||||+|+||+++.++.++|
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l  147 (267)
T cd06628          68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKI  147 (267)
T ss_pred             eeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEe
Confidence            34445567788899999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc-------------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         85 SDFGLCTGLKKSHR-------------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        85 ~DFGla~~~~~~~~-------------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      +|||+++.......             +..|..+      ......|.            +..||...+......++...
T Consensus       148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  227 (267)
T cd06628         148 SDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN  227 (267)
T ss_pred             cccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc
Confidence            99999876542110             0011111      11122332            25788877666555555442


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                       .....|.  .++.++.++|.+++ .+|.+|..    +.++.   .||||
T Consensus       228 -~~~~~~~--~~~~~~~~li~~~l~~~p~~Rp~----~~~il---~~~~~  267 (267)
T cd06628         228 -ASPEIPS--NISSEAIDFLEKTFEIDHNKRPT----AAELL---KHPFL  267 (267)
T ss_pred             -CCCcCCc--ccCHHHHHHHHHHccCCchhCcC----HHHHh---hCCCC
Confidence             1222333  36789999999954 69999976    56776   78887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0665|consensus

Probab=99.75  E-value=5.9e-19  Score=161.85  Aligned_cols=73  Identities=29%  Similarity=0.646  Sum_probs=65.6

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .++|+||||+. ++|...+.  ..++.+...++..|+++|++|+|+.||+||||||+||++..++.+||.|||++.
T Consensus        94 ~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar  166 (369)
T KOG0665|consen   94 QEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLAR  166 (369)
T ss_pred             HhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhc
Confidence            35799999996 57777665  457888899999999999999999999999999999999999999999999974

>KOG0194|consensus

Probab=99.75  E-value=2.6e-18  Score=168.76  Aligned_cols=87  Identities=29%  Similarity=0.373  Sum_probs=79.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+.+|...-+..-+|+|||+|.||+|.++|++.+ .++..+...++.+.+.||+|||++++|||||-.+|+|++.++.+|
T Consensus       223 VVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vK  302 (474)
T KOG0194|consen  223 VVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVK  302 (474)
T ss_pred             EEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEE
Confidence            4556666667788999999999999999999876 599999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||+++
T Consensus       303 ISDFGLs~  310 (474)
T KOG0194|consen  303 ISDFGLSR  310 (474)
T ss_pred             eCcccccc
Confidence            99999974

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.75  E-value=7.4e-18  Score=153.61  Aligned_cols=84  Identities=29%  Similarity=0.570  Sum_probs=73.9

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cEEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HIKL   84 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~kl   84 (351)
                      .+..|.....+|+||||++|++|.+++.+.  ..+++..+..++.+++.|+.|+|++|++|+||+|+||+++.++ .++|
T Consensus        64 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l  143 (256)
T cd08220          64 YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKI  143 (256)
T ss_pred             eeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEE
Confidence            344577788999999999999999999763  3588999999999999999999999999999999999998654 5799


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       144 ~d~~~~~  150 (256)
T cd08220         144 GDFGISK  150 (256)
T ss_pred             ccCCCce
Confidence            9999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.75  E-value=6.6e-18  Score=154.71  Aligned_cols=88  Identities=22%  Similarity=0.337  Sum_probs=78.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+..+..+.+...+|+||||+++++|.+++....  .++...+..++.|++.|+.|||+++++|+||||+||+++.++.+
T Consensus        63 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~  142 (261)
T cd05034          63 LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVC  142 (261)
T ss_pred             EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCE
Confidence            3444556777788999999999999999997643  68899999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      +|+|||++..
T Consensus       143 ~l~d~g~~~~  152 (261)
T cd05034         143 KIADFGLARL  152 (261)
T ss_pred             EECcccccee
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.75  E-value=6.2e-18  Score=162.31  Aligned_cols=52  Identities=31%  Similarity=0.469  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         40 LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        40 l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ++...+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~  227 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLAR  227 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccc
Confidence            5667778899999999999999999999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.75  E-value=4e-17  Score=150.33  Aligned_cols=160  Identities=28%  Similarity=0.424  Sum_probs=120.0

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ...+|++|||+++++|.+++.+...+++.....++.|++.||.|||+++|+||||||+||+++.++.++|+|||++..+.
T Consensus        78 ~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~  157 (266)
T cd06651          78 EKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  157 (266)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence            36789999999999999999887789999999999999999999999999999999999999999999999999987543


Q ss_pred             CCC----------cccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCC
Q psy17600         95 KSH----------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPIS  146 (351)
Q Consensus        95 ~~~----------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s  146 (351)
                      ...          .+..|..+.      .....|.            +.+||...+.......+........+|.  .++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~  235 (266)
T cd06651         158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPS--HIS  235 (266)
T ss_pred             cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCch--hcC
Confidence            211          011111111      1112232            2689987766665555554333344443  267


Q ss_pred             HHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        147 EEARETIVRFCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       147 ~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      +..+++|..++.+|++|.+    ++++.   .||||+
T Consensus       236 ~~~~~li~~~~~~p~~Rp~----~~eil---~hp~~~  265 (266)
T cd06651         236 EHARDFLGCIFVEARHRPS----AEELL---RHPFAQ  265 (266)
T ss_pred             HHHHHHHHHhcCChhhCcC----HHHHh---cCcccc
Confidence            8999999777789999975    56776   889986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.75  E-value=1.2e-17  Score=153.40  Aligned_cols=84  Identities=25%  Similarity=0.415  Sum_probs=73.6

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ..+..+.+ ...|++|||+++|+|.+++.+.  ..++...+..++.|++.||.|+|+.|++||||||+||+++.++.+||
T Consensus        65 ~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l  143 (260)
T cd05073          65 KLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI  143 (260)
T ss_pred             eEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEE
Confidence            33444555 7789999999999999999763  35678888889999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       144 ~d~~~~~  150 (260)
T cd05073         144 ADFGLAR  150 (260)
T ss_pred             CCCccee
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.75  E-value=9.5e-18  Score=155.47  Aligned_cols=87  Identities=25%  Similarity=0.426  Sum_probs=75.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~   78 (351)
                      ..+..+..+.+...+|+||||++ |+|.+++..    ...+++..+..++.|++.|+.|||++ +++||||||+||+++.
T Consensus        61 ~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~  139 (283)
T cd06617          61 YTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR  139 (283)
T ss_pred             CeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence            34555666778889999999997 678777653    24689999999999999999999997 9999999999999999


Q ss_pred             CCcEEEEecCccc
Q psy17600         79 RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ~~~~kl~DFGla~   91 (351)
                      ++.+||+|||++.
T Consensus       140 ~~~~kl~dfg~~~  152 (283)
T cd06617         140 NGQVKLCDFGISG  152 (283)
T ss_pred             CCCEEEeeccccc
Confidence            9999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.75  E-value=1.1e-17  Score=154.39  Aligned_cols=77  Identities=27%  Similarity=0.504  Sum_probs=70.9

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ....|+||||+++|+|.+++.+.. .+++..+..++.|++.||.|+|+.+++|+||||+||+++.++.++|+|||+++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~  155 (270)
T cd05056          78 ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSR  155 (270)
T ss_pred             CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceee
Confidence            456899999999999999997643 58999999999999999999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.75  E-value=6e-18  Score=159.28  Aligned_cols=77  Identities=19%  Similarity=0.443  Sum_probs=70.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...++++||+++|+|.+++.... .+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.
T Consensus        81 ~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~  158 (303)
T cd05110          81 PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (303)
T ss_pred             CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccc
Confidence            45789999999999999987643 588999999999999999999999999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.75  E-value=3.9e-18  Score=181.06  Aligned_cols=78  Identities=9%  Similarity=0.198  Sum_probs=69.8

Q ss_pred             CCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ...++++|||+ +++|.++|.. ...+++..++.++.||+.||.|||++|||||||||+|||++..|.+|++|||+|...
T Consensus        52 ~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         52 DDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             cchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            34688889987 6799999975 346899999999999999999999999999999999999999999999999998643

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.75  E-value=9.8e-18  Score=153.24  Aligned_cols=77  Identities=26%  Similarity=0.497  Sum_probs=70.2

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ...+|+||||+++|+|.+++....  .+++.....++.|++.|+.|+|++|++||||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~  148 (254)
T cd05083          70 HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLAR  148 (254)
T ss_pred             CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccce
Confidence            456899999999999999997643  47888889999999999999999999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.75  E-value=5.4e-17  Score=149.25  Aligned_cols=168  Identities=27%  Similarity=0.433  Sum_probs=121.9

Q ss_pred             eeeEEEecC--CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          7 LKQLRMSDP--INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         7 ~~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ..+..+++.  ..+|+||||++||+|.+++.+...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|
T Consensus        68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l  147 (265)
T cd06652          68 QYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKL  147 (265)
T ss_pred             eEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEE
Confidence            334445553  568999999999999999988778899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC----------cccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         85 SDFGLCTGLKKSH----------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        85 ~DFGla~~~~~~~----------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      +|||++.......          .+..|..+.      .....|.            +.+||...+.......+......
T Consensus       148 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  227 (265)
T cd06652         148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN  227 (265)
T ss_pred             CcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC
Confidence            9999987542110          111121111      1122332            25888877666655555432222


Q ss_pred             eeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        137 LVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      ...|.  .++..+.++|.+++.+|.+|.+    .+++.   .|||++
T Consensus       228 ~~~~~--~~~~~~~~~i~~~l~~p~~Rp~----~~~il---~~~~~~  265 (265)
T cd06652         228 PVLPP--HVSDHCRDFLKRIFVEAKLRPS----ADELL---RHTFVH  265 (265)
T ss_pred             CCCch--hhCHHHHHHHHHHhcChhhCCC----HHHHh---cCcccC
Confidence            22333  3678899999997778988886    56777   889874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.74  E-value=1.2e-17  Score=153.27  Aligned_cols=82  Identities=24%  Similarity=0.418  Sum_probs=73.1

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      ..+.....+|+||||+++|+|.+++...  ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+||
T Consensus        67 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~df  146 (260)
T cd05067          67 YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADF  146 (260)
T ss_pred             EEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccC
Confidence            3444567799999999999999998653  35788889999999999999999999999999999999999999999999


Q ss_pred             Cccc
Q psy17600         88 GLCT   91 (351)
Q Consensus        88 Gla~   91 (351)
                      |++.
T Consensus       147 g~~~  150 (260)
T cd05067         147 GLAR  150 (260)
T ss_pred             ccee
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.74  E-value=1.1e-17  Score=152.72  Aligned_cols=86  Identities=21%  Similarity=0.304  Sum_probs=77.1

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+....|+||||+++|+|.+++... +.++++.+..++.|++.|+.|||+++++|+||||+||+++.++.++|
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l  141 (256)
T cd05112          62 VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKV  141 (256)
T ss_pred             eeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEE
Confidence            34455678888999999999999999998754 46889999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       142 ~d~g~~~  148 (256)
T cd05112         142 SDFGMTR  148 (256)
T ss_pred             CCCccee
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.74  E-value=7.6e-18  Score=158.05  Aligned_cols=85  Identities=34%  Similarity=0.563  Sum_probs=76.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +..+..|.+.+..|+||||+++++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||+|+||+++.++.++|+
T Consensus        80 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~  158 (292)
T cd06657          80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLS  158 (292)
T ss_pred             hheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEc
Confidence            3445567888999999999999999987754 568999999999999999999999999999999999999999999999


Q ss_pred             ecCccc
Q psy17600         86 DFGLCT   91 (351)
Q Consensus        86 DFGla~   91 (351)
                      |||++.
T Consensus       159 dfg~~~  164 (292)
T cd06657         159 DFGFCA  164 (292)
T ss_pred             ccccce
Confidence            999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG1152|consensus

Probab=99.74  E-value=1.7e-18  Score=169.08  Aligned_cols=88  Identities=27%  Similarity=0.422  Sum_probs=79.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecC-CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFL-PGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~-~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .++.+.--|+|.+++||+||-- +|-||+++|..+..++|.+++.++.|++.|+++||++||||||||-||+.++.+|.+
T Consensus       630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~  709 (772)
T KOG1152|consen  630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFV  709 (772)
T ss_pred             chhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeE
Confidence            3444445599999999999975 567999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||.+.
T Consensus       710 klidfgsaa  718 (772)
T KOG1152|consen  710 KLIDFGSAA  718 (772)
T ss_pred             EEeeccchh
Confidence            999999864

>KOG1989|consensus

Probab=99.74  E-value=4.2e-18  Score=173.54  Aligned_cols=146  Identities=28%  Similarity=0.416  Sum_probs=114.7

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..++|.||||.||.|.+++..+  ..|.|.++..++.+++.|+.+||...  |||||||.|||||+.+|+.||||||-+.
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            4578999999999999999743  45999999999999999999999988  9999999999999999999999999886


Q ss_pred             cCcCCC----------------ccccc---------ccCCCCCCcccC------------CCCCCCCCHHHHHHHHHcCC
Q psy17600         92 GLKKSH----------------RTDFY---------RDLSQAKPSDFS------------YPPFCSENPQETYRKVMSWR  134 (351)
Q Consensus        92 ~~~~~~----------------~~~~~---------~~~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~  134 (351)
                      ..-...                .|..|         +..+-....|.|            ..||......++    +  .
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI----l--n  268 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI----L--N  268 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE----E--e
Confidence            432211                12222         223333334443            589987654433    3  3


Q ss_pred             CceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC
Q psy17600        135 DTLVFPPEVPISEEARETIVR-FCSECDRRLGSA  167 (351)
Q Consensus       135 ~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~  167 (351)
                      +.+.||+..+.|...++||+. |..+|.+|....
T Consensus       269 g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~  302 (738)
T KOG1989|consen  269 GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIY  302 (738)
T ss_pred             ccccCCCCccHHHHHHHHHHHHhccCcccCCCHH
Confidence            678899998899999999999 557999999864

>KOG0669|consensus

Probab=99.74  E-value=3.2e-18  Score=152.64  Aligned_cols=78  Identities=28%  Similarity=0.480  Sum_probs=70.5

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ...+|+||++|+ .||..+|.+. ..++...++.++.+++.||.|+|++.|+|||+|++|+||+.+|.+||+|||+++.+
T Consensus        96 r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen   96 RATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             cceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence            345899999997 5999988765 57899999999999999999999999999999999999999999999999998643

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.74  E-value=5.3e-17  Score=152.50  Aligned_cols=174  Identities=21%  Similarity=0.383  Sum_probs=124.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+.+...+|+||||+. ++|..++.+. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++
T Consensus        66 I~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k  144 (301)
T cd07873          66 IVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELK  144 (301)
T ss_pred             cceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEE
Confidence            4555667888899999999997 5898888653 4688999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCC--
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRD--  135 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~--  135 (351)
                      |+|||++........       +..|..+.       +....|.            +.+||.+.+..+....+.....  
T Consensus       145 l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~  224 (301)
T cd07873         145 LADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTP  224 (301)
T ss_pred             ECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence            999999865332111       11122111       1111222            3689988877665544332110  


Q ss_pred             ---------------ceeCCCC---------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCC
Q psy17600        136 ---------------TLVFPPE---------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVD  186 (351)
Q Consensus       136 ---------------~~~~p~~---------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~id  186 (351)
                                     ...+|..         ..++++++++|.++ ..+|.+|..    ++++.   .||||+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil---~h~~f~~~~  293 (301)
T cd07873         225 TEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAM---KHPYFHCLG  293 (301)
T ss_pred             ChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHh---cCccccccc
Confidence                           1112211         23688999999995 469999996    45666   899998654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.74  E-value=1.1e-17  Score=156.80  Aligned_cols=85  Identities=32%  Similarity=0.524  Sum_probs=76.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +..+..|++....|+|+||+++|+|.+++.+ ..+++..+..++.|++.|+.|||++|++||||||+||+++.++.++|+
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~  157 (293)
T cd06647          79 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT  157 (293)
T ss_pred             eehhheeeeCCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEc
Confidence            3444567788899999999999999999865 458888999999999999999999999999999999999999999999


Q ss_pred             ecCccc
Q psy17600         86 DFGLCT   91 (351)
Q Consensus        86 DFGla~   91 (351)
                      |||++.
T Consensus       158 dfg~~~  163 (293)
T cd06647         158 DFGFCA  163 (293)
T ss_pred             cCccee
Confidence            999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.74  E-value=1.5e-17  Score=154.15  Aligned_cols=87  Identities=34%  Similarity=0.526  Sum_probs=79.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|.+...+|+||||+++|+|..++.+ ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++
T Consensus        63 ~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~  141 (277)
T cd06641          63 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK  141 (277)
T ss_pred             CEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEE
Confidence            455666678888999999999999999998864 5689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       142 l~dfg~~~  149 (277)
T cd06641         142 LADFGVAG  149 (277)
T ss_pred             Eeecccce
Confidence            99999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.74  E-value=3e-17  Score=150.19  Aligned_cols=165  Identities=32%  Similarity=0.575  Sum_probs=122.1

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      +..|++...+|+||||+.|++|..++.+...+++..+..++.|++.||.|||.++++|+||+|+||+++.++.++|+|||
T Consensus        66 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~  145 (258)
T cd05578          66 WYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFN  145 (258)
T ss_pred             HHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecc
Confidence            34567888999999999999999999877789999999999999999999999999999999999999999999999999


Q ss_pred             ccccCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCH---HHHHHHHHcCCCceeCCC
Q psy17600         89 LCTGLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENP---QETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        89 la~~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~---~~~~~~i~~~~~~~~~p~  141 (351)
                      ++........      +..|..      .......|.            +..||...+.   ......+..  ....+|.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~  223 (258)
T cd05578         146 IATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPA  223 (258)
T ss_pred             cccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcc
Confidence            9865432210      111111      111222332            2578887663   333333322  3334454


Q ss_pred             CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        142 EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       142 ~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      .  ++.++.++|.+ +..+|.+|.+..  ..++.   .||||
T Consensus       224 ~--~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~---~~~~~  258 (258)
T cd05578         224 T--WSTEAIDAINKLLERDPQKRLGDN--LKDLK---NHPYF  258 (258)
T ss_pred             c--CcHHHHHHHHHHccCChhHcCCcc--HHHHh---cCCCC
Confidence            3  67899999999 557999998864  45666   88997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.74  E-value=4.2e-17  Score=150.39  Aligned_cols=166  Identities=37%  Similarity=0.700  Sum_probs=128.6

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      ..|.+...+|+||||+.+++|.+++.+.+.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++++|||+
T Consensus        69 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~  148 (280)
T cd05581          69 YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGT  148 (280)
T ss_pred             HHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCcc
Confidence            34677889999999999999999999888899999999999999999999999999999999999999999999999999


Q ss_pred             cccCcCCCcc----------------------cccccCCC-----------CCCccc------------CCCCCCCCCHH
Q psy17600         90 CTGLKKSHRT----------------------DFYRDLSQ-----------AKPSDF------------SYPPFCSENPQ  124 (351)
Q Consensus        90 a~~~~~~~~~----------------------~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~  124 (351)
                      +.........                      .......+           ....|.            +.+||...+..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  228 (280)
T cd05581         149 AKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY  228 (280)
T ss_pred             ccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence            8754322110                      00001111           111221            26889888877


Q ss_pred             HHHHHHHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        125 ETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       125 ~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ..++.+..  ....+|..  +++...++|.++ ..+|++|.....+.+++.   .||||
T Consensus       229 ~~~~~~~~--~~~~~~~~--~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll---~~~~~  280 (280)
T cd05581         229 LTFQKILK--LEYSFPPN--FPPDAKDLIEKLLVLDPQDRLGVNEGYDELK---AHPFF  280 (280)
T ss_pred             HHHHHHHh--cCCCCCCc--cCHHHHHHHHHHhcCCHhhCCCcccCHHHHh---cCCCC
Confidence            77777764  33445543  688999999995 479999998766667887   88997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0606|consensus

Probab=99.73  E-value=3.1e-18  Score=177.00  Aligned_cols=171  Identities=38%  Similarity=0.605  Sum_probs=138.7

Q ss_pred             CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcCC-----------
Q psy17600         28 GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS-----------   96 (351)
Q Consensus        28 g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~~-----------   96 (351)
                      ||-...+...+.++..        ++.|++|+|+.||+|||+||+|++|..-|++|++|||+++...-.           
T Consensus       136 gDc~tllk~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~  207 (1205)
T KOG0606|consen  136 GDCATLLKNIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIE  207 (1205)
T ss_pred             chhhhhcccCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchH
Confidence            5555555554555443        368999999999999999999999999999999999997632111           


Q ss_pred             -----------Cccccc------ccCCCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCceeCCCCC-CCC
Q psy17600         97 -----------HRTDFY------RDLSQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLVFPPEV-PIS  146 (351)
Q Consensus        97 -----------~~~~~~------~~~~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~-~~s  146 (351)
                                 ..+..|      ...+|++++|||            ..||.++++++++..+++  +.+.+|... +..
T Consensus       208 k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis--d~i~wpE~dea~p  285 (1205)
T KOG0606|consen  208 KDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS--DDIEWPEEDEALP  285 (1205)
T ss_pred             HHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh--hhccccccCcCCC
Confidence                       112222      234688999997            589999999999999987  678888774 467


Q ss_pred             HHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCCCC
Q psy17600        147 EEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       147 ~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f~~  212 (351)
                      +|++|+|.+|+ .+|..|+|-. |+-+++   .|+||+++||..|..+++.+.+.+.+++|++.||.
T Consensus       286 ~Ea~dli~~LL~qnp~~Rlgt~-ga~evk---~h~ff~~LDw~~llRqkaefvpql~~eddtsyfdT  348 (1205)
T KOG0606|consen  286 PEAQDLIEQLLRQNPLCRLGTG-GALEVK---QHGFFQLLDWKSLLRQKAEFVPQLESEDDTSYFDT  348 (1205)
T ss_pred             HHHHHHHHHHHHhChHhhcccc-hhhhhh---hccceeecccchhhhhhccccccccccccchhhcc
Confidence            89999999966 6899999976 667777   88999999999999999999999999999999984

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.73  E-value=1.5e-17  Score=158.47  Aligned_cols=87  Identities=22%  Similarity=0.333  Sum_probs=78.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++..+..|++...+|+||||+.+|+|.+++.+.  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.
T Consensus        60 niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~  139 (328)
T cd08226          60 NIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGL  139 (328)
T ss_pred             CcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCc
Confidence            3456677889999999999999999999998764  35889999999999999999999999999999999999999999


Q ss_pred             EEEEecCcc
Q psy17600         82 IKLSDFGLC   90 (351)
Q Consensus        82 ~kl~DFGla   90 (351)
                      ++++||+.+
T Consensus       140 ~~~~~~~~~  148 (328)
T cd08226         140 VSLSGLSHL  148 (328)
T ss_pred             EEEechHHH
Confidence            999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.73  E-value=6.2e-18  Score=156.97  Aligned_cols=83  Identities=31%  Similarity=0.487  Sum_probs=75.9

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      +..|.+...+|+||||+.++.|..+......+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||
T Consensus        66 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg  145 (286)
T cd07846          66 IEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFG  145 (286)
T ss_pred             HHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeee
Confidence            34567788899999999999998887766679999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      ++.
T Consensus       146 ~~~  148 (286)
T cd07846         146 FAR  148 (286)
T ss_pred             eee
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.73  E-value=1.1e-17  Score=157.48  Aligned_cols=86  Identities=20%  Similarity=0.362  Sum_probs=73.0

Q ss_pred             EeeeEEEecC--CcEEEEEecCCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          6 CLKQLRMSDP--INLYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         6 ~~~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      +..+..+++.  ..+|+||||+.+ +|.+.+...     ..+++..+..++.|++.|+.|||+++|+||||||+||+++.
T Consensus        65 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~  143 (316)
T cd07842          65 VSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMG  143 (316)
T ss_pred             cceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcC
Confidence            4455567777  789999999975 677766422     36889999999999999999999999999999999999999


Q ss_pred             ----CCcEEEEecCcccc
Q psy17600         79 ----RGHIKLSDFGLCTG   92 (351)
Q Consensus        79 ----~~~~kl~DFGla~~   92 (351)
                          ++.+||+|||++..
T Consensus       144 ~~~~~~~~kl~Dfg~~~~  161 (316)
T cd07842         144 EGPERGVVKIGDLGLARL  161 (316)
T ss_pred             CCCccceEEECCCccccc
Confidence                89999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.1e-16  Score=147.98  Aligned_cols=174  Identities=25%  Similarity=0.385  Sum_probs=128.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ..+..+..|.+...+|+|+||+++++|.+++... .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++
T Consensus        60 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~  138 (274)
T cd06609          60 YITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVK  138 (274)
T ss_pred             CeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence            3445556778889999999999999999998764 789999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------ccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++.+.....       +..|..+.      .....|.            +.+||...++......+.... ...
T Consensus       139 l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~  217 (274)
T cd06609         139 LADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN-PPS  217 (274)
T ss_pred             EcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-CCC
Confidence            999999876543211       11122111      1122232            268998877766665555421 122


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      .+. ..++++..++|.+ +..+|++|.+    ++++.   .||||.+..-
T Consensus       218 ~~~-~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il---~~~~~~~~~~  259 (274)
T cd06609         218 LEG-NKFSKPFKDFVSLCLNKDPKERPS----AKELL---KHKFIKKAKK  259 (274)
T ss_pred             Ccc-cccCHHHHHHHHHHhhCChhhCcC----HHHHh---hChhhcCCCc
Confidence            222 1267899999999 5579999975    55666   8899986543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.73  E-value=1.5e-16  Score=145.75  Aligned_cols=170  Identities=22%  Similarity=0.350  Sum_probs=126.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+..+..+.+....|+||||++|++|.+++...   ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.
T Consensus        61 i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~  140 (267)
T cd06610          61 VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGS  140 (267)
T ss_pred             EEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC
Confidence            344555688889999999999999999999764   45899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCcc-----------cccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHH
Q psy17600         82 IKLSDFGLCTGLKKSHRT-----------DFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVM  131 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~-----------~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~  131 (351)
                      ++|+|||++.........           ..|..+       ......|.            +..||...+..+.+.++.
T Consensus       141 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~  220 (267)
T cd06610         141 VKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL  220 (267)
T ss_pred             EEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh
Confidence            999999998654332111           112111       11122232            268998888777777666


Q ss_pred             cCCCceeCCCC---CCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        132 SWRDTLVFPPE---VPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       132 ~~~~~~~~p~~---~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ... ...++..   ..++++.++++.+ +..+|.+|..    ++++.   .||||
T Consensus       221 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll---~~p~~  267 (267)
T cd06610         221 QND-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELL---KHKFF  267 (267)
T ss_pred             cCC-CCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHh---hCCCC
Confidence            532 2222222   2468899999999 5579999975    56666   78997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.73  E-value=4.5e-17  Score=154.38  Aligned_cols=86  Identities=29%  Similarity=0.379  Sum_probs=74.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ..+..+..+.+....|+||||+.| +|.+.+.. ...+++..+..++.|++.|+.|||+++|+||||+|+||+++.++.+
T Consensus        86 ~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~  164 (317)
T cd06635          86 NSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQV  164 (317)
T ss_pred             CEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCE
Confidence            344555667788899999999975 77776653 4568999999999999999999999999999999999999999999


Q ss_pred             EEEecCcc
Q psy17600         83 KLSDFGLC   90 (351)
Q Consensus        83 kl~DFGla   90 (351)
                      +|+|||++
T Consensus       165 kl~dfg~~  172 (317)
T cd06635         165 KLADFGSA  172 (317)
T ss_pred             EEecCCCc
Confidence            99999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.73  E-value=4.4e-17  Score=153.57  Aligned_cols=86  Identities=28%  Similarity=0.353  Sum_probs=74.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+.....+.+....|+||||+. |+|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~k  155 (307)
T cd06607          77 TIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVK  155 (307)
T ss_pred             EEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEE
Confidence            3445556788889999999997 566666653 45689999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       156 L~dfg~~~  163 (307)
T cd06607         156 LADFGSAS  163 (307)
T ss_pred             EeecCcce
Confidence            99999863

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.73  E-value=1.3e-17  Score=159.16  Aligned_cols=78  Identities=28%  Similarity=0.660  Sum_probs=71.5

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+||||+. |+|.+++.....+++..+..++.|++.||.|||.++|+||||||+||+++.++.+||+|||++..
T Consensus        79 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          79 DFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             CCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence            3457899999995 68999998777899999999999999999999999999999999999999999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.72  E-value=1.7e-17  Score=158.25  Aligned_cols=78  Identities=32%  Similarity=0.580  Sum_probs=71.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ....+|++|||+. ++|...+.....+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++.
T Consensus        77 ~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~  154 (332)
T cd07857          77 NFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARG  154 (332)
T ss_pred             cCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence            3456899999986 68999998878899999999999999999999999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.72  E-value=2.6e-17  Score=152.62  Aligned_cols=82  Identities=22%  Similarity=0.372  Sum_probs=73.6

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKK--------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~--------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+.+....|+++||+++|+|..++...        ..+++..+..++.|++.||+|||+++++||||||+||+++.++.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~  156 (280)
T cd05043          77 CIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQV  156 (280)
T ss_pred             EecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcE
Confidence            345567899999999999999998653        357899999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       157 kl~d~g~~~~  166 (280)
T cd05043         157 KITDNALSRD  166 (280)
T ss_pred             EECCCCCccc
Confidence            9999999754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.72  E-value=4.7e-17  Score=150.82  Aligned_cols=86  Identities=29%  Similarity=0.460  Sum_probs=74.5

Q ss_pred             eEeeeEEEecCCc-----EEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec
Q psy17600          5 ACLKQLRMSDPIN-----LYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD   77 (351)
Q Consensus         5 ~~~~~~~f~~~~~-----lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~   77 (351)
                      .+.....+.+...     +|++|||+. ++|.+++.+..  .+++..+..++.|++.||.|||+.+++|+||+|+||+++
T Consensus        63 i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~  141 (287)
T cd07838          63 IVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT  141 (287)
T ss_pred             cceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc
Confidence            3445556666666     999999997 48988887643  589999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCccc
Q psy17600         78 ARGHIKLSDFGLCT   91 (351)
Q Consensus        78 ~~~~~kl~DFGla~   91 (351)
                      .++.++|+|||++.
T Consensus       142 ~~~~~~l~dfg~~~  155 (287)
T cd07838         142 SDGQVKIADFGLAR  155 (287)
T ss_pred             cCCCEEEeccCcce
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.72  E-value=1.4e-17  Score=159.05  Aligned_cols=76  Identities=30%  Similarity=0.625  Sum_probs=68.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ....+|+||||+. ++|...+. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        79 ~~~~~~lv~e~~~-~~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          79 SFNDVYIVQELME-TDLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             ccceEEEEehhcc-cCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECccccee
Confidence            3456899999996 58888774 4579999999999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG1151|consensus

Probab=99.72  E-value=1e-16  Score=152.50  Aligned_cols=170  Identities=25%  Similarity=0.409  Sum_probs=124.1

Q ss_pred             eeeEEEe-cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccCCCCcEEec---CCC
Q psy17600          7 LKQLRMS-DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--GFIHRDIKPDNLLLD---ARG   80 (351)
Q Consensus         7 ~~~~~f~-~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~--~iihrDlkp~Nill~---~~~   80 (351)
                      .+|-.|. |.+.++-|+|||+|.||.-+|..+..++|.+++.++.||+.||.||...  .|||-||||.|||+-   ..|
T Consensus       531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG  610 (775)
T KOG1151|consen  531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG  610 (775)
T ss_pred             eeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence            3343444 6678899999999999999999999999999999999999999999976  499999999999983   568


Q ss_pred             cEEEEecCccccCcCCC--------------cccccccCCC----------CCCcc------------cCCCCCCCCCH-
Q psy17600         81 HIKLSDFGLCTGLKKSH--------------RTDFYRDLSQ----------AKPSD------------FSYPPFCSENP-  123 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~--------------~~~~~~~~~~----------~~~~~------------~~~~Pf~~~~~-  123 (351)
                      .+||+||||++.+....              .|.+|..+..          .-.+|            ++.-||-.... 
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            99999999999775432              1222221110          00111            23578865433 


Q ss_pred             HHH--HHHHHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        124 QET--YRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       124 ~~~--~~~i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +++  ++.|+. ...+.||+..-+|.+|+++|++ |.-..+.|.       ++.++..||+|.-
T Consensus       691 QdILqeNTIlk-AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~-------DV~qLA~dpyllP  746 (775)
T KOG1151|consen  691 QDILQENTILK-ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRI-------DVQQLACDPYLLP  746 (775)
T ss_pred             HHHHhhhchhc-ceeccCCCCCccCHHHHHHHHHHHHhhhhhhh-------hHHHHccCccccc
Confidence            333  344554 3568999999999999999999 544544443       5666668888875

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.72  E-value=1.8e-16  Score=145.08  Aligned_cols=167  Identities=26%  Similarity=0.405  Sum_probs=122.8

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      .+..+.+...+|+|+||+++++|.+++.+...+++..+..++.+++.|+.|||++|++|+||+|+||+++.++.+||+||
T Consensus        64 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~  143 (264)
T cd06626          64 YYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDF  143 (264)
T ss_pred             eeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccc
Confidence            33456778899999999999999999988777899999999999999999999999999999999999999999999999


Q ss_pred             CccccCcCCCc-----------ccccccCC---------CCCCccc------------CCCCCCCCC-HHHHHHHHHcCC
Q psy17600         88 GLCTGLKKSHR-----------TDFYRDLS---------QAKPSDF------------SYPPFCSEN-PQETYRKVMSWR  134 (351)
Q Consensus        88 Gla~~~~~~~~-----------~~~~~~~~---------~~~~~~~------------~~~Pf~~~~-~~~~~~~i~~~~  134 (351)
                      |++........           +..|..+.         .....|.            +..||.+.+ .......+.. .
T Consensus       144 g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~  222 (264)
T cd06626         144 GCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-G  222 (264)
T ss_pred             ccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-C
Confidence            99875432211           11111111         1122232            367887653 3333333333 3


Q ss_pred             CceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        135 DTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       135 ~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ....+|....++.++.++|.+++ .+|.+|..    .+++.   .|||+
T Consensus       223 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~---~~~~~  264 (264)
T cd06626         223 HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELL---QHPFV  264 (264)
T ss_pred             CCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHh---cCCCC
Confidence            44556666556899999999955 78999976    45666   78884

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.72  E-value=3.2e-17  Score=152.05  Aligned_cols=86  Identities=27%  Similarity=0.466  Sum_probs=76.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+..+..+++...+|+||||+++ +|..++...   ..+++..+..++.|++.||.|+|++|++||||||+||+++.++.
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~  138 (284)
T cd07836          60 IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGE  138 (284)
T ss_pred             EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCc
Confidence            44556678888999999999985 888887653   35899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      ++|+|||++.
T Consensus       139 ~~l~d~g~~~  148 (284)
T cd07836         139 LKLADFGLAR  148 (284)
T ss_pred             EEEeecchhh
Confidence            9999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.72  E-value=3.5e-17  Score=150.70  Aligned_cols=88  Identities=24%  Similarity=0.455  Sum_probs=77.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~   78 (351)
                      ..+..+..+.+....|+||||++|++|.+++..    ...+++..+..++.|++.|+.|||. .+++|+||+|+||+++.
T Consensus        70 ~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~  149 (269)
T cd08528          70 NIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE  149 (269)
T ss_pred             CeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC
Confidence            445566678888999999999999999988742    3468999999999999999999996 78999999999999999


Q ss_pred             CCcEEEEecCccc
Q psy17600         79 RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ~~~~kl~DFGla~   91 (351)
                      ++.++|+|||++.
T Consensus       150 ~~~~~l~dfg~~~  162 (269)
T cd08528         150 DDKVTITDFGLAK  162 (269)
T ss_pred             CCcEEEeccccee
Confidence            9999999999964

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.72  E-value=4.2e-17  Score=150.89  Aligned_cols=78  Identities=28%  Similarity=0.541  Sum_probs=71.9

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...+|+||||+++|+|.+++.... .+++..+..++.|++.||.|||.+|++|+||||+||+++.++.++|+|||++..
T Consensus        80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            567999999999999999997654 588999999999999999999999999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.72  E-value=4.5e-17  Score=151.93  Aligned_cols=78  Identities=29%  Similarity=0.536  Sum_probs=70.1

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +...+|+||||++|++|.+++..    ...+++..+..++.|++.||.|+|..|++|+||+|+||+++.++.++|+|||+
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~  151 (287)
T cd06621          72 SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGV  151 (287)
T ss_pred             CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccc
Confidence            34579999999999999887653    34588999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy17600         90 CT   91 (351)
Q Consensus        90 a~   91 (351)
                      +.
T Consensus       152 ~~  153 (287)
T cd06621         152 SG  153 (287)
T ss_pred             cc
Confidence            64

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0584|consensus

Probab=99.72  E-value=5.2e-17  Score=160.28  Aligned_cols=173  Identities=25%  Similarity=0.334  Sum_probs=136.5

Q ss_pred             ceEeeeEEEecCCc--EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecC-
Q psy17600          4 YACLKQLRMSDPIN--LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDA-   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~--lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~-   78 (351)
                      .++..|.++.|..+  +-+|+|.+..|+|..++++.+.++....+.|+.||+.||.|||++.  |||||||.+||+|+. 
T Consensus       102 NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~  181 (632)
T KOG0584|consen  102 NIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN  181 (632)
T ss_pred             ceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC
Confidence            34556667777766  8899999999999999999999999999999999999999999985  999999999999974 


Q ss_pred             CCcEEEEecCccccCcCCCcccccccCCCCCCccc----------------------CCCCCC-CCCHHHHHHHHHcCCC
Q psy17600         79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF----------------------SYPPFC-SENPQETYRKVMSWRD  135 (351)
Q Consensus        79 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~Pf~-~~~~~~~~~~i~~~~~  135 (351)
                      .|.|||+|+|||+.+.........+++....|+.|                      +--||. ..++.++|+++.++..
T Consensus       182 ~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK  261 (632)
T KOG0584|consen  182 LGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK  261 (632)
T ss_pred             cCceeecchhHHHHhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC
Confidence            59999999999987766655555555555554432                      123554 6799999999999865


Q ss_pred             ceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        136 TLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      +-.|-.=  -.++++++|.+.+...+.|+.    +.++.   .||||..-
T Consensus       262 P~sl~kV--~dPevr~fIekCl~~~~~R~s----a~eLL---~d~Ff~~d  302 (632)
T KOG0584|consen  262 PAALSKV--KDPEVREFIEKCLATKSERLS----AKELL---KDPFFDED  302 (632)
T ss_pred             HHHhhcc--CCHHHHHHHHHHhcCchhccC----HHHHh---hChhhccc
Confidence            4444321  368999999996655888887    34555   88999854

>KOG0664|consensus

Probab=99.72  E-value=4.5e-19  Score=159.60  Aligned_cols=74  Identities=27%  Similarity=0.631  Sum_probs=69.0

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .+|++.|.+. .||..+|.....++.+.++.++.||+.||.|||+.+|.||||||.|+|++++..+||||||+++
T Consensus       131 EiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLAR  204 (449)
T KOG0664|consen  131 ELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLAR  204 (449)
T ss_pred             HHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEeccccccc
Confidence            4688899885 6899988888899999999999999999999999999999999999999999999999999985

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.72  E-value=8.5e-17  Score=150.50  Aligned_cols=171  Identities=23%  Similarity=0.389  Sum_probs=122.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+...+|+||||+ +|+|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|
T Consensus        65 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l  143 (298)
T cd07841          65 IGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKL  143 (298)
T ss_pred             hhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEE
Confidence            44455677888999999999 999999998765 7899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce-
Q psy17600         85 SDFGLCTGLKKSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL-  137 (351)
Q Consensus        85 ~DFGla~~~~~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~-  137 (351)
                      +|||++........       +..|..+.       .....|.            +.+||.+.+..+.+.++....... 
T Consensus       144 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~  223 (298)
T cd07841         144 ADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPT  223 (298)
T ss_pred             ccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCc
Confidence            99999876533211       11121111       1111222            357788777666555554211000 


Q ss_pred             --eC---------------CC------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 --VF---------------PP------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 --~~---------------p~------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                        .+               +.      ....+.++.++|.+ +..+|.+|..    ++++.   .|+||++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l---~~~~~~~  287 (298)
T cd07841         224 EENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQAL---EHPYFSN  287 (298)
T ss_pred             hhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHh---hCccccC
Confidence              00               00      01247889999999 4579999985    55666   8899985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.71  E-value=2.3e-16  Score=147.24  Aligned_cols=171  Identities=25%  Similarity=0.398  Sum_probs=126.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|......|+|+||++|++|.+++.. ..+++..+..++.|++.|+.|+|++|++||||+|+||+++.++.++|
T Consensus        78 vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l  156 (285)
T cd06648          78 IVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKL  156 (285)
T ss_pred             hheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEE
Confidence            34455567888999999999999999999877 67899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||++.......       .+..|..+      .+....|.            +..||...++....+.+.... ....
T Consensus       157 ~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~  235 (285)
T cd06648         157 SDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKL  235 (285)
T ss_pred             cccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCC
Confidence            9999876443211       11111111      11222232            267998888888877776532 1111


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +....++.+..++|.++ ..+|.+|..    ++++.   .||||+.
T Consensus       236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il---~~~~~~~  274 (285)
T cd06648         236 KNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELL---NHPFLAK  274 (285)
T ss_pred             cccccCCHHHHHHHHHHcccChhhCcC----HHHHc---cCccccc
Confidence            11123678999999994 578999975    45666   8899975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.71  E-value=3.6e-16  Score=145.85  Aligned_cols=159  Identities=26%  Similarity=0.430  Sum_probs=116.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||++||+|.+++..    ...+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.
T Consensus        97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~  176 (291)
T cd06639          97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA  176 (291)
T ss_pred             CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence            468999999999999998753    3568999999999999999999999999999999999999999999999999987


Q ss_pred             cCcCCC-------cccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCC-CceeCC
Q psy17600         92 GLKKSH-------RTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWR-DTLVFP  140 (351)
Q Consensus        92 ~~~~~~-------~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~-~~~~~p  140 (351)
                      ......       .+..|..+.           .....|+            +.+||...++......+.... ..+..|
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  256 (291)
T cd06639         177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHP  256 (291)
T ss_pred             hcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcc
Confidence            543211       111122221           1223333            258898877766655554321 112222


Q ss_pred             CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        141 PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       141 ~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      .  ..+.+..++|.+. ..+|++|..    ..++.   .||||+
T Consensus       257 ~--~~~~~l~~li~~~l~~~p~~Rps----~~~il---~~~~~~  291 (291)
T cd06639         257 E--KWCRSFNHFISQCLIKDFEARPS----VTHLL---EHPFIK  291 (291)
T ss_pred             c--ccCHHHHHHHHHHhhcChhhCcC----HHHHh---cCcccC
Confidence            2  3567899999994 479999976    56676   889985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.71  E-value=1.8e-16  Score=146.72  Aligned_cols=169  Identities=25%  Similarity=0.416  Sum_probs=120.8

Q ss_pred             eEeeeEEEecC--CcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          5 ACLKQLRMSDP--INLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         5 ~~~~~~~f~~~--~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+..+..+.+.  ..+|+||||+. |+|.+.+.. ...+++..+..++.|++.||.|||++|++||||+|+||+++. +.
T Consensus        60 i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~  137 (282)
T cd07831          60 ILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DI  137 (282)
T ss_pred             ccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CC
Confidence            34455566776  88999999997 578887765 356899999999999999999999999999999999999999 99


Q ss_pred             EEEEecCccccCcCCCc------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCC--
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWR--  134 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~--  134 (351)
                      +||+|||++..+.....      +..|..+.       .....|+            +.+||.+.+..+....+....  
T Consensus       138 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~  217 (282)
T cd07831         138 LKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGT  217 (282)
T ss_pred             eEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCC
Confidence            99999999876532211      11122221       1222332            268998888776655544211  


Q ss_pred             --------------CceeCCCC---------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        135 --------------DTLVFPPE---------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       135 --------------~~~~~p~~---------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                                    ....+|..         ..++.+++++|.++ ..+|++|.+    ++++.   .||||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l---~~~~~  282 (282)
T cd07831         218 PDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQAL---RHPYF  282 (282)
T ss_pred             CCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHh---hCCCC
Confidence                          11122221         13578999999994 579999986    56776   88997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.71  E-value=4.5e-17  Score=155.62  Aligned_cols=77  Identities=30%  Similarity=0.613  Sum_probs=69.5

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+||||+. ++|..++... .+++.....++.|++.||.|||+.||+||||||+||+++.++.+||+|||++..
T Consensus        80 ~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          80 NDKDIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             CCceEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            3456899999997 5999888765 788899999999999999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.71  E-value=2.7e-16  Score=148.22  Aligned_cols=161  Identities=23%  Similarity=0.369  Sum_probs=117.8

Q ss_pred             CcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ..+|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++....
T Consensus        81 ~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          81 DSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             CeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            57999999997 488888765 3568999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCC-------------
Q psy17600         95 KSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRD-------------  135 (351)
Q Consensus        95 ~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~-------------  135 (351)
                      ....       +..|..+.       +....|.            +.+||.+.+..+.+..+.....             
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
T cd07845         160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL  239 (309)
T ss_pred             CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence            2211       11122111       1122222            2689999888888777665211             


Q ss_pred             ----ceeCCCC---------CCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        136 ----TLVFPPE---------VPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       136 ----~~~~p~~---------~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                          ....+..         ...++++.++|.+ |..+|++|.+    ++++.   .||||++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il---~h~~f~~  295 (309)
T cd07845         240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEAL---ESSYFKE  295 (309)
T ss_pred             cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHh---cChhhcc
Confidence                0111111         1258899999999 5579999986    55666   8999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.71  E-value=2.9e-16  Score=143.04  Aligned_cols=166  Identities=25%  Similarity=0.427  Sum_probs=121.8

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      .+..+.+...+|+||||++|++|.+++.+...+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.+||+||
T Consensus        67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~  146 (258)
T cd06632          67 YLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADF  146 (258)
T ss_pred             eeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccC
Confidence            34456778899999999999999999988777999999999999999999999999999999999999999999999999


Q ss_pred             CccccCcCCC------cccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCC
Q psy17600         88 GLCTGLKKSH------RTDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE  142 (351)
Q Consensus        88 Gla~~~~~~~------~~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  142 (351)
                      |++.......      .+..|..+.       .....|.            +..||...........+........+|. 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-  225 (258)
T cd06632         147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPD-  225 (258)
T ss_pred             ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCC-
Confidence            9987543221      111121111       1222332            2578877665555544443222233333 


Q ss_pred             CCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        143 VPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       143 ~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                       .++++.++++.+++ .+|.+|.+    .+++.   .|||+
T Consensus       226 -~~~~~~~~li~~~l~~~p~~Rp~----~~~~l---~~~~~  258 (258)
T cd06632         226 -HLSDEAKDFILKCLQRDPSLRPT----AAELL---EHPFV  258 (258)
T ss_pred             -CcCHHHHHHHHHHhhcCcccCcC----HHHHh---cCCCC
Confidence             36889999999955 69999965    55666   77875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.71  E-value=7.1e-17  Score=150.86  Aligned_cols=87  Identities=29%  Similarity=0.432  Sum_probs=73.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~   80 (351)
                      ..+..+..+++....|+||||++ ++|..++.....  +++..+..++.|++.||+|||+++++||||+|+||+++. ++
T Consensus        62 ~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~  140 (294)
T PLN00009         62 NIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN  140 (294)
T ss_pred             CEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC
Confidence            34556667888899999999996 588888765443  578888899999999999999999999999999999985 45


Q ss_pred             cEEEEecCccc
Q psy17600         81 HIKLSDFGLCT   91 (351)
Q Consensus        81 ~~kl~DFGla~   91 (351)
                      .+||+|||++.
T Consensus       141 ~~kl~dfg~~~  151 (294)
T PLN00009        141 ALKLADFGLAR  151 (294)
T ss_pred             EEEEccccccc
Confidence            79999999974

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.71  E-value=2e-16  Score=144.68  Aligned_cols=173  Identities=24%  Similarity=0.376  Sum_probs=126.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.....+|+||||+++++|.+++.....+++.....++.|++.|+.|+|+ .+++|+||+|+||+++.++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~  140 (264)
T cd06623          61 VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVK  140 (264)
T ss_pred             eeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEE
Confidence            344555678889999999999999999999887889999999999999999999999 9999999999999999999999


Q ss_pred             EEecCccccCcCCCcc-------ccccc------CCCCCCccc------------CCCCCCCC---CHHHHHHHHHcCCC
Q psy17600         84 LSDFGLCTGLKKSHRT-------DFYRD------LSQAKPSDF------------SYPPFCSE---NPQETYRKVMSWRD  135 (351)
Q Consensus        84 l~DFGla~~~~~~~~~-------~~~~~------~~~~~~~~~------------~~~Pf~~~---~~~~~~~~i~~~~~  135 (351)
                      |+|||++.........       ..|..      .......|.            +..||...   +..+..+.+... .
T Consensus       141 l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~  219 (264)
T cd06623         141 IADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG-P  219 (264)
T ss_pred             EccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC-C
Confidence            9999998765322211       11111      111112232            25788776   445555555532 1


Q ss_pred             ceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCC
Q psy17600        136 TLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVD  186 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~id  186 (351)
                      ....+.. .++....++|.+++ .+|+.|.+    ++++.   .||||+..+
T Consensus       220 ~~~~~~~-~~~~~l~~li~~~l~~~p~~R~~----~~~ll---~~~~~~~~~  263 (264)
T cd06623         220 PPSLPAE-EFSPEFRDFISACLQKDPKKRPS----AAELL---QHPFIKKAD  263 (264)
T ss_pred             CCCCCcc-cCCHHHHHHHHHHccCChhhCCC----HHHHH---hCHHHHhcc
Confidence            2222221 16789999999954 68999976    46676   789998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.71  E-value=3.2e-16  Score=145.27  Aligned_cols=170  Identities=26%  Similarity=0.395  Sum_probs=122.1

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..|++...+|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|
T Consensus        62 ~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l  140 (286)
T cd07832          62 VKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKI  140 (286)
T ss_pred             cceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEE
Confidence            44455678888999999999 9999999865 356899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc--------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCC--
Q psy17600         85 SDFGLCTGLKKSHR--------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRD--  135 (351)
Q Consensus        85 ~DFGla~~~~~~~~--------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~--  135 (351)
                      +|||++........        +..|..+.       .....|.            +.+||.+.+....+..+...-.  
T Consensus       141 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~  220 (286)
T cd07832         141 ADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTP  220 (286)
T ss_pred             eeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCC
Confidence            99999876543221        11121111       1122222            2577877776666655543211  


Q ss_pred             ---------------ceeCCCC---------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        136 ---------------TLVFPPE---------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       136 ---------------~~~~p~~---------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                                     .+.++..         ...+.++.++|.++ ..+|.+|..    ++++.   .||||.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l---~h~~~~  286 (286)
T cd07832         221 NEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEAL---RHPYFT  286 (286)
T ss_pred             ChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHh---hCcCcC
Confidence                           1112211         12468899999995 469999996    45666   889984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.71  E-value=1.8e-17  Score=152.63  Aligned_cols=87  Identities=34%  Similarity=0.527  Sum_probs=74.3

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+...+++|||||++|+|.++|...  ..++......++.|++.||.|||+++++|++|++.||+++.++.+|
T Consensus        64 ~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~K  143 (259)
T PF07714_consen   64 VKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVK  143 (259)
T ss_dssp             E-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34444555677799999999999999999876  6789999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       144 l~~f~~~~~  152 (259)
T PF07714_consen  144 LSDFGLSRP  152 (259)
T ss_dssp             EESTTTGEE
T ss_pred             ccccccccc
Confidence            999999753

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.70  E-value=4.4e-17  Score=148.32  Aligned_cols=82  Identities=26%  Similarity=0.451  Sum_probs=74.1

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      ..+.+....|+||||+++++|..++.+    ...+++..+..++.|++.|+.|||++|++|+||+|.||+++.++.+||+
T Consensus        66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~  145 (256)
T cd08530          66 EAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIG  145 (256)
T ss_pred             hhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEe
Confidence            345667889999999999999998865    3568899999999999999999999999999999999999999999999


Q ss_pred             ecCccc
Q psy17600         86 DFGLCT   91 (351)
Q Consensus        86 DFGla~   91 (351)
                      |||++.
T Consensus       146 d~g~~~  151 (256)
T cd08530         146 DLGISK  151 (256)
T ss_pred             eccchh
Confidence            999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0671|consensus

Probab=99.70  E-value=2.8e-17  Score=153.92  Aligned_cols=74  Identities=18%  Similarity=0.303  Sum_probs=63.9

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      .|.=..+.+||+|.+ |-+++++|.++.  +++...++.+..|++.++.+||+.+++|-||||||||+-++.+.++-
T Consensus       159 wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~  234 (415)
T KOG0671|consen  159 WFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTY  234 (415)
T ss_pred             hhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEe
Confidence            366678899999977 669999998754  57889999999999999999999999999999999999776666544

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=5.4e-16  Score=142.65  Aligned_cols=157  Identities=25%  Similarity=0.425  Sum_probs=118.0

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK   95 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~   95 (351)
                      ..+|+||||++|++|.+++.+.+.+++..+..++.|++.|+.|||++|++|+||||+||+++.++.++|+|||+++....
T Consensus        79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence            56899999999999999998877899999999999999999999999999999999999999999999999999875432


Q ss_pred             CC----------cccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCH
Q psy17600         96 SH----------RTDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISE  147 (351)
Q Consensus        96 ~~----------~~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~  147 (351)
                      ..          .+..|..+.      .....|+            +.+||...+..+...++........+|..  +++
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~--~~~  236 (264)
T cd06653         159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDG--VSD  236 (264)
T ss_pred             ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcc--cCH
Confidence            10          011121111      1122232            26899877766666666543333445543  789


Q ss_pred             HHHHHHHHHhcCccccCCCCCChHHHhcCCCCCC
Q psy17600        148 EARETIVRFCSECDRRLGSARGVEELKSLGACQF  181 (351)
Q Consensus       148 ~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~f  181 (351)
                      ++.++|.+++.++.+|..    +.++.   .|||
T Consensus       237 ~~~~~i~~~l~~~~~r~~----~~~~~---~~~~  263 (264)
T cd06653         237 ACRDFLKQIFVEEKRRPT----AEFLL---RHPF  263 (264)
T ss_pred             HHHHHHHHHhcCcccCcc----HHHHh---cCCC
Confidence            999999998888888776    34555   6777

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=7.3e-16  Score=139.93  Aligned_cols=165  Identities=24%  Similarity=0.435  Sum_probs=122.5

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      ....+.+...+|+||||+++++|.+++.....+++..+..++.|++.|+.++|++|++|+||+|+||+++.++.++|+||
T Consensus        64 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~  143 (254)
T cd06627          64 YIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADF  143 (254)
T ss_pred             EEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEecc
Confidence            34456778899999999999999999988888999999999999999999999999999999999999999999999999


Q ss_pred             CccccCcCCCc-------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCC
Q psy17600         88 GLCTGLKKSHR-------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE  142 (351)
Q Consensus        88 Gla~~~~~~~~-------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  142 (351)
                      |++........       +..|..+      ......|+            +..||...+......++... ....+|. 
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~-  221 (254)
T cd06627         144 GVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-DHPPLPE-  221 (254)
T ss_pred             ccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-CCCCCCC-
Confidence            99876543222       1111111      11122232            25788776665555554432 2223333 


Q ss_pred             CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        143 VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       143 ~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                       .++.+.+++|.++ ..+|++|.+    ..++.   .||||
T Consensus       222 -~~~~~~~~~i~~~l~~~p~~R~~----~~~~l---~~~~~  254 (254)
T cd06627         222 -GISPELKDFLMQCFQKDPNLRPT----AKQLL---KHPWI  254 (254)
T ss_pred             -CCCHHHHHHHHHHHhCChhhCcC----HHHHh---cCCCC
Confidence             3688999999994 479999975    45666   78887

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.70  E-value=1.3e-16  Score=146.30  Aligned_cols=168  Identities=23%  Similarity=0.328  Sum_probs=120.8

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEEEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      .+..+.+...+|+||||+++++|.+++... ..+++..+..++.|++.|+.|+|+ .|++|+||||+||+++.++.++|+
T Consensus        64 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~  143 (265)
T cd06605          64 FYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLC  143 (265)
T ss_pred             hheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEe
Confidence            344577788999999999999999999876 788999999999999999999999 999999999999999999999999


Q ss_pred             ecCccccCcCCCc-----ccccccC------CCCCCccc------------CCCCCCCC-----CHHHHHHHHHcCCCce
Q psy17600         86 DFGLCTGLKKSHR-----TDFYRDL------SQAKPSDF------------SYPPFCSE-----NPQETYRKVMSWRDTL  137 (351)
Q Consensus        86 DFGla~~~~~~~~-----~~~~~~~------~~~~~~~~------------~~~Pf~~~-----~~~~~~~~i~~~~~~~  137 (351)
                      |||++........     +..|..+      .+....|.            +..||...     ...+..+.+... ...
T Consensus       144 d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~  222 (265)
T cd06605         144 DFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPP  222 (265)
T ss_pred             ecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCC
Confidence            9999865432111     1111111      11112222            25677654     333444444432 122


Q ss_pred             eCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 VFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ..|.. .++.+.+++|.+ +..+|.+|..    +.++.   .||||+.
T Consensus       223 ~~~~~-~~~~~~~~li~~~l~~~p~~Rpt----~~~ll---~~~~~~~  262 (265)
T cd06605         223 RLPSG-KFSPDFQDFVNLCLIKDPRERPS----YKELL---EHPFIKK  262 (265)
T ss_pred             CCChh-hcCHHHHHHHHHHcCCCchhCcC----HHHHh---hCchhhc
Confidence            22222 168899999999 5579999987    45666   8899964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.70  E-value=4.4e-16  Score=145.31  Aligned_cols=169  Identities=22%  Similarity=0.387  Sum_probs=116.7

Q ss_pred             eeeEEEecCCc-----EEEEEecCCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe
Q psy17600          7 LKQLRMSDPIN-----LYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL   76 (351)
Q Consensus         7 ~~~~~f~~~~~-----lylVmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill   76 (351)
                      ..+..++....     +|+||||+++ +|.+++...     ..+++..+..++.||+.||.|||.+||+||||||+||++
T Consensus        65 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~  143 (295)
T cd07837          65 RLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV  143 (295)
T ss_pred             ceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE
Confidence            34445555554     8999999985 888887642     357999999999999999999999999999999999999


Q ss_pred             cC-CCcEEEEecCccccCcCCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHH
Q psy17600         77 DA-RGHIKLSDFGLCTGLKKSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRK  129 (351)
Q Consensus        77 ~~-~~~~kl~DFGla~~~~~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~  129 (351)
                      +. ++.+||+|||++........       +..|..+.       .....|.            +.+||.+.+..+.+.+
T Consensus       144 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~  223 (295)
T cd07837         144 DKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH  223 (295)
T ss_pred             ecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            98 88999999999875422111       11111111       1222232            2678888777666555


Q ss_pred             HHcCCC---c------------eeCCCC---------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        130 VMSWRD---T------------LVFPPE---------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       130 i~~~~~---~------------~~~p~~---------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      +.....   .            ..+|..         ..++.++.++|.++ ..+|.+|..    ++++.   .||||+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~eil---~~~~~~  295 (295)
T cd07837         224 IFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKAAL---THPYFD  295 (295)
T ss_pred             HHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHHHh---cCCCcC
Confidence            443110   0            001110         23688999999995 479999986    45666   889985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.70  E-value=1.4e-16  Score=147.54  Aligned_cols=80  Identities=33%  Similarity=0.657  Sum_probs=73.3

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      .+.+....|+||||+ +|+|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|.||+++.++.++|+|||
T Consensus        66 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~  144 (283)
T cd07830          66 VFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFG  144 (283)
T ss_pred             HhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecc
Confidence            456678899999999 889999887654  78999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      +++
T Consensus       145 ~~~  147 (283)
T cd07830         145 LAR  147 (283)
T ss_pred             cce
Confidence            864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0662|consensus

Probab=99.70  E-value=9.8e-17  Score=136.77  Aligned_cols=172  Identities=21%  Similarity=0.373  Sum_probs=122.5

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +.++-....+.++-+|+|||. .+|..+... ++.++.+.++.++.|++.|+.|||++++.||||||.|+||+.+|.+|+
T Consensus        64 vrl~dvlhsdkkltlvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkl  142 (292)
T KOG0662|consen   64 VRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKL  142 (292)
T ss_pred             eehhhhhccCceeEEeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEe
Confidence            333334456778999999995 688877754 577899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc-------ccccccC-------CCCCCccc-------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         85 SDFGLCTGLKKSHR-------TDFYRDL-------SQAKPSDF-------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        85 ~DFGla~~~~~~~~-------~~~~~~~-------~~~~~~~~-------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      +|||+++.++...+       +-+|+.+       -|..+.|.             ++|-|.+.+..+...+|...-+.+
T Consensus       143 adfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p  222 (292)
T KOG0662|consen  143 ADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP  222 (292)
T ss_pred             cccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCC
Confidence            99999986654322       1122221       12222222             367888888877776665422211


Q ss_pred             ---------------eCCCCC----------CCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        138 ---------------VFPPEV----------PISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       138 ---------------~~p~~~----------~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                                     .+|...          .++...+|++.+|+ .+|.+|+.    ++.+.   .||||.+.
T Consensus       223 ~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaal---qhpyf~d~  289 (292)
T KOG0662|consen  223 TEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAAL---QHPYFSDF  289 (292)
T ss_pred             ccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHh---cCcccccc
Confidence                           122111          14567899999955 68999987    45555   78999764

>KOG1167|consensus

Probab=99.69  E-value=5.7e-17  Score=153.47  Aligned_cols=84  Identities=25%  Similarity=0.400  Sum_probs=73.1

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~~~kl   84 (351)
                      ..+...|-..+++.+||||.+.-+..++..   .++..+++.|+..++.||.++|.+||||||+||.|+|.+. .+.-.|
T Consensus        98 ~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~L  174 (418)
T KOG1167|consen   98 IKLNGCFRNNDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVL  174 (418)
T ss_pred             hcchhhhccCCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceE
Confidence            334455777888999999999999988884   4778899999999999999999999999999999999975 477889


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+|..
T Consensus       175 vDFgLA~~  182 (418)
T KOG1167|consen  175 VDFGLAQR  182 (418)
T ss_pred             EechhHHH
Confidence            99999864

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.69  E-value=1.2e-16  Score=150.98  Aligned_cols=84  Identities=29%  Similarity=0.376  Sum_probs=72.6

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +.....+.+....|+||||+. |+|.+.+.. ...+++..+..++.|++.|+.|||+++++||||+|+||+++.++.++|
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl  156 (308)
T cd06634          78 IQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL  156 (308)
T ss_pred             ccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEE
Confidence            334445677788999999997 577776653 456899999999999999999999999999999999999999999999


Q ss_pred             EecCcc
Q psy17600         85 SDFGLC   90 (351)
Q Consensus        85 ~DFGla   90 (351)
                      +|||++
T Consensus       157 ~dfg~~  162 (308)
T cd06634         157 GDFGSA  162 (308)
T ss_pred             CCcccc
Confidence            999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG2345|consensus

Probab=99.69  E-value=9.9e-17  Score=142.78  Aligned_cols=77  Identities=26%  Similarity=0.486  Sum_probs=70.5

Q ss_pred             CcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      ...||++.|...|+|.+.+..    ...++|.+...++.+++.||+++|...  ..||||||.|||+..++.+++.|||.
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccC
Confidence            458999999999999998864    236899999999999999999999998  99999999999999999999999998


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      +..
T Consensus       176 ~~~  178 (302)
T KOG2345|consen  176 ATQ  178 (302)
T ss_pred             ccc
Confidence            754

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.69  E-value=9.8e-17  Score=150.29  Aligned_cols=85  Identities=28%  Similarity=0.476  Sum_probs=73.2

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+...+|+||||+. +.|.+++.. ...+++..+..++.|++.|+.|||+ .||+||||+|+||+++.++.+|
T Consensus        77 ~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~k  155 (296)
T cd06618          77 VKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVK  155 (296)
T ss_pred             HhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEE
Confidence            344556788889999999985 577776654 4568899999999999999999997 5999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       156 L~dfg~~~  163 (296)
T cd06618         156 LCDFGISG  163 (296)
T ss_pred             ECccccch
Confidence            99999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG1095|consensus

Probab=99.69  E-value=6e-17  Score=169.97  Aligned_cols=79  Identities=28%  Similarity=0.547  Sum_probs=72.6

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      ....+|++|||+||||..+|++.       ..+.-.+...++.+|+.|+.||+++++|||||-..|+|++....+||+||
T Consensus       767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF  846 (1025)
T KOG1095|consen  767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF  846 (1025)
T ss_pred             CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence            67789999999999999999875       34678888999999999999999999999999999999999999999999


Q ss_pred             CccccC
Q psy17600         88 GLCTGL   93 (351)
Q Consensus        88 Gla~~~   93 (351)
                      |+|+.+
T Consensus       847 GlArDi  852 (1025)
T KOG1095|consen  847 GLARDI  852 (1025)
T ss_pred             chhHhh
Confidence            999743

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.69  E-value=9.2e-17  Score=150.73  Aligned_cols=78  Identities=29%  Similarity=0.553  Sum_probs=68.7

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+||||+.+ +|...+.. ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus        86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  164 (311)
T cd07866          86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP  164 (311)
T ss_pred             cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence            34568999999974 67776654 45799999999999999999999999999999999999999999999999999753

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.69  E-value=7.5e-16  Score=146.96  Aligned_cols=173  Identities=20%  Similarity=0.309  Sum_probs=125.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..|.+...+|+||||+. |+|.+++.....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|
T Consensus        82 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         82 IMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             eeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEE
Confidence            3444556788889999999997 699999988788999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCC--------------C-------cccccccCC-------CCCCccc------------CCCCCCCCCHH
Q psy17600         85 SDFGLCTGLKKS--------------H-------RTDFYRDLS-------QAKPSDF------------SYPPFCSENPQ  124 (351)
Q Consensus        85 ~DFGla~~~~~~--------------~-------~~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~  124 (351)
                      +|||++......              .       .+..|..+.       .....|.            +.+||.+.+..
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~  240 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI  240 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999998654310              0       011111111       1111222            26899888877


Q ss_pred             HHHHHHHcCCCce---eCCC---------------------CCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCC
Q psy17600        125 ETYRKVMSWRDTL---VFPP---------------------EVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGAC  179 (351)
Q Consensus       125 ~~~~~i~~~~~~~---~~p~---------------------~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h  179 (351)
                      +.+..+.......   .+|.                     ....+.++.++|.++ ..+|++|..    ++++.   .|
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l---~~  313 (335)
T PTZ00024        241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----AKEAL---KH  313 (335)
T ss_pred             HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----HHHHh---cC
Confidence            7766654421111   0110                     012478899999995 469999986    56776   89


Q ss_pred             CCccCC
Q psy17600        180 QFFRGV  185 (351)
Q Consensus       180 ~ff~~i  185 (351)
                      |||++.
T Consensus       314 ~~~~~~  319 (335)
T PTZ00024        314 EYFKSD  319 (335)
T ss_pred             cccCCC
Confidence            999854

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.69  E-value=1.3e-15  Score=139.06  Aligned_cols=167  Identities=23%  Similarity=0.359  Sum_probs=124.1

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.....|++...+|+||||+++++|.+++....  .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++
T Consensus        62 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~  141 (256)
T cd08218          62 VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIK  141 (256)
T ss_pred             eeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence            334446788889999999999999999987543  578999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++........       +..|..+      ......|.            +..||...+..+....+..... ..
T Consensus       142 l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~  220 (256)
T cd08218         142 LGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-PP  220 (256)
T ss_pred             EeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-CC
Confidence            999999865432110       1111111      11112232            3678888888888877765431 12


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      .|.  ..+.+..++|.++ ..+|.+|..    ..++.   .||||
T Consensus       221 ~~~--~~~~~~~~li~~~l~~~p~~Rp~----~~~vl---~~~~~  256 (256)
T cd08218         221 VSS--HYSYDLRNLVSQLFKRNPRDRPS----VNSIL---EKNFI  256 (256)
T ss_pred             Ccc--cCCHHHHHHHHHHhhCChhhCcC----HHHHh---hCcCC
Confidence            222  3688999999995 478999986    45666   78987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.68  E-value=1.1e-15  Score=142.31  Aligned_cols=176  Identities=22%  Similarity=0.353  Sum_probs=129.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..|.+...+|+|+||++|++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++
T Consensus        77 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~  156 (286)
T cd06614          77 IVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVK  156 (286)
T ss_pred             eeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEE
Confidence            3445556888899999999999999999998766 799999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++.......       .+..|..+      ......|.            +..||...++......+... ....
T Consensus       157 l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~  235 (286)
T cd06614         157 LADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP  235 (286)
T ss_pred             ECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC
Confidence            99999876433211       01111111      11222332            36788887777666655442 2222


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      .+....++.+.+++|.+ +..+|..|..    +.++.   .|+||+...|.
T Consensus       236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il---~~~~~~~~~~~  279 (286)
T cd06614         236 LKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELL---QHPFLKKACPK  279 (286)
T ss_pred             CcchhhCCHHHHHHHHHHhccChhhCcC----HHHHh---hChHhhccCch
Confidence            22222267889999999 5578999965    45666   88999986554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.68  E-value=1.2e-15  Score=142.54  Aligned_cols=165  Identities=22%  Similarity=0.408  Sum_probs=117.5

Q ss_pred             eEEEecC--CcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          9 QLRMSDP--INLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         9 ~~~f~~~--~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +..+.+.  ..+|+||||+. ++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+
T Consensus        70 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~  148 (293)
T cd07843          70 KEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKIC  148 (293)
T ss_pred             EEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEe
Confidence            3344555  88999999997 59998887643 58999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCcCCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc---
Q psy17600         86 DFGLCTGLKKSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT---  136 (351)
Q Consensus        86 DFGla~~~~~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~---  136 (351)
                      |||++........       +..|..+.       .....|.            +.+||.+.+..+.+.++...-..   
T Consensus       149 d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~  228 (293)
T cd07843         149 DFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTE  228 (293)
T ss_pred             ecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCch
Confidence            9999876543211       11121111       1112232            26888888777666554421100   


Q ss_pred             --------------------------eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        137 --------------------------LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       137 --------------------------~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                                                -.+|.. .+++.++++|.+ +..+|++|.+    ++++.   .||||
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~t----~~ell---~~~~f  293 (293)
T cd07843         229 KIWPGFSELPGAKKKTFTKYPYNQLRKKFPAL-SLSDNGFDLLNRLLTYDPAKRIS----AEDAL---KHPYF  293 (293)
T ss_pred             HHHHHhhccchhcccccccccchhhhcccccc-CCChHHHHHHHHHhccCccccCC----HHHHh---cCCCC
Confidence                                      001111 158889999999 5579999986    55666   88997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.68  E-value=1.2e-16  Score=147.67  Aligned_cols=80  Identities=30%  Similarity=0.520  Sum_probs=73.1

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      .+.+...+|+||||+. ++|.+++.+. ..+++..+..++.|++.||.|||.+||+|+||+|+||+++.++.++|+|||+
T Consensus        66 ~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~  144 (282)
T cd07829          66 VIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGL  144 (282)
T ss_pred             hhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCc
Confidence            3556688999999998 5899999876 5799999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy17600         90 CT   91 (351)
Q Consensus        90 a~   91 (351)
                      +.
T Consensus       145 ~~  146 (282)
T cd07829         145 AR  146 (282)
T ss_pred             cc
Confidence            74

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.68  E-value=1.3e-16  Score=146.97  Aligned_cols=75  Identities=27%  Similarity=0.473  Sum_probs=66.8

Q ss_pred             EEEEEecCCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         18 LYLIMEFLPGGDMMTLLMKK------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .++++||+.+|+|..++...      ..+++..+..++.|++.|++|||++||+||||||+||+++.++.+||+|||++.
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~  161 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSK  161 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccc
Confidence            47899999999998887432      247888899999999999999999999999999999999999999999999875


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       162 ~  162 (273)
T cd05074         162 K  162 (273)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.68  E-value=1.2e-16  Score=147.69  Aligned_cols=80  Identities=34%  Similarity=0.650  Sum_probs=72.1

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      .+.+...+|+||||+++ +|.+.+... ..+++..+..++.|++.||.|||.++|+|+||||+||+++.++.++|+|||.
T Consensus        66 ~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~  144 (283)
T cd05118          66 VFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGL  144 (283)
T ss_pred             hhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeee
Confidence            45677889999999975 888888663 5789999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy17600         90 CT   91 (351)
Q Consensus        90 a~   91 (351)
                      +.
T Consensus       145 ~~  146 (283)
T cd05118         145 AR  146 (283)
T ss_pred             eE
Confidence            64

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.67  E-value=2e-16  Score=144.86  Aligned_cols=80  Identities=26%  Similarity=0.455  Sum_probs=70.9

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      .+.+....|+||||+++++|..++.+    ...+++..+..++.|++.|+.|||++|++|+||+|+||+++. +.++|+|
T Consensus        70 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d  148 (260)
T cd08222          70 SFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGD  148 (260)
T ss_pred             HHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecc
Confidence            35567789999999999999988863    356899999999999999999999999999999999999974 6799999


Q ss_pred             cCccc
Q psy17600         87 FGLCT   91 (351)
Q Consensus        87 FGla~   91 (351)
                      ||+++
T Consensus       149 ~g~~~  153 (260)
T cd08222         149 FGVSR  153 (260)
T ss_pred             cCcee
Confidence            99864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.67  E-value=1.8e-16  Score=152.30  Aligned_cols=74  Identities=31%  Similarity=0.618  Sum_probs=66.9

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+++|++ |++|.+++.. ..+++..+..++.|++.|+.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        95 ~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~  168 (345)
T cd07877          95 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  168 (345)
T ss_pred             ccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccc
Confidence            4578999987 7899887754 468999999999999999999999999999999999999999999999999863

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.67  E-value=4.2e-16  Score=148.17  Aligned_cols=161  Identities=22%  Similarity=0.429  Sum_probs=119.6

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcCC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS   96 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~~   96 (351)
                      .+|+||||+. ++|.+++.+...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus        78 ~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          78 DVYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             ceEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            7899999997 589999987778999999999999999999999999999999999999999999999999998765432


Q ss_pred             C-----c-----ccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee---------
Q psy17600         97 H-----R-----TDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV---------  138 (351)
Q Consensus        97 ~-----~-----~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~---------  138 (351)
                      .     .     +..|..+       ......|.            +.+||.+.+..+.++.+....+...         
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS  236 (330)
T ss_pred             ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence            2     1     1112111       11122232            3689998888877777665321110         


Q ss_pred             ---------CC---------CCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        139 ---------FP---------PEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       139 ---------~p---------~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                               .+         ....++.++.++|.+ +..+|.+|..    .+++.   .||||+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll---~~~~~~~~  295 (330)
T cd07834         237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEAL---AHPYLAQL  295 (330)
T ss_pred             cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHH---hCccHHhh
Confidence                     00         011257889999999 5579999987    45666   88999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=1.6e-15  Score=139.24  Aligned_cols=159  Identities=27%  Similarity=0.415  Sum_probs=114.0

Q ss_pred             CcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+++++|.+++..    ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence            458999999999999998864    3578999999999999999999999999999999999999999999999999986


Q ss_pred             cCcCCCc-------ccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         92 GLKKSHR-------TDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        92 ~~~~~~~-------~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      .......       +..|..+.           +....|.            +.+||...++......+.... ....+.
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~  240 (275)
T cd06608         162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP-PPTLKS  240 (275)
T ss_pred             ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC-CCCCCc
Confidence            4322110       11121111           1112332            268998776665555554421 111222


Q ss_pred             CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        142 EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       142 ~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ....+.+.+++|.+ +..+|++|..    ++++.   .|||+
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll---~~~~~  275 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPF----MEELL---EHPFI  275 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcC----HHHHh---cCCCC
Confidence            12257789999999 4579999986    45666   78884

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.67  E-value=1.7e-15  Score=138.18  Aligned_cols=159  Identities=31%  Similarity=0.467  Sum_probs=117.8

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeeccCCCCcEEecCCCcEEE
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIH-----KLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH-----~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +...+|++|||+++++|.+++..    ...+++..+..++.|++.||.|+|     ..+++|+||||+||+++.++.+||
T Consensus        72 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl  151 (265)
T cd08217          72 SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKL  151 (265)
T ss_pred             CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEE
Confidence            44568999999999999999865    357899999999999999999999     889999999999999999999999


Q ss_pred             EecCccccCcCCCc-------ccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSHR-------TDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~~-------~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||++........       +..|..+.      .....|.            +..||...+.....+.+.... ...+
T Consensus       152 ~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~  230 (265)
T cd08217         152 GDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK-FRRI  230 (265)
T ss_pred             ecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC-CCCC
Confidence            99999886543221       11111111      1111222            368998888777777766532 1223


Q ss_pred             CCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        140 PPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      |.  ..+.++.+++.+++ .+|.+|..    .+++.   .|||.
T Consensus       231 ~~--~~~~~~~~l~~~~l~~~p~~Rp~----~~~il---~~~~~  265 (265)
T cd08217         231 PY--RYSSELNEVIKSMLNVDPDKRPS----TEELL---QLPLI  265 (265)
T ss_pred             cc--ccCHHHHHHHHHHccCCcccCCC----HHHHh---hCCCC
Confidence            32  36789999999955 69999975    45666   77874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.67  E-value=3.1e-15  Score=135.02  Aligned_cols=169  Identities=25%  Similarity=0.396  Sum_probs=121.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+.....|.+....|+++||++|++|.+++... ..+++..+..++.|++.|+.+||.+|++|+||+|+||+++.++.++
T Consensus        59 i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~  138 (253)
T cd05122          59 IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK  138 (253)
T ss_pred             EeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEE
Confidence            344455677888999999999999999998775 5789999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-c-----cccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         84 LSDFGLCTGLKKSHR-T-----DFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        84 l~DFGla~~~~~~~~-~-----~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      |+|||++........ .     ..|..+      ......|.            +..||...+.......+.. ......
T Consensus       139 l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~  217 (253)
T cd05122         139 LIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGL  217 (253)
T ss_pred             EeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCc
Confidence            999999876544321 1     111111      11122232            2578877755544443333 222233


Q ss_pred             CCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCC
Q psy17600        140 PPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQF  181 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~f  181 (351)
                      +.....+.+..++|.+++ .+|++|..    +.++.   .|||
T Consensus       218 ~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l---~~~~  253 (253)
T cd05122         218 RNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLL---KHPF  253 (253)
T ss_pred             CcccccCHHHHHHHHHHccCChhhCCC----HHHHh---cCCC
Confidence            333334789999999954 78999975    45666   6676

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.66  E-value=7e-16  Score=147.54  Aligned_cols=162  Identities=23%  Similarity=0.388  Sum_probs=116.1

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK   95 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~   95 (351)
                      ..+|+||||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            45899999995 78999998888899999999999999999999999999999999999999999999999999875432


Q ss_pred             CC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc-------------
Q psy17600         96 SH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT-------------  136 (351)
Q Consensus        96 ~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~-------------  136 (351)
                      ..       .+..|..+       ......|.            +.+||.+.+....+..+....+.             
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd07858         161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEK  240 (337)
T ss_pred             CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchh
Confidence            21       11111111       12222332            26888877655444333221000             


Q ss_pred             -------e---eCC----CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        137 -------L---VFP----PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       137 -------~---~~p----~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                             +   ..+    ....+++++.++|.++ ..+|.+|.+    ++++.   .||||+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell---~h~~~~~~  297 (337)
T cd07858         241 ARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEAL---AHPYLASL  297 (337)
T ss_pred             hhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHHH---cCcchhhh
Confidence                   0   000    0124788999999995 569999986    56676   88999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.66  E-value=4.4e-16  Score=148.64  Aligned_cols=85  Identities=27%  Similarity=0.552  Sum_probs=72.6

Q ss_pred             eEeeeEEEec-CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSD-PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~-~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+.....|.. ...+|+||||+ +++|..++.. ..+++..+..++.|++.||.|||+++|+||||+|.||+++.++.++
T Consensus        71 iv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~  148 (328)
T cd07856          71 IISLSDIFISPLEDIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLK  148 (328)
T ss_pred             eeeEeeeEecCCCcEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEE
Confidence            3444455654 56799999998 5789888754 4688888999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       149 l~dfg~~~  156 (328)
T cd07856         149 ICDFGLAR  156 (328)
T ss_pred             eCcccccc
Confidence            99999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0983|consensus

Probab=99.66  E-value=3.2e-16  Score=141.37  Aligned_cols=173  Identities=23%  Similarity=0.345  Sum_probs=127.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~   81 (351)
                      |++..+.+|-....+++.||.|. --+..++.+ .++++|..+-.+...++.||.||.. ++|||||+||+|||+|..|.
T Consensus       152 yIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~Gn  230 (391)
T KOG0983|consen  152 YIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGN  230 (391)
T ss_pred             eeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCC
Confidence            67888889999999999999873 344444443 3678999888889999999999985 58999999999999999999


Q ss_pred             EEEEecCccccCcCCCc------ccccccCC---------CCCCcc-c-----------CCCCCCCC-CHHHHHHHHHcC
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRDLS---------QAKPSD-F-----------SYPPFCSE-NPQETYRKVMSW  133 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~~~---------~~~~~~-~-----------~~~Pf~~~-~~~~~~~~i~~~  133 (351)
                      +|+||||++..+..+..      ...|..+.         |....| |           +.-||.+. ...++..+|++ 
T Consensus       231 iKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-  309 (391)
T KOG0983|consen  231 IKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-  309 (391)
T ss_pred             EEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-
Confidence            99999999876544321      11222211         111122 2           25688875 45678888887 


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      ......|....+|+..++++.. |.+|+.+|....    ++.   +|||.+..
T Consensus       310 ~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~----~Ll---~h~Fi~~y  355 (391)
T KOG0983|consen  310 EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYN----KLL---EHPFIKRY  355 (391)
T ss_pred             cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchH----HHh---cCcceeec
Confidence            4556666666699999999999 678888887653    344   78887643

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.66  E-value=2.6e-16  Score=150.94  Aligned_cols=76  Identities=28%  Similarity=0.594  Sum_probs=66.8

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~~~kl~DFGla~   91 (351)
                      +...+|+||||+. ++|.+.+.. +.+++..++.++.|++.||.|||++||+||||||+||+++. ++.++|+|||++.
T Consensus        87 ~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~  163 (342)
T cd07854          87 ELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLAR  163 (342)
T ss_pred             ccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccce
Confidence            3456899999997 589888754 56899999999999999999999999999999999999975 4578999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1026|consensus

Probab=99.66  E-value=2.5e-16  Score=160.29  Aligned_cols=89  Identities=22%  Similarity=0.351  Sum_probs=76.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIK   70 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlk   70 (351)
                      +|.++..=-..+-+|+|+|||..|||.++|+.+.              .++..+...++.||+.|++||-++.+|||||-
T Consensus       551 IVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLA  630 (774)
T KOG1026|consen  551 IVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLA  630 (774)
T ss_pred             eEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchh
Confidence            4445555556677999999999999999997431              26777888899999999999999999999999


Q ss_pred             CCcEEecCCCcEEEEecCccccC
Q psy17600         71 PDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ..|.|++++-.|||+||||++.+
T Consensus       631 TRNCLVge~l~VKIsDfGLsRdi  653 (774)
T KOG1026|consen  631 TRNCLVGENLVVKISDFGLSRDI  653 (774)
T ss_pred             hhhceeccceEEEecccccchhh
Confidence            99999999999999999998643

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.66  E-value=1.4e-15  Score=141.07  Aligned_cols=167  Identities=25%  Similarity=0.413  Sum_probs=116.7

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      .+..+++...+|+||||+. ++|..++..  ...+++..+..++.|++.|+.|||.++++|+||+|+||+++.++.+||+
T Consensus        64 ~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~  142 (284)
T cd07860          64 LLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA  142 (284)
T ss_pred             hhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEe
Confidence            3445678889999999996 689888865  3568999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCcCCCc-------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc---
Q psy17600         86 DFGLCTGLKKSHR-------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT---  136 (351)
Q Consensus        86 DFGla~~~~~~~~-------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~---  136 (351)
                      |||++........       +..|..+.       .....|.            +..||.+.+......++....+.   
T Consensus       143 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  222 (284)
T cd07860         143 DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE  222 (284)
T ss_pred             eccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            9999875432211       11121111       1112232            25788777655444333221000   


Q ss_pred             -------------eeCCC---------CCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        137 -------------LVFPP---------EVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       137 -------------~~~p~---------~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                                   ..+|.         ...++++++++|.+++ .+|.+|.+    ++++.   .||||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l---~~~~f  284 (284)
T cd07860         223 VVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAAL---AHPFF  284 (284)
T ss_pred             hhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHh---cCCCC
Confidence                         01111         1236889999999955 69999987    45666   88998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.65  E-value=4.4e-16  Score=168.71  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=68.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCCCCcEEecCCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH---KLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH---~~~iihrDlkp~Nill~~~~   80 (351)
                      .++..+..+.+....|+||||++||+|.+++.   .+++.....++.|++.|++|+|   +.+|+|||+||+||+++.++
T Consensus       744 nIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~  820 (968)
T PLN00113        744 NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD  820 (968)
T ss_pred             CcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC
Confidence            34556667888889999999999999999995   3788889999999999999999   66999999999999998877


Q ss_pred             cEEEE
Q psy17600         81 HIKLS   85 (351)
Q Consensus        81 ~~kl~   85 (351)
                      ..++.
T Consensus       821 ~~~~~  825 (968)
T PLN00113        821 EPHLR  825 (968)
T ss_pred             ceEEE
Confidence            76654

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.65  E-value=5.9e-15  Score=139.72  Aligned_cols=171  Identities=21%  Similarity=0.244  Sum_probs=121.2

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+....|+||||+. |+|.+.+.. ...+++..+..++.|++.|+.|||++|++|+||+|+||+++.++.++|
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL  162 (313)
T cd06633          84 IEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKL  162 (313)
T ss_pred             ccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEE
Confidence            444556778889999999996 577777754 456899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC---cccccccCCC---------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCC
Q psy17600         85 SDFGLCTGLKKSH---RTDFYRDLSQ---------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFP  140 (351)
Q Consensus        85 ~DFGla~~~~~~~---~~~~~~~~~~---------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p  140 (351)
                      +|||++.......   .+..|..+..         ....|.            +.+||...+......++..... ... 
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~-  240 (313)
T cd06633         163 ADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS-PTL-  240 (313)
T ss_pred             eecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCC-
Confidence            9999986432211   1111222111         111222            2578888776666555543211 111 


Q ss_pred             CCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCC
Q psy17600        141 PEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVD  186 (351)
Q Consensus       141 ~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~id  186 (351)
                      ....++...+++|.+++ .+|.+|..    .+++.   .||||+..+
T Consensus       241 ~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l---~~~~~~~~~  280 (313)
T cd06633         241 QSNEWTDSFRGFVDYCLQKIPQERPA----SAELL---RHDFVRRDR  280 (313)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcC----HHHHh---cCcccCCCc
Confidence            11235678999999955 79999987    45666   889998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.65  E-value=1.7e-15  Score=145.43  Aligned_cols=160  Identities=26%  Similarity=0.459  Sum_probs=114.2

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcCC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS   96 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~~   96 (351)
                      .+|+||||+ |++|..++.. ..+++..++.++.|++.|+.|||++||+||||||+||+++.++.++|+|||++......
T Consensus        94 ~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  171 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE  171 (343)
T ss_pred             eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence            469999999 7899888754 57999999999999999999999999999999999999999999999999998754322


Q ss_pred             Cc----ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce----------------
Q psy17600         97 HR----TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL----------------  137 (351)
Q Consensus        97 ~~----~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~----------------  137 (351)
                      ..    +..|..+.       .....|+            +.+||.+.+....+.++.......                
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNY  251 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHH
Confidence            11    11111111       1112222            368998877666655544321110                


Q ss_pred             --eCCC---------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        138 --VFPP---------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       138 --~~p~---------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                        ..|.         ...+++++.++|.+ +..+|.+|.+    +.++.   .||||+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~~l---~~~~~~~~  304 (343)
T cd07880         252 VKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAEAL---AHPYFEEF  304 (343)
T ss_pred             HHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHHHh---cCccHhhh
Confidence              0000         02467889999999 5579999997    45666   89999865

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.65  E-value=5.1e-15  Score=134.12  Aligned_cols=166  Identities=26%  Similarity=0.432  Sum_probs=118.9

Q ss_pred             eeEEEecC--CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          8 KQLRMSDP--INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         8 ~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      .+..+.+.  ..+|+||||+++++|.+++.+...+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+
T Consensus        64 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~  143 (260)
T cd06606          64 YYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLA  143 (260)
T ss_pred             EEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEc
Confidence            33455566  7899999999999999999887789999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCcCCCc----c-----cccccCC------CCCCccc------------CCCCCCCCC-HHHHHHHHHcCCCce
Q psy17600         86 DFGLCTGLKKSHR----T-----DFYRDLS------QAKPSDF------------SYPPFCSEN-PQETYRKVMSWRDTL  137 (351)
Q Consensus        86 DFGla~~~~~~~~----~-----~~~~~~~------~~~~~~~------------~~~Pf~~~~-~~~~~~~i~~~~~~~  137 (351)
                      |||.+........    .     ..|..+.      .....|.            +..||...+ .......+.......
T Consensus       144 d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd06606         144 DFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPP  223 (260)
T ss_pred             ccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCc
Confidence            9999875543321    1     1111111      1112221            257777655 333333333222233


Q ss_pred             eCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        138 VFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ..|..  .+.+.+++|.+ +..+|++|..    ..++.   .||||
T Consensus       224 ~~~~~--~~~~l~~~i~~~l~~~p~~Rp~----~~~ll---~~~~~  260 (260)
T cd06606         224 EIPEH--LSEEAKDFLRKCLRRDPKKRPT----ADELL---QHPFL  260 (260)
T ss_pred             CCCcc--cCHHHHHHHHHhCcCChhhCCC----HHHHh---hCCCC
Confidence            34433  57899999999 4578999865    45666   88987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.65  E-value=2.5e-15  Score=136.98  Aligned_cols=164  Identities=24%  Similarity=0.396  Sum_probs=119.4

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc-EEEE
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH-IKLS   85 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~-~kl~   85 (351)
                      +..+.+...+|+|+||+++++|.+++.+..  .+++..+..++.|++.|+.|||+++++|+||||+||+++.++. ++|+
T Consensus        65 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~  144 (257)
T cd08225          65 FASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLG  144 (257)
T ss_pred             hheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEec
Confidence            335677888999999999999999987643  4789999999999999999999999999999999999998864 6999


Q ss_pred             ecCccccCcCCCc-------ccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCC
Q psy17600         86 DFGLCTGLKKSHR-------TDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFP  140 (351)
Q Consensus        86 DFGla~~~~~~~~-------~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p  140 (351)
                      |||.+........       +..|..+.      .....|.            +..||...+..+....+.....   .+
T Consensus       145 d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~  221 (257)
T cd08225         145 DFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF---AP  221 (257)
T ss_pred             ccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC---CC
Confidence            9999875432211       11111111      1111222            2578888877777766654321   11


Q ss_pred             CCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        141 PEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       141 ~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      ....++.+.+++|.+++ .+|++|.+    +.++.   .||||
T Consensus       222 ~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll---~~~~~  257 (257)
T cd08225         222 ISPNFSRDLRSLISQLFKVSPRDRPS----ITSIL---KRPFL  257 (257)
T ss_pred             CCCCCCHHHHHHHHHHhccChhhCcC----HHHHh---hCCCC
Confidence            22246889999999954 68999986    55666   88987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.65  E-value=4.4e-15  Score=134.78  Aligned_cols=165  Identities=26%  Similarity=0.414  Sum_probs=123.2

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ....+.+....|+||||++|++|..++.+.    ..+++.....++.+++.|+.+||++|++|+||+|+||+++.++.++
T Consensus        64 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~  143 (258)
T cd08215          64 YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVK  143 (258)
T ss_pred             eEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEE
Confidence            344577778999999999999999999763    6789999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++.......       .+..|..+      ......|.            +..||...+..+....+.... ...
T Consensus       144 l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~  222 (258)
T cd08215         144 LGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-YPP  222 (258)
T ss_pred             ECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-CCC
Confidence            99999986543321       01111111      11122222            367888888777777766532 222


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCc
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      .|.  ..+.+..++|.+++ .+|++|..    ++++.   .||||
T Consensus       223 ~~~--~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll---~~~~~  258 (258)
T cd08215         223 IPS--QYSSELRNLVSSLLQKDPEERPS----IAQIL---QSPFI  258 (258)
T ss_pred             CCC--CCCHHHHHHHHHHcCCChhhCcC----HHHHh---cCCCC
Confidence            232  46789999999954 68999986    45666   78887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.65  E-value=3.3e-15  Score=140.11  Aligned_cols=159  Identities=23%  Similarity=0.358  Sum_probs=109.3

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ...|+||||+. ++|...+... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence            45699999996 5888877654 368999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCc-----------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc--------
Q psy17600         95 KSHR-----------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT--------  136 (351)
Q Consensus        95 ~~~~-----------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~--------  136 (351)
                      ....           +..|..+.       .....|.            +.+||.+.++......+....+.        
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (310)
T cd07865         171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG  250 (310)
T ss_pred             CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence            2111           01121111       1122232            25788777765443332221110        


Q ss_pred             ---------eeCCCCC-----------CCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        137 ---------LVFPPEV-----------PISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       137 ---------~~~p~~~-----------~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                               ..+|...           -.+..++++|.+ +..+|.+|..    ++++.   .||||
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t----~~e~l---~h~~f  310 (310)
T cd07865         251 VDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID----ADTAL---NHDFF  310 (310)
T ss_pred             ccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----HHHHh---cCCCC
Confidence                     1111110           135678899999 5679999987    45666   88998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.64  E-value=4.3e-15  Score=138.24  Aligned_cols=178  Identities=23%  Similarity=0.276  Sum_probs=120.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHH---HH--hCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTL---LM--KKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLD   77 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~---l~--~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~   77 (351)
                      +.+..+..+.++...|++|||+.+ ++.++   +.  ....+++..+..++.|++.||+|||+. +++||||||+||+++
T Consensus        64 ~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~  142 (288)
T cd06616          64 YIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD  142 (288)
T ss_pred             CEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc
Confidence            445556667788899999999864 44433   22  235789999999999999999999975 999999999999999


Q ss_pred             CCCcEEEEecCccccCcCCC------cccccccC---------CCCCCccc------------CCCCCCCCCH-HHHHHH
Q psy17600         78 ARGHIKLSDFGLCTGLKKSH------RTDFYRDL---------SQAKPSDF------------SYPPFCSENP-QETYRK  129 (351)
Q Consensus        78 ~~~~~kl~DFGla~~~~~~~------~~~~~~~~---------~~~~~~~~------------~~~Pf~~~~~-~~~~~~  129 (351)
                      .++.++|+|||++.......      .+..|..+         .+....|.            +.+||...+. .+....
T Consensus       143 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  222 (288)
T cd06616         143 RNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQ  222 (288)
T ss_pred             cCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhh
Confidence            99999999999986543211      11112111         12222333            2578865542 122222


Q ss_pred             HHcCCCceeCCC--CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        130 VMSWRDTLVFPP--EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       130 i~~~~~~~~~p~--~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      +... .....+.  ...++.++.++|.+ +..+|++|.+    .+++.   .||||+...|...
T Consensus       223 ~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~---~~~~~~~~~~~~~  278 (288)
T cd06616         223 VVKG-DPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELL---EHPFIKDYEERNV  278 (288)
T ss_pred             hcCC-CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHh---cChhhhchhhcch
Confidence            2221 1112222  12478899999999 5579999986    45676   8999998777654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.64  E-value=4.5e-15  Score=137.61  Aligned_cols=169  Identities=24%  Similarity=0.395  Sum_probs=119.2

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+....|+||||+. ++|..++....  .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++
T Consensus        61 v~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~  139 (283)
T cd07835          61 VRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALK  139 (283)
T ss_pred             cCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEE
Confidence            334456778889999999995 68999987655  689999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------ccccccCCC-------CCCccc------------CCCCCCCCCHHHHHHHHHcCCC--
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRDLSQ-------AKPSDF------------SYPPFCSENPQETYRKVMSWRD--  135 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~~~~-------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~--  135 (351)
                      |+|||++........       +..|..+..       ....|.            +.+||.+.+......++.....  
T Consensus       140 l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  219 (283)
T cd07835         140 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTP  219 (283)
T ss_pred             EeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            999999875432111       111222211       111222            2688887776554444332100  


Q ss_pred             --------------ceeCCC---------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        136 --------------TLVFPP---------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       136 --------------~~~~p~---------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                                    ...+|.         ...++.++.++|.+ +..+|.+|..    .+++.   .||||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il---~~~~~  283 (283)
T cd07835         220 DEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAAL---QHPYF  283 (283)
T ss_pred             ChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHh---cCCCC
Confidence                          000111         12367899999999 5579999986    45666   88997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG1027|consensus

Probab=99.62  E-value=6.7e-16  Score=156.46  Aligned_cols=90  Identities=27%  Similarity=0.412  Sum_probs=72.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~----l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-   78 (351)
                      ..+.-|++=||...+||..|.|. -+|.+++...+.    ......+....|++.||.|||+.+||||||||.||||.. 
T Consensus       564 NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~  642 (903)
T KOG1027|consen  564 NVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVP  642 (903)
T ss_pred             ceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEcc
Confidence            45667777889999999999996 699999976311    111345677889999999999999999999999999975 


Q ss_pred             --CC--cEEEEecCccccCc
Q psy17600         79 --RG--HIKLSDFGLCTGLK   94 (351)
Q Consensus        79 --~~--~~kl~DFGla~~~~   94 (351)
                        ++  .++|.|||+|+.+.
T Consensus       643 ~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  643 SADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             CCCcceeEEecccccccccC
Confidence              34  67999999998654

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.62  E-value=1e-14  Score=135.00  Aligned_cols=167  Identities=22%  Similarity=0.402  Sum_probs=117.6

Q ss_pred             eeEEEecC--CcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          8 KQLRMSDP--INLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         8 ~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+.+.  ..+|+||||++ ++|..++.+. ..+++..+..++.|++.|+.|||.+|++|+||+|+||+++.++.++|
T Consensus        63 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l  141 (287)
T cd07840          63 LKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKL  141 (287)
T ss_pred             heeeEecCCCCcEEEEecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEE
Confidence            33445555  78999999997 4898888765 57899999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc--------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         85 SDFGLCTGLKKSHR--------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        85 ~DFGla~~~~~~~~--------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      +|||++........        +..|..+.       .....|.            +.+||...+.......+.......
T Consensus       142 ~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~  221 (287)
T cd07840         142 ADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP  221 (287)
T ss_pred             ccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            99999875543221        11121111       1112222            268888888776666554321110


Q ss_pred             ---eCCCC-----------------------CC-CCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        138 ---VFPPE-----------------------VP-ISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       138 ---~~p~~-----------------------~~-~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                         .+|..                       .. .++++.++|.+ +..+|++|..    ++++.   .||||
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l---~~~~~  287 (287)
T cd07840         222 TDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQAL---QHEYF  287 (287)
T ss_pred             chhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHh---hCcCC
Confidence               11100                       01 27888999999 5579999987    44555   78887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1006|consensus

Probab=99.62  E-value=1.2e-16  Score=143.50  Aligned_cols=79  Identities=34%  Similarity=0.594  Sum_probs=64.5

Q ss_pred             cCCcEEEEEecCCCCCHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEEEEec
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLM-----KKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~-----~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      .+...|+.||+|. -+|..+..     ++..++|+..-.+...++.||.||.. ..|||||+||+|||++..|.+|||||
T Consensus       134 ~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDF  212 (361)
T KOG1006|consen  134 SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDF  212 (361)
T ss_pred             cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecc
Confidence            4566899999985 45543332     44678999888888888999999985 58999999999999999999999999


Q ss_pred             CccccC
Q psy17600         88 GLCTGL   93 (351)
Q Consensus        88 Gla~~~   93 (351)
                      |+|..+
T Consensus       213 GIcGqL  218 (361)
T KOG1006|consen  213 GICGQL  218 (361)
T ss_pred             cchHhH
Confidence            998543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.62  E-value=5.4e-15  Score=141.87  Aligned_cols=159  Identities=23%  Similarity=0.407  Sum_probs=116.2

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcCC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS   96 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~~   96 (351)
                      .+|+|+||+ |++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE  171 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence            489999998 6799998865 57999999999999999999999999999999999999999999999999998765332


Q ss_pred             Cc----ccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce----------------
Q psy17600         97 HR----TDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL----------------  137 (351)
Q Consensus        97 ~~----~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~----------------  137 (351)
                      ..    +..|..+       ......|.            +.+||.+.+....+..+.......                
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07851         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY  251 (343)
T ss_pred             ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHH
Confidence            11    1112111       11122332            368998888777776665421110                


Q ss_pred             ----------eCCC-CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 ----------VFPP-EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ----------~~p~-~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                                .++. ....++++.++|.+ |..+|.+|.+    ++++.   .||||+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~ell---~h~~~~~  303 (343)
T cd07851         252 IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAEAL---AHPYLAE  303 (343)
T ss_pred             HHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHHHh---cCCCccc
Confidence                      0000 01358899999999 5579999986    55676   8899984

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.61  E-value=8.8e-15  Score=136.97  Aligned_cols=159  Identities=26%  Similarity=0.393  Sum_probs=112.1

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ..+|+||||+++ ++...+... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++....
T Consensus        89 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  167 (302)
T cd07864          89 GAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYN  167 (302)
T ss_pred             CcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccccc
Confidence            389999999986 677776643 468999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCc--------ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCC---ceeCC----
Q psy17600         95 KSHR--------TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRD---TLVFP----  140 (351)
Q Consensus        95 ~~~~--------~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~---~~~~p----  140 (351)
                      ....        +..|..+.       .....|.            +++||...+..+....+.....   ...+|    
T Consensus       168 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (302)
T cd07864         168 SEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIK  247 (302)
T ss_pred             CCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccc
Confidence            2211        11111111       1122232            3688887777666555443211   10111    


Q ss_pred             -------------------CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        141 -------------------PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       141 -------------------~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                                         ....++.++.++|.++ ..+|.+|..    ++++.   .||||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il---~~~~~  302 (302)
T cd07864         248 LPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT----AEEAL---NSPWL  302 (302)
T ss_pred             cccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC----HHHHh---cCCCC
Confidence                               0112578999999995 479999986    45666   88986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0668|consensus

Probab=99.61  E-value=5.4e-16  Score=136.76  Aligned_cols=71  Identities=35%  Similarity=0.656  Sum_probs=63.9

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-CcEEEEecCccc
Q psy17600         18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHIKLSDFGLCT   91 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~~kl~DFGla~   91 (351)
                      --||+||+.+-|...+.   ..++.-++++|+.|++.||.|||++||+|||+||.|++|+.. ..++|+|+|+|.
T Consensus       110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE  181 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE  181 (338)
T ss_pred             chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHh
Confidence            45899999999887766   468889999999999999999999999999999999999965 579999999974

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.61  E-value=1.2e-14  Score=139.33  Aligned_cols=164  Identities=23%  Similarity=0.404  Sum_probs=115.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK   95 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~   95 (351)
                      .++|+||||+. ++|..++  ...+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++....
T Consensus        93 ~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879          93 QDFYLVMPYMQ-TDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA  169 (342)
T ss_pred             ceEEEEecccc-cCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence            45799999996 4777665  24689999999999999999999999999999999999999999999999999875432


Q ss_pred             CCc----ccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc----------------
Q psy17600         96 SHR----TDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT----------------  136 (351)
Q Consensus        96 ~~~----~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~----------------  136 (351)
                      ...    +..|..+.       +....|+            +..||.+.+....+..+....+.                
T Consensus       170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T cd07879         170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKS  249 (342)
T ss_pred             CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHH
Confidence            211    11121111       1112232            36899888776666554431100                


Q ss_pred             -----eeCCC------CCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        137 -----LVFPP------EVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       137 -----~~~p~------~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                           ..+|.      ....++++.++|.++ ..+|.+|.+    ++++.   .||||+++.+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~l---~h~~f~~~~~~~  307 (342)
T cd07879         250 YIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEAL---EHPYFDSFRDAD  307 (342)
T ss_pred             HHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHHh---cCcchhhccccc
Confidence                 00111      013578899999995 479999986    46676   899999886543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG2052|consensus

Probab=99.60  E-value=2.2e-15  Score=143.62  Aligned_cols=74  Identities=24%  Similarity=0.464  Sum_probs=68.8

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------GFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~--------~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      .||||.||-+.|+|+++|.+ ..++.+....++..++.||.|||..        .|.|||||..|||+.++|.+-|+|+|
T Consensus       283 QLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             EEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence            68999999999999999977 6799999999999999999999962        39999999999999999999999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      ||-
T Consensus       362 LAv  364 (513)
T KOG2052|consen  362 LAV  364 (513)
T ss_pred             eeE
Confidence            974

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.59  E-value=3.9e-15  Score=128.67  Aligned_cols=56  Identities=25%  Similarity=0.265  Sum_probs=50.9

Q ss_pred             CCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         28 GDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        28 g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |+|.+++.. ...+++.++..++.|++.||.|||+++      ||+||+++.++.+|+  ||+++
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~   57 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVA   57 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceE
Confidence            789999986 456999999999999999999999998      999999999999998  99864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1094|consensus

Probab=99.59  E-value=1.3e-15  Score=149.30  Aligned_cols=80  Identities=28%  Similarity=0.459  Sum_probs=70.0

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .++-+++||||+++|||.+++.++.  .........++.||..|+.||.+.++||||+-+.|+|++.++++||+|||+++
T Consensus       606 ~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  606 QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccc
Confidence            3455889999999999999998763  33455667789999999999999999999999999999999999999999986


Q ss_pred             cC
Q psy17600         92 GL   93 (351)
Q Consensus        92 ~~   93 (351)
                      .+
T Consensus       686 ~l  687 (807)
T KOG1094|consen  686 NL  687 (807)
T ss_pred             cc
Confidence            43

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.58  E-value=7.9e-15  Score=130.31  Aligned_cols=83  Identities=46%  Similarity=0.813  Sum_probs=75.2

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      +..+......|+++||+.+++|.+++..... +++.....++.+++.++.++|..+++|+|++|.||+++.++.++|+||
T Consensus        63 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~  142 (225)
T smart00221       63 YGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADF  142 (225)
T ss_pred             eeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeC
Confidence            3345566889999999999999999987666 899999999999999999999999999999999999999999999999


Q ss_pred             Cccc
Q psy17600         88 GLCT   91 (351)
Q Consensus        88 Gla~   91 (351)
                      |++.
T Consensus       143 g~~~  146 (225)
T smart00221      143 GLAR  146 (225)
T ss_pred             ceee
Confidence            9864

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.58  E-value=5.9e-15  Score=153.87  Aligned_cols=90  Identities=44%  Similarity=0.749  Sum_probs=82.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..+++...+||||||+.||+|..++...+.+++..++.++.||+.||.|||.++||||||||+|||++.++.+|
T Consensus        65 ~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk  144 (669)
T cd05610          65 FIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIK  144 (669)
T ss_pred             CcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEE
Confidence            34556677888999999999999999999998878899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccC
Q psy17600         84 LSDFGLCTGL   93 (351)
Q Consensus        84 l~DFGla~~~   93 (351)
                      |+|||+++..
T Consensus       145 L~DFGls~~~  154 (669)
T cd05610         145 LTDFGLSKVT  154 (669)
T ss_pred             EEeCCCCccc
Confidence            9999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0670|consensus

Probab=99.58  E-value=1.2e-15  Score=147.63  Aligned_cols=86  Identities=31%  Similarity=0.510  Sum_probs=72.4

Q ss_pred             eEeee-EEEecCCcEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQ-LRMSDPINLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~-~~f~~~~~lylVmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      +|+.+ -+|.-.++|+||+|-+. -+|...|.+-+   .|....++.|+.|+.+||..|...||+|.||||+|||++...
T Consensus       495 Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k  573 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK  573 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence            34433 35788899999999774 68999887643   467788999999999999999999999999999999998764


Q ss_pred             -cEEEEecCccc
Q psy17600         81 -HIKLSDFGLCT   91 (351)
Q Consensus        81 -~~kl~DFGla~   91 (351)
                       .+||||||.|.
T Consensus       574 ~iLKLCDfGSA~  585 (752)
T KOG0670|consen  574 NILKLCDFGSAS  585 (752)
T ss_pred             ceeeeccCcccc
Confidence             67999999874

>KOG0196|consensus

Probab=99.57  E-value=2.3e-15  Score=151.56  Aligned_cols=88  Identities=19%  Similarity=0.340  Sum_probs=75.7

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      ++...--...-+.||.|||++|.|..+|+++ +.|...+....+..|+.|+.||...+.|||||-..|||++.+-.+|++
T Consensus       694 rLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVs  773 (996)
T KOG0196|consen  694 RLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVS  773 (996)
T ss_pred             EEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEec
Confidence            3333344455678999999999999999865 568888888899999999999999999999999999999999999999


Q ss_pred             ecCccccCc
Q psy17600         86 DFGLCTGLK   94 (351)
Q Consensus        86 DFGla~~~~   94 (351)
                      |||+++.+.
T Consensus       774 DFGLSRvle  782 (996)
T KOG0196|consen  774 DFGLSRVLE  782 (996)
T ss_pred             cccceeecc
Confidence            999987543

>KOG0576|consensus

Probab=99.57  E-value=1.7e-14  Score=143.29  Aligned_cols=173  Identities=22%  Similarity=0.292  Sum_probs=123.8

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      +..+.++-...++|+.||||.||+|.+.-+-.+.++|.++.+.+.+.+.|+.|+|++|=+|||+|-.|||++..|.+|++
T Consensus        75 vay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvkla  154 (829)
T KOG0576|consen   75 VAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLA  154 (829)
T ss_pred             HHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeec
Confidence            33455566678899999999999999988888899999999999999999999999999999999999999999999999


Q ss_pred             ecCccccCcCC--C-----cccccc---------cCCCCCCcccC------------CCCCCCCCH-HHHHHHHHcCCCc
Q psy17600         86 DFGLCTGLKKS--H-----RTDFYR---------DLSQAKPSDFS------------YPPFCSENP-QETYRKVMSWRDT  136 (351)
Q Consensus        86 DFGla~~~~~~--~-----~~~~~~---------~~~~~~~~~~~------------~~Pf~~~~~-~~~~~~i~~~~~~  136 (351)
                      |||.+..+...  .     .+.+|.         ..+|...+|+|            .+|-..--+ ..+|---.+.-..
T Consensus       155 Dfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qp  234 (829)
T KOG0576|consen  155 DFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQP  234 (829)
T ss_pred             ccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCC
Confidence            99987644211  1     233332         23455555554            345433333 3333333332233


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      +..-+....++-.-+|++. |-++|.+|-...    ..   ..|||...-
T Consensus       235 p~lkDk~kws~~fh~fvK~altknpKkRptae----kl---L~h~fvs~~  277 (829)
T KOG0576|consen  235 PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAE----KL---LQHPFVSQT  277 (829)
T ss_pred             CcccCCccchHHHHHHHHHHhcCCCccCCChh----hh---eeceeeccc
Confidence            3333444578888899998 678999998743    22   258887654

>KOG3653|consensus

Probab=99.57  E-value=5.6e-15  Score=141.83  Aligned_cols=78  Identities=27%  Similarity=0.425  Sum_probs=70.4

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeccCCCCcEEecCCCcEEEE
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL---------GFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---------~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      ...++||+||-+.|+|.++|.. ..++...+..++..+..||+|||.-         .|+|||||..|||+.++++.-|+
T Consensus       280 ~~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa  358 (534)
T KOG3653|consen  280 RMEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA  358 (534)
T ss_pred             ccceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence            4468999999999999999976 4689999999999999999999962         59999999999999999999999


Q ss_pred             ecCccccC
Q psy17600         86 DFGLCTGL   93 (351)
Q Consensus        86 DFGla~~~   93 (351)
                      |||||..+
T Consensus       359 DFGLAl~~  366 (534)
T KOG3653|consen  359 DFGLALRL  366 (534)
T ss_pred             ccceeEEe
Confidence            99998543

>KOG1290|consensus

Probab=99.54  E-value=1e-13  Score=133.61  Aligned_cols=64  Identities=27%  Similarity=0.544  Sum_probs=56.3

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~   79 (351)
                      ..+++||+|++ |-+|..+|...  ..++-..++.++.||+.||.|||. .||||-||||+|||+...
T Consensus       158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            46899999988 77899988764  468999999999999999999996 599999999999998643

>KOG4278|consensus

Probab=99.54  E-value=5.8e-15  Score=145.48  Aligned_cols=85  Identities=24%  Similarity=0.427  Sum_probs=71.9

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      ..++++.  -+|||.|||..|+|.++|++..  .++.-...+++.||..|++||..+++|||||-..|.|+..+..+|++
T Consensus       330 GVCT~Ep--PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvA  407 (1157)
T KOG4278|consen  330 GVCTHEP--PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVA  407 (1157)
T ss_pred             hhhccCC--CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEee
Confidence            3344443  4899999999999999998643  35555566677899999999999999999999999999999999999


Q ss_pred             ecCccccCc
Q psy17600         86 DFGLCTGLK   94 (351)
Q Consensus        86 DFGla~~~~   94 (351)
                      ||||++.+.
T Consensus       408 DFGLsRlMt  416 (1157)
T KOG4278|consen  408 DFGLSRLMT  416 (1157)
T ss_pred             ccchhhhhc
Confidence            999987664

>KOG0200|consensus

Probab=99.54  E-value=1.8e-14  Score=148.60  Aligned_cols=79  Identities=28%  Similarity=0.482  Sum_probs=73.3

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      ...+++|+|||..|+|..+++.++                .++..+...+..||+.|++||+++++|||||-..|||+..
T Consensus       374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~  453 (609)
T KOG0200|consen  374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK  453 (609)
T ss_pred             CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC
Confidence            788999999999999999998765                3788888999999999999999999999999999999999


Q ss_pred             CCcEEEEecCccccC
Q psy17600         79 RGHIKLSDFGLCTGL   93 (351)
Q Consensus        79 ~~~~kl~DFGla~~~   93 (351)
                      +..+||+|||+|+..
T Consensus       454 ~~~~kIaDFGlar~~  468 (609)
T KOG0200|consen  454 NKVIKIADFGLARDH  468 (609)
T ss_pred             CCEEEEccccceecc
Confidence            999999999998743

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.53  E-value=1.4e-14  Score=128.03  Aligned_cols=74  Identities=20%  Similarity=0.290  Sum_probs=65.8

Q ss_pred             EEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSI-HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        19 ylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~l-H~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ||||||++|+++.....+...+++..+..++.|++.+|.++ |+.||+||||||+||+++ ++.++|+|||+|...
T Consensus        93 ~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147          93 VLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            89999999988876544556789999999999999999999 699999999999999998 588999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4257|consensus

Probab=99.53  E-value=1.1e-14  Score=143.67  Aligned_cols=81  Identities=28%  Similarity=0.516  Sum_probs=74.0

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...-.|||||+++-|+|..+|+.+ ..++......|+.||+.||.|||+.++|||||-..|||+.+...+||+|||+++.
T Consensus       461 ~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~  540 (974)
T KOG4257|consen  461 VEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY  540 (974)
T ss_pred             eccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence            445689999999999999999754 5788888899999999999999999999999999999999999999999999876


Q ss_pred             Cc
Q psy17600         93 LK   94 (351)
Q Consensus        93 ~~   94 (351)
                      +.
T Consensus       541 ~e  542 (974)
T KOG4257|consen  541 LE  542 (974)
T ss_pred             cc
Confidence            64

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.52  E-value=2.8e-13  Score=121.15  Aligned_cols=162  Identities=38%  Similarity=0.638  Sum_probs=116.4

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +.+....+++|||+.+++|..++.....++...+..++.+++.++.+||+.+++|+||+|.||+++.++.++++|||++.
T Consensus        56 ~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~  135 (244)
T smart00220       56 FEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLAR  135 (244)
T ss_pred             eeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEcccccee
Confidence            44557899999999999999999876668999999999999999999999999999999999999999999999999987


Q ss_pred             cCcCCC------cccccccC------CCCCCccc------------CCCCCCC-CCHHHHHHHHHcCCCceeCCCCCC-C
Q psy17600         92 GLKKSH------RTDFYRDL------SQAKPSDF------------SYPPFCS-ENPQETYRKVMSWRDTLVFPPEVP-I  145 (351)
Q Consensus        92 ~~~~~~------~~~~~~~~------~~~~~~~~------------~~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~-~  145 (351)
                      ......      ....|..+      ......|.            +..||.. .+.....+.+....  ...+.... +
T Consensus       136 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  213 (244)
T smart00220      136 QLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPK--PPFPPPEWKI  213 (244)
T ss_pred             eeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccC--CCCccccccC
Confidence            554321      01111111      11112222            2578877 55666665555422  22222211 6


Q ss_pred             CHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCc
Q psy17600        146 SEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFF  182 (351)
Q Consensus       146 s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff  182 (351)
                      +.+..+++.++ ..+|+.|..    ..++.   .||||
T Consensus       214 ~~~~~~~i~~~l~~~p~~Rp~----~~~~~---~~~~~  244 (244)
T smart00220      214 SPEAKDLIRKLLVKDPEKRLT----AEEAL---QHPFF  244 (244)
T ss_pred             CHHHHHHHHHHccCCchhccC----HHHHh---hCCCC
Confidence            78899999994 569999975    45565   67886

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.51  E-value=3.7e-14  Score=125.14  Aligned_cols=76  Identities=21%  Similarity=0.292  Sum_probs=66.0

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      .||||||++|+++.........+++..+..++.|++.++.++|+ +||+||||||+||+++ ++.++|+|||+|..+.
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            38999999998655443344568888899999999999999999 9999999999999998 8999999999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1345|consensus

Probab=99.51  E-value=1.1e-13  Score=125.00  Aligned_cols=82  Identities=29%  Similarity=0.462  Sum_probs=72.6

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CC-CcEEEEecC
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-AR-GHIKLSDFG   88 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~-~~~kl~DFG   88 (351)
                      .||+.+.+.++||||+.|||.+-+... .+.|..++.+..|++.|++|||++++||||||.+||||- .+ -.+||||||
T Consensus        90 aFqt~d~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG  168 (378)
T KOG1345|consen   90 AFQTSDAYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFG  168 (378)
T ss_pred             HhhcCceEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecc
Confidence            488899999999999999999988664 488999999999999999999999999999999999983 33 489999999


Q ss_pred             ccccC
Q psy17600         89 LCTGL   93 (351)
Q Consensus        89 la~~~   93 (351)
                      +....
T Consensus       169 ~t~k~  173 (378)
T KOG1345|consen  169 LTRKV  173 (378)
T ss_pred             ccccc
Confidence            97643

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.49  E-value=2.9e-13  Score=117.69  Aligned_cols=84  Identities=38%  Similarity=0.656  Sum_probs=75.4

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CCcEEEE
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIKLS   85 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~~~kl~   85 (351)
                      .+..+......|++|||+.|++|.+++... ..++...+..++.+++.++.+||+.|++|+||+|.||+++. ++.++|+
T Consensus        56 ~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~  135 (215)
T cd00180          56 LYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLA  135 (215)
T ss_pred             EeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEe
Confidence            344556668899999999999999999765 46889999999999999999999999999999999999998 8999999


Q ss_pred             ecCccc
Q psy17600         86 DFGLCT   91 (351)
Q Consensus        86 DFGla~   91 (351)
                      |||.+.
T Consensus       136 d~~~~~  141 (215)
T cd00180         136 DFGLSK  141 (215)
T ss_pred             cCCceE
Confidence            999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0199|consensus

Probab=99.49  E-value=4.1e-14  Score=141.18  Aligned_cols=90  Identities=27%  Similarity=0.344  Sum_probs=77.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+.+|..--+ ..+.||||++++|+|.+.|++  ...|.......|+.||+.|+.||.+++.|||||-..|+|+.....+
T Consensus       173 liRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtV  251 (1039)
T KOG0199|consen  173 LIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTV  251 (1039)
T ss_pred             eeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheeccccee
Confidence            3444544444 567799999999999999986  3567888889999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcC
Q psy17600         83 KLSDFGLCTGLKK   95 (351)
Q Consensus        83 kl~DFGla~~~~~   95 (351)
                      ||+||||.+.++.
T Consensus       252 KI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  252 KICDFGLMRALGE  264 (1039)
T ss_pred             eeecccceeccCC
Confidence            9999999876644

>KOG0590|consensus

Probab=99.46  E-value=5.3e-14  Score=144.10  Aligned_cols=73  Identities=29%  Similarity=0.580  Sum_probs=68.0

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .+-+||||++ ||+.++...+.+...++..++.|++.|+.|+|..||.|||+|++|+++..+|.+||+|||.+.
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~  468 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAAS  468 (601)
T ss_pred             chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcce
Confidence            3445999999 999999887789999999999999999999999999999999999999999999999999864

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.42  E-value=1.4e-12  Score=119.91  Aligned_cols=85  Identities=44%  Similarity=0.674  Sum_probs=75.2

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HI   82 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~   82 (351)
                      .....|++....|+++||+.++++...+....   .+.+..+..++.|++.++.|+|..+++|||+||+||+++..+ .+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~  141 (384)
T COG0515          62 KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVV  141 (384)
T ss_pred             eEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeE
Confidence            34445666677899999999999997776654   689999999999999999999999999999999999999988 79


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      +++|||+++
T Consensus       142 ~l~dfg~~~  150 (384)
T COG0515         142 KLIDFGLAK  150 (384)
T ss_pred             EEeccCcce
Confidence            999999975

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=5.3e-13  Score=128.88  Aligned_cols=72  Identities=21%  Similarity=0.346  Sum_probs=60.9

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCcEEecCCCcEEEEecCccccCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI-KPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDl-kp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ...|||||||+|++|.. +..   ..   ...++.|++.||.|||++||+|||| ||+|||++.++.++|+|||+|+.+.
T Consensus        91 ~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~  163 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR  163 (365)
T ss_pred             CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence            56899999999999963 211   11   1456789999999999999999999 9999999999999999999998654

>KOG0606|consensus

Probab=99.34  E-value=1.3e-12  Score=135.81  Aligned_cols=195  Identities=32%  Similarity=0.498  Sum_probs=154.0

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |--...+||||+|+.||+|...|++.+..+++-++.++..++.+.++||...++|||++|.|+++..+|+.++.|||+..
T Consensus       873 ~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~  952 (1205)
T KOG0606|consen  873 FPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLS  952 (1205)
T ss_pred             CCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccc
Confidence            44567899999999999999999998889999999999999999999999999999999999999999999999998432


Q ss_pred             cCcC------C---------------Cc-----------------cccc------ccCCCCCCcccC------------C
Q psy17600         92 GLKK------S---------------HR-----------------TDFY------RDLSQAKPSDFS------------Y  115 (351)
Q Consensus        92 ~~~~------~---------------~~-----------------~~~~------~~~~~~~~~~~~------------~  115 (351)
                      ...-      .               .+                 +.-|      ....+....+||            .
T Consensus       953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen  953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred             ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence            1100      0               00                 0000      011223344553            6


Q ss_pred             CCCCCCCHHHHHHHHHcCCCceeCCCC-CCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        116 PPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       116 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                      +||....++.++++|...  .+..|.. .-.++++++++.+++ .++.+|+|.. ++.+.+   .|+||++++|+.|...
T Consensus      1033 pp~na~tpq~~f~ni~~~--~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~-~~~e~k---~~~~~~~~~~~~l~~q 1106 (1205)
T KOG0606|consen 1033 PPFNAETPQQIFENILNR--DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK-GAAEVK---GHPFFQDVDWENLALQ 1106 (1205)
T ss_pred             CCCCCcchhhhhhccccC--CCCCCCCccccChhhhhhhhhhhccCchhccCcc-cccccc---cCCccCCCCccccccc
Confidence            899999999999999974  3444433 236899999999965 6888898864 445555   8999999999999999


Q ss_pred             CCCCCcccCCCCcCCCCCC
Q psy17600        194 PAAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       194 ~~~~~~~~~~~~d~~~f~~  212 (351)
                      ...+.+...+..|++.|..
T Consensus      1107 ~~~~~p~~~s~~dtS~~~~ 1125 (1205)
T KOG0606|consen 1107 KAEFVPQPESTQDTSYFES 1125 (1205)
T ss_pred             cCccCCCCCCCCccchhhc
Confidence            9999888888999999964

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.33  E-value=3.5e-12  Score=113.47  Aligned_cols=70  Identities=23%  Similarity=0.336  Sum_probs=59.4

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCCcEEecCCCcEEEEecCcccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI-KPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDl-kp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...|++|||+.|.+|...+..      . ...++.|++.++.++|++||+|||| ||+|||++.+|.++|+|||+|..
T Consensus        71 ~~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~  141 (218)
T PRK12274         71 DGRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVR  141 (218)
T ss_pred             cCEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence            457999999999999765421      1 1346778999999999999999999 79999999999999999999874

>KOG1025|consensus

Probab=99.32  E-value=6.6e-13  Score=134.69  Aligned_cols=77  Identities=23%  Similarity=0.478  Sum_probs=70.9

Q ss_pred             EEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         18 LYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      +-||++|+++|.|.++++.+ ..+..+....|..||+.|+.|||.++++||||-..|+|+..-.++|++|||+++.+.
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA  849 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence            67899999999999999854 568888889999999999999999999999999999999999999999999987654

>PRK10345 hypothetical protein; Provisional

Probab=99.31  E-value=6.9e-12  Score=112.44  Aligned_cols=86  Identities=12%  Similarity=0.052  Sum_probs=66.9

Q ss_pred             CceEeeeEEEecCC---cEE-EEEec--CCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeeccCCCCcEE
Q psy17600          3 DYACLKQLRMSDPI---NLY-LIMEF--LPGGDMMTLLMKKDTLSEECTQFYIAETALAI-DSIHKLGFIHRDIKPDNLL   75 (351)
Q Consensus         3 ~~~~~~~~~f~~~~---~ly-lVmEy--~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al-~~lH~~~iihrDlkp~Nil   75 (351)
                      .+++..+..+++..   .+| +||||  +.+|+|.+++.+ +.+++.  ..++.|++.++ +|||+++|+||||||+|||
T Consensus        61 ~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NIL  137 (210)
T PRK10345         61 SGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNIL  137 (210)
T ss_pred             cccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence            35666777888874   445 78999  668999999966 456666  35577888887 9999999999999999999


Q ss_pred             ecCC----CcEEEEecCccc
Q psy17600         76 LDAR----GHIKLSDFGLCT   91 (351)
Q Consensus        76 l~~~----~~~kl~DFGla~   91 (351)
                      ++..    +.++|+||+.+.
T Consensus       138 l~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        138 CQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             EeccCCCCCcEEEEECCCCc
Confidence            9743    379999955443

>smart00090 RIO RIO-like kinase

Probab=99.30  E-value=3.5e-12  Score=116.55  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=66.4

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG-FIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~-iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ..||||||+.|++|.........+....+..++.|++.++.++|..| |+|||+||+||+++ ++.++|+|||+|....
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            35899999999888776544455667777889999999999999999 99999999999999 8899999999987543

>KOG1164|consensus

Probab=99.27  E-value=2.1e-11  Score=116.32  Aligned_cols=79  Identities=29%  Similarity=0.496  Sum_probs=68.6

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-----CcEEEE
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-----GHIKLS   85 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-----~~~kl~   85 (351)
                      ++...-|+||+.+ |.+|.++....  +.++...+..++.|++.||+++|+.|+|||||||+|++++..     ..+.|.
T Consensus        91 ~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~ll  169 (322)
T KOG1164|consen   91 STEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLL  169 (322)
T ss_pred             CCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEE
Confidence            3566789999977 88999977543  578999999999999999999999999999999999999865     368999


Q ss_pred             ecCcccc
Q psy17600         86 DFGLCTG   92 (351)
Q Consensus        86 DFGla~~   92 (351)
                      |||+|+.
T Consensus       170 DfGlar~  176 (322)
T KOG1164|consen  170 DFGLARR  176 (322)
T ss_pred             ecCCCcc
Confidence            9999863

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.23  E-value=3.8e-11  Score=106.97  Aligned_cols=76  Identities=29%  Similarity=0.503  Sum_probs=66.5

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +.+....|+||||++|++|.+.+.....    ....++.+++.++.++|+.|++|+|++|.||+++ ++.++++|||++.
T Consensus        68 ~~~~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~  142 (211)
T PRK14879         68 FVDPENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAE  142 (211)
T ss_pred             EEeCCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCccc
Confidence            4466778999999999999999865332    6677888999999999999999999999999999 7899999999986


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       143 ~  143 (211)
T PRK14879        143 F  143 (211)
T ss_pred             C
Confidence            4

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.20  E-value=2.6e-11  Score=107.42  Aligned_cols=75  Identities=21%  Similarity=0.278  Sum_probs=63.3

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK   95 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~   95 (351)
                      ...++||||++|++|......      ..+..++.+++.++.++|..||+||||||+||+++.++.++|+|||+|.....
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            456999999999999765421      33556778999999999999999999999999999999999999999976554


Q ss_pred             C
Q psy17600         96 S   96 (351)
Q Consensus        96 ~   96 (351)
                      .
T Consensus       178 ~  178 (198)
T cd05144         178 P  178 (198)
T ss_pred             c
Confidence            3

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.20  E-value=4.6e-11  Score=105.53  Aligned_cols=72  Identities=25%  Similarity=0.494  Sum_probs=62.5

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+....++||||++|++|.+.+.....       .++.+++.++.++|+.|++|+|++|.||+++ ++.++++|||++..
T Consensus        67 ~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        67 VDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            355667999999999999988754321       6778999999999999999999999999999 89999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.19  E-value=5.9e-11  Score=108.60  Aligned_cols=69  Identities=32%  Similarity=0.469  Sum_probs=59.5

Q ss_pred             EEEEecCCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         19 YLIMEFLPG-GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        19 ylVmEy~~g-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ++||||++| .+|.+++.+ ..+++..    +.+++.++.+||++||+||||||+|||++.++.++|+|||.+..
T Consensus       122 ~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        122 DILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             eEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            599999998 689888754 4566553    46788999999999999999999999999999999999999754

>KOG1033|consensus

Probab=99.19  E-value=3.5e-12  Score=124.49  Aligned_cols=76  Identities=29%  Similarity=0.476  Sum_probs=64.8

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ...+||.|++|...+|.++|.....   .+......++.|+..|++|   ++.+|||+||.||....+..+||.|||+..
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t  404 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT  404 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence            3468999999999999999975433   3455667788899999999   999999999999999999999999999975


Q ss_pred             cC
Q psy17600         92 GL   93 (351)
Q Consensus        92 ~~   93 (351)
                      ..
T Consensus       405 s~  406 (516)
T KOG1033|consen  405 SQ  406 (516)
T ss_pred             ec
Confidence            43

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.15  E-value=8.8e-11  Score=119.68  Aligned_cols=74  Identities=24%  Similarity=0.434  Sum_probs=64.3

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      ...+....|+||||++|++|.+++.        ....++.+++.++.++|+.|++|||+||+|||+ .++.++|+|||++
T Consensus       404 ~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        404 YDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             EEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence            3445567899999999999999885        346678899999999999999999999999999 6789999999998


Q ss_pred             ccC
Q psy17600         91 TGL   93 (351)
Q Consensus        91 ~~~   93 (351)
                      +..
T Consensus       475 ~~~  477 (535)
T PRK09605        475 KYS  477 (535)
T ss_pred             ccC
Confidence            753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.14  E-value=9.3e-11  Score=106.11  Aligned_cols=71  Identities=18%  Similarity=0.396  Sum_probs=59.5

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ....||||||++|.+|.+..    .+++.    ...+++.++..+|..|++|||+||.|++++.+| ++++|||......
T Consensus       115 ~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~  185 (232)
T PRK10359        115 AHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTA  185 (232)
T ss_pred             cCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCccccc
Confidence            34689999999999998763    23332    345889999999999999999999999999988 9999999876553

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.07  E-value=1.6e-10  Score=100.87  Aligned_cols=77  Identities=21%  Similarity=0.342  Sum_probs=60.1

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcEEEEecCccccCcC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK   95 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~   95 (351)
                      ..++||||++|+.+........... ..++.++.+++.++.++|. .+|+||||||+||+++ ++.++++|||.+.....
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence            4589999999964432111111111 5677888999999999999 9999999999999999 89999999999875543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1024|consensus

Probab=99.06  E-value=4.5e-10  Score=106.28  Aligned_cols=83  Identities=23%  Similarity=0.382  Sum_probs=69.4

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKK--------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~--------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.++...-+.++-+..-|+|..+|...        ..+...+....+.|+..|++|+|+.||||.||-..|.+|++.-.+
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqV  435 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQV  435 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeE
Confidence            345566667888888889999999722        245666777788999999999999999999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|-.+++.+
T Consensus       436 kltDsaLSRDL  446 (563)
T KOG1024|consen  436 KLTDSALSRDL  446 (563)
T ss_pred             Eeccchhcccc
Confidence            99998887643

>KOG1166|consensus

Probab=99.01  E-value=6.8e-10  Score=117.34  Aligned_cols=78  Identities=29%  Similarity=0.541  Sum_probs=69.8

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-------CCcEEEEecC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-------RGHIKLSDFG   88 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-------~~~~kl~DFG   88 (351)
                      +.-+||+||.+.|+|.++++..+.+++..+.+++.|++.-+++||..+|||.||||+|.||..       ..-++|+|||
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG  846 (974)
T ss_pred             CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence            446899999999999999998888999999999999999999999999999999999999953       2358999999


Q ss_pred             ccccC
Q psy17600         89 LCTGL   93 (351)
Q Consensus        89 la~~~   93 (351)
                      .+..+
T Consensus       847 ~siDm  851 (974)
T KOG1166|consen  847 RSIDM  851 (974)
T ss_pred             cceee
Confidence            87544

>KOG0605|consensus

Probab=98.99  E-value=9.5e-11  Score=114.56  Aligned_cols=61  Identities=64%  Similarity=1.211  Sum_probs=53.9

Q ss_pred             CCccccccccccccccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        262 MDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ++.+.....++++|+....+.+|||.|+|||++++.+|+..+||||+|||+||||++=-+|
T Consensus       328 ~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF  388 (550)
T KOG0605|consen  328 MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPF  388 (550)
T ss_pred             hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            3345556789999999999999999999999999999999999999999999999775555

>KOG1165|consensus

Probab=98.98  E-value=1.3e-09  Score=101.29  Aligned_cols=74  Identities=28%  Similarity=0.499  Sum_probs=64.4

Q ss_pred             EEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-----cEEEEecCcccc
Q psy17600         19 YLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-----HIKLSDFGLCTG   92 (351)
Q Consensus        19 ylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-----~~kl~DFGla~~   92 (351)
                      .||||++ |-+|.++..-. ..|+...+..++.|++.-++++|.+..|+|||||+|+||+.-+     .+.++|||+|+.
T Consensus       100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            4899977 78888888755 4699999999999999999999999999999999999997544     578999999975


Q ss_pred             C
Q psy17600         93 L   93 (351)
Q Consensus        93 ~   93 (351)
                      .
T Consensus       179 Y  179 (449)
T KOG1165|consen  179 Y  179 (449)
T ss_pred             h
Confidence            3

>KOG1163|consensus

Probab=98.96  E-value=1.5e-09  Score=97.09  Aligned_cols=81  Identities=28%  Similarity=0.444  Sum_probs=67.0

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---CcEEEEec
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---GHIKLSDF   87 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~~~kl~DF   87 (351)
                      ++....=.+|||.+ |.+|.++..- ...++-..+.-++-|++..++|+|.+++|||||||+|+|.+-.   ..+-++||
T Consensus        80 ~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDF  158 (341)
T KOG1163|consen   80 GTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDF  158 (341)
T ss_pred             ccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEec
Confidence            34445557999977 7889888763 3568888888899999999999999999999999999998643   46789999


Q ss_pred             CccccC
Q psy17600         88 GLCTGL   93 (351)
Q Consensus        88 Gla~~~   93 (351)
                      |+|+..
T Consensus       159 GLaKky  164 (341)
T KOG1163|consen  159 GLAKKY  164 (341)
T ss_pred             cchhhh
Confidence            999854

>KOG1240|consensus

Probab=98.95  E-value=3.1e-10  Score=118.80  Aligned_cols=73  Identities=25%  Similarity=0.397  Sum_probs=63.9

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      ..-|||=+|+. .+|+++|.-+..+..-+.+.++.|++.|+.-||..||+|+|||.||||++.=.++-|+||.-
T Consensus        94 kAAylvRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAs  166 (1431)
T KOG1240|consen   94 KAAYLVRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFAS  166 (1431)
T ss_pred             HHHHHHHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccc
Confidence            34477777875 58999997777777888899999999999999999999999999999999989999999875

>KOG4158|consensus

Probab=98.93  E-value=7.9e-09  Score=98.26  Aligned_cols=75  Identities=33%  Similarity=0.557  Sum_probs=62.7

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe--cCCC--cEEEEecCcc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL--DARG--HIKLSDFGLC   90 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill--~~~~--~~kl~DFGla   90 (351)
                      ...+|+||.-.. .+|..++-. ...+....+.+++|+++|+.|||++||.|||+|.+|||+  +.++  .+.++|||+|
T Consensus       315 ~~tlylvMkrY~-~tLr~yl~~-~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  315 PKTLYLVMKRYR-QTLREYLWT-RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             CceEEEehhcch-hhHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence            456899998664 578888754 457778888899999999999999999999999999998  4444  5788999998


Q ss_pred             c
Q psy17600         91 T   91 (351)
Q Consensus        91 ~   91 (351)
                      -
T Consensus       393 L  393 (598)
T KOG4158|consen  393 L  393 (598)
T ss_pred             e
Confidence            5

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.84  E-value=6.9e-09  Score=85.85  Aligned_cols=76  Identities=24%  Similarity=0.330  Sum_probs=62.6

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCCCCcEEecCCCcEEEEe
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL---GFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      ..+.+....|++|||+.|+.+..+       +......+..++..++.++|..   +++|+|++|.||+++..+.++++|
T Consensus        60 ~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~D  132 (155)
T cd05120          60 ASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIID  132 (155)
T ss_pred             EEcCCCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEe
Confidence            344455679999999999877654       4455566778899999999984   799999999999999989999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||.+..
T Consensus       133 f~~~~~  138 (155)
T cd05120         133 WEYAGY  138 (155)
T ss_pred             cccccC
Confidence            999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0590|consensus

Probab=98.79  E-value=1.1e-09  Score=112.51  Aligned_cols=81  Identities=32%  Similarity=0.587  Sum_probs=72.5

Q ss_pred             EecCCcEEEEEecCCCCCHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEecCCC-cEEEEec
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLL-MKKD-TLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARG-HIKLSDF   87 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l-~~~~-~l~e~~~~~~~~qi~~al~~lH-~~~iihrDlkp~Nill~~~~-~~kl~DF   87 (351)
                      ..++...|+++||..||+++..+ .... ..+...+.+|+.|+..++.|+| ..++.|||+||+|.+++..+ .+++.||
T Consensus        90 ~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df  169 (601)
T KOG0590|consen   90 SSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADF  169 (601)
T ss_pred             cCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCc
Confidence            34567789999999999999988 5554 6788889999999999999999 99999999999999999999 9999999


Q ss_pred             Ccccc
Q psy17600         88 GLCTG   92 (351)
Q Consensus        88 Gla~~   92 (351)
                      |+|..
T Consensus       170 ~~At~  174 (601)
T KOG0590|consen  170 GLATA  174 (601)
T ss_pred             hhhcc
Confidence            99854

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.79  E-value=1.2e-08  Score=90.41  Aligned_cols=78  Identities=15%  Similarity=0.241  Sum_probs=60.4

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSI-HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~l-H~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      .+-+|||||+.++.+..-..+...++++....+..+++.++..+ |..|+||+||++.||++. ++.+.++|||.+-...
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            44579999998765533222333466666677778999999988 899999999999999996 5789999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.64  E-value=5.7e-08  Score=96.55  Aligned_cols=76  Identities=24%  Similarity=0.408  Sum_probs=57.4

Q ss_pred             cEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~-al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      .-+|||||++|++|.+..... .....   ..++..++. .+..+|..|++|+|+||.||+++.+|.++++|||++..+.
T Consensus       232 ~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       232 ERVLTMEWIDGIPLSDIAALDEAGLDR---KALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CceEEEEeECCcccccHHHHHhcCCCH---HHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            357999999999998876432 12221   223333333 4677899999999999999999999999999999987765


Q ss_pred             C
Q psy17600         95 K   95 (351)
Q Consensus        95 ~   95 (351)
                      .
T Consensus       309 ~  309 (437)
T TIGR01982       309 E  309 (437)
T ss_pred             H
Confidence            3

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0598|consensus

Probab=98.60  E-value=1.5e-08  Score=95.41  Aligned_cols=44  Identities=50%  Similarity=1.087  Sum_probs=40.5

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .++|||+.|||||++.+.+|+..+||||+|+++|+|+.+--+|.
T Consensus       183 ~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~  226 (357)
T KOG0598|consen  183 RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFY  226 (357)
T ss_pred             ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCc
Confidence            45799999999999999999999999999999999999888874

>KOG0694|consensus

Probab=98.57  E-value=1.7e-08  Score=101.45  Aligned_cols=49  Identities=41%  Similarity=0.870  Sum_probs=44.9

Q ss_pred             ccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        276 RALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       276 ~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ..+.+++||||.|+|||++.+..|+.++||||+||++|||+.+..+|.+
T Consensus       522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g  570 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG  570 (694)
T ss_pred             CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence            3466789999999999999999999999999999999999999998863

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.57  E-value=2.6e-07  Score=80.19  Aligned_cols=75  Identities=27%  Similarity=0.425  Sum_probs=61.0

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +.+-|+.+-.|+|||++|-.|.+.+...       .-.++..+..-+.-||..||||.||.+.||++...+ +-++||||
T Consensus        66 v~dvD~~~~~I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGL  137 (204)
T COG3642          66 VYDVDPDNGLIVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGL  137 (204)
T ss_pred             EEEEcCCCCEEEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCc
Confidence            3456788888999999998888888654       134455666777889999999999999999997655 89999999


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      +..
T Consensus       138 g~~  140 (204)
T COG3642         138 GEF  140 (204)
T ss_pred             ccc
Confidence            863

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.57  E-value=1.1e-07  Score=81.35  Aligned_cols=67  Identities=28%  Similarity=0.465  Sum_probs=53.6

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGF-----IHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~i-----ihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .-++||||++|.++...    . .   ....+..+++.++..||..++     +|+|++|.||+++ ++.++++|||.+.
T Consensus        65 ~~~lv~e~i~G~~l~~~----~-~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          65 TGVLITEFIEGSELLTE----D-F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             CCeEEEEecCCCccccc----c-c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            45899999999887643    0 1   112345688899999999985     9999999999998 6789999999975


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       136 ~  136 (170)
T cd05151         136 M  136 (170)
T ss_pred             C
Confidence            3

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.56  E-value=2.9e-07  Score=85.62  Aligned_cols=76  Identities=17%  Similarity=0.214  Sum_probs=63.7

Q ss_pred             CcEEEEEecCCCC-CHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-------CCcEEEE
Q psy17600         16 INLYLIMEFLPGG-DMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-------RGHIKLS   85 (351)
Q Consensus        16 ~~lylVmEy~~gg-~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-------~~~~kl~   85 (351)
                      ..-|||||+++|- +|.+++..  ....++.....++.++...+.-||..||+|+|+++.|||++.       ++.+.++
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI  187 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVI  187 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEE
Confidence            3578999999986 78888753  234566677788889999999999999999999999999975       4578999


Q ss_pred             ecCccc
Q psy17600         86 DFGLCT   91 (351)
Q Consensus        86 DFGla~   91 (351)
                      ||+.+.
T Consensus       188 Dl~r~~  193 (268)
T PRK15123        188 DLHRAQ  193 (268)
T ss_pred             ECCccc
Confidence            999875

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.53  E-value=1.1e-07  Score=96.34  Aligned_cols=72  Identities=24%  Similarity=0.431  Sum_probs=54.1

Q ss_pred             EEEEEecCCCCCHHHH--HHhCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC----cEEEEec
Q psy17600         18 LYLIMEFLPGGDMMTL--LMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDF   87 (351)
Q Consensus        18 lylVmEy~~gg~L~~~--l~~~~----~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~----~~kl~DF   87 (351)
                      -+||||||.|+++.+.  +...+    .+.+..+..++.|+       +..|++|+|+||.||+++.+|    .++++||
T Consensus       236 ~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDF  308 (537)
T PRK04750        236 TVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDF  308 (537)
T ss_pred             ceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEec
Confidence            3599999999999764  33333    23344444444444       468999999999999999888    9999999


Q ss_pred             CccccCcCC
Q psy17600         88 GLCTGLKKS   96 (351)
Q Consensus        88 Gla~~~~~~   96 (351)
                      |++..+...
T Consensus       309 Givg~l~~~  317 (537)
T PRK04750        309 GIVGSLNKE  317 (537)
T ss_pred             ceEEECCHH
Confidence            998876543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.52  E-value=4.9e-08  Score=91.09  Aligned_cols=74  Identities=28%  Similarity=0.507  Sum_probs=49.9

Q ss_pred             cEEEEEecCCCCCHHHHHH---hCCCC---CHHHHHH-HHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         17 NLYLIMEFLPGGDMMTLLM---KKDTL---SEECTQF-YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~---~~~~l---~e~~~~~-~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +.+++|.-+ .+||..++.   .....   ....++. +..|++..++++|+.|++|.||||+|++++.+|.+.|+||+.
T Consensus       113 n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~  191 (288)
T PF14531_consen  113 NRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSS  191 (288)
T ss_dssp             SEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGG
T ss_pred             hhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHH
Confidence            457778766 468877653   22222   1223333 447999999999999999999999999999999999999987


Q ss_pred             cc
Q psy17600         90 CT   91 (351)
Q Consensus        90 a~   91 (351)
                      ..
T Consensus       192 ~~  193 (288)
T PF14531_consen  192 LV  193 (288)
T ss_dssp             EE
T ss_pred             He
Confidence            53

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.52  E-value=3.5e-07  Score=81.79  Aligned_cols=76  Identities=30%  Similarity=0.454  Sum_probs=66.3

Q ss_pred             cEEEEEecCCCC-CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---cEEEEecCcccc
Q psy17600         17 NLYLIMEFLPGG-DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---HIKLSDFGLCTG   92 (351)
Q Consensus        17 ~lylVmEy~~gg-~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---~~kl~DFGla~~   92 (351)
                      .-|||+|+++|- +|.+++......+......++.++...+.-||..||+|+|+++.|||++.++   .+.++||+.++.
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            458999999984 8999987655577777888889999999999999999999999999999887   889999998764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0610|consensus

Probab=98.47  E-value=6.8e-08  Score=92.27  Aligned_cols=52  Identities=42%  Similarity=0.797  Sum_probs=46.1

Q ss_pred             ccccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccccC
Q psy17600        274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT  325 (351)
Q Consensus       274 ~~~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~~  325 (351)
                      ...++..++|||-+|+|||++.+.++|.++|||++|+++|||+.+--+|.+.
T Consensus       287 p~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~  338 (459)
T KOG0610|consen  287 PTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGS  338 (459)
T ss_pred             CCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCC
Confidence            3445667899999999999999999999999999999999999999888543

>KOG0616|consensus

Probab=98.45  E-value=5.1e-08  Score=89.58  Aligned_cols=44  Identities=48%  Similarity=1.078  Sum_probs=40.3

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+.||||.|+|||+++.++|+.++||||+||++|||+.+--+|
T Consensus       198 T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF  241 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPF  241 (355)
T ss_pred             EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence            45789999999999999999999999999999999999876666

>KOG1023|consensus

Probab=98.43  E-value=1.2e-06  Score=86.98  Aligned_cols=79  Identities=25%  Similarity=0.407  Sum_probs=68.9

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGF-IHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~i-ihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      -+...++.|-+||.-|+|.+.+.. ...++..-...++..++.|+.|+|...| .|..|+..|.+++....+||+|||+.
T Consensus        17 ~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~   96 (484)
T KOG1023|consen   17 VDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLN   96 (484)
T ss_pred             ecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhc
Confidence            355788999999999999999976 3456666677788999999999998876 99999999999999999999999995


Q ss_pred             c
Q psy17600         91 T   91 (351)
Q Consensus        91 ~   91 (351)
                      .
T Consensus        97 ~   97 (484)
T KOG1023|consen   97 S   97 (484)
T ss_pred             c
Confidence            4

>KOG3087|consensus

Probab=98.35  E-value=1.8e-06  Score=74.96  Aligned_cols=82  Identities=26%  Similarity=0.385  Sum_probs=63.6

Q ss_pred             EEEecCCcEEEEEecCCC-CCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---cEE
Q psy17600         10 LRMSDPINLYLIMEFLPG-GDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---HIK   83 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~g-g~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---~~k   83 (351)
                      +.|.|..+=.|+|||++| -++.+++.....  ...+....++..|...+.-||.+++||.||..+||++..++   .+-
T Consensus        77 l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~  156 (229)
T KOG3087|consen   77 LIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPI  156 (229)
T ss_pred             EEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceE
Confidence            457788888999999987 467777764322  22223356778888889999999999999999999997665   457


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      ++|||++.
T Consensus       157 lIdfgls~  164 (229)
T KOG3087|consen  157 LIDFGLSS  164 (229)
T ss_pred             EEeecchh
Confidence            99999975

>KOG0612|consensus

Probab=98.31  E-value=2.7e-07  Score=97.49  Aligned_cols=44  Identities=57%  Similarity=1.087  Sum_probs=27.1

Q ss_pred             cccCcCCCCcccccccccC-----CCCCCCcccccchhhhhhhhcCccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQT-----GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~-----~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ....||||.|++||++...     .||.-+||||+||++|||+.+--+|
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF  281 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF  281 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence            3456899999999998743     3444455555555555555444444

>KOG0986|consensus

Probab=98.27  E-value=3.1e-07  Score=88.76  Aligned_cols=45  Identities=40%  Similarity=0.741  Sum_probs=41.5

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+.+||.+|||||++.+..|+..+||||+||++|+|+.+..+|.
T Consensus       343 ~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr  387 (591)
T KOG0986|consen  343 IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR  387 (591)
T ss_pred             cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence            345699999999999999999999999999999999999999995

>KOG0696|consensus

Probab=98.18  E-value=7.1e-07  Score=85.44  Aligned_cols=49  Identities=43%  Similarity=0.874  Sum_probs=43.7

Q ss_pred             cccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccccC
Q psy17600        277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT  325 (351)
Q Consensus       277 ~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~~  325 (351)
                      ....++||||.|+|||++.-.+|+..+||||+||++|||+.++-+|.+-
T Consensus       505 ~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe  553 (683)
T KOG0696|consen  505 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE  553 (683)
T ss_pred             cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence            4556789999999999999999999999999999999999998888543

>KOG0575|consensus

Probab=98.16  E-value=7.5e-07  Score=88.80  Aligned_cols=44  Identities=43%  Similarity=0.798  Sum_probs=40.1

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.||||.|+|||++...+++.-+|+||+||++|.||.+.=+|.
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe  219 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE  219 (592)
T ss_pred             ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc
Confidence            47899999999999999999999999999999999998776664

>KOG0695|consensus

Probab=98.05  E-value=1.5e-06  Score=81.27  Aligned_cols=50  Identities=42%  Similarity=0.863  Sum_probs=43.9

Q ss_pred             cccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccccCC
Q psy17600        277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG  326 (351)
Q Consensus       277 ~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~~~  326 (351)
                      ....++||||.|+|||++.+..||..+|||++||+++||+.+..+|--.|
T Consensus       406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivg  455 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVG  455 (593)
T ss_pred             cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence            35567899999999999999999999999999999999999888886333

>KOG0690|consensus

Probab=98.04  E-value=2.1e-06  Score=80.07  Aligned_cols=49  Identities=43%  Similarity=0.895  Sum_probs=40.4

Q ss_pred             ccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        276 RALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       276 ~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      .+...++||||.|+|||++-...||.++|||.+||++|||+.+.=+|-.
T Consensus       322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn  370 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN  370 (516)
T ss_pred             cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence            3455678999999999999888888888888888888888877666643

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.99  E-value=3.2e-06  Score=81.56  Aligned_cols=56  Identities=79%  Similarity=1.353  Sum_probs=45.5

Q ss_pred             ccccccccccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        268 AESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       268 ~~~~~~~~~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..++...++....+.+||+.|+|||++....++.++|+||+||++|+|+.+.-+|.
T Consensus       185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         185 AETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence            33444555555567799999999999988889999999999999999998766653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.98  E-value=4.5e-06  Score=73.54  Aligned_cols=72  Identities=29%  Similarity=0.453  Sum_probs=47.5

Q ss_pred             EEEEecCC--CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         19 YLIMEFLP--GGDMMTLLMKKDTLSEECTQFYIAETALAIDS-IHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        19 ylVmEy~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~-lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      .|||||+.  |..+..+. ... ++.+....+..+++..+.. +|..|+||.||.+.||+++.+ .+.++|||.+...
T Consensus        82 ~ivME~I~~~G~~~~~l~-~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen   82 VIVMEYIGEDGVPLPRLK-DVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             EEEEE--EETTEEGGCHH-HCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             EEEEEecCCCccchhhHH-hcc-ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence            59999998  65554433 221 2233445566677775544 579999999999999999877 8999999987543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0608|consensus

Probab=97.98  E-value=2.4e-06  Score=85.69  Aligned_cols=52  Identities=58%  Similarity=1.088  Sum_probs=46.8

Q ss_pred             ccccccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       272 ~~~~~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ++.+|-...+++||+.|+|||++...+++..+||||.|||+|+|+.+.-+|+
T Consensus       821 ~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~  872 (1034)
T KOG0608|consen  821 RQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFL  872 (1034)
T ss_pred             hhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCcc
Confidence            3345566778899999999999999999999999999999999999999997

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=97.96  E-value=3.3e-06  Score=81.65  Aligned_cols=49  Identities=76%  Similarity=1.287  Sum_probs=41.8

Q ss_pred             cccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        275 RRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       275 ~~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.......+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       189 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         189 RRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             cccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence            3334456789999999999998889999999999999999998877764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0614|consensus

Probab=97.95  E-value=2.7e-06  Score=83.43  Aligned_cols=47  Identities=38%  Similarity=0.890  Sum_probs=43.0

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccccCC
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG  326 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~~~  326 (351)
                      -++||||+|.|||+++.+++..++|.||+|+.+|||+.+.-+|.+.+
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d  623 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD  623 (732)
T ss_pred             eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc
Confidence            46799999999999999999999999999999999999988886554

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=97.93  E-value=3.6e-06  Score=81.24  Aligned_cols=53  Identities=79%  Similarity=1.359  Sum_probs=43.5

Q ss_pred             cccccccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        271 WKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       271 ~~~~~~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +..++.....+.+||+.|+|||++.+..++.++|+||+||++|+|+.+-.+|.
T Consensus       185 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~  237 (360)
T cd05627         185 WKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (360)
T ss_pred             ccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence            33344444556789999999999998889999999999999999998766663

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0592|consensus

Probab=97.90  E-value=4.1e-06  Score=82.74  Aligned_cols=45  Identities=40%  Similarity=0.803  Sum_probs=41.6

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..++|||-.|.+||++.....+..+|+|+||||+|+|+.+.=+|.
T Consensus       244 ~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr  288 (604)
T KOG0592|consen  244 RSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR  288 (604)
T ss_pred             ccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence            357999999999999999999999999999999999999888775

>KOG4717|consensus

Probab=97.86  E-value=6.5e-06  Score=80.97  Aligned_cols=45  Identities=40%  Similarity=0.775  Sum_probs=34.2

Q ss_pred             cccCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+.||+..|.|||++++..| .+++|+||+|||+|-|+.+.-+|.
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFq  220 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQ  220 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccc
Confidence            356799999999999998776 446777777777777776665554

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.85  E-value=5.1e-05  Score=68.14  Aligned_cols=68  Identities=28%  Similarity=0.471  Sum_probs=52.3

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...+|+|||++|..|.+..    .+++.    +...+..++.-+|..|+.|.|..|.|++++.++ ++++||+..+.
T Consensus       116 ~~~~ll~EYIeG~~l~d~~----~i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~~k~~  183 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIE----DIDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQGKRM  183 (229)
T ss_pred             eEEEEEEEEecCeecccch----hcCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECccccc
Confidence            3456899999998886653    23333    224566678999999999999999999998555 99999987543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.81  E-value=7.4e-06  Score=70.36  Aligned_cols=40  Identities=35%  Similarity=0.542  Sum_probs=35.3

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      .||+.|+|||++.+..++.++|+||+||++|+|+...-++
T Consensus        65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~  104 (176)
T smart00750       65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPY  104 (176)
T ss_pred             CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCc
Confidence            5899999999999888999999999999999998665544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0667|consensus

Probab=97.80  E-value=7.2e-06  Score=82.46  Aligned_cols=42  Identities=38%  Similarity=0.638  Sum_probs=35.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+-+..|.|||++++.+|+.+.|+||||||++||+.+ +++.
T Consensus       347 tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLf  388 (586)
T KOG0667|consen  347 TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLF  388 (586)
T ss_pred             eeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-cccc
Confidence            55778889999999999999999999999999999977 5553

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=97.80  E-value=9.6e-06  Score=78.89  Aligned_cols=44  Identities=64%  Similarity=1.195  Sum_probs=39.8

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       206 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~  249 (382)
T cd05625         206 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL  249 (382)
T ss_pred             cccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCC
Confidence            45689999999999998889999999999999999998877774

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.76  E-value=3.8e-05  Score=68.21  Aligned_cols=74  Identities=23%  Similarity=0.365  Sum_probs=51.8

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-----------------------------------   61 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-----------------------------------   61 (351)
                      ..|+||||++|+++...+.. ..+++.....++.+++.++..+|+                                   
T Consensus        74 ~~~~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (223)
T cd05154          74 TPFYVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD  152 (223)
T ss_pred             CceEEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc
Confidence            56899999999877664421 234444444444455555544442                                   


Q ss_pred             ---------------------CCCeeccCCCCcEEecC--CCcEEEEecCccc
Q psy17600         62 ---------------------LGFIHRDIKPDNLLLDA--RGHIKLSDFGLCT   91 (351)
Q Consensus        62 ---------------------~~iihrDlkp~Nill~~--~~~~kl~DFGla~   91 (351)
                                           ..++|+|++|.||+++.  ++.+.++||+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         153 EPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             ccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                                 34699999999999988  5678999999875

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.75  E-value=1.1e-05  Score=78.31  Aligned_cols=44  Identities=73%  Similarity=1.312  Sum_probs=38.9

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+.+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|
T Consensus       205 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf  248 (377)
T cd05629         205 AYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPF  248 (377)
T ss_pred             ccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCC
Confidence            34568999999999998888999999999999999999876665

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0583|consensus

Probab=97.73  E-value=1.4e-05  Score=77.73  Aligned_cols=46  Identities=50%  Similarity=0.815  Sum_probs=39.6

Q ss_pred             ccccCcCCCCcccccccccCC-C-CCCCcccccchhhhhhhhcCcccc
Q psy17600        278 LAYSTVGTPDYIAPEVFLQTG-Y-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       278 ~~~~~~Gt~~y~aPe~~~~~~-~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+.+|||.|+|||++.+.. | |.++|+||+||++|.|+.+-=+|.
T Consensus       177 ~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~  224 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD  224 (370)
T ss_pred             cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence            456789999999999999876 6 678999999999999998876664

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=97.72  E-value=1.5e-05  Score=77.58  Aligned_cols=44  Identities=59%  Similarity=1.156  Sum_probs=39.6

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       206 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  249 (381)
T cd05626         206 HSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFL  249 (381)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCc
Confidence            45689999999999988889999999999999999998877764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0591|consensus

Probab=97.72  E-value=9e-06  Score=74.64  Aligned_cols=48  Identities=42%  Similarity=0.752  Sum_probs=43.7

Q ss_pred             ccccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        276 RALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       276 ~~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .....+.+|||+||+||++.+.+|+.++|+||+||++|||.+-..+|.
T Consensus       182 ~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~  229 (375)
T KOG0591|consen  182 TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFY  229 (375)
T ss_pred             hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcc
Confidence            345678899999999999999999999999999999999999888884

>KOG0033|consensus

Probab=97.72  E-value=1.7e-05  Score=71.58  Aligned_cols=47  Identities=34%  Similarity=0.660  Sum_probs=42.7

Q ss_pred             ccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       278 ~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ....++|||.|||||++...+|+..+|+|+-|||+|.|+.+-=+|+.
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~  214 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  214 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence            44577999999999999999999999999999999999988877764

>KOG0615|consensus

Probab=97.70  E-value=8.6e-06  Score=78.10  Aligned_cols=47  Identities=36%  Similarity=0.709  Sum_probs=38.2

Q ss_pred             cccccCcCCCCcccccccccCC---CCCCCcccccchhhhhhhhcCcccc
Q psy17600        277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       277 ~~~~~~~Gt~~y~aPe~~~~~~---~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +...++||||.|.|||++.+.+   +..++|+||+||++|-++-+-=+|.
T Consensus       333 sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS  382 (475)
T KOG0615|consen  333 SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFS  382 (475)
T ss_pred             eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcc
Confidence            3456789999999999999765   3457899999999999987766653

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=97.68  E-value=1.4e-05  Score=77.42  Aligned_cols=44  Identities=64%  Similarity=1.195  Sum_probs=39.5

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       202 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  245 (376)
T cd05598         202 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL  245 (376)
T ss_pred             cccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCC
Confidence            35689999999999998889999999999999999998877774

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.65  E-value=0.0002  Score=75.25  Aligned_cols=138  Identities=22%  Similarity=0.424  Sum_probs=93.2

Q ss_pred             eeccCCCC-cEEecCCCcEEEEecCccccCcCCCc---------ccccccCC------CCCCccc------------CCC
Q psy17600         65 IHRDIKPD-NLLLDARGHIKLSDFGLCTGLKKSHR---------TDFYRDLS------QAKPSDF------------SYP  116 (351)
Q Consensus        65 ihrDlkp~-Nill~~~~~~kl~DFGla~~~~~~~~---------~~~~~~~~------~~~~~~~------------~~~  116 (351)
                      .+++..|. |++++..+..++.|||.++.......         +..|..+.      +....|+            +.+
T Consensus       499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~  578 (669)
T cd05610         499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIP  578 (669)
T ss_pred             CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            34555665 56667777778889998876433221         22232221      2222332            268


Q ss_pred             CCCCCCHHHHHHHHHcCCCceeCCCC-CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCC
Q psy17600        117 PFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERP  194 (351)
Q Consensus       117 Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~  194 (351)
                      ||.+.+..+.+..++..  .+.+|.. ..++.++.+++.++ ..+|.+|..    +.++.   .||||+.++|..+....
T Consensus       579 pf~~~~~~~~~~~il~~--~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~t----a~e~l---~h~~~~~~~~~~~~~~~  649 (669)
T cd05610         579 PFNDETPQQVFQNILNR--DIPWPEGEEKLSVNAQNAIEILLTMDPTKRAG----LKELK---QHPLFHGVDWENLQNQT  649 (669)
T ss_pred             CCCCCCHHHHHHHHHhc--CCCCCcccccCCHHHHHHHHHHcccChhHCcC----HHHHH---hCHhhcCCCHHHhcccC
Confidence            99999999999888763  2334432 24678899999995 479999986    56776   89999999999999888


Q ss_pred             CCCCcccCCCCcCCCCC
Q psy17600        195 AAIPVQVKSIDDTSNFD  211 (351)
Q Consensus       195 ~~~~~~~~~~~d~~~f~  211 (351)
                      .++.+......|...|+
T Consensus       650 ~~~~~~~~~~~~~~~~~  666 (669)
T cd05610         650 MPFIPQPDDETDTSYFE  666 (669)
T ss_pred             CCCCCCCCCcccccccc
Confidence            77777666666666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0032|consensus

Probab=97.61  E-value=2.8e-05  Score=75.94  Aligned_cols=46  Identities=43%  Similarity=0.764  Sum_probs=41.4

Q ss_pred             ccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       278 ~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .....+|||+|+|||++....|+..+|+||+|+++|.|+.+-.+|+
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~  239 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFW  239 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCc
Confidence            3456799999999999998899999999999999999998877775

>KOG0589|consensus

Probab=97.58  E-value=2.4e-05  Score=76.53  Aligned_cols=45  Identities=42%  Similarity=0.781  Sum_probs=36.4

Q ss_pred             ccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       278 ~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+.+|||+|++||.+.+.+|+.++|+||+||++|||..-.-+|
T Consensus       162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF  206 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAF  206 (426)
T ss_pred             hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccccc
Confidence            456789999999999999888888888888888888877555554

>KOG4721|consensus

Probab=97.58  E-value=2.5e-05  Score=77.78  Aligned_cols=60  Identities=30%  Similarity=0.552  Sum_probs=47.8

Q ss_pred             cccccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccccCCCCCcccchhhhH
Q psy17600        277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGV  338 (351)
Q Consensus       277 ~~~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~~~~~~~~~~~~~g~  338 (351)
                      +...+++||..|||||++....++.|+|||||||+++|||..--+|...+  -.+=||++|-
T Consensus       266 STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd--ssAIIwGVGs  325 (904)
T KOG4721|consen  266 STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD--SSAIIWGVGS  325 (904)
T ss_pred             hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc--hheeEEeccC
Confidence            44568899999999999999999999999999999999997655552221  2234898884

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=97.57  E-value=3.8e-05  Score=72.90  Aligned_cols=43  Identities=49%  Similarity=1.038  Sum_probs=38.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~  202 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE  202 (323)
T ss_pred             cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCC
Confidence            4579999999999998889999999999999999998776664

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=97.55  E-value=3.9e-05  Score=72.86  Aligned_cols=43  Identities=51%  Similarity=1.063  Sum_probs=38.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  196 (323)
T cd05571         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY  196 (323)
T ss_pred             ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCC
Confidence            4579999999999988889999999999999999998766663

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PRK09902 hypothetical protein; Provisional

Probab=97.55  E-value=0.00041  Score=62.07  Aligned_cols=75  Identities=17%  Similarity=0.238  Sum_probs=61.7

Q ss_pred             cEEEEEecCCC-CCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc--EEEEecCccc
Q psy17600         17 NLYLIMEFLPG-GDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH--IKLSDFGLCT   91 (351)
Q Consensus        17 ~lylVmEy~~g-g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~--~kl~DFGla~   91 (351)
                      .-+||+|-+.| -+|.+++.+.  ...++.....++.++..++.-||..|+.|+|+-+.||+++.+|.  ++++||--++
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            35799997765 5888888653  23466666788889999999999999999999999999987777  8999998764

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=97.52  E-value=4.9e-05  Score=71.99  Aligned_cols=43  Identities=51%  Similarity=1.056  Sum_probs=38.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+.+..+|.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~  197 (316)
T cd05592         155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFH  197 (316)
T ss_pred             cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCC
Confidence            4579999999999988889999999999999999998877764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=97.49  E-value=5.6e-05  Score=70.28  Aligned_cols=43  Identities=42%  Similarity=0.849  Sum_probs=38.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~  202 (285)
T cd05631         160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFR  202 (285)
T ss_pred             CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCC
Confidence            3479999999999998889999999999999999998777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=97.47  E-value=5.4e-05  Score=71.89  Aligned_cols=43  Identities=44%  Similarity=0.974  Sum_probs=38.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  197 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY  197 (325)
T ss_pred             cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCC
Confidence            4579999999999998889999999999999999998766663

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=97.47  E-value=4.3e-05  Score=73.38  Aligned_cols=43  Identities=51%  Similarity=1.122  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~  229 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY  229 (340)
T ss_pred             eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence            3579999999999988888999999999999999998766663

>KOG0599|consensus

Probab=97.46  E-value=4.4e-05  Score=69.94  Aligned_cols=44  Identities=41%  Similarity=0.742  Sum_probs=34.0

Q ss_pred             ccCcCCCCcccccccccC------CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQT------GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~------~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||||+|.|||.+.+.      +|+.-+|.|+.|||+|.|+.+.-+|+
T Consensus       180 relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw  229 (411)
T KOG0599|consen  180 RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW  229 (411)
T ss_pred             HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence            356999999999999864      45666788888888888876666554

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=97.46  E-value=6e-05  Score=71.78  Aligned_cols=42  Identities=50%  Similarity=0.967  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf  198 (333)
T cd05600         157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPF  198 (333)
T ss_pred             CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCC
Confidence            457999999999999888999999999999999999876665

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=97.46  E-value=3.8e-05  Score=71.73  Aligned_cols=42  Identities=48%  Similarity=1.048  Sum_probs=37.5

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+||+.|+|||++.+..++.++|+||+||++|+|+.+..++.
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~  199 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFF  199 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            469999999999988888999999999999999998776664

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=97.46  E-value=5.5e-05  Score=71.68  Aligned_cols=43  Identities=51%  Similarity=1.012  Sum_probs=38.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~  197 (316)
T cd05620         155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH  197 (316)
T ss_pred             ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence            4579999999999998889999999999999999998877764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=97.45  E-value=5.5e-05  Score=72.02  Aligned_cols=43  Identities=47%  Similarity=0.989  Sum_probs=38.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~  197 (327)
T cd05617         155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  197 (327)
T ss_pred             cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence            4579999999999988889999999999999999998877774

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0201|consensus

Probab=97.45  E-value=4.3e-05  Score=73.84  Aligned_cols=39  Identities=46%  Similarity=0.775  Sum_probs=36.3

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA  318 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~  318 (351)
                      .+++|||+|||||++.+.+|+.++|+||||+..+||+-+
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~G  207 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKG  207 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcC
Confidence            588999999999999988999999999999999999854

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=97.45  E-value=6.8e-05  Score=71.17  Aligned_cols=43  Identities=49%  Similarity=1.052  Sum_probs=38.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||.+.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~  202 (324)
T cd05589         160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFP  202 (324)
T ss_pred             ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence            4579999999999988888999999999999999998777664

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=97.44  E-value=5.1e-05  Score=72.30  Aligned_cols=43  Identities=44%  Similarity=1.021  Sum_probs=38.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  216 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF  216 (329)
T ss_pred             eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCC
Confidence            3479999999999998888999999999999999998877663

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=97.43  E-value=6.9e-05  Score=70.74  Aligned_cols=43  Identities=51%  Similarity=1.090  Sum_probs=38.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~  194 (312)
T cd05585         152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFY  194 (312)
T ss_pred             cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcC
Confidence            4579999999999998889999999999999999998776663

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=97.42  E-value=6.9e-05  Score=71.44  Aligned_cols=43  Identities=47%  Similarity=0.996  Sum_probs=38.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence            3579999999999998889999999999999999998877763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0601|consensus

Probab=97.41  E-value=5.1e-05  Score=75.94  Aligned_cols=85  Identities=31%  Similarity=0.394  Sum_probs=71.9

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-CcEEEEec
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHIKLSDF   87 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~~kl~DF   87 (351)
                      +-.+....+.|+-.|||.++++...+.-...+.+...+....|++.++.++|+..++|+|+||.||++..+ +..++.||
T Consensus       332 ~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~  411 (524)
T KOG0601|consen  332 NSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDF  411 (524)
T ss_pred             CCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccc
Confidence            33455666788999999999987776555567888889999999999999999999999999999999886 77889999


Q ss_pred             CccccC
Q psy17600         88 GLCTGL   93 (351)
Q Consensus        88 Gla~~~   93 (351)
                      |+.+.+
T Consensus       412 ~~~t~~  417 (524)
T KOG0601|consen  412 GCWTRL  417 (524)
T ss_pred             cccccc
Confidence            987643

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=97.41  E-value=6.6e-05  Score=71.76  Aligned_cols=44  Identities=66%  Similarity=1.103  Sum_probs=38.7

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~  231 (350)
T cd05573         188 NSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY  231 (350)
T ss_pred             cccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence            45579999999999998889999999999999999998766653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=97.41  E-value=9.9e-05  Score=70.09  Aligned_cols=43  Identities=47%  Similarity=1.020  Sum_probs=37.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-+|.
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~  201 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFT  201 (323)
T ss_pred             ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCC
Confidence            3579999999999988888999999999999999998766653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=97.41  E-value=6e-05  Score=71.46  Aligned_cols=43  Identities=53%  Similarity=1.107  Sum_probs=38.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~  197 (316)
T cd05619         155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH  197 (316)
T ss_pred             eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence            3579999999999988889999999999999999998877763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=97.41  E-value=8.1e-05  Score=70.67  Aligned_cols=43  Identities=49%  Similarity=1.025  Sum_probs=38.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~  202 (324)
T cd05587         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD  202 (324)
T ss_pred             eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence            3479999999999998889999999999999999998877764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=97.40  E-value=0.0001  Score=70.29  Aligned_cols=43  Identities=51%  Similarity=1.063  Sum_probs=38.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~  196 (328)
T cd05593         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY  196 (328)
T ss_pred             cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence            3579999999999988889999999999999999998766663

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	351
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-35
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		6e-07
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		8e-35
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-07
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-35
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-34
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		9e-08
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-34
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		1e-07
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		8e-34
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-07
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-33
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-28
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-23
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-08
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-23
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-08
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-22
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		4e-08
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-22
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-08
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		7e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-22
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-22
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-08
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-22
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-22
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		6e-22
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-08
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		6e-22
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-08
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		8e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		6e-22
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		7e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-22
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-08
4ae6_A	343	Structure And Function Of The Human Sperm-specific		7e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-22
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-08
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-22
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-08
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		7e-22
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		7e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		7e-22
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-08
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		7e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		8e-22
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-08
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		7e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		8e-22
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		4e-08
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		7e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		8e-22
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-08
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		7e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		8e-22
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-08
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		7e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-22
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		7e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		8e-22
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-08
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		7e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-21
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-08
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		6e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-21
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-08
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-21
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-21
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		6e-07
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-21
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-08
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-21
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-08
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-21
4ae9_A	343	Structure And Function Of The Human Sperm-specific		4e-08
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-21
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-08
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		8e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-21
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-08
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-21
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-08
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		7e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-21
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-08
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		8e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-21
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-08
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		7e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		3e-21
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-07
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		7e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-21
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-08
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		7e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-21
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-08
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		7e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-21
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-08
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-21
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		9e-08
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-21
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-08
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		7e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-21
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-08
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		7e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-21
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-08
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-21
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-08
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		7e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-21
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-08
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		6e-21
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-07
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		8e-21
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-08
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		7e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		9e-21
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-08
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-20
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-08
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		7e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-20
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-08
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		7e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-20
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-08
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		8e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-20
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-08
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		7e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-20
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-08
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-05
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-20
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-20
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-08
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		7e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-20
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-20
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-20
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-20
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		8e-20
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-08
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-05
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-18
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		5e-09
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-17
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		5e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-17
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		6e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-17
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-17
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-17
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-08
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-17
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		7e-17
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-16
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		6e-07
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		8e-16
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		5e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-15
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-15
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-07
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-14
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-08
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		9e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-14
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-08
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		9e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-14
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		4e-14
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-14
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-08
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		9e-05
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-14
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		8e-08
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		9e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-14
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-14
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-14
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		8e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		9e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-14
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-14
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-13
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-13
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-13
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-13
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-13
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-13
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-13
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-13
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-13
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-13
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-13
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-13
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-13
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-13
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-13
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-13
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-13
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-13
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-13
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-13
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-13
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-13
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-13
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-13
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-13
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-13
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		6e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-13
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		6e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		3e-13
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-13
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		3e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-13
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		4e-13
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-13
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-13
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-13
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-13
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		7e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		8e-13
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		9e-13
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		9e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		9e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		6e-04
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		9e-13
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		6e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-12
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-12
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		9e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-12
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-12
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-07
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-12
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		9e-08
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-12
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		8e-08
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		9e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-12
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-12
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		8e-08
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		9e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-12
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		8e-08
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-12
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		8e-08
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		9e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-12
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-12
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		6e-11
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-10
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-10
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-10
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-10
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-10
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-10
4fie_A	423	Full-Length Human Pak4 Length = 423		7e-10
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		8e-10
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		9e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		9e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		4e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		9e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		4e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-09
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		5e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-09
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-09
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-09
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-09
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-09
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-09
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		5e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-09
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-09
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		7e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-09
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		6e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-09
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-09
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-09
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-09
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-09
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		5e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-09
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-09
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		8e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-09
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		4e-09
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-09
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		9e-05
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		4e-09
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-09
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		9e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		4e-09
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-09
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		6e-09
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		7e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		7e-09
3soa_A	444	Full-Length Human Camkii Length = 444		8e-09
3soa_A	444	Full-Length Human Camkii Length = 444		7e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-08
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-08
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-08
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		8e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-08
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-08
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-08
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-08
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-08
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-08
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-08
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		6e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		6e-05
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-08
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		7e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		7e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		3e-08
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-08
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		4e-08
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-08
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-08
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-08
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-08
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		4e-08
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-08
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-08
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		5e-08
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		5e-08
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		5e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		5e-08
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		5e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		5e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		6e-08
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		6e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		6e-08
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		6e-08
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		6e-08
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		6e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		6e-08
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		7e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		9e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-05
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-07
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-07
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-07
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-07
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-07
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-07
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-07
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-07
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-07
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-07
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-07
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-07
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-07
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-07
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-07
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-07
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-07
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-07
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-07
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-07
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-07
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-07
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-07
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-07
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-07
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-07
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-07
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-07
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-07
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-07
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-07
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-07
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		7e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-07
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-07
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-07
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-07
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-07
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		4e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-07
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-07
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		5e-07
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		5e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		6e-07
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		7e-07
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		7e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		7e-07
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		7e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		7e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		8e-07
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		9e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-06
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-06
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-04
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		3e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		3e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		7e-04
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-06
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-06
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-06
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-06
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		4e-06
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-06
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-06
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		5e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-06
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		5e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		7e-06
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		7e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		7e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		7e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		7e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		7e-06
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		8e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		8e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-06
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		9e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		9e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		9e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		9e-06
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-05
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-05
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-05
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-05
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-05
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		1e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-05
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-05
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-05
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-05
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
4ax8_A	569	Medium Resolution Structure Of The Bifunctional Kin		2e-05
4azs_A	569	High Resolution (2.2 A) Crystal Structure Of Wbdd.		2e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-05
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-05
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-05
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-05
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-05
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		2e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-05
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-05
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-05
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-05
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-05
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-05
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-05
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		3e-05
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		3e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-05
4azw_A	471	Crystal Structure Of Monomeric Wbdd Length = 471		3e-05
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-05
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		3e-05
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		3e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-05
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-05
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		4e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		4e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		4e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		4e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-05
1fvr_A	327	Tie2 Kinase Domain Length = 327		4e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		5e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		5e-05
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		5e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		5e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		5e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		5e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-05
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-05
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		5e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		5e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		6e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		6e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		6e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		6e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		6e-05
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		6e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		6e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-05
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		6e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		6e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		6e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		6e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-05
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		6e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		6e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		6e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		6e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		6e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		6e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		7e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		7e-05
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		7e-05
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		7e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		7e-05
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		7e-05
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		7e-05
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		7e-05
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		7e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		7e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-05
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		7e-05
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		7e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		7e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		7e-05
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		7e-05
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		7e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-05
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		8e-05
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		8e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		8e-05
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		8e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		9e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		9e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		9e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		9e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		9e-05
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-04
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-04
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-04
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-04
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		1e-04
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-04
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-04
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		1e-04
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-04
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		1e-04
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-04
2oza_A	356	Structure Of P38alpha Complex Length = 356		1e-04
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-04
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		2e-04
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-04
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-04
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-04
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		2e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		3e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-04
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-04
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		4e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		5e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		5e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		5e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		5e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		5e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		5e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		5e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		5e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		5e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-04
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		6e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		7e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		7e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		9e-04
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		9e-04

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 39/260 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +G IHRD+KPDN+LLD
Sbjct: 150 LYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 208
Query: 78  ARGHIKLSDFGLC-----TGLK-----------------KSHRTDFY--RDLSQAKPSDF 113
             GH+KL+DFG C     TG+                  KS   D Y  R+        F
Sbjct: 209 KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
            +       PF +++   TY K+M  +++L FP +  IS+ A+  I  F ++ + RLG  
Sbjct: 269 LFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGR- 327
Query: 168 RGVEELKSLGACQFFRGV--DWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
            GVEE+K      FF+    +WD+IRE  A +  ++ S  D+SNFDD  D K ++ + P+
Sbjct: 328 NGVEEIKQ---HPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPI 384
Query: 226 PQDGEIIYKDWVFINYTFKR 245
           P+    +     FI +T+ R
Sbjct: 385 PK--AFVGNQLPFIGFTYYR 402

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
           + VGTPDYI+PEV    G    YG   DWWS+GV ++EML+    F
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score =  144 bits (362), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 149/280 (53%), Gaps = 45/280 (16%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 144 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 202
Query: 78  ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
             GH+KL+DFG C  +                       KS   D Y  R+        F
Sbjct: 203 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
            Y       PF +++   TY K+M+ +++L FP +  IS+EA+  I  F ++ + RLG  
Sbjct: 263 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 321
Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
            GVEE+K      FF+     W+ +R+  A +   + S  DTSNFDD  + K E  + P+
Sbjct: 322 NGVEEIKR---HLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPI 378
Query: 226 PQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSK 265
           P+    +     F+ +T+    +N  +   LSS NP D++
Sbjct: 379 PK--AFVGNQLPFVGFTYY---SNRRY---LSSANPNDNR 410

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
           + VGTPDYI+PEV    G    YG   DWWS+GV +YEML+    F
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score =  144 bits (362), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 149/280 (53%), Gaps = 45/280 (16%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 149 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 78  ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
             GH+KL+DFG C  +                       KS   D Y  R+        F
Sbjct: 208 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
            Y       PF +++   TY K+M+ +++L FP +  IS+EA+  I  F ++ + RLG  
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 326
Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
            GVEE+K      FF+     W+ +R+  A +   + S  DTSNFDD  + K E  + P+
Sbjct: 327 NGVEEIKR---HLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPI 383
Query: 226 PQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSK 265
           P+    +     F+ +T+    +N  +   LSS NP D++
Sbjct: 384 PK--AFVGNQLPFVGFTYY---SNRRY---LSSANPNDNR 415

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
           + VGTPDYI+PEV    G    YG   DWWS+GV +YEML+    F
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 37/263 (14%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D  NLYL+M++  GGD++TLL K +D L EE  +FY+AE  +AIDS+H+L ++HRDIKPD
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPD 204
Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRT---------DFYR-DLSQAKPSD---------- 112
           N+L+D  GHI+L+DFG C  L +             D+   ++ QA              
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264
Query: 113 -----------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFCSEC 160
                      +   PF +E+  ETY K+M+ ++   FP +V  +SE A++ I R     
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR 324
Query: 161 DRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEI 220
           + RLG   G+E+ K      FF G+DWD+IR   A    +V S  DTSNFD   D     
Sbjct: 325 EHRLGQ-NGIEDFKKH---PFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNS 380
Query: 221 PSAPLPQDGEIIYKDWVFINYTF 243
            + P P           F+ +T+
Sbjct: 381 ETMPPPTHTAFSGHHLPFVGFTY 403

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 282 TVGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
            VGTPDYI+PE+   ++ G   YGP  DWWSLGV MYEML     F
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score =  141 bits (355), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 126/240 (52%), Gaps = 43/240 (17%)
Query: 13  SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
            D  +LYL+M++  GGD++TLL K +D L E+  +FYI E  LAIDSIH+L ++HRDIKP
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 219
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------- 116
           DN+LLD  GHI+L+DFG C  LK +        ++   P D+  P               
Sbjct: 220 DNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAVGTP-DYISPEILQAMEDGMGKYGP 276
Query: 117 -------------------PFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRF 156
                              PF +E+  ETY K+M+  +   FP  V  +SEEA++ I R 
Sbjct: 277 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL 336
Query: 157 CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDV 216
               +RRLG   G+E+ K      FF G++W++IR   A     V S  DTSNFD   DV
Sbjct: 337 ICSRERRLGQ-NGIEDFKKHA---FFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDV 392

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 282 TVGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
            VGTPDYI+PE+   ++ G   YGP  DWWSLGV MYEML     F
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score =  140 bits (354), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 126/240 (52%), Gaps = 43/240 (17%)
Query: 13  SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
            D  +LYL+M++  GGD++TLL K +D L E+  +FYI E  LAIDSIH+L ++HRDIKP
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 203
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------- 116
           DN+LLD  GHI+L+DFG C  LK +        ++   P D+  P               
Sbjct: 204 DNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAVGTP-DYISPEILQAMEDGMGKYGP 260
Query: 117 -------------------PFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRF 156
                              PF +E+  ETY K+M+  +   FP  V  +SEEA++ I R 
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL 320
Query: 157 CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDV 216
               +RRLG   G+E+ K      FF G++W++IR   A     V S  DTSNFD   DV
Sbjct: 321 ICSRERRLGQ-NGIEDFKKHA---FFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDV 376

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 282 TVGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
            VGTPDYI+PE+   ++ G   YGP  DWWSLGV MYEML     F
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 37/242 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 149 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 78  ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
             GH+KL+DFG C  +                       KS   D Y  R+        F
Sbjct: 208 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
            Y       PF +++   TY K+M+ +++L FP +  IS+EA+  I  F ++ + RLG  
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 326
Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
            GVEE+K      FF+     W+ +R+  A +   + S  DTSNFDD  + K E  + P+
Sbjct: 327 NGVEEIKR---HLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPI 383
Query: 226 PQ 227
           P+
Sbjct: 384 PK 385

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
           + VGTPDYI+PEV    G    YG   DWWS+GV +YEML+    F
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 115/232 (49%), Gaps = 45/232 (19%)
Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           LYL+ME+  GGD++TLL K  + +  E  +FY+AE  +AIDS+H+LG++HRDIKPDN+LL
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP-------------------- 116
           D  GHI+L+DFG C  L+        R L      D+  P                    
Sbjct: 196 DRCGHIRLADFGSCLKLRADGTV---RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECD 252
Query: 117 ----------------PFCSENPQETYRKVMSWRDTLVFP-PEVPISEEARETIVRFCSE 159
                           PF +++  ETY K++ +++ L  P  +  + EEAR+ I R    
Sbjct: 253 WWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP 312
Query: 160 CDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFD 211
            + RLG   G  + ++     FF G+DWD +R+         +   DT NFD
Sbjct: 313 PETRLGRG-GAGDFRT---HPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFD 360

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGGDM + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGGDM + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF----- 113
           +KP+NLL+D +G+I+++DFG    +K    T          +        K  D+     
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
                   YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
           + + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 284 NLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   ++  GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFGL   +K   RT            +        K  D+   
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 93  EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF----- 113
           +KP+NLL+D +G+I+++DFG    +K    T          +        K  D+     
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
                   YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G
Sbjct: 213 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 268
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
           + + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 269 NLKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 323

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   ++  GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 172 GFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEM 217

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 301
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 302 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 358

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 207 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEM 252

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 273
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 274 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 330

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 182 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEM 224

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+I+++DFGL   +K   RT            +        K  D+   
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 37/237 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF------ 113
           +NLL+D +G+I+++DFG    +K   RT            +        K  D+      
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
                  YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G+
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGN 283
Query: 167 AR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 284 LKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 37/237 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF------ 113
           +NLL+D +G+I+++DFG    +K   RT            +        K  D+      
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
                  YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G+
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGN 283
Query: 167 AR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 284 LKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 37/237 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF------ 113
           +NLL+D +G+I+++DFG    +K   RT            +        K  D+      
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
                  YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G+
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGN 283
Query: 167 AR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 284 LKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF----- 113
           +KP+NLL+D +G+I+++DFG    +K +  T          +        K  D+     
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
                   YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 303
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
           + + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 304 NLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 358

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   ++  GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 207 GFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 302 AADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEM 343
            A W   G   Y   +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 214 GATWTLCGTPEY---LAPEIILSKGYNKAVDWWALGVLIYEM 252

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY+++E+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLI+E+L GG++   L ++    E+   FY+AE ++A+  +H+ G I+RD+KP+N++L+
Sbjct: 96  LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 78  ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
            +GH+KL+DFGLC              G  +    +        +  D+           
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
              PPF  EN ++T  K++  +  L  PP   +++EAR+ + +        RLG+  G  
Sbjct: 216 TGAPPFTGENRKKTIDKILKCK--LNLPPY--LTQEARDLLKKLLKRNAASRLGAGPG-- 269
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
           +   + A  FFR ++W+ +  R    P +  ++S +D S FD
Sbjct: 270 DAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
            + +   GT +Y+APE+ +++G+  A DWWSLG +MY+ML     F
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLI+E+L GG++   L ++    E+   FY+AE ++A+  +H+ G I+RD+KP+N++L+
Sbjct: 96  LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 78  ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
            +GH+KL+DFGLC              G  +    +        +  D+           
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
              PPF  EN ++T  K++  +  L  PP   +++EAR+ + +        RLG+  G  
Sbjct: 216 TGAPPFTGENRKKTIDKILKCK--LNLPPY--LTQEARDLLKKLLKRNAASRLGAGPG-- 269
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
           +   + A  FFR ++W+ +  R    P +  ++S +D S FD
Sbjct: 270 DAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
            + ++  GT +Y+APE+ +++G+  A DWWSLG +MY+ML     F
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 273
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 274 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 330

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 179 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEM 224

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME+ PGG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+IK++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++PGG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++ +    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIXN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLK----------KSHRTDFYRDLSQAKPSDF----- 113
           +KP+NLL+D +G+I+++DFG    +K          ++   +        K  D+     
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
                   YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R G
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
           + + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 283 NLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+ +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 39/241 (16%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD--R 162
                     YPPF ++ P + Y K++S +  + FP     S + ++ ++R   + D  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKD-LLRNLLQVDLTK 279
Query: 163 RLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLE 219
           R G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ 
Sbjct: 280 RFGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Query: 220 I 220
           +
Sbjct: 337 V 337

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++Y+M
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++Y+M
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQM 231

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 39/241 (16%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD--R 162
                     YPPF ++ P + Y K++S +  + FP     S + ++ ++R   + D  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKD-LLRNLLQVDLTK 280
Query: 163 RLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLE 219
           R G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ 
Sbjct: 281 RFGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Query: 220 I 220
           +
Sbjct: 338 V 338

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 94  EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 153
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 212 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 267
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 268 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 324

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 176 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEM 218

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKK----------------------SHRTDFYRDLS 106
           +KP+NLL+D +G+I+++DFG    +K                       +   D++    
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 107 QAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD--RRL 164
                   YPPF ++ P + Y K++S +  + FP     S + ++ ++R   + D  +R 
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKD-LLRNLLQVDLTKRF 281
Query: 165 GSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
           G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 282 GNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+AP + L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +AP + L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    +E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NL++D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ +  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ +  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEM 231

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 301
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 302 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIAV 358

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 207 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEM 252

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 220 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 275
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 276 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 332

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 184 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEM 226

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +     E   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            LYLI++FL GGD+ T L K+   +EE  +FY+AE AL +D +H LG I+RD+KP+N+LL
Sbjct: 104 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL 163
Query: 77  DARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSD-FSYP------ 116
           D  GHIKL+DFGL               G  +    +       +  +D +SY       
Sbjct: 164 DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 117 -----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI-VRFCSECDRRLGSA-RG 169
                PF  ++ +ET   ++  +  +   P+  +S EA+  +   F      RLGS   G
Sbjct: 224 LTGSLPFQGKDRKETMTLILKAKLGM---PQF-LSTEAQSLLRALFKRNPANRLGSGPDG 279
Query: 170 VEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
            EE+K      F+  +DW+ +  R    P +  V   DDT  FD
Sbjct: 280 AEEIKR---HVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           AYS  GT +Y+APEV  + G+  +ADWWS GV+M+EML  
Sbjct: 187 AYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  + 
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKA 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+ + GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            LYLI++FL GGD+ T L K+   +EE  +FY+AE ALA+D +H LG I+RD+KP+N+LL
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 77  DARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF---------- 113
           D  GHIKL+DFGL               G  +    +        + +D+          
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
Query: 114 --SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI-VRFCSECDRRLGSA-RG 169
                PF  ++ +ET   ++  +  +   P+  +S EA+  + + F      RLG+   G
Sbjct: 220 LTGTLPFQGKDRKETMTMILKAKLGM---PQF-LSPEAQSLLRMLFKRNPANRLGAGPDG 275
Query: 170 VEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
           VEE+K      FF  +DW+ +  R    P +      +DT  FD
Sbjct: 276 VEEIKR---HSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFD 316

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           AYS  GT +Y+APEV  + G+  +ADWWS GV+M+EML  
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            LYLI++FL GGD+ T L K+   +EE  +FY+AE ALA+D +H LG I+RD+KP+N+LL
Sbjct: 101 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 160
Query: 77  DARGHIKLSDFGLC 90
           D  GHIKL+DFGL 
Sbjct: 161 DEEGHIKLTDFGLS 174

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           AYS  GT +Y+APEV  + G+  +ADWWS GV+M+EML  
Sbjct: 184 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  + G+  +ADWWS GV+M+EML
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEML 221

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            LYLI++FL GGD+ T L K+   +EE  +FY+AE ALA+D +H LG I+RD+KP+N+LL
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 77  DARGHIKLSDFGLC 90
           D  GHIKL+DFGL 
Sbjct: 160 DEEGHIKLTDFGLS 173

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           AYS  GT +Y+APEV  + G+  +ADWWS GV+M+EML  
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  + G+  +ADWWS GV+M+EML
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEML 220

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 42/251 (16%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   +++IM+++ GG++ +LL K         +FY AE  LA++ +H    I+RD+KP
Sbjct: 75  FQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKP 134
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRT-----DFYR-DLSQAKPSDFS----------- 114
           +N+LLD  GHIK++DFG    +           D+   ++   KP + S           
Sbjct: 135 ENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIY 194
Query: 115 -----YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSAR 168
                Y PF   N  +TY K+++    L FPP    +E+ ++ + R  + +  +RLG+ +
Sbjct: 195 EMLAGYTPFYDSNTMKTYEKILNAE--LRFPPF--FNEDVKDLLSRLITRDLSQRLGNLQ 250
Query: 169 -GVEELKSLGACQFFRGVDWDHIRER----PAAIPVQVKSIDDTSNFDDFPD------VK 217
            G E++K+     +F+ V W+ +  R    P   P+Q +   DTS FD +P+      V+
Sbjct: 251 NGTEDVKN---HPWFKEVVWEKLLSRNIETPYEPPIQ-QGQGDTSQFDKYPEEDINYGVQ 306
Query: 218 LEIPSAPLPQD 228
            E P A L +D
Sbjct: 307 GEDPYADLFRD 317

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           + Y   GTPDYIAPEV     Y  + DWWS G+++YEML         GY P  D
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML--------AGYTPFYD 205

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 37/240 (15%)
Query: 9   QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           +    D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
           +KP+NLL+D +G+I+++DFG    +K   RT            +        K  D+   
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                     YPPF ++ P + Y K++S +  + FP     S + ++ +      +  +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
            G+   GV ++K+    ++F   DW  I +R    P   + K   DTSN DD+ + ++ +
Sbjct: 281 FGNLPNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEEEIRV 337

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            + K  +   +   GTP+Y+APE+ L  GY  A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APE+ L  GY  A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 45/268 (16%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L+ +MEF+ GGD+M  + K     E   +FY AE   A+  +H  G I+RD+K DN+
Sbjct: 96  PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNV 155
Query: 75  LLDARGHIKLSDFGLCT-GLKKSHRT------------DFYRDLSQAKPSDF-------- 113
           LLD  GH KL+DFG+C  G+     T            +  +++      D+        
Sbjct: 156 LLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215
Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGS-A 167
                + PF +EN  + +  +++  D +V+P    + E+A   +  F ++    RLGS  
Sbjct: 216 EMLCGHAPFEAENEDDLFEAILN--DEVVYP--TWLHEDATGILKSFMTKNPTMRLGSLT 271
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIPSAPL 225
           +G E   ++    FF+ +DW  +  R    P   ++KS +D SNFD  PD   E P    
Sbjct: 272 QGGEH--AILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD--PDFIKEEPVLXP 327
Query: 226 PQDGEI--IYKDWVFINYTFKRFEANSP 251
             +G +  I +D       F+ FE  SP
Sbjct: 328 IDEGHLPMINQD------EFRNFEYVSP 349

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTPDYIAPE+  +  YGPA DWW++GV++YEML     F
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE ++ +  +HK G I+RD+K DN++LD
Sbjct: 95  LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 78  ARGHIKLSDFGLCTGLKKSHRTD------FYRDLSQAKPSDFSY---------------- 115
           + GHIK++DFG+C    K H  D      F        P   +Y                
Sbjct: 155 SEGHIKIADFGMC----KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 210
Query: 116 -------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
                  PPF  E+  E ++ +M     + +P    +S+EA        ++   +RLG  
Sbjct: 211 YEMLAGQPPFDGEDEDELFQSIME--HNVSYPKS--LSKEAVSICKGLMTKHPAKRLGC- 265
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTS-NFDDF 213
            G E  + +    FFR +DW+ +  R    P + K     + NFD F
Sbjct: 266 -GPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKF 311

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTPDYIAPE+     YG + DWW+ GV++YEML
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 81  LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 140
Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
           + GHIKL+D+G+C  GL+    T  +         ++ + +   FS              
Sbjct: 141 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 116 ---PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDRRLGS 166
               PF     S+NP +     + ++  L     +P  +S +A   +  F ++  +    
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG 259
Query: 167 ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
                    +    FFR VDWD + ++    P +  +I      D+F       P    P
Sbjct: 260 CHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK-PNISGEFGLDNFDSQFTNEPVQLXP 318
Query: 227 QDGEIIYK 234
            D +I+ K
Sbjct: 319 DDDDIVRK 326

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F   G     D     +   VI
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
Query: 340 MYEMLIVSRNIT 351
           + + + + R+++
Sbjct: 228 LEKQIRIPRSLS 239

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 85  LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144
Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
           + GHIKL+D+G+C  GL+    T  +         ++ + +   FS              
Sbjct: 145 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 116 ---PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDRRLGS 166
               PF     S+NP +     + ++  L     +P  +S +A   +  F ++  +    
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG 263
Query: 167 ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
                    +    FFR VDWD + ++    P +  +I      D+F       P    P
Sbjct: 264 CHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK-PNISGEFGLDNFDSQFTNEPVQLXP 322
Query: 227 QDGEIIYK 234
            D +I+ K
Sbjct: 323 DDDDIVRK 330

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F   G     D     +   VI
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
Query: 340 MYEMLIVSRNIT 351
           + + + + R+++
Sbjct: 232 LEKQIRIPRSLS 243

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
           + GHIKL+D+G+C  GL+    T  +         ++ + +   FS              
Sbjct: 188 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 116 ---PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDRRLGS 166
               PF     S+NP +     + ++  L     +P  +S +A   +  F ++  +    
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG 306
Query: 167 ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
                    +    FFR VDWD + ++    P +  +I      D+F       P    P
Sbjct: 307 CHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK-PNISGEFGLDNFDSQFTNEPVQLXP 365
Query: 227 QDGEIIYK 234
            D +I+ K
Sbjct: 366 DDDDIVRK 373

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F   G     D     +   VI
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
Query: 340 MYEMLIVSRNIT 351
           + + + + R+++
Sbjct: 275 LEKQIRIPRSLS 286

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           NL+ +ME+L GGD+M  +            FY AE  L +  +H  G ++RD+K DN+LL
Sbjct: 92  NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
Query: 77  DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
           D  GHIK++DFG+C                          G K +H  D++         
Sbjct: 152 DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211
Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
                PF  ++ +E +  +    D   +P    + +EA++ +V+ F  E ++RLG  RG 
Sbjct: 212 LIGQSPFHGQDEEELFHSIRM--DNPFYPRW--LEKEAKDLLVKLFVREPEKRLG-VRG- 265
Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
                +     FR ++W+ +  +    P   +VKS  D SNFD
Sbjct: 266 ----DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 304

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTPDYIAPE+ L   Y  + DWWS GV++YEMLI    F
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           NL+ +ME+L GGD+M  +            FY AE  L +  +H  G ++RD+K DN+LL
Sbjct: 93  NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
Query: 77  DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
           D  GHIK++DFG+C                          G K +H  D++         
Sbjct: 153 DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
                PF  ++ +E +  +    D   +P    + +EA++ +V+ F  E ++RLG  RG 
Sbjct: 213 LIGQSPFHGQDEEELFHSIRM--DNPFYPRW--LEKEAKDLLVKLFVREPEKRLG-VRG- 266
Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
                +     FR ++W+ +  +    P   +VKS  D SNFD
Sbjct: 267 ----DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 305

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTPDYIAPE+ L   Y  + DWWS GV++YEMLI    F
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 35/222 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +++++ GG++   L ++    E   +FY AE A A+  +H L  ++RD+KP+N+LLD
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 173
Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSD---------------- 112
           ++GHI L+DFGLC   ++ +  T  +         ++   +P D                
Sbjct: 174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
           +  PPF S N  E Y  +++    L   P   I+  AR  +      +  +RLG+     
Sbjct: 234 YGLPPFYSRNTAEMYDNILN--KPLQLKPN--ITNSARHLLEGLLQKDRTKRLGAKDDFM 289
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
           E+KS     FF  ++WD +  +    P    V   +D  +FD
Sbjct: 290 EIKS---HVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFD 328

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV  +  Y    DWW LG ++YEML
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 96  LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 78  ARGHIKLSDFGLCT-GLKKSHRTDFY 102
           + GHIKL+D+G+C  GL+    T  +
Sbjct: 156 SEGHIKLTDYGMCKEGLRPGDTTSXF 181

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
           GTP+YIAPE+     YG + DWW+LGV+M+EM+     F   G     D     +   VI
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
Query: 340 MYEMLIVSRNIT 351
           + + + + R+++
Sbjct: 243 LEKQIRIPRSMS 254

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L+LI++++ GG++ T L +++  +E   Q Y+ E  LA++ +HKLG I+RDIK +N+LL
Sbjct: 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
Query: 77  DARGHIKLSDFGLCT--------------GLKKSHRTDFYR--DLSQAKPSDF------- 113
           D+ GH+ L+DFGL                G  +    D  R  D    K  D+       
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252
Query: 114 -----SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFC-SECDRRLG 165
                   PF  +  + +  ++   R  L   P  P  +S  A++ I R    +  +RLG
Sbjct: 253 YELLTGASPFTVDGEKNSQAEIS--RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 310
Query: 166 SA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNF 210
              R  +E+K      FF+ ++WD +  +    P +  ++   D SNF
Sbjct: 311 CGPRDADEIKE---HLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
           IIY+D    N            +F LS     D   RA           Y   GT +Y+A
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA-----------YDFCGTIEYMA 228
Query: 291 PEVFL--QTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
           P++     +G+  A DWWSLGV+MYE+L     F   G
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 51/271 (18%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE A+ +  +   G I+RD+K DN++LD
Sbjct: 96  LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------------- 116
           + GHIK++DFG+C    K +  D           D+  P                     
Sbjct: 156 SEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 117 --------PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
                   PF  E+  E ++ +M     + +P    +S+EA        ++   +RLG  
Sbjct: 212 YEMLAGQAPFEGEDEDELFQSIME--HNVAYPKS--MSKEAVAICKGLMTKHPGKRLGC- 266
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSID-DTSNFDDFPDVKLEIPSAPLP 226
            G E  + +    FFR +DW+ +  +    P + K+   +  NFD F       P    P
Sbjct: 267 -GPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGRNAENFDRF---FTRHPPVLXP 322
Query: 227 QDGEII-------YKDWVFINYTFKRFEANS 250
            D E+I       ++ + F+N  F + E  S
Sbjct: 323 PDQEVIRNIDQSEFEGFXFVNSEFLKPEVKS 353

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTPDYIAPE+     YG + DWW+ GV++YEML     F
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 51/271 (18%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE A+ +  +   G I+RD+K DN++LD
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------------- 116
           + GHIK++DFG+C    K +  D           D+  P                     
Sbjct: 477 SEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 117 --------PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
                   PF  E+  E ++ +M     + +P    +S+EA        ++   +RLG  
Sbjct: 533 YEMLAGQAPFEGEDEDELFQSIME--HNVAYPKS--MSKEAVAICKGLMTKHPGKRLGC- 587
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVK-SIDDTSNFDDFPDVKLEIPSAPLP 226
            G E  + +    FFR +DW+ +  +    P + K S  +  NFD F       P    P
Sbjct: 588 -GPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGRNAENFDRF---FTRHPPVLXP 643
Query: 227 QDGEII-------YKDWVFINYTFKRFEANS 250
            D E+I       ++ + F+N  F + E  S
Sbjct: 644 PDQEVIRNIDQSEFEGFXFVNSEFLKPEVKS 674

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTPDYIAPE+     YG + DWW+ GV++YEML     F
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 223 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282
Query: 77  DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
           D  GHIK++DFGLC  G+K                       D+ R +         Y  
Sbjct: 283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
            C   P   + + K+  +   + + FP    +  EA+  +      +  +RLG   G E+
Sbjct: 343 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 398
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
            K +   +FF G+ W H+ E+  + P   QV S  DT  FD+
Sbjct: 399 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 343

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 226 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 77  DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
           D  GHIK++DFGLC  G+K                       D+ R +         Y  
Sbjct: 286 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
            C   P   + + K+  +   + + FP    +  EA+  +      +  +RLG   G E+
Sbjct: 346 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 401
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
            K +   +FF G+ W H+ E+  + P   QV S  DT  FD+
Sbjct: 402 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 443

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 346

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 84  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RTD    L    P                      +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RTD    L    P                       
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 85  LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 144
Query: 77  DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
           D  GHIK++DFGLC  G+K                       D+ R +         Y  
Sbjct: 145 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
            C   P   + + K+  +   + + FP    +  EA+  +      +  +RLG   G E+
Sbjct: 205 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 260
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
            K +   +FF G+ W H+ E+  + P   QV S  DT  FD+
Sbjct: 261 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 302

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 205

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 84  LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 143
Query: 77  DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
           D  GHIK++DFGLC  G+K                       D+ R +         Y  
Sbjct: 144 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
            C   P   + + K+  +   + + FP    +  EA+  +      +  +RLG   G E+
Sbjct: 204 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 259
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
            K +   +FF G+ W H+ E+  + P   QV S  DT  FD+
Sbjct: 260 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 301

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 204

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 80  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RTD    L    P                      +
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 241

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 83  DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSE-CDRRLGSARG 169
                PPF +   QETYR++   R    FP  V  +E AR+ I R       +RL  A  
Sbjct: 203 FLVGMPPFEAHTYQETYRRIS--RVEFTFPDFV--TEGARDLISRLLKHNASQRLTLAEV 258
Query: 170 VEE 172
           +E 
Sbjct: 259 LEH 261

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 83  LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 142
Query: 77  DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
           D  GHIK++DFGLC  G+K                       D+ R +         Y  
Sbjct: 143 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
            C   P   + + K+  +   + + FP    +  EA+  +      +  +RLG   G E+
Sbjct: 203 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 258
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
            K +   +FF G+ W H+ E+  + P   QV S  DT  FD+
Sbjct: 259 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 300

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 203

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RTD    L    P                      +
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G++   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 84  DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT     L    P                      +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT+    L    P                      +
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 84  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYE 203
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G++   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 84  DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S R      L    P                      +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 1   MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH 60
           +K Y C +     D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H
Sbjct: 100 VKLYFCFQ-----DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ---------- 107
             G IHRD+KP+N+LL+   HI+++DFG    L    K  R + +   +Q          
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 108 --AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARET 152
              K SD               PPF + N    ++K++       FP +  P + +  E 
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEK 272
Query: 153 IVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER 193
           ++    +  +RLG    +E    L A  FF  V W+++ ++
Sbjct: 273 LLVL--DATKRLGCEE-MEGYGPLKAHPFFESVTWENLHQQ 310

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 82  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S R D    L    P                       
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 83  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 143 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 203 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 244

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 83  DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S R      L    P                       
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSE-CDRRLGSARG 169
                PPF +   QETYR++   R    FP  V  +E AR+ I R       +RL  A  
Sbjct: 203 FLVGMPPFEAHTYQETYRRIS--RVEFTFPDFV--TEGARDLISRLLKHNASQRLTLAEV 258
Query: 170 VEE 172
           +E 
Sbjct: 259 LEH 261

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 84  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT     L    P                      +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 104 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 163
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 164 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP       +AR+ + +    +  +R
Sbjct: 224 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FP--AAFFPKARDLVEKLLVLDATKR 279
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 280 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 308

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 164
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S R D    L    P                      +
Sbjct: 165 LLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 225 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 266

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 164
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT     L    P                      +
Sbjct: 165 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 225 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 266

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 82  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT     L    P                      +
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 96  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 155
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT     L    P                      +
Sbjct: 156 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 215
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 216 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 257

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 80  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S RT     L    P                      +
Sbjct: 140 LLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 241

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 99  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 78  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 137
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 138 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 197
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 198 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 239

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 98  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
                      PPF + N    ++K++       FP +  P + +  E ++    +  +R
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLL--VLDATKR 273
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 274 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 302

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 99  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 102 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 277
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 278 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 306

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 76  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 135
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 136 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 195
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 196 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 237

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
                      PPF + N    ++K++       FP +  P + +  E ++    +  +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL--DATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 83  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 142
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 143 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
                      PPF + N    ++K++       FP +  P + +  E ++    +  +R
Sbjct: 203 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLL--VLDATKR 258
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 259 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 287

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 82  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S RT     L    P                       
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
                      PPF + N    ++K++       FP +  P + +  E ++    +  +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL--DATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 99  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
                      PPF + N    ++K++       FP +  P + +  E ++    +  +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL--DATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 49/293 (16%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N+
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 75  LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
           LLD  GH+++SD GL      KK H +             + ++    +D+         
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
               + PF      +T  K    R TL    E+P   S E R  +      + +RRLG  
Sbjct: 384 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
            RG +E+K      FFR +DW  +   +  P  IP   +V + D  D  +FD  D   +K
Sbjct: 441 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 497
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
           L      L  D E+     + I+  +++  A + F+   + T+ ++++++A++
Sbjct: 498 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAKN 544

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
           +++VGT  Y+APEV LQ G  Y  +ADW+SLG +++++L     F Q
Sbjct: 348 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 79  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 138
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 139 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 199 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 254
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 255 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 283

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 78  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 137
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 138 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 198 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 253
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 254 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 282

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 49/293 (16%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N+
Sbjct: 263 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 322
Query: 75  LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
           LLD  GH+++SD GL      KK H +             + ++    +D+         
Sbjct: 323 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
               + PF      +T  K    R TL    E+P   S E R  +      + +RRLG  
Sbjct: 383 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 439
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
            RG +E+K      FFR +DW  +   +  P  IP   +V + D  D  +FD  D   +K
Sbjct: 440 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 496
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
           L      L  D E+     + I+  +++  A + F+   + T+ ++++++A++
Sbjct: 497 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAKN 543

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
           +++VGT  Y+APEV LQ G  Y  +ADW+SLG +++++L     F Q
Sbjct: 347 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 77  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 136
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 137 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 197 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 252
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 253 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 281

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 99  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 76  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 135
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 136 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 196 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 251
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 252 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 280

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 98  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
                      PPF + N    ++K++       FP +  P + +  E ++    +  +R
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLL--VLDATKR 273
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 274 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 302

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 102 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 277
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 278 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 306

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    + K++       FP +     +AR+ + +    +  +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q             K SD    
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    + K++       FP +     +AR+ + +    +  +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 82  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K+++FG       S RT     L    P                       
Sbjct: 142 LLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 81  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 140
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K+++FG       S RT     L    P                      +
Sbjct: 141 LLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 200
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 201 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 242

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 82  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S R      L    P                      +
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   LY  + +   G ++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72  DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
           +N+LL+   HI+++DFG    L    K  R + +   +Q            +K SD    
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
                      PPF + N    ++K++       FP +     +AR+ + +    +  +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
           LG    +E    L A  FF  V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 81  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 140
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S R      L    P                      +
Sbjct: 141 LLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 200
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 201 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 242

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S R      L    P                       
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 49/293 (16%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N+
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 75  LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
           LLD  GH+++SD GL      KK H +             + ++    +D+         
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
               + PF      +T  K    R TL    E+P   S E R  +      + +RRLG  
Sbjct: 384 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
            RG +E+K      FFR +DW  +   +  P  IP   +V + D  D  +FD  D   +K
Sbjct: 441 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 497
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
           L      L  D E+     + I+  +++  A + F+   + T+ ++++++ ++
Sbjct: 498 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKN 544

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
           +++VGT  Y+APEV LQ G  Y  +ADW+SLG +++++L     F Q
Sbjct: 348 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 49/293 (16%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N+
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 75  LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
           LLD  GH+++SD GL      KK H +             + ++    +D+         
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
               + PF      +T  K    R TL    E+P   S E R  +      + +RRLG  
Sbjct: 384 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
            RG +E+K      FFR +DW  +   +  P  IP   +V + D  D  +FD  D   +K
Sbjct: 441 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 497
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
           L      L  D E+     + I+  +++  A + F+   + T+ ++++++ ++
Sbjct: 498 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKN 544

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
           +++VGT  Y+APEV LQ G  Y  +ADW+SLG +++++L     F Q
Sbjct: 348 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S R      L    P                       
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 82  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S R      L    P                      +
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 85  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 144
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 145 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 205 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 258
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 259 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 301

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 204

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 83  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 142
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 143 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 203 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 256
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 257 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 299

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 202

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 80  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
           LLL + G +K++DFG       S R      L    P                      +
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           F    PPF +   QETY+++   R    FP  V  +E AR+ I R 
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 241

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78  ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
             GHIK++DFGLC         +K    T  Y      + +D+                 
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG   G  
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
           + K +   +FF  ++W  + ++    P   QV S  DT  FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 79  DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPEN 138
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL + G +K++DFG       S R      L    P                       
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
                PPF +   Q+TY+++   R    FP  V  +E AR+ I R 
Sbjct: 199 FLVGKPPFEANTYQDTYKRIS--RVEFTFPDFV--TEGARDLISRL 240

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            D  +++++++ L GGD+   L +     EE  + +I E  +A+D +     IHRD+KPD
Sbjct: 85  QDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPD 144
Query: 73  NLLLDARGHIKLSDFGLCTGL 93
           N+LLD  GH+ ++DF +   L
Sbjct: 145 NILLDEHGHVHITDFNIAAML 165

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 275 RRALAYSTVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEML 316
           R     +  GT  Y+APE+F      GY  A DWWSLGV  YE+L
Sbjct: 167 RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  N YL+ME   GG++   ++ +   +E      I +    +  +HK   +HRD+KP+N
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN 166
Query: 74  LLLDAR---GHIKLSDFGLCT------GLKKSHRTDFY------RDLSQAKPSDFS---- 114
           LLL+++     IK+ DFGL         +K+   T +Y      R     K   +S    
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVI 226
Query: 115 -------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
                  YPPF  +  QE  RKV   + T   P    +SE A++ I +    +  RR+ +
Sbjct: 227 LFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA 286
Query: 167 ARGVE 171
            + +E
Sbjct: 287 QQALE 291

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 79  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLLD 
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79  RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           R ++K+SDFGL T  + ++R      +    P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YL++EF P G++   L K     E+ +  ++ E A A+   H+   IHRDIKP+N
Sbjct: 85  DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 144
Query: 74  LLLDARGHIKLSDFG------------LCTGLK---------KSHRTDFYRDLSQAKPSD 112
           LL+  +G +K++DFG            +C  L          K+H  D   DL  A    
Sbjct: 145 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLC 202
Query: 113 FSY----PPFCSENPQETYRKVMSWRDTLVFPP 141
           + +    PPF S +  ET+R++++    L FPP
Sbjct: 203 YEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP 233

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YL++EF P G++   L K     E+ +  ++ E A A+   H+   IHRDIKP+N
Sbjct: 86  DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 145
Query: 74  LLLDARGHIKLSDFG------------LCTGLK---------KSHRTDFYRDLSQAKPSD 112
           LL+  +G +K++DFG            +C  L          K+H  D   DL  A    
Sbjct: 146 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLC 203
Query: 113 FSY----PPFCSENPQETYRKVMSWRDTLVFPP 141
           + +    PPF S +  ET+R++++    L FPP
Sbjct: 204 YEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP 234

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +S P +++++ME++ GG++   + K   L E+ ++    +    +D  H+   +HRD+KP
Sbjct: 85  ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKP 144
Query: 72  DNLLLDARGHIKLSDFGL 89
           +N+LLDA  + K++DFGL
Sbjct: 145 ENVLLDAHMNAKIADFGL 162

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 28/167 (16%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPD 72
           D    YL+ EF  GG++   ++ +    +EC    I +  L+ I  +HK   +HRDIKP+
Sbjct: 117 DKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYLHKHNIVHRDIKPE 175
Query: 73  NLLLDARG---HIKLSDFGLCTGLKKSHR------TDFYR--DLSQAKPSD--------- 112
           N+LL+ +    +IK+ DFGL +   K ++      T +Y   ++ + K ++         
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGV 235
Query: 113 ------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
                   YPPF  +N Q+  +KV   +    F     IS+EA+E I
Sbjct: 236 IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI 282

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 117 LWVVMEFLEGG-ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 78  ARGHIKLSDFGLCTGLKK 95
           + G IKLSDFG C  + K
Sbjct: 176 SDGRIKLSDFGFCAQVSK 193

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 223 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 281
Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 282 HDGRVKLSDFGFCAQVSK 299

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +LY++ E +  G +M +   K  LSE+  +FY  +    I+ +H    IHRDIKP NLL+
Sbjct: 112 HLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170
Query: 77  DARGHIKLSDFGLCTGLKKS 96
              GHIK++DFG+    K S
Sbjct: 171 GEDGHIKIADFGVSNEFKGS 190

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +S P + +++ME++ GG++   + K   + E   +    +   A+D  H+   +HRD+KP
Sbjct: 80  ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
           +N+LLDA  + K++DFGL   +      +F RD
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDG---EFLRD 169

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 1   MKDYACLKQLRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAI 56
           M+DY     + M         L+++MEFL GG  +T ++ +  L+EE           A+
Sbjct: 96  MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG-ALTDIVSQVRLNEEQIATVCEAVLQAL 154
Query: 57  DSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
             +H  G IHRDIK D++LL   G +KLSDFG C  + K
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 101 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 159
Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 160 HDGRVKLSDFGFCAQVSK 177

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 103 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 161
Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 162 HDGRVKLSDFGFCAQVSK 179

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 146 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 204
Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 205 HDGRVKLSDFGFCAQVSK 222

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 92  LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 150
Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 151 HDGRVKLSDFGFCAQVSK 168

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+++MEFL GG  +T ++    ++EE           A+  +H  G IHRDIK D++LL 
Sbjct: 96  LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 154
Query: 78  ARGHIKLSDFGLCTGLKK 95
             G +KLSDFG C  + K
Sbjct: 155 HDGRVKLSDFGFCAQVSK 172

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APE+  +  YGP  D WSLG+++ EM+
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +S P + +++ME++ GG++   + K   + E   +    +   A+D  H+   +HRD+KP
Sbjct: 80  ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 72  DNLLLDARGHIKLSDFGL 89
           +N+LLDA  + K++DFGL
Sbjct: 140 ENVLLDAHMNAKIADFGL 157

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P +LYL+M+ + GG++   +++K   +E+     I +   A+  +H++G +HRD+KP+NL
Sbjct: 92  PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 75  LL---DARGHIKLSDFGL 89
           L    D    I +SDFGL
Sbjct: 152 LYYSQDEESKIMISDFGL 169

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 32/176 (18%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I+     YL+ + + GG++   ++ ++  SE      I +   A+   H++G +
Sbjct: 66  VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 125
Query: 66  HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
           HRD+KP+NLLL ++     +KL+DFGL   ++   +              +  R  +  K
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
           P D              YPPF  E+  + Y+++ +       P    ++ EA+  I
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 241

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L+ 
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 43/258 (16%)
Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M +    E    FY AE    ++ +H+   ++RD+KP+N+L
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 76  LDARGHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSYPP------------ 117
           LD  GHI++SD GL   + +         T  Y      K   +++ P            
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 118 FCSENPQETYRKVMSWRDTLVFPPEVP------ISEEARETIVR-FCSECDRRL----GS 166
              ++P +  +K +   +      EVP       S +AR    +  C +   RL    GS
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGS 438
Query: 167 ARGVEELKSLGACQFFR-GVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLE------ 219
           AR V+E        F R G        +P    +  K + D   F     V+LE      
Sbjct: 439 AREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDF 498
Query: 220 -----IPSAPLPQDGEII 232
                  S P+P   E++
Sbjct: 499 YQKFATGSVPIPWQNEMV 516

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
           VGT  Y+APEV     Y  + DWW+LG ++YEM+     F Q
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            +L+ + +  G++   L +K TLSE+ T+  +      I ++HKL  +HRD+KP+N+LLD
Sbjct: 99  FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 78  ARGHIKLSDFGLCTGL 93
              +IKL+DFG    L
Sbjct: 159 DDMNIKLTDFGFSCQL 174

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            +L+ + +  G++   L +K TLSE+ T+  +      I ++HKL  +HRD+KP+N+LLD
Sbjct: 99  FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 78  ARGHIKLSDFGLCTGL 93
              +IKL+DFG    L
Sbjct: 159 DDMNIKLTDFGFSCQL 174

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 281 STVGTPDYIAPEVFL------QTGYGPAADWWSLGVIMYEML 316
           S  GTP Y+APE+          GYG   D WS GVIMY +L
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            +L+ + +  G++   L +K TLSE+ T+  +      I ++HKL  +HRD+KP+N+LLD
Sbjct: 86  FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 78  ARGHIKLSDFGLCTGL 93
              +IKL+DFG    L
Sbjct: 146 DDMNIKLTDFGFSCQL 161

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 10  LRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I    + YLI + + GG++   ++ ++  SE      I +   A+   H++G +
Sbjct: 84  VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 66  HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
           HRD+KP+NLLL ++     +KL+DFGL   ++   +              +  R     K
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
           P D              YPPF  E+    Y+++ +       P    ++ EA++ I +  
Sbjct: 204 PVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 263
Query: 158 S 158
           +
Sbjct: 264 T 264

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L+ 
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 198 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 287

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++  L        +GY P ++
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL--------SGYPPFSE 346

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 212 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 301

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++  L        +GY P ++
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL--------SGYPPFSE 360

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 73  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 43/258 (16%)
Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M +    E    FY AE    ++ +H+   ++RD+KP+N+L
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 76  LDARGHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSYPP------------ 117
           LD  GHI++SD GL   + +         T  Y      K   +++ P            
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 118 FCSENPQETYRKVMSWRDTLVFPPEVP------ISEEARETIVR-FCSECDRRL----GS 166
              ++P +  +K +   +      EVP       S +AR    +  C +   RL    GS
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGS 438
Query: 167 ARGVEELKSLGACQFFR-GVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLE------ 219
           AR V+E        F R G        +P    +  K + D   F     V+LE      
Sbjct: 439 AREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDF 498
Query: 220 -----IPSAPLPQDGEII 232
                  S P+P   E++
Sbjct: 499 YQKFATGSVPIPWQNEMV 516

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
           VGT  Y+APEV     Y  + DWW+LG ++YEM+     F Q
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  N YL+ME   GG++   ++ +   SE      + +       +HK   +HRD+KP+N
Sbjct: 92  DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPEN 151
Query: 74  LLLDARGH---IKLSDFGLC----TGLKKSHR--TDFY------RDLSQAKPSDFS---- 114
           LLL+++     IK+ DFGL      G K   R  T +Y      R     K   +S    
Sbjct: 152 LLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVI 211
Query: 115 -------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
                  YPPF  +  QE  ++V   + +   P    +S+EA++ +
Sbjct: 212 LYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 73  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 72  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 161

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 73  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
           +LYLIM+ + GG++   +++K   +E      I +   A+  +H LG +HRD+KP+NLL 
Sbjct: 90  HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76  --LDARGHIKLSDFGL 89
             LD    I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3   DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
           ++ C+ +++   D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+
Sbjct: 79  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 62  LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
            G IHRD+KP+N+LL ++     IK++DFG
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 168

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
           +L  +  GTP Y+APEV +  G   Y  A D WSLGVI++
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 17  NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L+L+MEF   G +  L+   K +TL EE   +   E    +  +H+   IHRDIK  N+
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 160
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF--------CSENPQET 126
           LL     +KL DFG+   L          D +  + + F   P+        C ENP  T
Sbjct: 161 LLTENAEVKLVDFGVSAQL----------DRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 127 Y 127
           Y
Sbjct: 211 Y 211

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
           +LYLIM+ + GG++   +++K   +E      I +   A+  +H LG +HRD+KP+NLL 
Sbjct: 90  HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76  --LDARGHIKLSDFGL 89
             LD    I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 1   MKDYACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           + + A LKQL             D  N YL+ME   GG++   ++ +   SE      + 
Sbjct: 52  LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGH---IKLSDFGLC----TGLKKSHR--TDF 101
           +       +HK   +HRD+KP+NLLL+++     IK+ DFGL      G K   R  T +
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 171
Query: 102 Y------RDLSQAKPSDFS-----------YPPFCSENPQETYRKVMSWRDTLVFPPEVP 144
           Y      R     K   +S           YPPF  +  QE  ++V   + +   P    
Sbjct: 172 YIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
Query: 145 ISEEARETI 153
           +S+EA++ +
Sbjct: 232 VSDEAKQLV 240

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
           +LYLIM+ + GG++   +++K   +E      I +   A+  +H LG +HRD+KP+NLL 
Sbjct: 90  HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76  --LDARGHIKLSDFGL 89
             LD    I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 11  RMSDPIN--LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG- 63
           R+ D  N  LY++ME+  GGD+ +++ K    +  L EE     + +  LA+   H+   
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 64  ----FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
                +HRD+KP N+ LD + ++KL DFGL   L  +H  DF ++
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKE 175

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
           +LYLIM+ + GG++   +++K   +E      I +   A+  +H LG +HRD+KP+NLL 
Sbjct: 90  HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76  --LDARGHIKLSDFGL 89
             LD    I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 11  RMSDPIN--LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG- 63
           R+ D  N  LY++ME+  GGD+ +++ K    +  L EE     + +  LA+   H+   
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 64  ----FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDF 101
                +HRD+KP N+ LD + ++KL DFGL   L  +H T F
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 11  RMSDPIN--LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG- 63
           R+ D  N  LY++ME+  GGD+ +++ K    +  L EE     + +  LA+   H+   
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 64  ----FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDF 101
                +HRD+KP N+ LD + ++KL DFGL   L  +H T F
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           ++ P ++ +++E+  GG++   +++K  ++E+  + +  +   AI+  H+   +HRD+KP
Sbjct: 78  ITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP 136
Query: 72  DNLLLDARGHIKLSDFGLCT 91
           +NLLLD   ++K++DFGL  
Sbjct: 137 ENLLLDDNLNVKIADFGLSN 156

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 10  LRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I    + YLI + + GG++   ++ ++  SE      I +   A+   H++G +
Sbjct: 73  VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 132
Query: 66  HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
           HR++KP+NLLL ++     +KL+DFGL   ++   +              +  R     K
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
           P D              YPPF  E+    Y+++ +       P    ++ EA++ I +  
Sbjct: 193 PVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 252
Query: 158 S 158
           +
Sbjct: 253 T 253

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L+ 
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLIME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 89  LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 148
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG         + D +
Sbjct: 149 ADMNIKIADFGFSNEFTVGGKLDAF 173

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 88  LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG        ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTF 172

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 88  LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG        ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTF 172

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 88  LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG        ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDAF 172

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D ++ +L+ME L GG++   + KK   SE    + + +   A+  +H +G +HRD+KP+N
Sbjct: 77  DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136
Query: 74  LLLDARG---HIKLSDFGL 89
           LL         IK+ DFG 
Sbjct: 137 LLFTDENDNLEIKIIDFGF 155

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           T  Y APE+  Q GY  + D WSLGVI+Y ML
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTML 203

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 88  LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG        ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTF 172

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLIME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 86  LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 145
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG         + D +
Sbjct: 146 ADMNIKIADFGFSNEFTVGGKLDTF 170

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 88  LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78  ARGHIKLSDFGLCTGLKKSHRTD 100
           A  +IK++DFG        ++ D
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLD 170

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 13/91 (14%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A++ +H    IHRDIK D
Sbjct: 92  LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 73  NLLLDARGHIKLSDFGLCTGL--KKSHRTDF 101
           N+LL   G +KL+DFG C  +  ++S R++ 
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSEM 176

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D  + YL+M F+  G  +  LMK + L E+  QF + +    +  IH  G IHRD+KP
Sbjct: 99  LDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKP 156
Query: 72  DNLLLDARGHIKLSDFGLC 90
            NL ++    +K+ DFGL 
Sbjct: 157 GNLAVNEDCELKILDFGLA 175

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +L L+M  + GGD+   +   D       E    FY A+    ++ +H+   I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73  NLLLDARGHIKLSDFGLCTGLKKSH 97
           N+LLD  G++++SD GL   LK   
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 32/176 (18%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I+     YL+ + + GG++   ++ ++  SE      I +   +++ IH+   +
Sbjct: 93  VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIV 152
Query: 66  HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
           HRD+KP+NLLL ++     +KL+DFGL   ++   +              +  R     K
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGK 212
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
           P D              YPPF  E+  + Y+++ +       P    ++ EA+  I
Sbjct: 213 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 268

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L+ 
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +L L+M  + GGD+   +   D       E    FY A+    ++ +H+   I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73  NLLLDARGHIKLSDFGLCTGLKKSH 97
           N+LLD  G++++SD GL   LK   
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +L L+M  + GGD+   +   D       E    FY A+    ++ +H+   I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73  NLLLDARGHIKLSDFGLCTGLKKSH 97
           N+LLD  G++++SD GL   LK   
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 89  LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLD 148
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
              +IK++DFG        ++ D +
Sbjct: 149 GDMNIKIADFGFSNEFTVGNKLDTF 173

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           +L L+M  + GGD+   +   D       E    FY A+    ++ +H+   I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73  NLLLDARGHIKLSDFGLCTGLKKSH 97
           N+LLD  G++++SD GL   LK   
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D  + Y++ E   GG++   ++K+   SE      I +    I  +HK   +HRD+KP
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 72  DNLLLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFS-- 114
           +N+LL+++     IK+ DFGL T  +++ +      T +Y      R     K   +S  
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAG 209
Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
                     PPF  +N  +  ++V + +     P    IS++A++ I +  +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D  + Y++ E   GG++   ++K+   SE      I +    I  +HK   +HRD+KP
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 72  DNLLLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFS-- 114
           +N+LL+++     IK+ DFGL T  +++ +      T +Y      R     K   +S  
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAG 209
Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
                     PPF  +N  +  ++V + +     P    IS++A++ I +  +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            YL+ E + GG +++ + K+   +E      + + A A+D +H  G  HRD+KP+N+L +
Sbjct: 86  FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 78  ARGH---IKLSDFGLCTGLK 94
                  +K+ DFGL +G+K
Sbjct: 146 HPNQVSPVKICDFGLGSGIK 165

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+Q+   + I L+          LI+E + GG++   L +K++LSEE    +I +
Sbjct: 64  REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
               ++ +H     H D+KP+N++L  +     HIKL DFGL 
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+Q+   + I L+          LI+E + GG++   L +K++LSEE    +I +
Sbjct: 64  REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
               ++ +H     H D+KP+N++L  +     HIKL DFGL 
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+Q+   + I L+          LI+E + GG++   L +K++LSEE    +I +
Sbjct: 64  REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
               ++ +H     H D+KP+N++L  +     HIKL DFGL 
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+Q+   + I L+          LI+E + GG++   L +K++LSEE    +I +
Sbjct: 64  REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
               ++ +H     H D+KP+N++L  +     HIKL DFGL 
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I+     YL+ + + GG++   ++ ++  SE      I +   +++  H  G +
Sbjct: 66  VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 66  HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
           HRD+KP+NLLL ++     +KL+DFGL   ++   +              +  R     K
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
           P D              YPPF  E+    Y+++ +       P    ++ EA++ I +  
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 158 S 158
           +
Sbjct: 246 T 246

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L+ 
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A++ +H    IHRDIK D
Sbjct: 93  LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 146
Query: 73  NLLLDARGHIKLSDFGLCTGL 93
           N+LL   G +KL+DFG C  +
Sbjct: 147 NILLGMDGSVKLTDFGFCAQI 167

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+Q+   + I L+          LI+E + GG++   L +K++LSEE    +I +
Sbjct: 64  REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
               ++ +H     H D+KP+N++L  +     HIKL DFGL 
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           ++L+ + +  G++   L +K  LSE+ T+  +     A+  +H    +HRD+KP+N+LLD
Sbjct: 175 MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 78  ARGHIKLSDFGLCTGLK 94
               I+LSDFG    L+
Sbjct: 235 DNMQIRLSDFGFSCHLE 251

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I+     YL+ + + GG++   ++ ++  SE      I +   +++  H  G +
Sbjct: 66  VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 66  HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
           HRD+KP+NLLL ++     +KL+DFGL   ++   +              +  R     K
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
           P D              YPPF  E+    Y+++ +       P    ++ EA++ I +  
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 158 S 158
           +
Sbjct: 246 T 246

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L+ 
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A++ +H    IHRDIK D
Sbjct: 92  LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 73  NLLLDARGHIKLSDFGLCTGL 93
           N+LL   G +KL+DFG C  +
Sbjct: 146 NILLGMDGSVKLTDFGFCAQI 166

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A++ +H    IHRDIK D
Sbjct: 92  LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 73  NLLLDARGHIKLSDFGLCTGL 93
           N+LL   G +KL+DFG C  +
Sbjct: 146 NILLGMDGSVKLTDFGFCAQI 166

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           M++   LKQLR  + +NL          YL+ EF+    +  L +  + L  +  Q Y+ 
Sbjct: 72  MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL 93
           +    I   H    IHRDIKP+N+L+   G +KL DFG    L
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ME+  GG++   L+    + E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 81  LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 140
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG        ++ D +
Sbjct: 141 ADMNIKIADFGFSNEFTFGNKLDTF 165

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEFL-PGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E + P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 85  PDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 145 ILIDLNRGELKLIDFGSGALLKDTVYTDF 173

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D  + Y++ E   GG++   ++K+   SE      I +    I  +HK   +HRD+KP
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 72  DNLLLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFS-- 114
           +N+LL+++     IK+ DFGL T  +++ +      T +Y      R     K   +S  
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAG 209
Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
                     PPF  +N  +  ++V + +     P    IS++A++ I +  +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+ LR    I LY          +++E+  G ++   ++++D +SE+  + +  +
Sbjct: 62  REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
              A++  H+   +HRD+KP+NLLLD   ++K++DFGL  
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 160

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D    YL+ E L GG ++  + K+   +E      + + A A+D +H  G  HRD+KP+N
Sbjct: 82  DDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPEN 141
Query: 74  LLLDA---RGHIKLSDFGLCTGLK 94
           +L ++      +K+ DF L +G+K
Sbjct: 142 ILCESPEKVSPVKICDFDLGSGMK 165

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+ LR    I LY          +++E+  G ++   ++++D +SE+  + +  +
Sbjct: 63  REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 121
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
              A++  H+   +HRD+KP+NLLLD   ++K++DFGL  
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 161

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+ LR    I LY          +++E+  G ++   ++++D +SE+  + +  +
Sbjct: 53  REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 111
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
              A++  H+   +HRD+KP+NLLLD   ++K++DFGL  
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 151

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 3   DYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAET 52
           + A LK+++  + + L          YL+M+ + GG++   ++++   +E+     I + 
Sbjct: 56  EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 53  ALAIDSIHKLGFIHRDIKPDNLLL---DARGHIKLSDFGL 89
             A+  +H+ G +HRD+KP+NLL    +    I ++DFGL
Sbjct: 116 LSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           K  +  +  +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 157 KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +L+++ME+   G +  ++ ++  TL+E+     +  T   ++ +H +  IHRDIK  N+L
Sbjct: 98  DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL 157
Query: 76  LDARGHIKLSDFGLCTGL 93
           L+  GH KL+DFG+   L
Sbjct: 158 LNTEGHAKLADFGVAGQL 175

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + L+ LR    I LY          +++E+  G ++   ++++D +SE+  + +  +
Sbjct: 57  REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 115
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
              A++  H+   +HRD+KP+NLLLD   ++K++DFGL  
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 155

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL       H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++ LI+E + GG++   L +K++LSEE    +I +    ++ +H     H D+KP+N++L
Sbjct: 89  DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 77  DARG----HIKLSDFGLC 90
             +     HIKL DFGL 
Sbjct: 149 LDKNIPIPHIKLIDFGLA 166

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+L GG  + LL K   L E      + E    +D +H    IHRDIK  N+LL
Sbjct: 91  KLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL 149
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
             +G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 150 SEQGDVKLADFGVAGQL-----TD-----TQIKRNXFVGTPF 181

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 62  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL       H+ DF  +   
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 175
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 176 I----FGTPEFVA 184

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 62  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL       H+ DF  +   
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 175
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 176 I----FGTPEFVA 184

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPAFVA 185

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI+E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL      +H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
           L+++ME+L GG +       D ++E C  +  IA    E   A++ +H    IHR+IK D
Sbjct: 93  LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSD 146
Query: 73  NLLLDARGHIKLSDFGLCTGL 93
           N+LL   G +KL+DFG C  +
Sbjct: 147 NILLGMDGSVKLTDFGFCAQI 167

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ E+  GG++   L+      E+  +    +   A+   H+   +HRD+K +NLLLD
Sbjct: 88  LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
           A  +IK++DFG        ++ D +
Sbjct: 148 ADXNIKIADFGFSNEFTFGNKLDAF 172

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D    YL+ E   GG++   ++ +   SE      I +    I  +HK   +HRD+KP+N
Sbjct: 103 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 162
Query: 74  LLLDAR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY--- 115
           LLL+++    +I++ DFGL T  + S +      T +Y            K   +S    
Sbjct: 163 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 222
Query: 116 --------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
                   PPF   N  +  +KV   + T   P    +SE A++ I +  +
Sbjct: 223 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 273

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 85  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 145 ILIDLNRGELKLIDFGSGALLKDTVYTDF 173

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 84  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 143
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 144 ILIDLNRGELKLIDFGSGALLKDTVYTDF 172

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+L GG  + LL +   L E      + E    +D +H    IHRDIK  N+LL
Sbjct: 79  KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
              G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 138 SEHGEVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 169

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 86  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTVYTDF 174

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 86  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTVYTDF 174

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 81  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 140
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTVYTDF 169

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+L GG  + LL +   L E      + E    +D +H    IHRDIK  N+LL
Sbjct: 94  KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 152
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
              G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 153 SEHGEVKLADFGVAGQL-----TD-----TQIKRNXFVGTPF 184

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 86  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTVYTDF 174

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 81  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDEN 140
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTVYTDF 169

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+L GG  + LL +   L E      + E    +D +H    IHRDIK  N+LL
Sbjct: 79  KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
              G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 138 SEHGEVKLADFGVAGQL-----TD-----TQIKRNXFVGTPF 169

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++   LKQL   + + LY          L+ E   GG++   ++ +   SE      I 
Sbjct: 98  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 157
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHR------TDF 101
           +    I  +HK   +HRD+KP+NLLL+++    +I++ DFGL T  + S +      T +
Sbjct: 158 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 217
Query: 102 Y------RDLSQAKPSDFSY-----------PPFCSENPQETYRKVMSWRDTLVFPPEVP 144
           Y            K   +S            PPF   N  +  +KV   + T   P    
Sbjct: 218 YIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 277
Query: 145 ISEEARETIVRFCS 158
           +SE A++ I +  +
Sbjct: 278 VSESAKDLIRKMLT 291

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            YL+ E   GG++   ++ +   SE      I +    I  +HK   +HRD+KP+NLLL+
Sbjct: 124 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLE 183
Query: 78  AR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY------- 115
           ++    +I++ DFGL T  + S +      T +Y            K   +S        
Sbjct: 184 SKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYIL 243
Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
               PPF   N  +  +KV   + T   P    +SE A++ I +  +
Sbjct: 244 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 290

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 100 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 159
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 160 ILIDLNRGELKLIDFGSGALLKDTVYTDF 188

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 81  PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 140
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTVYTDF 169

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 100 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 159
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 160 ILIDLNRGELKLIDFGSGALLKDTVYTDF 188

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 7   LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIH 66
           L  LR  +  ++YL+ +++     +  +++ + L     Q+ + +    I  +H  G +H
Sbjct: 75  LNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLH 132
Query: 67  RDIKPDNLLLDARGHIKLSDFGL 89
           RD+KP N+LL+A  H+K++DFGL
Sbjct: 133 RDMKPSNILLNAECHVKVADFGL 155

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL++++EF  GG +  ++++ +  L+E   Q    +T  A++ +H    IHRD+K  N+L
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 167
Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
               G IKL+DFG+     K+ RT   RD
Sbjct: 168 FTLDGDIKLADFGVSA---KNTRTIQRRD 193

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 101 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTVYTDF 189

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 101 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTVYTDF 189

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 101 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTVYTDF 189

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+L+ A
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 79  RGHIKLSDFGLCTGLKKS 96
              +K+ DFG+   +  S
Sbjct: 152 TNAVKVVDFGIARAIADS 169

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 108 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 167
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 168 ILIDLNRGELKLIDFGSGALLKDTVYTDF 196

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            YL+ E   GG++   ++ +   SE      I +    I  +HK   +HRD+KP+NLLL+
Sbjct: 101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLE 160
Query: 78  AR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY------- 115
           ++    +I++ DFGL T  + S +      T +Y            K   +S        
Sbjct: 161 SKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYIL 220
Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
               PPF   N  +  +KV   + T   P    +SE A++ I +  +
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 267

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 128 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTVYTDF 216

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 179
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 180 ILIDLNRGELKLIDFGSGALLKDTVYTDF 208

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+L GG  + LL +   L E      + E    +D +H    IHRDIK  N+LL
Sbjct: 99  KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 157
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
              G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 158 SEHGEVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 189

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 128 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTVYTDF 216

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 128 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTVYTDF 216

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
           ++ + LK+++  + I L+          LI E + GG++   L +K++L+EE    ++ +
Sbjct: 63  REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +  +H L   H D+KP+N++L  R      IK+ DFGL       H+ DF  +   
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
                F  P F +
Sbjct: 177 I----FGTPEFVA 185

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            YL+ E + GG +++ + K+   +E      + + A A+D +H  G  HRD+KP+N+L +
Sbjct: 86  FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 78  ARGH---IKLSDFGLCTGLK 94
                  +K+ DF L +G+K
Sbjct: 146 HPNQVSPVKICDFDLGSGIK 165

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15  PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK +N
Sbjct: 133 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 192
Query: 74  LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
           +L+D  RG +KL DFG    LK +  TDF
Sbjct: 193 ILIDLNRGELKLIDFGSGALLKDTVYTDF 221

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  ++YL+ E + GG+++  ++++   SE    F +      ++ +H  G +HRD+KP N
Sbjct: 92  DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 74  LL-LDARGH---IKLSDFGLCTGLK 94
           +L +D  G+   +++ DFG    L+
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLR 176

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           T +++APEV  + GY    D WSLG+++Y ML         GY P A+
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTML--------AGYTPFAN 227

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  ++YL+ E + GG+++  ++++   SE    F +      ++ +H  G +HRD+KP N
Sbjct: 92  DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 74  LL-LDARGH---IKLSDFGLCTGLK 94
           +L +D  G+   +++ DFG    L+
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLR 176

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           T +++APEV  + GY    D WSLG+++Y ML         GY P A+
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTML--------AGYTPFAN 227

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L++IME+L GG  + LL +     E      + E    +D +H    IHRDIK  N+LL 
Sbjct: 96  LWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
            +G +KL+DFG+   L     TD     +Q K + F   PF
Sbjct: 155 EQGDVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 185

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 26/162 (16%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            YL+ E   GG++   ++ +   SE      I +    I   HK   +HRD+KP+NLLL+
Sbjct: 101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLE 160
Query: 78  AR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY------- 115
           ++    +I++ DFGL T  + S +      T +Y            K   +S        
Sbjct: 161 SKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYIL 220
Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
               PPF   N  +  +KV   + T   P    +SE A++ I
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G++   L K  T  E+ T   + E A A+   H    IHRDIKP+N
Sbjct: 94  DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
           LLL  +G +K++DFG         R      L    P                       
Sbjct: 154 LLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYE 213
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEE 148
                PPF S +  ETYR+++  +  L FP  VP   +
Sbjct: 214 LLVGNPPFESASHNETYRRIV--KVDLKFPASVPTGAQ 249

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ A
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79  RGHIKLSDFGLCTGLKKS 96
              +K+ DFG+   +  S
Sbjct: 152 TNAVKVMDFGIARAIADS 169

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ A
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79  RGHIKLSDFGLCTGLKKS 96
              +K+ DFG+   +  S
Sbjct: 152 TNAVKVMDFGIARAIADS 169

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ A
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79  RGHIKLSDFGLCTGLKKS 96
              +K+ DFG+   +  S
Sbjct: 152 TNAVKVMDFGIARAIADS 169

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ A
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79  RGHIKLSDFGLCTGLKKS 96
              +K+ DFG+   +  S
Sbjct: 152 TNAVKVMDFGIARAIADS 169

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL++++EF  GG +  ++++ +  L+E   Q    +T  A++ +H    IHRD+K  N+L
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 167
Query: 76  LDARGHIKLSDFGL 89
               G IKL+DFG+
Sbjct: 168 FTLDGDIKLADFGV 181

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L++++EF PGG +  ++++ D  L+E   Q    +   A++ +H    IHRD+K  N+L
Sbjct: 90  KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL 149
Query: 76  LDARGHIKLSDFGL-CTGLKKSHRTDFY 102
           +   G I+L+DFG+    LK   + D +
Sbjct: 150 MTLEGDIRLADFGVSAKNLKTLQKRDSF 177

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL++++EF  GG +  ++++ +  L+E   Q    +T  A++ +H    IHRD+K  N+L
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 167
Query: 76  LDARGHIKLSDFGL 89
               G IKL+DFG+
Sbjct: 168 FTLDGDIKLADFGV 181

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ A
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 79  RGHIKLSDFGLCTGLKKS 96
              +K+ DFG+   +  S
Sbjct: 169 TNAVKVMDFGIARAIADS 186

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L++++EF PGG +  ++++ D  L+E   Q    +   A++ +H    IHRD+K  N+L
Sbjct: 82  KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL 141
Query: 76  LDARGHIKLSDFGL-CTGLKKSHRTDFY 102
           +   G I+L+DFG+    LK   + D +
Sbjct: 142 MTLEGDIRLADFGVSAKNLKTLQKRDSF 169

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY+++E +   D+  L      L+EE  +  +    L  + IH+ G IHRD+KP N LL+
Sbjct: 105 LYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
               +K+ DFGL   +     T+   DL +
Sbjct: 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEE 193

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGLC
Sbjct: 159 NEDSELKILDFGLC 172

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 25  LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIK 83
           LP  D+   + +K  L E  ++ +  +   AI   H  G +HRDIK +N+L+D  RG  K
Sbjct: 121 LPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK 180
Query: 84  LSDFGLCTGLKKSHRTDF 101
           L DFG    L     TDF
Sbjct: 181 LIDFGSGALLHDEPYTDF 198

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I      YL+ + + GG++   ++ ++  SE      I +   +I   H  G +
Sbjct: 67  VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 126
Query: 66  HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
           HR++KP+NLLL ++     +KL+DFGL   +  S
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 160

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I      YL+ + + GG++   ++ ++  SE      I +   +I   H  G +
Sbjct: 68  VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 66  HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
           HR++KP+NLLL ++     +KL+DFGL   +  S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I      YL+ + + GG++   ++ ++  SE      I +   +I   H  G +
Sbjct: 68  VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 66  HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
           HR++KP+NLLL ++     +KL+DFGL   +  S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   + LI+EFL GG++   +  +D  +SE     Y+ +    +  +H+   +H DIKP+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 73  NLLLDAR--GHIKLSDFGLCTGL 93
           N++ + +    +K+ DFGL T L
Sbjct: 179 NIMCETKKASSVKIIDFGLATKL 201

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y+I E +     +  ++    LS++  Q++I +T  A+  +H    IHRD+KP NLL++
Sbjct: 89  VYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 78  ARGHIKLSDFGLCTGLKKS 96
           +   +K+ DFGL   + +S
Sbjct: 147 SNCDLKVCDFGLARIIDES 165

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y+I E +     +  ++    LS++  Q++I +T  A+  +H    IHRD+KP NLL++
Sbjct: 89  VYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 78  ARGHIKLSDFGLCTGLKKS 96
           +   +K+ DFGL   + +S
Sbjct: 147 SNCDLKVCDFGLARIIDES 165

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y+I E +     +  ++    LS++  Q++I +T  A+  +H    IHRD+KP NLL++
Sbjct: 89  VYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 78  ARGHIKLSDFGLCTGLKKS 96
           +   +K+ DFGL   + +S
Sbjct: 147 SNCDLKVCDFGLARIIDES 165

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 18  LYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           LY++ EF+ G D+   ++K+       SE     Y+ +   A+   H    IHRD+KP+N
Sbjct: 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPEN 160
Query: 74  LLLDARGH---IKLSDFGLCTGLKKS 96
           +LL ++ +   +KL DFG+   L +S
Sbjct: 161 VLLASKENSAPVKLGDFGVAIQLGES 186

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D   +YL+   + G D+  ++ K   LS+E  QF + +    +  IH  G IHRD+KP
Sbjct: 102 IEDFSEVYLVTTLM-GADLNNIV-KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 159
Query: 72  DNLLLDARGHIKLSDFGLC 90
            N+ ++    +++ DFGL 
Sbjct: 160 SNVAVNEDSELRILDFGLA 178

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10  LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
           +R+ D I      YL+ + + GG++   ++ ++  SE      I +   +I   H  G +
Sbjct: 91  VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 150
Query: 66  HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
           HR++KP+NLLL ++     +KL+DFGL   +  S
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 18  LYLIMEFLPGGDMMTLL--------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           L+L+M+ L GG ++ ++         K   L E      + E    ++ +HK G IHRD+
Sbjct: 83  LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 142
Query: 70  KPDNLLLDARGHIKLSDFGL 89
           K  N+LL   G ++++DFG+
Sbjct: 143 KAGNILLGEDGSVQIADFGV 162

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 18  LYLIMEFLPGGDMMTLL--------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           L+L+M+ L GG ++ ++         K   L E      + E    ++ +HK G IHRD+
Sbjct: 88  LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 147
Query: 70  KPDNLLLDARGHIKLSDFGL 89
           K  N+LL   G ++++DFG+
Sbjct: 148 KAGNILLGEDGSVQIADFGV 167

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 16  INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +N++  ME L GG +  L+ ++  L E+   +Y+ +    ++ +H    +H D+K DN+L
Sbjct: 160 VNIF--MELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVL 217
Query: 76  LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
           L + G H  L DFG  +C    GL KS  T  Y
Sbjct: 218 LSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +YL++E    G+M   L  +    SE   + ++ +    +  +H  G +HRD+   NLLL
Sbjct: 86  VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDF 101
               +IK++DFGL T LK  H   +
Sbjct: 146 TRNMNIKIADFGLATQLKMPHEKHY 170

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
           I+++D    N    R       +F L++   M  ++             Y+  GTP+YI+
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH------------YTLCGTPNYIS 180
Query: 291 PEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           PE+  ++ +G  +D WSLG + Y +LI 
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIG 208

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL+ME++ G  +   +     LS +    +  +    I   H +  +HRDIKP N+L+D+
Sbjct: 87  YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146
Query: 79  RGHIKLSDFGLCTGLKKSHRT 99
              +K+ DFG+   L ++  T
Sbjct: 147 NKTLKIFDFGIAKALSETSLT 167

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  ++YL+ME   GG++   ++ K    E      + +   A+   HKL   HRD+KP+N
Sbjct: 77  DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN 136
Query: 74  LLL---DARGHIKLSDFGLCTGLK 94
            L         +KL DFGL    K
Sbjct: 137 FLFLTDSPDSPLKLIDFGLAARFK 160

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 14/69 (20%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI------AP---EVFLQTGYG--- 328
           + VGTP Y++P+V L+  YGP  D WS GV+MY +L       AP   EV L+   G   
Sbjct: 167 TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 225
Query: 329 -PAADWWSL 336
            P  DW ++
Sbjct: 226 FPEKDWLNV 234

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  ++YL+ME   GG++   ++ K    E      + +   A+   HKL   HRD+KP+N
Sbjct: 94  DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN 153
Query: 74  LLL---DARGHIKLSDFGLCTGLK 94
            L         +KL DFGL    K
Sbjct: 154 FLFLTDSPDSPLKLIDFGLAARFK 177

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 14/69 (20%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI------AP---EVFLQTGYG--- 328
           + VGTP Y++P+V L+  YGP  D WS GV+MY +L       AP   EV L+   G   
Sbjct: 184 TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 242
Query: 329 -PAADWWSL 336
            P  DW ++
Sbjct: 243 FPEKDWLNV 251

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 16  INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +N++  ME L GG +  L+ ++  L E+   +Y+ +    ++ +H    +H D+K DN+L
Sbjct: 141 VNIF--MELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVL 198
Query: 76  LDARG-HIKLSDFGLCTGLK 94
           L + G H  L DFG    L+
Sbjct: 199 LSSDGSHAALCDFGHAVCLQ 218

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D   +YL+   + G D+  ++ K   LS+E  QF + +    +  IH  G IHRD+KP
Sbjct: 102 IEDFSEVYLVTTLM-GADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 159
Query: 72  DNLLLDARGHIKLSDFGLC 90
            N+ ++    +++ DFGL 
Sbjct: 160 SNVAVNEDSELRILDFGLA 178

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++++ +   D+  ++     L+ E  ++++ +    +  +H    IHRD+KP NLL+
Sbjct: 134 SVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 192
Query: 77  DARGHIKLSDFGLCTGLKKS 96
           +    +K+ DFG+  GL  S
Sbjct: 193 NENCELKIGDFGMARGLCTS 212

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 48  YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL 93
           Y+ +T LA+  +H  G +H D+KP N+ L  RG  KL DFGL   L
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
           STVGTP YIAPEV L+  Y G  AD WS GV +Y ML+ 
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
           STVGTP YIAPEV L+  Y G  AD WS GV +Y ML+ 
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
           STVGTP YIAPEV L+  Y G  AD WS GV +Y ML+ 
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++++ +   D+  ++     L+ E  ++++ +    +  +H    IHRD+KP NLL+
Sbjct: 133 SVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 191
Query: 77  DARGHIKLSDFGLCTGLKKS 96
           +    +K+ DFG+  GL  S
Sbjct: 192 NENCELKIGDFGMARGLCTS 211

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 17  NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +LY++M++  GGD+   +   K     E+    +  +  LA+  +H    +HRDIK  N+
Sbjct: 97  SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156
Query: 75  LLDARGHIKLSDFGLCTGLKKS 96
            L   G ++L DFG+   L  +
Sbjct: 157 FLTKDGTVQLGDFGIARVLNST 178

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           LA + +GTP Y++PE+     Y   +D W+LG ++YE+      F
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF 225

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           P  + L++E + GG++   +++K   SE      + +   A+  +H+ G +HRD+KP+NL
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENL 179
Query: 75  LLDA---RGHIKLSDFGL 89
           L         +K++DFGL
Sbjct: 180 LYATPAPDAPLKIADFGL 197

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 275 RRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
            + L  +  GTP Y APE+     YGP  D WS+G+I Y +L   E F
Sbjct: 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           + D   +YL+   + G D+  ++ K   LS+E  QF + +    +  IH  G IHRD+KP
Sbjct: 94  IEDFSEVYLVTTLM-GADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 151
Query: 72  DNLLLDARGHIKLSDFGLC 90
            N+ ++    +++ DFGL 
Sbjct: 152 SNVAVNEDCELRILDFGLA 170

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
           STVGTP YIAPEV L+  Y G  AD WS GV +Y ML+ 
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           N+ L+ +F+     + +      L+    + Y+  T   ++ +H+   +HRD+KP+NLLL
Sbjct: 86  NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL 145
Query: 77  DARGHIKLSDFGLCTGLKKSHRT 99
           D  G +KL+DFGL       +R 
Sbjct: 146 DENGVLKLADFGLAKSFGSPNRA 168

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 141 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 198
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 234

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L L+ EF+       L   K  L +   + Y+ +    +   H+   +HRD+KP NLL++
Sbjct: 94  LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
Query: 78  ARGHIKLSDFGLC 90
           + G +KL+DFGL 
Sbjct: 154 SDGALKLADFGLA 166

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L L+ EF+       L   K  L +   + Y+ +    +   H+   +HRD+KP NLL++
Sbjct: 94  LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
Query: 78  ARGHIKLSDFGLC 90
           + G +KL+DFGL 
Sbjct: 154 SDGALKLADFGLA 166

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHKLGFIHRDIKPDNLL 75
           L++ ME+   G +  L+   + L+++  +++    +   A+  IH  G IHRD+KP N+ 
Sbjct: 90  LFIQMEYCENGTLYDLI-HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF 148
Query: 76  LDARGHIKLSDFGLCTGLKKS 96
           +D   ++K+ DFGL   + +S
Sbjct: 149 IDESRNVKIGDFGLAKNVHRS 169

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 79  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 79  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 79  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 79  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 79  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL-L 76
           +Y++ E + GG+++  ++++   SE      +      ++ +H  G +HRD+KP N+L +
Sbjct: 91  VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 77  DARGH---IKLSDFGLCTGLK 94
           D  G+   I++ DFG    L+
Sbjct: 151 DESGNPESIRICDFGFAKQLR 171

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           T +++APEV  + GY  A D WSLGV++Y ML        TGY P A+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTML--------TGYTPFAN 222

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 163
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 199

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  LL K   LS +   +++ +    +  IH    +HRD+KP NLLL
Sbjct: 120 DVYLVTHLM-GADLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 178 NTTXDLKICDFGLA 191

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + YL+M F+   D+  ++  K   SEE  Q+ + +    +  IH  G +HRD+KP NL +
Sbjct: 103 DFYLVMPFMQT-DLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 160 NEDCELKILDFGLA 173

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +  + I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 98  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 155
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 156 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 191

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +  + I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K  NL L+
Sbjct: 96  VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Query: 78  ARGHIKLSDFGLCTGLK 94
               +K+ DFGL T ++
Sbjct: 156 EDLEVKIGDFGLATKVE 172

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           +  GTP+YIAPEV  + G+    D WS+G IMY +L+    F
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K  NL L+
Sbjct: 92  VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 78  ARGHIKLSDFGLCTGLK 94
               +K+ DFGL T ++
Sbjct: 152 EDLEVKIGDFGLATKVE 168

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +  GTP+YIAPEV  + G+    D WS+G IMY +L+ 
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K  NL L+
Sbjct: 114 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Query: 78  ARGHIKLSDFGLCTGLK 94
               +K+ DFGL T ++
Sbjct: 174 EDLEVKIGDFGLATKVE 190

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPEV  + G+    D WS+G IMY +L+    F
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           K G IHRD+KP N+LLD RG IKL DFG+
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGI 171

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K  NL L+
Sbjct: 90  VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Query: 78  ARGHIKLSDFGLCTGLK 94
               +K+ DFGL T ++
Sbjct: 150 EDLEVKIGDFGLATKVE 166

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           GTP+YIAPEV  + G+    D WS+G IMY +L+ 
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++   LKQL+  + +NL          +L+ E+     +  L   +  + E   +    
Sbjct: 50  LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
           +T  A++  HK   IHRD+KP+N+L+     IKL DFG    L     +D+Y D
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDD 161

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
           TVGTP YIAPEV L+  Y G  AD WS GV +Y ML+ 
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K  NL L+
Sbjct: 116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Query: 78  ARGHIKLSDFGLCTGLK 94
               +K+ DFGL T ++
Sbjct: 176 EDLEVKIGDFGLATKVE 192

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPEV  + G+    D WS+G IMY +L+    F
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +  + I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K  NL L+
Sbjct: 92  VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 78  ARGHIKLSDFGLCTGLK 94
               +K+ DFGL T ++
Sbjct: 152 EDLEVKIGDFGLATKVE 168

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
           +  GTP+YIAPEV  + G+    D WS+G IMY +L+ 
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDXELKILDFGLA 172

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
           A+S VGTP Y++PE   + GY   +D WSLG ++YEM      F    YG   + +SL
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKMNLYSL 246

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
           S VGTP YIAPEV L+  Y G  AD WS GV +Y ML+ 
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + YL+M F+       + M+    SEE  Q+ + +    +  IH  G +HRD+KP NL +
Sbjct: 121 DFYLVMPFMQTDLQKIMGME---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 178 NEDCELKILDFGLA 191

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 3   DYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAE 51
           + + + QL  ++ I LY          L+ME++ GG++   ++ +   L+E  T  ++ +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195
Query: 52  TALAIDSIHKLGFIHRDIKPDNLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYRDLSQ-- 107
               I  +H++  +H D+KP+N+L   R    IK+ DFGL    K   +        +  
Sbjct: 196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFL 255
Query: 108 ----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPI 145
                     + P+D                PF  +N  ET   +++ R  L       I
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI 315
Query: 146 SEEARETIVRF 156
           SEEA+E I + 
Sbjct: 316 SEEAKEFISKL 326

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L K   + E+        + +    +   HK+  +HRD+KP N+
Sbjct: 82  ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 139
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L      +F    S   P
Sbjct: 140 LVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSP 175

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL-L 76
           +Y++ E   GG+++  ++++   SE      +      ++ +H  G +HRD+KP N+L +
Sbjct: 91  VYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 77  DARGH---IKLSDFGLCTGLK 94
           D  G+   I++ DFG    L+
Sbjct: 151 DESGNPESIRICDFGFAKQLR 171

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
           T +++APEV  + GY  A D WSLGV++Y  L        TGY P A+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXL--------TGYTPFAN 222

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 16  INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +N++  ME L GG +  L+ +   L E+   +Y+ +    ++ +H    +H D+K DN+L
Sbjct: 125 VNIF--MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 182
Query: 76  LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
           L + G    L DFG  LC    GL KS  T  Y
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 16  INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +N++  ME L GG +  L+ +   L E+   +Y+ +    ++ +H    +H D+K DN+L
Sbjct: 141 VNIF--MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 198
Query: 76  LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
           L + G    L DFG  LC    GL KS  T  Y
Sbjct: 199 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 96  DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 152
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 153 KSDXTLKILDFGLA 166

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 16  INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +N++  ME L GG +  L+ +   L E+   +Y+ +    ++ +H    +H D+K DN+L
Sbjct: 139 VNIF--MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 196
Query: 76  LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
           L + G    L DFG  LC    GL KS  T  Y
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 161 NEDSELKILDFGLA 174

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L   + TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 18  LYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           L +IME++P  D +  ++K       ++       YI +   A+  IH LG  HRDIKP 
Sbjct: 113 LNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 73  NLLLDARGH-IKLSDFG 88
           NLL++++ + +KL DFG
Sbjct: 171 NLLVNSKDNTLKLCDFG 187

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 165 NEDSELKILDFGLA 178

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIMEFLP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 90  NLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 150 VENENRVKIGDFGLTKVL 167

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 141 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 198 KSDCTLKILDFGL 210

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L++ MEF   G +   + K+  + L +        +    +D IH    IHRD+KP N+ 
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 76  LDARGHIKLSDFGLCTGLKK-SHRTDFYRDLSQAKPSDFSYPPFCSE 121
           L     +K+ DFGL T LK    RT     L    P   S   +  E
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKE 215

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + LIMEFLP G +   L K K+ ++ +    Y  +    +D +    ++HRD+   N+L+
Sbjct: 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           ++   +K+ DFGL   ++        +D  +  P  F Y P C
Sbjct: 160 ESEHQVKIGDFGLTKAIETDKEXXTVKD-DRDSPV-FWYAPEC 200

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSE-ECTQFYIA 50
           ++   L+++R  + I L+          LI+E + GG++   L +K++L+E E TQF + 
Sbjct: 78  REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 136
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
           +    +  +H     H D+KP+N++L  +      IKL DFG+ 
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSE-ECTQFYIA 50
           ++   L+++R  + I L+          LI+E + GG++   L +K++L+E E TQF + 
Sbjct: 64  REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 122
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
           +    +  +H     H D+KP+N++L  +      IKL DFG+ 
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSE-ECTQFYIA 50
           ++   L+++R  + I L+          LI+E + GG++   L +K++L+E E TQF + 
Sbjct: 57  REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 115
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
           +    +  +H     H D+KP+N++L  +      IKL DFG+ 
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY+++E +   D+  L      L+E+  +  +    L    IH+ G IHRD+KP N LL+
Sbjct: 107 LYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN 165
Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSW 133
               +K+ DFGL   +          DL + + ++   P   +   Q T   V  W
Sbjct: 166 QDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRW 221

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL----AIDSIHKLGFIHRDIKPD 72
           N+Y++ME   GG+++  ++      +  ++ Y+AE       A+   H    +H+D+KP+
Sbjct: 94  NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPE 153
Query: 73  NLLL-DARGH--IKLSDFGLCTGLKK-SHRTD 100
           N+L  D   H  IK+ DFGL    K   H T+
Sbjct: 154 NILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+L+D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 141 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 198 KSDCTLKILDFGL 210

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 1   MKDYACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQF 47
           +++ A +K+LR          ++ P NL ++ E+L  G +  LL K   ++ L E     
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 48  YIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDFGL 89
              + A  ++ +H      +HRD+K  NLL+D +  +K+ DFGL
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + LIMEFLP G +   L K K+ ++ +    Y  +    +D +    ++HRD+   N+L+
Sbjct: 88  IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 147
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           ++   +K+ DFGL   ++        +D  +  P  F Y P C
Sbjct: 148 ESEHQVKIGDFGLTKAIETDKEXXTVKD-DRDSPV-FWYAPEC 188

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 104 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 161 KSDCTLKILDFGL 173

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 130 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 187
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 188 NEDCELKILDFGLA 201

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 102 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 158
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 159 KSDCTLKILDFGL 171

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 9   QLRMSDP-INLYLIMEFLPGGDMMTLLMKKDTLSEE----CTQFYIAETALAIDSIHKLG 63
           QL+ S P + LY+ M+     ++   + ++ +L +     C   +I + A A++ +H  G
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI-QIAEAVEFLHSKG 184
Query: 64  FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
            +HRD+KP N+       +K+ DFGL T + +
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 96  DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 153 KSDCTLKILDFGL 165

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 104 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 161 KSDCTLKILDFGL 173

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 38  DTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
           D + EE        T  A++ + + L  IHRDIKP N+LLD  G+IKL DFG+   L  S
Sbjct: 120 DVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 97  DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 154 KSDCTLKILDFGL 166

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 97  DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 154 KSDCTLKILDFGL 166

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 164 NEDXELKILDFGLA 177

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 164 NEDXELKILDFGLA 177

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 101 DVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 157
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 158 KSDCTLKILDFGLA 171

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 112 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 170 NEDXELKILDFGLA 183

>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase- Methyltransferase Wbdd Length = 569

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           +L+ME LPG  +  +L   + +  E     +     ++ ++ K GF H D++P N+++DA
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 79  RGHIKLSDFG 88
           R H +L DFG
Sbjct: 375 RQHARLIDFG 384

>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd. Length = 569

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           +L+ME LPG  +  +L   + +  E     +     ++ ++ K GF H D++P N+++DA
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 79  RGHIKLSDFG 88
           R H +L DFG
Sbjct: 375 RQHARLIDFG 384

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 166 NEDCELKILDFGLA 179

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 36  KKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           K  T+ E+           A++ +H KL  IHRD+KP N+L++A G +K+ DFG+
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI 200

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 166 NEDCELKILDFGLA 179

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME + GG +  +L +   + EE        +      +   H++  +HRD+KP N+
Sbjct: 89  ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI--MHRDVKPSNI 146
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
           L+++RG IKL DFG+   L  S    F    S   P
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAP 182

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 164 NEDCELKILDFGLA 177

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 111 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 168
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 169 NEDCELKILDFGLA 182

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 100 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 157
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 158 NEDCELKILDFGLA 171

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 166 NEDCELKILDFGLA 179

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 161 NEDCELKILDFGLA 174

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 161 NEDCELKILDFGLA 174

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 97  DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 155 NEDCELKILDFGLA 168

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 113 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 171 NEDCELKILDFGLA 184

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 113 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 171 NEDCELKILDFGLA 184

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 113 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 171 NEDCELKILDFGLA 184

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 166 NEDCELKILDFGLA 179

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  + +K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 98  DVYLVTHLM-GADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 156 NEDCELKILDFGLA 169

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 2   KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLM-KKDTLSEECTQFYIA 50
           K+   +  LR    +NL+          +I EF+ GG++   +  + + +SE+    Y+ 
Sbjct: 203 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 262
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYR----- 103
           +    +  +H+  ++H D+KP+N++   +    +KL DFGL   L               
Sbjct: 263 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 322
Query: 104 ---DLSQAKPSDF----------SY------PPFCSENPQETYRKVMS 132
              ++++ KP  +          SY       PF  EN  ET R V S
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 370

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 98  DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 156 NEDCELKILDFGLA 169

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 99  DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 156
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 157 NEDCELKILDFGLA 170

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 97  DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 155 NEDCELKILDFGLA 168

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 167 HRKLRLIDWGLA 178

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 120 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 178 NEDCELKILDFGLA 191

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 124 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 182 NEDCELKILDFGLA 195

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 121 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 179 NEDCELKILDFGLA 192

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 164 NEDCELKILDFGLA 177

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 97  DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 155 NEDCELKILDFGLA 168

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 161 NEDCELKILDFGLA 174

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 109 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 165
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 166 HRKLRLIDWGLA 177

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 120 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 178 NEDCELKILDFGLA 191

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 1   MKDYACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQF 47
           +++ A +K+LR          ++ P NL ++ E+L  G +  LL K   ++ L E     
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 48  YIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDL 105
              + A  ++ +H      +HR++K  NLL+D +  +K+ DFGL + LK S    F    
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL-SRLKAS---TFLSSK 197
Query: 106 SQAKPSDFSYPPFCSENPQETYRKVMSW 133
           S A   ++  P    + P      V S+
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSF 225

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 112 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 170 NEDCELKILDFGLA 183

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 159 NEDCELKILDFGLA 172

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 121 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 179 NEDCELKILDFGLA 192

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 121 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 179 NEDCELKILDFGLA 192

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 124 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 182 NEDCELKILDFGLA 195

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 18  LYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           + + ME +PGG +  LL  K      +E+   FY  +    +  +H    +HRDIK DN+
Sbjct: 94  IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNV 153
Query: 75  LLDA-RGHIKLSDFG 88
           L++   G +K+SDFG
Sbjct: 154 LINTYSGVLKISDFG 168

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +L L+ME++P G +   L  + ++       +  +    +  +H   +IHR++   N+LL
Sbjct: 92  SLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLL 150
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           D    +K+ DFGL   + + H  ++YR         F Y P C
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 191

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 165 NEDCELKILDFGLA 178

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPEV  + G+    D WSLG I+Y +L+    F
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 167 HRKLRLIDWGLA 178

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 168 HRKLRLIDWGLA 179

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPEV  + G+    D WSLG I+Y +L+    F
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPEV  + G+    D WSLG I+Y +L+    F
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 165 NEDCELKILDFGLA 178

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 165 NEDCELKILDFGLA 178

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
           GTP+YIAPEV  + G+    D WSLG I+Y +L+    F
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd Length = 471

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           +L+ME LPG  +  +L   + +  E     +     ++ ++ K GF H D++P N+++DA
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKKGFWHDDVRPWNVMVDA 374
Query: 79  RGHIKLSDFG 88
           R H +L DFG
Sbjct: 375 RQHARLIDFG 384

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 36  KKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           K  T+ E+           A++ +H KL  IHRD+KP N+L++A G +K+ DFG+
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI 156

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +L L+ME++P G +   L  + ++       +  +    +  +H   +IHR++   N+LL
Sbjct: 92  SLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLL 150
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           D    +K+ DFGL   + + H  ++YR         F Y P C
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 191

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +L L+ME++P G +   L  + ++       +  +    +  +H   +IHRD+   N+LL
Sbjct: 109 SLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167
Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           D    +K+ DFGL   + + H  + YR         F Y P C
Sbjct: 168 DNDRLVKIGDFGLAKAVPEGH--EXYRVREDGDSPVFWYAPEC 208

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++D  
Sbjct: 116 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 80  GH-IKLSDFGLC 90
              ++L D+GL 
Sbjct: 173 HRKLRLIDWGLA 184

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 20  LIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + ME +PGG +  LL  K      +E+   FY  +    +  +H    +HRDIK DN+L+
Sbjct: 82  IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 141
Query: 77  DA-RGHIKLSDFG 88
           +   G +K+SDFG
Sbjct: 142 NTYSGVLKISDFG 154

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   + +I EF+ GG++   +  + + +SE+    Y+ +    +  +H+  ++H D+KP+
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 73  NLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYR--------DLSQAKPSDF--------- 113
           N++   +    +KL DFGL   L                  ++++ KP  +         
Sbjct: 179 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 114 -SY------PPFCSENPQETYRKVMS 132
            SY       PF  EN  ET R V S
Sbjct: 239 LSYILLSGLSPFGGENDDETLRNVKS 264

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL 
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLA 173

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +L L+ME+LP G +   L + +  L       Y ++    ++ +     +HRD+   N+L
Sbjct: 87  SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 76  LDARGHIKLSDFGL 89
           +++  H+K++DFGL
Sbjct: 147 VESEAHVKIADFGL 160

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 91  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 150
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 151 VENENRVKIGDFGLTKVL 168

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 105 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 161
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 162 KSDCTLKILDFGLA 175

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 86  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 145
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 146 VENENRVKIGDFGLTKVL 163

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 97  DVYLVTHLM-GADLNNIV-KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DFGL 
Sbjct: 155 NEDCELKILDFGLA 168

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 92  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 151
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 152 VENENRVKIGDFGLTKVL 169

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 87  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 146
Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPP 117
           ++    +K+ DFGL   L +    +F++     +   F Y P
Sbjct: 147 VENENRVKIGDFGLTKVLPQD--KEFFKVKEPGESPIFWYAP 186

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 97  DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 154 KSDCTLKILDFGL 166

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +L L+ME+LP G +   L + +  L       Y ++    ++ +     +HRD+   N+L
Sbjct: 88  SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 76  LDARGHIKLSDFGL 89
           +++  H+K++DFGL
Sbjct: 148 VESEAHVKIADFGL 161

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 94  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 153
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 154 VENENRVKIGDFGLTKVL 171

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +L L+ME+LP G +   L + +  L       Y ++    ++ +     +HRD+   N+L
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 76  LDARGHIKLSDFGL 89
           +++  H+K++DFGL
Sbjct: 160 VESEAHVKIADFGL 173

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 85  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 144
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 145 VENENRVKIGDFGLTKVL 162

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 90  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 150 VENENRVKIGDFGLTKVL 167

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 177
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 178 VENENRVKIGDFGLTKVL 195

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 108 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 165 KSDCTLKILDFGL 177

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 18  LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
           LYL +E+ P G+++  L K                  TLS +    + A+ A  +D + +
Sbjct: 91  LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 150
Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
             FIHRD+   N+L+      K++DFGL  G
Sbjct: 151 KQFIHRDLAARNILVGENYVAKIADFGLSRG 181

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L L+ME+LP G +   L + +  L       Y ++    ++ +     +HRD+   N+L
Sbjct: 84  ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 76  LDARGHIKLSDFGL 89
           +++  H+K++DFGL
Sbjct: 144 VESEAHVKIADFGL 157

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 93  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 152
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 153 VENENRVKIGDFGLTKVL 170

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 87  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 146
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 147 VENENRVKIGDFGLTKVL 164

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL   D+ T  M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 79  KLYLVFEFL-HQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 18  LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
           LYL +E+ P G+++  L K                  TLS +    + A+ A  +D + +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
             FIHRD+   N+L+      K++DFGL  G
Sbjct: 161 KQFIHRDLAARNILVGENYVAKIADFGLSRG 191

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77  DARGHIKLSDFGLC 90
            +   +K+ DFGL 
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++Y++ME +       + M+   L  E   + + +    I  +H  G IHRD+KP N+++
Sbjct: 104 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 77  DARGHIKLSDFGL 89
            +   +K+ DFGL
Sbjct: 161 KSDCTLKILDFGL 173

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 87  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 146
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 147 VENENRVKIGDFGLTKVL 164

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHKLGFIHRDIKPDNLL 75
           L++ ME+     +  L+   + L+++  +++    +   A+  IH  G IHRD+KP N+ 
Sbjct: 90  LFIQMEYCENRTLYDLI-HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF 148
Query: 76  LDARGHIKLSDFGLCTGLKKS 96
           +D   ++K+ DFGL   + +S
Sbjct: 149 IDESRNVKIGDFGLAKNVHRS 169

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 105 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 164
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 165 VENENRVKIGDFGLTKVL 182

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 16/103 (15%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQ---F 47
           +K+ A +K+++  + + L          Y++ E++P G+++  L  ++   EE T     
Sbjct: 76  LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLL 133
Query: 48  YIA-ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           Y+A + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL 176

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL 
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA 171

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++ + LK L+ ++ + L+          L+ E+L       L    + ++    + ++ 
Sbjct: 48  IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLF 107
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           +    +   H+   +HRD+KP NLL++ RG +KL+DFGL 
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 147

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L
Sbjct: 105 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 164
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 165 VENENRVKIGDFGLTKVL 182

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL 
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 2   KDYACLKQLRMSDPINL------------YLIMEFLPGGDMMTLLMKKDTLSEE----C- 44
           K+   L++LR  + I L            Y++ME+   G M  +L   D++ E+    C 
Sbjct: 55  KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEML---DSVPEKRFPVCQ 110
Query: 45  TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
              Y  +    ++ +H  G +H+DIKP NLLL   G +K+S  G+   L      D  R 
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 105 LSQAKPS 111
            SQ  P+
Sbjct: 171 -SQGSPA 176

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL 
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL 
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I+EF+  G+++  L +  +  +S     + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL 
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 18  LYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L L+ME   GG +   L+ K++ +        + + ++ +  + +  F+HRD+   N+LL
Sbjct: 84  LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL 143
Query: 77  DARGHIKLSDFGLCTGL 93
             R + K+SDFGL   L
Sbjct: 144 VNRHYAKISDFGLSKAL 160

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 90  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 76  LDAR---GHIKLSDFGLC---TGLKKSHRTDFYRDLSQAKPSDFSYPPFCSEN 122
             ++     +KL+DFG     TG K     D +            YPPF S +
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ D+GL 
Sbjct: 159 NEDCELKILDYGLA 172

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I+EF+  G+++  L +  +  +S     + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I+EF+  G+++  L +  +  +S     + 
Sbjct: 55  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 113 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 120 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 121 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 176

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 112 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 167

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 37  KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHIKLSDFG 88
           K T+     + Y+ +   ++  IH +G  HRDIKP NLLLD   G +KL DFG
Sbjct: 135 KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG 187

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 4   YACLKQLRMSDPINLYL----IMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSI 59
           Y C ++ R    I + L    + E++   D   L ++  TL        + +T   +  +
Sbjct: 83  YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL--------LQQTTSGLAHL 134
Query: 60  HKLGFIHRDIKPDNLLL---DARGHIK--LSDFGLCTGLKKSHRTDFYRDLSQAKPSDFS 114
           H L  +HRD+KP N+L+   +A G IK  +SDFGLC  L    R  F R         + 
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG-RHSFSRRSGVPGTEGWI 193
Query: 115 YPPF----CSENPQET 126
            P      C ENP  T
Sbjct: 194 APEMLSEDCKENPTYT 209

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++ + LK+L+ S+ + LY          L+ E L       L + +  L     + ++ 
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           +    I   H    +HRD+KP NLL++  G +K++DFGL 
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++ + LK+L+ S+ + LY          L+ E L       L + +  L     + ++ 
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           +    I   H    +HRD+KP NLL++  G +K++DFGL 
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 135 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 190

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ E +       +  ++  +S +  Q+++    L +  +H+ G +HRD+ P N+LL 
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 78  ARGHIKLSDFGLC 90
               I + DF L 
Sbjct: 169 DNNDITICDFNLA 181

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQF-----YIAETALAIDSIHKLGFIHRDIKPDNL 74
           L+ME++P G +      +D L   C        +  +    +  +H   +IHR +   N+
Sbjct: 90  LVMEYVPLGSL------RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 143
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           LLD    +K+ DFGL   + + H  ++YR         F Y P C
Sbjct: 144 LLDNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 186

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 113 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYL+ E +       +  ++  +S +  Q+++    L +  +H+ G +HRD+ P N+LL 
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 78  ARGHIKLSDFGLC 90
               I + DF L 
Sbjct: 169 DNNDITICDFNLA 181

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 120 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
           +++ + LK+L+ S+ + LY          L+ E L       L + +  L     + ++ 
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           +    I   H    +HRD+KP NLL++  G +K++DFGL 
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 123 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 178

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQF-----YIAETALAIDSIHKLGFIHRDIKPDNL 74
           L+ME++P G +      +D L   C        +  +    +  +H   +IHR +   N+
Sbjct: 89  LVMEYVPLGSL------RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 142
Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
           LLD    +K+ DFGL   + + H  ++YR         F Y P C
Sbjct: 143 LLDNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 185

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 164 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 201

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 164 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 201

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 163 LRKLRLIDWGLA 174

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 162 LRKLRLIDWGLA 173

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 1   MKDYACLKQLRMSDPINLY----------LIMEFLPGG-----DMMTLLMKKDTLSEECT 45
           +++ + +K+L+  + + LY          L+ EF+        D  T+      L     
Sbjct: 51  IREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLV 110
Query: 46  QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           +++  +    +   H+   +HRD+KP NLL++ RG +KL DFGL 
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 162 LRKLRLIDWGLA 173

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 162 LRKLRLIDWGLA 173

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
           L+K   LS +   +++ +    +  IH    +HRD+KP NLL++    +K+ DFGL 
Sbjct: 135 LLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 163 LRKLRLIDWGLA 174

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L K K+ +       Y ++    ++ +    +IHR++   N+L
Sbjct: 88  NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNIL 147
Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPP 117
           ++    +K+ DFGL   L +    ++Y+     +   F Y P
Sbjct: 148 VENENRVKIGDFGLTKVLPQD--KEYYKVKEPGESPIFWYAP 187

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP+N
Sbjct: 78  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 135
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 162 LRKLRLIDWGLA 173

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 107 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 163
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 164 LRKLRLIDWGLA 175

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 162 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 199

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 94  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 154 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 191

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 162 LRKLRLIDWGLA 173

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 162 LRKLRLIDWGLA 173

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP+N
Sbjct: 77  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 134
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18  LYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           LY++ EF+ G D+   ++K+       SE     Y+ +   A+   H    IHRD+KP  
Sbjct: 103 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC 162
Query: 74  LLLDARGH---IKLSDFGLCTGLKKS 96
           +LL ++ +   +KL  FG+   L +S
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGES 188

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECT-------QFYIAETALAIDSIHKLGFIHRDI 69
            LYL+ EFL      ++ +KK   +   T       + Y+ +    +   H    +HRD+
Sbjct: 79  KLYLVFEFL------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 70  KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
           KP+NLL++  G IKL+DFGL        RT
Sbjct: 133 KPENLLINTEGAIKLADFGLARAFGVPVRT 162

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 84  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 144 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 181

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18  LYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           LY++ EF+ G D+   ++K+       SE     Y+ +   A+   H    IHRD+KP  
Sbjct: 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC 160
Query: 74  LLLDARGH---IKLSDFGLCTGLKKS 96
           +LL ++ +   +KL  FG+   L +S
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGES 186

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 33  LLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           ++ K  T+ E+           A++ +H KL  IHRD+KP N+L++A G +K  DFG+
Sbjct: 126 VIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI 183

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  +S     + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           LI E++   D   L     TL++   ++YI E   A+D  H  G +HRD+KP N+++D  
Sbjct: 126 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 182
Query: 80  -GHIKLSDFGLC 90
              ++L D+GL 
Sbjct: 183 LRKLRLIDWGLA 194

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 88  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 148 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 185

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECT-------QFYIAETALAIDSIHKLGFIHRDI 69
            LYL+ EFL      ++ +KK   +   T       + Y+ +    +   H    +HRD+
Sbjct: 77  KLYLVFEFL------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 70  KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
           KP+NLL++  G IKL+DFGL        RT
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVRT 160

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 82  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 141
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 142 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 179

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  +S     + 
Sbjct: 62  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  +S     + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  +S     + 
Sbjct: 55  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 19  YLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDN 73
           +L++  L  G ++  L K ++   LS +       +T  A+  +H+     IHRD+K +N
Sbjct: 109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN 168
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDF 101
           LLL  +G IKL DFG  T +  SH  D+
Sbjct: 169 LLLSNQGTIKLCDFGSATTI--SHYPDY 194

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
           A+  IH  G IHR++KP N+ +D   ++K+ DFGL   + +S
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  +S     + 
Sbjct: 55  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 8   KQLRMSDP-INLYLIMEFLPGGDMMTLLMKKDTLSEE----CTQFYIAETALAIDSIHKL 62
           ++L+ S P + LY+ M+     ++   +  + T+ E     C   ++ + A A++ +H  
Sbjct: 79  EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL-QIAEAVEFLHSK 137
Query: 63  GFIHRDIKPDNLLLDARGHIKLSDFGLCTGL 93
           G +HRD+KP N+       +K+ DFGL T +
Sbjct: 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 18  LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
           LYL +E+ P G+++  L K                  TLS +    + A+ A  +D + +
Sbjct: 98  LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 157
Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
             FIHR++   N+L+      K++DFGL  G
Sbjct: 158 KQFIHRNLAARNILVGENYVAKIADFGLSRG 188

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 79  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 78  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34  LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L+K   LS +   +++ +    +  IH    +HRD+KP NLLL+    +K+ DFGL
Sbjct: 119 LLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 90  DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 83  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 141 LLINTEGAIKLADFGLARAFGVPVRT 166

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 83  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 141 LLINTEGAIKLADFGLARAFGVPVRT 166

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 79  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 78  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 506
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 507 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 544

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 75  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 80  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 138 LLINTEGAIKLADFGLARAFGVPVRT 163

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 75  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 80  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 138 LLINTEGAIKLADFGLARAFGVPVRT 163

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 77  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I+EF+  G+++  L +  +  ++     + 
Sbjct: 62  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 77  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 505
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     ++Y+  +  K     Y P C
Sbjct: 506 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 543

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I+EF+  G+++  L +  +  ++     + 
Sbjct: 58  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
            +D +H    +HRD+KP N+L+ + G IKL+DFGL 
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 75  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 75  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
            +D +H    +HRD+KP N+L+ + G IKL+DFGL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 76  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
            +D +H    +HRD+KP N+L+ + G IKL+DFGL 
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 75  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP+N
Sbjct: 76  KLYLVFEFLHQD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 133
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L++ MEF   G +   + K+  + L +        +    +D IH    I+RD+KP N+ 
Sbjct: 95  LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 76  LDARGHIKLSDFGLCTGLK 94
           L     +K+ DFGL T LK
Sbjct: 155 LVDTKQVKIGDFGLVTSLK 173

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 77  KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
           NL ++ ++  G  +   L  ++T  +      IA +TA  +D +H    IHRD+K +N+ 
Sbjct: 105 NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIF 164
Query: 76  LDARGHIKLSDFGLCT 91
           L     +K+ DFGL T
Sbjct: 165 LHEGLTVKIGDFGLAT 180

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 94  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 154 YTSKRPNAILKLTDFGF 170

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 96  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 156 YTSKRPNAILKLTDFGF 172

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 1   MKDYACLKQLRMSDPINLY------------LIMEFLPGGDMMTLLMKKDT---LSEECT 45
           M+++  LK+L   + + L+            LIMEF P G + T+L +      L E   
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 46  QFYIAETALAIDSIHKLGFIHRDIKPDNLLL----DARGHIKLSDFGLCTGLK 94
              + +    ++ + + G +HR+IKP N++     D +   KL+DFG    L+
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 194 YTSKRPNAILKLTDFGF 210

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 95  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 155 YTSKRPNAILKLTDFGF 171

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 90  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 150 YTSKRPNAILKLTDFGF 166

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 88  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 148 YTSKRPNAILKLTDFGF 164

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 88  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 148 YTSKRPNAILKLTDFGF 164

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-A 78
           L+ E++   D   L      L++   +FY+ E   A+D  H  G +HRD+KP N+++D  
Sbjct: 112 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 79  RGHIKLSDFGLC 90
           +  ++L D+GL 
Sbjct: 169 QKKLRLIDWGLA 180

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 89  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 149 YTSKRPNAILKLTDFGF 165

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 90  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 150 YTSKRPNAILKLTDFGF 166

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 164 YTSKRPNAILKLTDFGF 180

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+  FGL 
Sbjct: 159 NEDCELKILGFGLA 172

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 1   MKDYACLKQLRMSDPINLY------------LIMEFLPGGDMMTLLMKKDT---LSEECT 45
           M+++  LK+L   + + L+            LIMEF P G + T+L +      L E   
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 46  QFYIAETALAIDSIHKLGFIHRDIKPDNLLL----DARGHIKLSDFG 88
              + +    ++ + + G +HR+IKP N++     D +   KL+DFG
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 29/130 (22%)
Query: 7   LKQL-RMSDP--INLY--------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA 55
           L+QL R++ P  + LY        L+ME+  GG +  +L   + L      +Y A  A++
Sbjct: 53  LRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLP-----YYTAAHAMS 107
Query: 56  -----------IDSIHKLGFIHRDIKPDNLLLDARGHI-KLSDFGLCTGLKKSHRTDFYR 103
                      + S+     IHRD+KP NLLL A G + K+ DFG    + ++H T+   
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKG 166
Query: 104 DLSQAKPSDF 113
             +   P  F
Sbjct: 167 SAAWMAPEVF 176

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-A 78
           L+ E++   D   L      L++   +FY+ E   A+D  H  G +HRD+KP N+++D  
Sbjct: 117 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 79  RGHIKLSDFGLC 90
           +  ++L D+GL 
Sbjct: 174 QKKLRLIDWGLA 185

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 18  LYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L L+ME   GG +   L+ K++ +        + + ++ +  + +  F+HR++   N+LL
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL 469
Query: 77  DARGHIKLSDFGLCTGL 93
             R + K+SDFGL   L
Sbjct: 470 VNRHYAKISDFGLSKAL 486

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NLL
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 76  LDAR---GHIKLSDFG 88
             ++     +KL+DFG
Sbjct: 200 YTSKRPNAILKLTDFG 215

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  +S     + 
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHR++   N L+     +K++DFGL
Sbjct: 324 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 364

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +Y++ME + GGD +T L  +   L  +     + + A  ++ +     IHRD+   N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 77  DARGHIKLSDFGL 89
             +  +K+SDFG+
Sbjct: 247 TEKNVLKISDFGM 259

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +Y++ME + GGD +T L  +   L  +     + + A  ++ +     IHRD+   N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 77  DARGHIKLSDFGL 89
             +  +K+SDFG+
Sbjct: 247 TEKNVLKISDFGM 259

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA-----------IDSIHKLGFIHRD 68
           L+ME+  GG +  +L   + L      +Y A  A++           + S+     IHRD
Sbjct: 76  LVMEYAEGGSLYNVLHGAEPLP-----YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 69  IKPDNLLLDARGHI-KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF 113
           +KP NLLL A G + K+ DFG    + ++H T+     +   P  F
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAPEVF 175

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
            L ++ ++  G  +   L   +T  E      IA +TA  +D +H    IHRD+K +N+ 
Sbjct: 81  QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 140
Query: 76  LDARGHIKLSDFGLCT 91
           L     +K+ DFGL T
Sbjct: 141 LHEDNTVKIGDFGLAT 156

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 79  KLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
            L ++ ++  G  +   L   +T  E      IA +TA  +D +H    IHRD+K +N+ 
Sbjct: 93  QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 76  LDARGHIKLSDFGLCT 91
           L     +K+ DFGL T
Sbjct: 153 LHEDNTVKIGDFGLAT 168

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 58  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
            L ++ ++  G  +   L   +T  E      IA +TA  +D +H    IHRD+K +N+ 
Sbjct: 93  QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 76  LDARGHIKLSDFGLCT 91
           L     +K+ DFGL T
Sbjct: 153 LHEDNTVKIGDFGLAT 168

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 90  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 62  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 62  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            LYL+ EFL     +   M    L+       + Y+ +    +   H    +HRD+KP N
Sbjct: 78  KLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT 99
           LL++  G IKL+DFGL        RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 90  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 184 PQNLLLDPDTAVLKLCDFG 202

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 90  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 90  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ D GL 
Sbjct: 159 NEDCELKILDAGLA 172

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 91  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 150
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 151 PQNLLLDPDTAVLKLCDFG 169

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 62  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 61  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 161

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 90  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 126 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 185
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 186 PQNLLLDPDTAVLKLCDFG 204

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 70  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 130 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 170

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 103 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 162
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 163 PQNLLLDPDTAVLKLCDFG 181

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 128 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 187
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 188 PQNLLLDPDTAVLKLCDFG 206

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 118 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 177
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 178 PQNLLLDPDTAVLKLCDFG 196

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 102 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 161
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 162 PQNLLLDPDTAVLKLCDFG 180

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 59  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 95  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 154
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 155 PQNLLLDPDTAVLKLCDFG 173

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 102 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 161
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 162 PQNLLLDPDTAVLKLCDFG 180

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 94  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 153
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 154 PQNLLLDPDTAVLKLCDFG 172

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 184 PQNLLLDPDTAVLKLCDFG 202

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 98  DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 157
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 158 PQNLLLDPDTAVLKLCDFG 176

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 59  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 59  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHRD+   N L+     +K++DFGL
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 109 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 168
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 169 PQNLLLDPDTAVLKLCDFG 187

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14  DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           D + L L+++++P             K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 169 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 228
Query: 71  PDNLLLDA-RGHIKLSDFG 88
           P NLLLD     +KL DFG
Sbjct: 229 PQNLLLDPDTAVLKLCDFG 247

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 11  RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           R  DP+  Y++ME++ G  +     +K  ++E     Y+ E   A+  +H +G ++ D+K
Sbjct: 153 RHGDPVG-YIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALSYLHSIGLVYNDLK 209
Query: 71  PDNLLLDARGHIKLSDFGLCT 91
           P+N++L     +KL D G  +
Sbjct: 210 PENIMLTEE-QLKLIDLGAVS 229

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L +IME + GG++ + + ++     +E      + +   AI  +H     HRD+KP+NLL
Sbjct: 82  LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 142 YTSKEKDAVLKLTDFGF 158

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ D GL 
Sbjct: 159 NEDCELKILDRGLA 172

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L +IME + GG++ + + ++     +E      + +   AI  +H     HRD+KP+NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 76  LDAR---GHIKLSDFGL 89
             ++     +KL+DFG 
Sbjct: 161 YTSKEKDAVLKLTDFGF 177

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 37  KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIKLSDFG 88
           K TL     + Y+ +   ++  IH  G  HRDIKP NLLLD     +KL DFG
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +Y+I EF+  G ++  L   +   +   +   + A+ A  +  I +  +IHRD++  N+L
Sbjct: 84  IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 76  LDARGHIKLSDFGLCTGLKKSHRT 99
           + A    K++DFGL   ++ +  T
Sbjct: 144 VSASLVCKIADFGLARVIEDNEYT 167

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ D GL 
Sbjct: 159 NEDCELKILDGGLA 172

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+   + G D+  ++ K   L+++  QF I +    +  IH    IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77  DARGHIKLSDFGLC 90
           +    +K+ DF L 
Sbjct: 159 NEDCELKILDFYLA 172

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 20  LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
           L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL  +
Sbjct: 88  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 80  GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
            + K+SDFGL   L+     + Y+  +  K     Y P C
Sbjct: 148 HYAKISDFGLSKALRADE--NXYKAQTHGKWPVKWYAPEC 185

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11  RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           R    I + L+ E +   D+ T L K     L  E  +  + +    +D +H    +HRD
Sbjct: 79  RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 137
Query: 69  IKPDNLLLDARGHIKLSDFGLC 90
           +KP+N+L+ + G +KL+DFGL 
Sbjct: 138 LKPENILVTSGGTVKLADFGLA 159

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11  RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           R    I + L+ E +   D+ T L K     L  E  +  + +    +D +H    +HRD
Sbjct: 79  RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 137
Query: 69  IKPDNLLLDARGHIKLSDFGLC 90
           +KP+N+L+ + G +KL+DFGL 
Sbjct: 138 LKPENILVTSGGTVKLADFGLA 159

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11  RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           R    I + L+ E +   D+ T L K     L  E  +  + +    +D +H    +HRD
Sbjct: 79  RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 137
Query: 69  IKPDNLLLDARGHIKLSDFGLC 90
           +KP+N+L+ + G +KL+DFGL 
Sbjct: 138 LKPENILVTSGGTVKLADFGLA 159

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
            +D +H    +HRD+KP+N+L+ + G +KL+DFGL 
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 48  YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
           Y+ +    +   H    +HRD+KP NLL++  G IKL+DFGL        RT
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 48  YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
           Y+ +    +   H    +HRD+KP NLL++  G IKL+DFGL        RT
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 40  LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
           L  E  + ++ +    +   H    +HRD+KP NLL++  G +KL+DFGL
Sbjct: 98  LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGL 147

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +Y+I EF+  G ++  L   +   +   +   + A+ A  +  I +  +IHRD++  N+L
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 76  LDARGHIKLSDFGLCTGLKKSHRT 99
           + A    K++DFGL   ++ +  T
Sbjct: 317 VSASLVCKIADFGLARVIEDNEYT 340

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 85  VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77  DARGHIKLSDFGL 89
            A   +KL DFGL
Sbjct: 145 SATDCVKLGDFGL 157

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +Y+I EF+  G ++  L   +   +   +   + A+ A  +  I +  +IHRD++  N+L
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 310
Query: 76  LDARGHIKLSDFGLC 90
           + A    K++DFGL 
Sbjct: 311 VSASLVCKIADFGLA 325

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQF-YIAETALAIDSIHKLGFIHRDIKPDNLL 75
           NL LIME+LP G +   L       +      Y ++    ++ +    +IHRD+   N+L
Sbjct: 90  NLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 76  LDARGHIKLSDFGLCTGL 93
           ++    +K+ DFGL   L
Sbjct: 150 VENENRVKIGDFGLTKVL 167

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 161 VDGMLKLIDFGIANQMQ 177

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 189 VDGMLKLIDFGIANQMQ 205

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 161 VDGMLKLIDFGIANQMQ 177

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1   MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
           +K+ A +K+++  + + L          Y+I EF+  G+++  L +  +  ++     + 
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 362
Query: 49  IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             + + A++ + K  FIHR++   N L+     +K++DFGL
Sbjct: 363 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 403

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 77  DARGHIKLSDFGLCTGLKKS 96
            A   +KL DFGL   ++ S
Sbjct: 525 SATDCVKLGDFGLSRYMEDS 544

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 87  IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 145 VDGMLKLIDFGIANQMQ 161

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 84  IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 142 VDGMLKLIDFGIANQMQ 158

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 87  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 146
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 147 SSNDCVKLGDFGL 159

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 83  IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 140
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 141 VDGMLKLIDFGIANQMQ 157

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 189 VDGMLKLIDFGIANQMQ 205

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 88  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 147
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 148 SSNDCVKLGDFGL 160

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 90  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 149
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 150 SSNDCVKLGDFGL 162

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 172
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 173 SSNDCVKLGDFGL 185

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N L+ 
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 78  ARGHIKLSDFGLCTGLK 94
             G +KL DFG+   ++
Sbjct: 189 VDGMLKLIDFGIANQMQ 205

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 82  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 141
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 142 SSNDCVKLGDFGL 154

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           + LI+E+  GG++ +L + +  + +SE      I +    +  +H+   +H D+KP N+L
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 76  LDA---RGHIKLSDFGL 89
           L +    G IK+ DFG+
Sbjct: 164 LSSIYPLGDIKIVDFGM 180

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 85  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 145 SSNDCVKLGDFGL 157

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 85  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 145 SSNDCVKLGDFGL 157

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY+++E +   D   L      L+E   +  +    + +  +H  G +HRD+KP N L++
Sbjct: 132 LYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190
Query: 78  ARGHIKLSDFGLC 90
               +K+ DFGL 
Sbjct: 191 QDCSVKVCDFGLA 203

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 85  VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 145 SSNDCVKLGDFGL 157

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            + LIM+ +P G ++  + + KD +  +    +  + A  ++ +     +HRD+   N+L
Sbjct: 91  TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 76  LDARGHIKLSDFGLCTGL 93
           +    H+K++DFGL   L
Sbjct: 151 VKTPQHVKITDFGLAKLL 168

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 38  DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHIKLSDFGLCTG 92
           ++LS +  + Y+     A+  IH+ G +HRD+KP N L + R     L DFGL  G
Sbjct: 112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 77  DARGHIKLSDFGLCTGLKKS 96
            +   +KL DFGL   ++ S
Sbjct: 525 SSNDCVKLGDFGLSRYMEDS 544

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           SD  +L L+  ++P G ++  L   D    LS           A  I+ +H+   IHRDI
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI 159
Query: 70  KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
           K  N+LLD     K+SDFGL    +K  +T
Sbjct: 160 KSANILLDEAFTAKISDFGLARASEKFAQT 189

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 246 FEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTV--GTPDYIAPEVFLQTG--YGP 301
           F  N  FE  L     +D     E +K N       T   GTP ++APEV   T   YGP
Sbjct: 201 FSTNKSFEIKL-----VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 302 AADWWSLGVIMYEMLIAPEVF 322
             D WS GV+++ +L+    F
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPF 276

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	351
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-73
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-15
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-73
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-71
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-15
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-52
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-14
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-51
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-15
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-10
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-49
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	8e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-49
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-11
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-48
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-15
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-10
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-47
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-46
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-15
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-10
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-45
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-15
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-45
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-15
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-10
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-45
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-44
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-44
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-14
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-42
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-15
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-42
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-42
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-15
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-10
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-42
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-14
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-41
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	6e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-38
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-14
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-36
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-14
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-32
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-14
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-26
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-13
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-26
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	6e-26
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-12
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-25
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-14
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-24
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-12
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-24
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-23
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-22
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-21
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-21
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-21
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-10
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-21
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-21
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-21
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-20
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-20
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-20
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-20
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-19
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-19
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-10
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-19
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-19
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-19
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-19
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-19
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-09
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-19
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-19
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-19
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-18
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-18
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-18
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-18
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-18
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-18
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-18
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-18
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-18
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-18
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-10
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-18
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	7e-18
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-17
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-17
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-17
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-17
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-17
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-11
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-17
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-11
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-17
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-17
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-17
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-17
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-17
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-17
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-17
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	9e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-17
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-17
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-17
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-11
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-17
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-16
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-16
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-16
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-10
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-16
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-16
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-12
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-16
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-16
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-16
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	8e-11
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-15
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-15
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-07
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-15
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-15
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-15
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-15
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-12
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-04
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-14
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-14
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-14
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-10
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-14
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-14
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	7e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-14
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-14
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-14
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-14
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-14
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-13
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-13
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-13
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-10
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-13
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-13
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-13
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-13
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-13
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-13
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-13
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-13
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-09
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-13
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-12
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	5e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-12
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-12
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-12
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-11
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-07
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-11
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	9e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	9e-11
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	9e-11
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-10
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-10
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-10
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	6e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-09
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-08
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	9e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	6e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-06
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-05
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-05
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	6e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	5e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	9e-05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-04
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	3e-04

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  232 bits (593), Expect = 2e-73
 Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 51/287 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LY++ME++PGGD++ L+   D + E+  +FY AE  LA+D+IH +GFIHRD+KPDN
Sbjct: 140 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 198

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLS-------------QAKPSDFSY----- 115
           +LLD  GH+KL+DFG C    K ++    R  +             +++  D  Y     
Sbjct: 199 MLLDKSGHLKLADFGTC---MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 255

Query: 116 ---------------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC 160
                           PF +++   TY K+M+ +++L FP +  IS+EA+  I  F ++ 
Sbjct: 256 WWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 315

Query: 161 DRRLGSARGVEELKSLGACQFFRGVDWD--HIRERPAAIPVQVKSIDDTSNFDDFPDVKL 218
           + RLG   GVEE+K      FF+   W    +R+  A +   + S  DTSNFDD  + K 
Sbjct: 316 EVRLGR-NGVEEIKRH---LFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKG 371

Query: 219 EIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSK 265
           E  + P+P+    +     F+ +T+            LSS NP D++
Sbjct: 372 EEETFPIPK--AFVGNQLPFVGFTYYSNRR------YLSSANPNDNR 410

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 75.1 bits (185), Expect = 3e-15
 Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEML 316
            K       + VGTPDYI+PEV    G    YG   DWWS+GV +YEML
Sbjct: 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  232 bits (593), Expect = 2e-73
 Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 44/277 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   LYL+ME+  GGD++TLL K  + +  E  +FY+AE  +AIDS+H+LG++HRDIKPD
Sbjct: 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPD 191

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRT---------------------DFYRDLSQAKPS 111
           N+LLD  GHI+L+DFG C  L+                                S     
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPEC 251

Query: 112 DF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFCS 158
           D+               PF +++  ETY K++ +++ L  P     + EEAR+ I R   
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC 311

Query: 159 ECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDF----- 213
             + RLG   G  + +      FF G+DWD +R+         +   DT NFD       
Sbjct: 312 PPETRLGR-GGAGDFR---THPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGLT 367

Query: 214 PDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEANS 250
             V     +    ++G  +     F+ Y++       
Sbjct: 368 AMVSGGGETLSDIREGAPLGVHLPFVGYSYSCMALRD 404

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 75.9 bits (187), Expect = 2e-15
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 279 AYSTVGTPDYIAPEVFLQTG-------YGPAADWWSLGVIMYEMLI 317
           +   VGTPDY++PE+    G       YGP  DWW+LGV  YEM  
Sbjct: 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  228 bits (583), Expect = 1e-71
 Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 37/295 (12%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D  NLYL+M++  GGD++TLL K +D L EE  +FY+AE  +AIDS+H+L ++HRDIKPD
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPD 204

Query: 73  NLLLDARGHIKLSDFGLC-----TGLKKSH--------------RTDFYRDLSQAKPSDF 113
           N+L+D  GHI+L+DFG C      G  +S               +             D+
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264

Query: 114 ------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFCSEC 160
                          PF +E+  ETY K+M+ ++   FP +V  +SE A++ I R     
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR 324

Query: 161 DRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEI 220
           + RLG   G+E+ K      FF G+DWD+IR   A    +V S  DTSNFD   D     
Sbjct: 325 EHRLGQ-NGIEDFKKH---PFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNS 380

Query: 221 PSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNR 275
            + P P           F+ +T+      S       +  P  ++        + 
Sbjct: 381 ETMPPPTHTAFSGHHLPFVGFTYTSSCVLSDRSCLRVTAGPTSAENLYFQSHHHH 435

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 5/49 (10%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEML 316
           ++    +   VGTPDYI+PE+       +  YGP  DWWSLGV MYEML
Sbjct: 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  175 bits (446), Expect = 3e-52
 Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 42/252 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD+KP+N
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDF-------Y------RDLSQAKPSDF------- 113
           LL+D +G+I+++DFG     K+     +                    K  D+       
Sbjct: 172 LLIDQQGYIQVTDFGFA---KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228

Query: 114 -----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSA 167
                 YPPF ++ P + Y K++S    + FP     S + ++ +      +  +R G+ 
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVS--GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNL 284

Query: 168 R-GVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAP 224
           + GV ++K     ++F   DW  I +R   A    + K   DTSNFDD+ +   E     
Sbjct: 285 KNGVNDIK---NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE---EEIRVS 338

Query: 225 LPQDGEIIYKDW 236
           + +     + ++
Sbjct: 339 INEKCGKEFTEF 350

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 8/46 (17%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
           GTP+ +APE+ L  GY  A DWW+LGV++YEM          GY P
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMA--------AGYPP 237

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 58.5 bits (142), Expect = 7e-10
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+ L  GY  A DWW+LGV++YEM 
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMA 232

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  171 bits (436), Expect = 4e-51
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 40/248 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +++IM+++ GG++ +LL K         +FY AE  LA++ +H    I+RD+KP+N
Sbjct: 77  DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN 136

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDF-------Y------RDLSQAKPSDF------- 113
           +LLD  GHIK++DFG     K      +       Y            K  D+       
Sbjct: 137 ILLDKNGHIKITDFGFA---KYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 193

Query: 114 -----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS- 166
                 Y PF   N  +TY K+++    L FPP    +E+ ++ + R  + +  +RLG+ 
Sbjct: 194 YEMLAGYTPFYDSNTMKTYEKILN--AELRFPPF--FNEDVKDLLSRLITRDLSQRLGNL 249

Query: 167 ARGVEELKSLGACQFFRGVDWDHI--RERPAAIPVQVKSID-DTSNFDDFPDVKLEIPSA 223
             G E++K      +F+ V W+ +  R         ++    DTS FD +P+  +     
Sbjct: 250 QNGTEDVK---NHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQ 306

Query: 224 PLPQDGEI 231
                 ++
Sbjct: 307 GEDPYADL 314

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 8/46 (17%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
           GTPDYIAPEV     Y  + DWWS G+++YEML         GY P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML--------AGYTP 202

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           IAPEV     Y  + DWWS G+++YEML
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEML 197

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  167 bits (425), Expect = 2e-49
 Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 38/224 (16%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLI+E+L GG++   L ++    E+   FY+AE ++A+  +H+ G I+RD+KP+N++L+
Sbjct: 96  LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
            +GH+KL+DFGLC   +     T  F     Y            +  D+           
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA-RGV 170
              PPF  EN ++T  K++  +  L  PP   +++EAR+ + +        RLG+     
Sbjct: 216 TGAPPFTGENRKKTIDKIL--KCKLNLPPY--LTQEARDLLKKLLKRNAASRLGAGPGDA 271

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFD 211
            E+++     FFR ++W+ +  R   P   P  ++S +D S FD
Sbjct: 272 GEVQAH---PFFRHINWEELLARKVEPPFKP-LLQSEEDVSQFD 311

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 18/38 (47%), Positives = 29/38 (76%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            ++  GT +Y+APE+ +++G+  A DWWSLG +MY+ML
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 61.4 bits (150), Expect = 8e-11
 Identities = 15/28 (53%), Positives = 23/28 (82%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+ +++G+  A DWWSLG +MY+ML
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDML 215

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  165 bits (421), Expect = 8e-49
 Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 38/225 (16%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LYLI++FL GGD+ T L K+   +EE  +FY+AE ALA+D +H LG I+RD+KP+N+LLD
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 160

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
             GHIKL+DFGL    +    +   F     Y            + +D+           
Sbjct: 161 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGV 170
               PF  ++ +ET   ++  +  L  P    +S EA+  +   F      RLG+   GV
Sbjct: 221 TGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGV 276

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
           EE+K      FF  +DW+ +  R   P   P      +DT  FD 
Sbjct: 277 EEIK---RHSFFSTIDWNKLYRREIHPPFKP-ATGRPEDTFYFDP 317

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 22/38 (57%), Positives = 29/38 (76%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           AYS  GT +Y+APEV  + G+  +ADWWS GV+M+EML
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 61.0 bits (149), Expect = 9e-11
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  + G+  +ADWWS GV+M+EML
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEML 220

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  165 bits (420), Expect = 3e-48
 Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 37/268 (13%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +++++ GG++   L ++    E   +FY AE A A+  +H L  ++RD+KP+N+LLD
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 173

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
           ++GHI L+DFGLC   ++ +  T  F     Y            +  D+           
Sbjct: 174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
              PPF S N  E Y  ++     L   P   I+  AR  +      +  +RLG+     
Sbjct: 234 YGLPPFYSRNTAEMYDNIL--NKPLQLKPN--ITNSARHLLEGLLQKDRTKRLGAKDDFM 289

Query: 172 ELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQD 228
           E+KS     FF  ++WD +  +   P   P  V   +D  +FD     +    +     D
Sbjct: 290 EIKSH---VFFSLINWDDLINKKITPPFNP-NVSGPNDLRHFDPEFTEEPVPNAIGKAPD 345

Query: 229 GEIIYKDWVFINYTFKRFEANSPFEFSL 256
             ++          F  F    P +  L
Sbjct: 346 SVLVTASVKEAAEAFLGFSYAPPTDSFL 373

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 74.6 bits (184), Expect = 4e-15
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+Y+APEV  +  Y    DWW LG ++YEML 
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY 234

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           +APEV  +  Y    DWW LG ++YEML 
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLY 234

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  162 bits (411), Expect = 2e-47
 Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 37/210 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP+N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160

Query: 74  LLLDARGHIKLSDFGLC---TGLKKSHRTD-F-----Y------RDLSQAKPSDF----- 113
           +LL+   HI+++DFG     +   K  R + F     Y       + S  K SD      
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 220

Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
                    PPF + N    ++K++  +    FP +     +AR+ + +    +  +RLG
Sbjct: 221 IIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPEK--FFPKARDLVEKLLVLDATKRLG 276

Query: 166 S--ARGVEELKSLGACQFFRGVDWDHIRER 193
                G   LK   A  FF  V W+++ ++
Sbjct: 277 CEEMEGYGPLK---AHPFFESVTWENLHQQ 303

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 76.1 bits (188), Expect = 6e-16
 Identities = 15/48 (31%), Positives = 30/48 (62%)

Query: 269 ESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
               ++++A A S VGT  Y++PE+  +     ++D W+LG I+Y+++
Sbjct: 179 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  159 bits (405), Expect = 3e-46
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 38/225 (16%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK +NL+LD
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
             GHIK++DFGLC  G+        F     Y       D    +  D+           
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA-RGV 170
               PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG      
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDA 255

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
           +E+      +FF  ++W  + ++   P   P QV S  DT  FDD
Sbjct: 256 KEVMEH---RFFLSINWQDVVQKKLLPPFKP-QVTSEVDTRYFDD 296

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 74.6 bits (184), Expect = 4e-15
 Identities = 21/34 (61%), Positives = 25/34 (73%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+Y+APEV     YG A DWW LGV+MYEM+ 
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 17/29 (58%), Positives = 20/29 (68%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           +APEV     YG A DWW LGV+MYEM+ 
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  157 bits (400), Expect = 2e-45
 Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 39/226 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ +MEF+ GGD+M  + K     E   +FY AE   A+  +H  G I+RD+K DN+LLD
Sbjct: 99  LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
             GH KL+DFG+C  G+     T  F     Y      +++      D+           
Sbjct: 159 HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSAR--G 169
             + PF +EN  + +  ++   D +V+P    + E+A   +  F ++    RLGS    G
Sbjct: 219 CGHAPFEAENEDDLFEAIL--NDEVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGG 274

Query: 170 VEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
              +       FF+ +DW  +  R   P   P ++KS +D SNFD 
Sbjct: 275 EHAIL---RHPFFKEIDWAQLNHRQIEPPFRP-RIKSREDVSNFDP 316

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 22/34 (64%), Positives = 28/34 (82%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTPDYIAPE+  +  YGPA DWW++GV++YEML 
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC 219

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 17/29 (58%), Positives = 23/29 (79%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+  +  YGPA DWW++GV++YEML 
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLC 219

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  157 bits (399), Expect = 2e-45
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 40/224 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ +ME+L GGD+M  +            FY AE  L +  +H  G ++RD+K DN+LLD
Sbjct: 93  LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152

Query: 78  ARGHIKLSDFGLC-TGLKKSHRT-------DF-----YRDLSQAKPSDF----------- 113
             GHIK++DFG+C   +    +T       D+               D+           
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSARGVE 171
               PF  ++ +E +  +    D   +P    + +EA++ +V+      ++RLG      
Sbjct: 213 IGQSPFHGQDEEELFHSIR--MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGVR---G 265

Query: 172 ELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
           +++       FR ++W+ +  +   P   P +VKS  D SNFD 
Sbjct: 266 DIR---QHPLFREINWEELERKEIDPPFRP-KVKSPFDCSNFDK 305

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 74.2 bits (183), Expect = 5e-15
 Identities = 22/34 (64%), Positives = 26/34 (76%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTPDYIAPE+ L   Y  + DWWS GV++YEMLI
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 213

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 17/29 (58%), Positives = 21/29 (72%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+ L   Y  + DWWS GV++YEMLI
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLI 213

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  156 bits (397), Expect = 6e-45
 Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 39/225 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE A+ +  +   G I+RD+K DN++LD
Sbjct: 96  LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155

Query: 78  ARGHIKLSDFGLC-TGLKKSHRT-------DF-----YRDLSQAKPSDF----------- 113
           + GHIK++DFG+C   +     T       D+            K  D+           
Sbjct: 156 SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA-RGV 170
               PF  E+  E ++ +M     + +P    +S+EA             +RLG    G 
Sbjct: 216 AGQAPFEGEDEDELFQSIM--EHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGE 271

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
            ++K      FFR +DW+ +  +   P   P +     +  NFD 
Sbjct: 272 RDIK---EHAFFRYIDWEKLERKEIQPPYKP-KACG-RNAENFDR 311

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 20/34 (58%), Positives = 25/34 (73%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTPDYIAPE+     YG + DWW+ GV++YEML 
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+     YG + DWW+ GV++YEML 
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  154 bits (392), Expect = 3e-44
 Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 51/237 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               L+LI++++ GG++ T L +++  +E   Q Y+ E  LA++ +HKLG I+RDIK +N
Sbjct: 130 TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLEN 189

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRD---------------LSQAKPSDFS---- 114
           +LLD+ GH+ L+DFGL    K+    +  R                       D +    
Sbjct: 190 ILLDSNGHVVLTDFGLS---KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW 246

Query: 115 ------------YPPFCSE----NPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
                         PF  +    +  E  R+++  +    +P E  +S  A++ I R   
Sbjct: 247 SLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQE--MSALAKDLIQRLLM 302

Query: 159 -ECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNF 210
            +  +RLG   R  +E+K      FF+ ++WD +  +       P  ++   D SNF
Sbjct: 303 KDPKKRLGCGPRDADEIKEH---LFFQKINWDDLAAKKVPAPFKP-VIRDELDVSNF 355

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 71.6 bits (176), Expect = 4e-14
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 279 AYSTVGTPDYIAPEVFL--QTGYGPAADWWSLGVIMYEML 316
           AY   GT +Y+AP++     +G+  A DWWSLGV+MYE+L
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  154 bits (392), Expect = 6e-44
 Identities = 46/244 (18%), Positives = 93/244 (38%), Gaps = 44/244 (18%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  +++++++ L GGD+   L +     EE  + +I E  +A+D +     IHRD+KPDN
Sbjct: 86  DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDN 145

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTD-------------FYRDLSQA--KPSDF----- 113
           +LLD  GH+ ++DF +   L +  +               F            D+     
Sbjct: 146 ILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGV 205

Query: 114 -------SYPPF---CSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDR 162
                     P+    S + +E           + +P     S+E    + +      D+
Sbjct: 206 TAYELLRGRRPYHIRSSTSSKEIVHTFE--TTVVTYPSA--WSQEMVSLLKKLLEPNPDQ 261

Query: 163 RLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDD-FPDVKLEIP 221
           R      + ++++     +   ++WD + ++   +           N D  F   ++ + 
Sbjct: 262 RFS---QLSDVQNF---PYMNDINWDAVFQK--RLIPGFIPNKGRLNCDPTFELEEMILE 313

Query: 222 SAPL 225
           S PL
Sbjct: 314 SKPL 317

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 276 RALAYSTVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEML 316
                +  GT  Y+APE+F      GY  A DWWSLGV  YE+L
Sbjct: 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  150 bits (380), Expect = 1e-42
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 48/235 (20%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 85  LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
           + GHIKL+D+G+C  GL+    T  F     Y      R        D+           
Sbjct: 145 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204

Query: 114 -SYPPFC---------SENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDR 162
               PF                 ++ ++     +  P    +S +A   +  F   +   
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVIL--EKQIRIPRS--LSVKAASVLKSFLNKDPKE 260

Query: 163 RLGS--ARGVEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
           RLG     G  +++      FFR VDWD + ++   P   P  +       NFD 
Sbjct: 261 RLGCHPQTGFADIQ---GHPFFRNVDWDMMEQKQVVPPFKP-NISGEFGLDNFDS 311

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 19/34 (55%), Positives = 26/34 (76%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+YIAPE+     YG + DWW+LGV+M+EM+ 
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 205

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+     YG + DWW+LGV+M+EM+ 
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMA 205

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  155 bits (393), Expect = 2e-42
 Identities = 70/330 (21%), Positives = 124/330 (37%), Gaps = 53/330 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 322

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDF-----Y-------RDLSQAKPSDF-------- 113
           +LLD  GH+++SD GL     K           Y       + ++    +D+        
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 382

Query: 114 ----SYPPFCSENP---QETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLG 165
                + PF         E  R  +     +  P     S E R  +      + +RRLG
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTL--TMAVELPDS--FSPELRSLLEGLLQRDVNRRLG 438

Query: 166 S-ARGVEELKSLGACQFFRGVDWDHIRER-------PAAIPVQVKSIDDTSNFDDFPDVK 217
              RG +E+K      FFR +DW  +  +       P    V      D  +FD   +  
Sbjct: 439 CLGRGAQEVKES---PFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFD--EEDT 493

Query: 218 LEIPSAPLPQDGEIIYKDWVFIN-YTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRR 276
             I      Q+   +Y+++       +++  A + F+   + T+ ++++++    K  + 
Sbjct: 494 KGIKLLDSDQE---LYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKT---KNKQL 547

Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWW 306
                     D I      + G  P    W
Sbjct: 548 GHEEDYALGKDCIMHGYMSKMG-NPFLTQW 576

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 71.1 bits (174), Expect = 1e-13
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 9/59 (15%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
               +   +++VGT  Y+APEV      Y  +ADW+SLG +++++L         G+ P
Sbjct: 340 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL--------RGHSP 390

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  150 bits (380), Expect = 4e-42
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 48/235 (20%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L+ ++E++ GGD+M  + ++  L EE  +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187

Query: 78  ARGHIKLSDFGLC-TGLKKSHRTD-F-----Y------RDLSQAKPSDF----------- 113
           + GHIKL+D+G+C  GL+    T  F     Y      R        D+           
Sbjct: 188 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247

Query: 114 -SYPPFC---------SENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDR 162
               PF                 ++ ++     +  P    +S +A   +  F   +   
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVIL--EKQIRIPRS--LSVKAASVLKSFLNKDPKE 303

Query: 163 RLGS--ARGVEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
           RLG     G  +++      FFR VDWD + ++   P   P  +       NFD 
Sbjct: 304 RLGCHPQTGFADIQ---GHPFFRNVDWDMMEQKQVVPPFKP-NISGEFGLDNFDS 354

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 74.7 bits (184), Expect = 4e-15
 Identities = 19/34 (55%), Positives = 26/34 (76%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+YIAPE+     YG + DWW+LGV+M+EM+ 
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+     YG + DWW+LGV+M+EM+ 
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMA 248

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  150 bits (381), Expect = 6e-42
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 39/225 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
           L  +ME+  GG++   L ++   SE+  +FY AE   A+D +H +   ++RD+K +NL+L
Sbjct: 223 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282

Query: 77  DARGHIKLSDFGLC-TGLKKSHRTD------------FYRDLSQAKPSDF---------- 113
           D  GHIK++DFGLC  G+K                     D    +  D+          
Sbjct: 283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342

Query: 114 --SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA-RG 169
                PF +++ ++ +  ++   + + FP    +  EA+  +     +   +RLG     
Sbjct: 343 MCGRLPFYNQDHEKLFELIL--MEEIRFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSED 398

Query: 170 VEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFD 211
            +E+      +FF G+ W H+ E+   P   P QV S  DT  FD
Sbjct: 399 AKEIMQH---RFFAGIVWQHVYEKKLSPPFKP-QVTSETDTRYFD 439

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 72.8 bits (179), Expect = 2e-14
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     YG A DWW LGV+MYEM+
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 343

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  153 bits (387), Expect = 1e-41
 Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 39/225 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY +ME++ GGD+M  + +     E    FY AE A+ +  +   G I+RD+K DN++LD
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476

Query: 78  ARGHIKLSDFGLC-TGLKKSHRT-------DF-----YRDLSQAKPSDF----------- 113
           + GHIK++DFG+C   +     T       D+            K  D+           
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536

Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGS-ARGV 170
               PF  E+  E ++ +M     + +P    +S+EA             +RLG    G 
Sbjct: 537 AGQAPFEGEDEDELFQSIM--EHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGE 592

Query: 171 EELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDD 212
            ++K      FFR +DW+ +  +   P   P +     +  NFD 
Sbjct: 593 RDIK---EHAFFRYIDWEKLERKEIQPPYKP-KASG-RNAENFDR 632

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 75.1 bits (184), Expect = 6e-15
 Identities = 20/34 (58%), Positives = 25/34 (73%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTPDYIAPE+     YG + DWW+ GV++YEML 
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 537

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPE+     YG + DWW+ GV++YEML 
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLA 537

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  142 bits (360), Expect = 3e-38
 Identities = 54/296 (18%), Positives = 103/296 (34%), Gaps = 60/296 (20%)

Query: 18  LYLIMEFLPGGDMM----TLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           L L+M  + GGD+      +        E    FY A+    ++ +H+   I+RD+KP+N
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN 319

Query: 74  LLLDARGHIKLSDFGLC-TGLKKSHRTDFY------------RDLSQAKPSD-FSY---- 115
           +LLD  G++++SD GL         +T  Y                     D F+     
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL 379

Query: 116 -------PPFCSEN----PQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRR 163
                   PF +       +E  ++V+     + +P +   S  +++        + ++R
Sbjct: 380 YEMIAARGPFRARGEKVENKELKQRVLE--QAVTYPDK--FSPASKDFCEALLQKDPEKR 435

Query: 164 LGS-ARGVEELKSLGACQFFRGVDWDHIRER-------PAAIPVQVKSIDDTSNFDDFPD 215
           LG      + L++      FR + W  +          P +  V  K+I D   F     
Sbjct: 436 LGFRDGSCDGLRTH---PLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKG 492

Query: 216 VKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPF----EFSLSSTNPMDSKRR 267
           V  E        D E  ++++          E         + ++   + +D    
Sbjct: 493 VAFE------KADTE-FFQEFASGTCPIPWQEEMIETGVFGDLNVWRPDGVDHHHH 541

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 72.9 bits (179), Expect = 2e-14
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            GTP ++APE+ L   Y  + D+++LGV +YEM+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+ L   Y  + D+++LGV +YEM+
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMI 383

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  137 bits (346), Expect = 3e-36
 Identities = 47/232 (20%), Positives = 83/232 (35%), Gaps = 43/232 (18%)

Query: 18  LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           L L++  + GGD+   +  M +    E    FY AE    ++ +H+   ++RD+KP+N+L
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFY------------RDLSQAKPSD-FSY------- 115
           LD  GHI++SD GL   + +                   ++       D ++        
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378

Query: 116 ----PPFCSENPQ----ETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGS 166
                PF     +    E  R V        +      S +AR    +  C +   RLG 
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVK--EVPEEYSER--FSPQARSLCSQLLCKDPAERLGC 434

Query: 167 -ARGVEELKSLGACQFFRGVDWDHIRER----PAAIPVQVKSIDDTSNFDDF 213
                 E+K       F+ +++  +       P     Q     D  + + F
Sbjct: 435 RGGSAREVKEH---PLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQF 483

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 72.5 bits (178), Expect = 3e-14
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           VGT  Y+APEV     Y  + DWW+LG ++YEM+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     Y  + DWW+LG ++YEM+
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMI 379

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  122 bits (308), Expect = 8e-33
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 31/169 (18%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP
Sbjct: 78  FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDF-----YRDLS----QAKPSDFS-------- 114
           +NLLL + G +K++DFG       S RTD      Y  L     + +  D          
Sbjct: 138 ENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY--LPPEMIEGRMHDEKVDLWSLGV 195

Query: 115 --------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                    PPF +   QETY+++   R    FP  V  +E AR+ I R
Sbjct: 196 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISR 240

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 69.9 bits (172), Expect = 6e-14
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GT DY+ PE+     +    D WSLGV+ YE L
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 55.3 bits (134), Expect = 6e-09
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           + PE+     +    D WSLGV+ YE L
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFL 201

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  121 bits (305), Expect = 3e-32
 Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 31/169 (18%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   +YL++EF P G++   L K     E+ +  ++ E A A+   H+   IHRDIKP
Sbjct: 83  FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDF-----YRDLS----QAKPSDFS-------- 114
           +NLL+  +G +K++DFG         R        Y  L     + K  D          
Sbjct: 143 ENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDY--LPPEMIEGKTHDEKVDLWCAGV 200

Query: 115 --------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                    PPF S +  ET+R+++     L FPP +  S+ +++ I +
Sbjct: 201 LCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFL--SDGSKDLISK 245

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 70.3 bits (173), Expect = 5e-14
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           GT DY+ PE+     +    D W  GV+ YE L
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           + PE+     +    D W  GV+ YE L
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFL 206

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  106 bits (266), Expect = 1e-26
 Identities = 35/176 (19%), Positives = 66/176 (37%), Gaps = 43/176 (24%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K 
Sbjct: 84  FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 143

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKS---HRT------------------DF--------- 101
            NL L+    +K+ DFGL T ++      +                    F         
Sbjct: 144 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 203

Query: 102 --YRDLSQAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
             Y  L          PPF +   +ETY ++   ++    P    I+  A   I +
Sbjct: 204 IMYTLLV-------GKPPFETSCLKETYLRIK--KNEYSIPKH--INPVAASLIQK 248

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 67.2 bits (165), Expect = 7e-13
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+YIAPEV  + G+    D WS+G IMY +L+
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPEV  + G+    D WS+G IMY +L+
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  105 bits (265), Expect = 1e-26
 Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
             D   +YL++E    G+M   L  +    SE   + ++ +    +  +H  G +HRD+ 
Sbjct: 80  FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLT 139

Query: 71  PDNLLLDARGHIKLSDFGLCTGLK-KSHR------TDFYRDLS----QAKPSDFS----- 114
             NLLL    +IK++DFGL T LK    +      T  Y  +S                 
Sbjct: 140 LSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNY--ISPEIATRSAHGLESDVWS 197

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                       PPF ++  + T  KV+        P  +  S EA++ I +
Sbjct: 198 LGCMFYTLLIGRPPFDTDTVKNTLNKVV--LADYEMPSFL--SIEAKDLIHQ 245

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 67.2 bits (165), Expect = 6e-13
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+YI+PE+  ++ +G  +D WSLG + Y +LI
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI 207

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 12/29 (41%), Positives = 20/29 (68%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           I+PE+  ++ +G  +D WSLG + Y +LI
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLI 207

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  105 bits (263), Expect = 6e-26
 Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 43/176 (24%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D   +++++E      ++ L  ++  L+E   ++Y+ +  L    +H+   IHRD+K 
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 169

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKS---HRT------------------DFYRDLSQAKP 110
            NL L+    +K+ DFGL T ++      +                    F  D+     
Sbjct: 170 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV----- 224

Query: 111 SDFS-----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
             +S            PPF +   +ETY ++   ++    P    I+  A   I +
Sbjct: 225 --WSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKH--INPVAASLIQK 274

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
           GTP+YIAPEV  + G+    D WS+G IMY +L+
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
           IAPEV  + G+    D WS+G IMY +L+
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  103 bits (259), Expect = 1e-25
 Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 43/193 (22%)

Query: 2   KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIAETALAIDSIH 60
           +         +     L++ ME+   G +  L+  ++   +         +   A+  IH
Sbjct: 74  RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFS------ 114
             G IHRD+KP N+ +D   ++K+ DFGL   + +S         +    SD        
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193

Query: 115 --------------------------------YPPFCSENPQETYRKVMSWRDTLVFPPE 142
                                           YP           +K+     ++ FPP+
Sbjct: 194 AMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLR--SVSIEFPPD 251

Query: 143 VP--ISEEARETI 153
                 +  ++ I
Sbjct: 252 FDDNKMKVEKKII 264

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 72.0 bits (177), Expect = 2e-14
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 252 FEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTG-YGPAADWWSLGV 310
           F  + +    +D  +              S +GT  Y+A EV   TG Y    D +SLG+
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219

Query: 311 IMYEMLIAPE 320
           I +EM+    
Sbjct: 220 IFFEMIYPFS 229

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  100 bits (252), Expect = 2e-24
 Identities = 36/246 (14%), Positives = 76/246 (30%), Gaps = 62/246 (25%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQ--------FYIAETALAIDSIH-KL 62
           +++   +Y+I E++    ++        L +  T           I     +   IH + 
Sbjct: 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171

Query: 63  GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDF-----Y--------RDLSQAK 109
              HRD+KP N+L+D  G +KLSDFG    +             +               
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGA 231

Query: 110 PSD------------FSYPPFCSE-NPQETYRKVMSWRDTLVFPPEVP------------ 144
             D            ++  PF  + +  E +  +      + +P +              
Sbjct: 232 KVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR--TKNIEYPLDRNHFLYPLTNKKST 289

Query: 145 -----ISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIP 198
                +S E  + +  F       R+      E+       ++    + + +RE    + 
Sbjct: 290 CSNNFLSNEDIDFLKLFLRKNPAERI----TSEDALK---HEWLADTNIEDLREFSKELY 342

Query: 199 VQVKSI 204
            + K +
Sbjct: 343 KKRKKL 348

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 64.8 bits (158), Expect = 8e-12
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEML 316
             + GT +++ PE F       G   D WSLG+ +Y M 
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 98.9 bits (247), Expect = 6e-24
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 31/167 (18%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +LY++ E +  G +M +      LSE+  +FY  +    I+ +H    IHRDIKP NLL+
Sbjct: 112 HLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170

Query: 77  DARGHIKLSDFGLCTGLKKSHR-------TDFY---------RDLSQAKPSD-------- 112
              GHIK++DFG+    K S         T  +         R +   K  D        
Sbjct: 171 GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

Query: 113 ----FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
               F   PF  E     + K+      L FP +  I+E+ ++ I R
Sbjct: 231 YCFVFGQCPFMDERIMCLHSKIK--SQALEFPDQPDIAEDLKDLITR 275

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 277 ALAYSTVGTPDYIAPEVF--LQTGY-GPAADWWSLGVIMYEML 316
           AL  +TVGTP ++APE     +  + G A D W++GV +Y  +
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 96.6 bits (241), Expect = 5e-23
 Identities = 41/166 (24%), Positives = 60/166 (36%), Gaps = 40/166 (24%)

Query: 17  NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            LYL  E   G  +         +L E     Y+ +T LA+  +H  G +H D+KP N+ 
Sbjct: 131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF 189

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTD------FYRDLSQ-------AKPSD-FS-----Y- 115
           L  RG  KL DFGL   L  +   +       Y  ++           +D FS       
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRY--MAPELLQGSYGTAADVFSLGLTILE 247

Query: 116 ------PPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETI 153
                  P   E  Q+  +  +        PPE    +S E R  +
Sbjct: 248 VACNMELPHGGEGWQQLRQGYL--------PPEFTAGLSSELRSVL 285

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                     G P Y+APE+ LQ  YG AAD +SLG+ + E+ 
Sbjct: 208 GTAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVA 249

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 95.8 bits (239), Expect = 7e-23
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L++ MEF   G +   + K+  + L +        +    +D IH    I+RD+KP N+
Sbjct: 94  CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI 153

Query: 75  LLDARGHIKLSDFGLCTGLKKS 96
            L     +K+ DFGL T LK  
Sbjct: 154 FLVDTKQVKIGDFGLVTSLKND 175

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                   + GT  Y++PE      YG   D ++LG+I+ E+L
Sbjct: 173 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 93.9 bits (234), Expect = 5e-22
 Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 43/181 (23%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N
Sbjct: 99  TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157

Query: 74  LLLDARGHIKLSDFGLCTGL--------------------------KKSHRTDFYRDLSQ 107
            L+   G +KL DFG+   +                            S R +       
Sbjct: 158 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216

Query: 108 AKPSD------------FSYPPFCS-ENPQETYRKVMSWRDTLVFPPEVPISEEARETIV 154
           +  SD            +   PF    N       ++     + FP      ++ ++ + 
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDLQDVLK 274

Query: 155 R 155
            
Sbjct: 275 C 275

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 17/67 (25%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLG 337
           +  S VGT +Y+ PE                               ++   P +D WSLG
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSR-----------------ENGKSKSKISPKSDVWSLG 226

Query: 338 VIMYEML 344
            I+Y M 
Sbjct: 227 CILYYMT 233

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 94.4 bits (234), Expect = 1e-21
 Identities = 25/237 (10%), Positives = 64/237 (27%), Gaps = 58/237 (24%)

Query: 16  INLYLIMEFLPG------GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           ++ + +   +          +++      +L          +    + S+H  G +H  +
Sbjct: 178 LSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL 237

Query: 70  KPDNLLLDARGHIKLSDFGLCTGLKKSHRTDF-------------------YRDLSQAKP 110
           +P +++LD RG + L+ F        S  +                     +        
Sbjct: 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297

Query: 111 SD------------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-C 157
            D             +  P   +                +F     I +  R  +  F  
Sbjct: 298 FDTWTLGLAIYWIWCADLPNTDDAALGGSEW--------IFRSCKNIPQPVRALLEGFLR 349

Query: 158 SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFP 214
              + RL   + +E              +++ +R   +A     ++  + +     P
Sbjct: 350 YPKEDRLLPLQAMETP------------EYEQLRTELSAALPLYQTDGEPTREGGAP 394

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 58.9 bits (142), Expect = 7e-10
 Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 5/41 (12%)

Query: 281 STVGTPDYIAPEVFLQTG-----YGPAADWWSLGVIMYEML 316
                P+  A  +             A D W+LG+ +Y + 
Sbjct: 271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 93.2 bits (232), Expect = 1e-21
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 38/168 (22%)

Query: 17  NLYLIMEFLPGGDMMTLLM--KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +LY++M++  GGD+   +   K     E+    +  +  LA+  +H    +HRDIK  N+
Sbjct: 97  SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156

Query: 75  LLDARGHIKLSDFGLCTGLKKSHR-------TDFYRDLS----QAKPSDFS--------- 114
            L   G ++L DFG+   L  +         T +Y  LS    + KP +           
Sbjct: 157 FLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY--LSPEICENKPYNNKSDIWALGCV 214

Query: 115 -------YPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETI 153
                     F + + +    K++S        P V    S + R  +
Sbjct: 215 LYELCTLKHAFEAGSMKNLVLKIISGS-----FPPVSLHYSYDLRSLV 257

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 65.1 bits (159), Expect = 6e-12
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +   LA + +GTP Y++PE+     Y   +D W+LG ++YE+ 
Sbjct: 176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC 219

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 92.5 bits (230), Expect = 2e-21
 Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 43/181 (23%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N
Sbjct: 80  TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 138

Query: 74  LLLDARGHIKLSDFGLCTGL--------------------------KKSHRTDFYRDLSQ 107
            L+   G +KL DFG+   +                            S R +       
Sbjct: 139 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197

Query: 108 AKPSD------------FSYPPFCS-ENPQETYRKVMSWRDTLVFPPEVPISEEARETIV 154
           +  SD            +   PF    N       ++     + FP      ++ ++ + 
Sbjct: 198 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDLQDVLK 255

Query: 155 R 155
            
Sbjct: 256 C 256

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 17/67 (25%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLG 337
           +  S VGT +Y+ PE                               ++   P +D WSLG
Sbjct: 165 VKDSQVGTVNYMPPEAIKDMSSSRENGK-----------------SKSKISPKSDVWSLG 207

Query: 338 VIMYEML 344
            I+Y M 
Sbjct: 208 CILYYMT 214

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 92.0 bits (228), Expect = 4e-21
 Identities = 21/179 (11%), Positives = 46/179 (25%), Gaps = 46/179 (25%)

Query: 16  INLYLIME------FLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           ++ + +           G  +++      +L          +    + S+H  G +H  +
Sbjct: 173 LSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL 232

Query: 70  KPDNLLLDARGHIKLSDFGLCTGLKK----------------SHRTDFYRDLSQAKPSDF 113
           +P +++LD RG + L+ F                        + R        +     F
Sbjct: 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTF 292

Query: 114 S----------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
           S                  P   +                +F     I +  R  +  F
Sbjct: 293 SFDAWALGLVIYWIWCADLPITKDAALGGSEW--------IFRSCKNIPQPVRALLEGF 343

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 17/65 (26%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVI 339
             +  +  +  PE+                       I+     +T    + D W+LG++
Sbjct: 260 VVSSVSRGFEPPEL-----------------EARRATISYHRDRRTLMTFSFDAWALGLV 302

Query: 340 MYEML 344
           +Y + 
Sbjct: 303 IYWIW 307

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 91.4 bits (227), Expect = 8e-21
 Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 43/181 (23%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               +Y++ME     D+ + L KK ++     + Y      A+ +IH+ G +H D+KP N
Sbjct: 127 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185

Query: 74  LLLDARGHIKLSDFGLCTGL--------------------------KKSHRTDFYRDLSQ 107
            L+   G +KL DFG+   +                            S R +       
Sbjct: 186 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244

Query: 108 AKPSD------------FSYPPFCS-ENPQETYRKVMSWRDTLVFPPEVPISEEARETIV 154
           +  SD            +   PF    N       ++     + FP      ++ ++ + 
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI--PEKDLQDVLK 302

Query: 155 R 155
            
Sbjct: 303 C 303

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 17/67 (25%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLG 337
           +  S VG  +Y+ PE                               ++   P +D WSLG
Sbjct: 212 VKDSQVGAVNYMPPEAIKDMSSSR-----------------ENGKSKSKISPKSDVWSLG 254

Query: 338 VIMYEML 344
            I+Y M 
Sbjct: 255 CILYYMT 261

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 90.4 bits (225), Expect = 9e-21
 Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 39/187 (20%)

Query: 5   ACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL 54
             +K L           +     LYLIME+  GG++   L+    + E+  +    +   
Sbjct: 66  RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125

Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTD-------------F 101
           A+   H+   +HRD+K +NLLLDA  +IK++DFG         + D             F
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF 185

Query: 102 YRDLSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEA 149
                     D                PF  +N +E   +V+  +  +  P  +  S + 
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFYM--STDC 241

Query: 150 RETIVRF 156
              + RF
Sbjct: 242 ENLLKRF 248

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.0 bits (133), Expect = 9e-09
 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
           G P Y APE+F    Y GP  D WSLGVI+Y ++
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 46.1 bits (110), Expect = 7e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
           APE+F    Y GP  D WSLGVI+Y ++
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLV 208

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 88.0 bits (219), Expect = 4e-20
 Identities = 26/79 (32%), Positives = 48/79 (60%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +S P + +++ME++ GG++   + K   + E   +    +   A+D  H+   +HRD+KP
Sbjct: 80  ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139

Query: 72  DNLLLDARGHIKLSDFGLC 90
           +N+LLDA  + K++DFGL 
Sbjct: 140 ENVLLDAHMNAKIADFGLS 158

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
           G+P+Y APEV     Y GP  D WS GVI+Y +L
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
           APEV     Y GP  D WS GVI+Y +L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALL 205

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 87.8 bits (218), Expect = 6e-20
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 17  NLYLIMEFLPGGD----MMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
             +L++ F   G     +  L  K + L+E+   + +      +++IH  G+ HRD+KP 
Sbjct: 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPT 163

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRT 99
           N+LL   G   L D G           
Sbjct: 164 NILLGDEGQPVLMDLGSMNQACIHVEG 190

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 280 YSTVGTPDYIAPEVFLQTGY---GPAADWWSLGVIMYEML 316
            +   T  Y APE+F    +       D WSLG ++Y M+
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 87.7 bits (218), Expect = 7e-20
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 12  MSDPINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
                   L++E  LP  D+   + +K  L E  ++ +  +   AI   H  G +HRDIK
Sbjct: 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIK 166

Query: 71  PDNLLLDA-RGHIKLSDFGLCTGLKKSHRTDF 101
            +N+L+D  RG  KL DFG    L     TDF
Sbjct: 167 DENILIDLRRGCAKLIDFGSGALLHDEPYTDF 198

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
             GT  Y  PE   +  Y    A  WSLG+++Y+M+
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 87.9 bits (218), Expect = 7e-20
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 11/102 (10%)

Query: 5   ACLKQLR----------MSDPINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETA 53
           A L ++             +     L+ME    G D+   + +   L E    +   +  
Sbjct: 81  AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140

Query: 54  LAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
            A+  +     IHRDIK +N+++     IKL DFG    L++
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
             GT +Y APEV +   Y GP  + WSLGV +Y ++
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 86.6 bits (215), Expect = 1e-19
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 8   KQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLS---EECTQFYIAETALAIDSIHKLGF 64
           K    S  + LY+ M+     ++   +  + T+             + A A++ +H  G 
Sbjct: 80  KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGL 139

Query: 65  IHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
           +HRD+KP N+       +K+ DFGL T + + 
Sbjct: 140 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 18/67 (26%), Positives = 28/67 (41%)

Query: 254 FSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMY 313
           F L +    D + +         A     VGT  Y++PE      Y    D +SLG+I++
Sbjct: 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILF 221

Query: 314 EMLIAPE 320
           E+L    
Sbjct: 222 ELLYPFS 228

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 30/172 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
                +L+ + +  G++   L +K TLSE+ T+  +      I ++HKL  +HRD+KP+N
Sbjct: 95  TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN 154

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR------TDFY--------RDLSQAKPSDFS----- 114
           +LLD   +IKL+DFG    L    +      T  Y                         
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                       PPF         R +MS       P     S+  ++ + R
Sbjct: 215 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 22/63 (34%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMY 341
             GTP Y+APE+                      +         GYG   D WS GVIMY
Sbjct: 183 VCGTPSYLAPEI----------------------IECSMNDNHPGYGKEVDMWSTGVIMY 220

Query: 342 EML 344
            +L
Sbjct: 221 TLL 223

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 88.2 bits (219), Expect = 2e-19
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 26/168 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D    YL+ E   GG++   ++ +   SE      I +    I  +HK   +HRD+KP+N
Sbjct: 97  DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 156

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHR------TDFYRD---LSQA--KPSDF------ 113
           LLL+++    +I++ DFGL T  + S +      T +Y     L     +  D       
Sbjct: 157 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 216

Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                   PPF   N  +  +KV   + T   P    +SE A++ I +
Sbjct: 217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             +GT  YIAPEV L   Y    D WS GVI+Y +L
Sbjct: 187 DKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 28/80 (35%), Positives = 44/80 (55%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             +    YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133

Query: 72  DNLLLDARGHIKLSDFGLCT 91
           +NLLLD R ++K+SDFGL T
Sbjct: 134 ENLLLDERDNLKISDFGLAT 153

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
            NR  L     GT  Y+APE+  +  +     D WS G+++  ML
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 26/168 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D    YL+ EF  GG++   ++ +    E      + +    I  +HK   +HRDIKP+N
Sbjct: 117 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPEN 176

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHR------TDFYRD---LSQA--KPSDF------ 113
           +LL+ +    +IK+ DFGL +   K ++      T +Y     L +   +  D       
Sbjct: 177 ILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVI 236

Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                  YPPF  +N Q+  +KV   +    F     IS+EA+E I  
Sbjct: 237 MYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKL 284

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             +GT  YIAPEV L+  Y    D WS GVIMY +L
Sbjct: 207 DRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILL 241

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 85.4 bits (212), Expect = 3e-19
 Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 45/174 (25%)

Query: 18  LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGF-----IHRD 68
           LY++ME+  GGD+ +++ K    +  L EE     + +  LA+   H+        +HRD
Sbjct: 82  LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141

Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHR-------TDFYRDLS----QAKPSDFS--- 114
           +KP N+ LD + ++KL DFGL   L            T +Y  +S         +     
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY--MSPEQMNRMSYNEKSDI 199

Query: 115 -------------YPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETI 153
                         PPF + + +E   K+   +        +P   S+E  E I
Sbjct: 200 WSLGCLLYELCALMPPFTAFSQKELAGKIREGK-----FRRIPYRYSDELNEII 248

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +  + A + VGTP Y++PE   +  Y   +D WSLG ++YE+ 
Sbjct: 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 86.0 bits (213), Expect = 3e-19
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           +   +  LIMEF P G + T+L +      L E      + +    ++ + + G +HR+I
Sbjct: 79  TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNI 138

Query: 70  KPDNLLL----DARGHIKLSDFGLCTGLKKSH 97
           KP N++     D +   KL+DFG    L+   
Sbjct: 139 KPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 61.7 bits (150), Expect = 7e-11
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 16/60 (26%)

Query: 278 LAYSTVGTPDYIAPEVF--------LQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
              S  GT +Y+ P+++         Q  YG   D WS+GV  Y           TG  P
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA--------TGSLP 222

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 86.3 bits (213), Expect = 4e-19
 Identities = 28/177 (15%), Positives = 52/177 (29%), Gaps = 37/177 (20%)

Query: 16  INLYLIMEFLPGGDMMTLL-------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
            N  L+M      D+  L        + +            A+      ++   G +H  
Sbjct: 161 ANYLLLMP-AASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219

Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKKSHR----TDFYR--DLSQAKPSDFSY------- 115
             PDNL +   G + L D      +            Y   +   A  + F++       
Sbjct: 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQL 279

Query: 116 -----------PPFCSENP--QETYRKVM---SWRDTLVFPPEVPISEEARETIVRF 156
                       PF    P  + ++++        D+L F    P+ +  +  I RF
Sbjct: 280 GLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRF 336

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 55.8 bits (134), Expect = 6e-09
 Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 3/39 (7%)

Query: 281 STVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEML 316
                P   AP  FL      +  A + W LG+ +Y + 
Sbjct: 249 PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 85.4 bits (212), Expect = 6e-19
 Identities = 28/80 (35%), Positives = 44/80 (55%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             +    YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133

Query: 72  DNLLLDARGHIKLSDFGLCT 91
           +NLLLD R ++K+SDFGL T
Sbjct: 134 ENLLLDERDNLKISDFGLAT 153

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
            NR  L     GT  Y+APE+  +  +     D WS G+++  ML
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 86.7 bits (215), Expect = 6e-19
 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 30/170 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  + Y++ E   GG++   ++K+   SE      I +    I  +HK   +HRD+KP+N
Sbjct: 92  DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN 151

Query: 74  LLL---DARGHIKLSDFGLCTGLKKSHR------TDFY-------RDLSQAKPSDF---- 113
           +LL   +    IK+ DFGL T  +++ +      T +Y             +  D     
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD--EKCDVWSAG 209

Query: 114 --------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                     PPF  +N  +  ++V + +     P    IS++A++ I +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 62.4 bits (152), Expect = 6e-11
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             +GT  YIAPEV L+  Y    D WS GVI+Y +L
Sbjct: 182 DRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 86.7 bits (215), Expect = 7e-19
 Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 26/168 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  N YL+ME   GG++   ++ +   +E      I +    +  +HK   +HRD+KP+N
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN 166

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHR------TDFYRD---LSQA--KPSD------- 112
           LLL+++     IK+ DFGL    +   +      T +Y     L +   +  D       
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVI 226

Query: 113 -----FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                  YPPF  +  QE  RKV   + T   P    +SE A++ I +
Sbjct: 227 LFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ 274

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             +GT  YIAPEV L+  Y    D WS+GVI++ +L
Sbjct: 197 ERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILL 231

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 86.1 bits (213), Expect = 7e-19
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRD 68
            +   +  LIMEF P G + T+L +      L E      + +    ++ + + G +HR+
Sbjct: 78  ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN 137

Query: 69  IKPDNLLL----DARGHIKLSDFGLCTGLKKSH 97
           IKP N++     D +   KL+DFG    L+   
Sbjct: 138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 62.6 bits (152), Expect = 5e-11
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 16/60 (26%)

Query: 278 LAYSTVGTPDYIAPEVF--------LQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
              S  GT +Y+ P+++         Q  YG   D WS+GV  Y           TG  P
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA--------TGSLP 222

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 85.1 bits (211), Expect = 7e-19
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 12  MSDPINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
              P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK
Sbjct: 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 176

Query: 71  PDNLLLDA-RGHIKLSDFGLCTGLKKSHRTDF 101
            +N+L+D  RG +KL DFG    LK +  TDF
Sbjct: 177 DENILIDLNRGELKLIDFGSGALLKDTVYTDF 208

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
             GT  Y  PE      Y G +A  WSLG+++Y+M+
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 86.0 bits (213), Expect = 1e-18
 Identities = 26/79 (32%), Positives = 50/79 (63%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +S P +++++ME++ GG++   + K   L E+ ++    +    +D  H+   +HRD+KP
Sbjct: 85  ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKP 144

Query: 72  DNLLLDARGHIKLSDFGLC 90
           +N+LLDA  + K++DFGL 
Sbjct: 145 ENVLLDAHMNAKIADFGLS 163

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
           G+P+Y APEV     Y GP  D WS GVI+Y +L
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
           APEV     Y GP  D WS GVI+Y +L
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALL 210

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 83.9 bits (208), Expect = 1e-18
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L++IME+L GG  + L ++   L E      + E    +D +H    IHRDIK  N+LL
Sbjct: 94  KLWIIMEYLGGGSALDL-LEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 152

Query: 77  DARGHIKLSDFGLCTGLKKS 96
              G +KL+DFG+   L  +
Sbjct: 153 SEHGEVKLADFGVAGQLTDT 172

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           VGTP ++APEV  Q+ Y   AD WSLG+   E+
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV  Q+ Y   AD WSLG+   E+
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIEL 212

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 83.6 bits (207), Expect = 2e-18
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L+++MEFL GG + T ++ +  L+EE           A+  +H  G IHRDIK D++LL
Sbjct: 116 ELWVLMEFLQGGAL-TDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174

Query: 77  DARGHIKLSDFGLCTGLKKS 96
              G +KLSDFG C  + K 
Sbjct: 175 TLDGRVKLSDFGFCAQISKD 194

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           S VGTP ++APEV  ++ Y    D WSLG+++ EM
Sbjct: 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV  ++ Y    D WSLG+++ EM
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEM 234

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 84.0 bits (208), Expect = 3e-18
 Identities = 37/172 (21%), Positives = 61/172 (35%), Gaps = 30/172 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               ++L+ + +  G++   L +K  LSE+ T+  +     A+  +H    +HRD+KP+N
Sbjct: 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPEN 230

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR------TDFY--------RDLSQAKPSDFS----- 114
           +LLD    I+LSDFG    L+   +      T  Y                         
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                       PPF         R +M  +     P     S   ++ I R
Sbjct: 291 CGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR 342

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 22/63 (34%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMY 341
             GTP Y+APE+                      L         GYG   D W+ GVI++
Sbjct: 259 LCGTPGYLAPEI----------------------LKCSMDETHPGYGKEVDLWACGVILF 296

Query: 342 EML 344
            +L
Sbjct: 297 TLL 299

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 83.4 bits (206), Expect = 3e-18
 Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%)

Query: 1   MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQ---FYIAETALAID 57
                  +    S  + LY+ M+     ++   + ++ +L +           + A A++
Sbjct: 119 STKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVE 178

Query: 58  SIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
            +H  G +HRD+KP N+       +K+ DFGL T + + 
Sbjct: 179 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 61.8 bits (150), Expect = 6e-11
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 254 FSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMY 313
           F L +    D + +         A     VGT  Y++PE      Y    D +SLG+I++
Sbjct: 208 FGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF 267

Query: 314 EMLIAPE 320
           E+L +  
Sbjct: 268 ELLYSFS 274

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 82.4 bits (204), Expect = 4e-18
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L+++ME+L GG + T ++ +  + E        E   A++ +H    IHRDIK DN+LL
Sbjct: 91  ELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149

Query: 77  DARGHIKLSDFGLCTGL--KKSHRTDF 101
              G +KL+DFG C  +  ++S R+  
Sbjct: 150 GMDGSVKLTDFGFCAQITPEQSKRSTM 176

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 18/35 (51%), Positives = 24/35 (68%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           + VGTP ++APEV  +  YGP  D WSLG++  EM
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV  +  YGP  D WSLG++  EM
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEM 209

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 83.1 bits (206), Expect = 4e-18
 Identities = 24/79 (30%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           ++ P ++ +++E+  GG++   +++K  ++E+  + +  +   AI+  H+   +HRD+KP
Sbjct: 78  ITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP 136

Query: 72  DNLLLDARGHIKLSDFGLC 90
           +NLLLD   ++K++DFGL 
Sbjct: 137 ENLLLDDNLNVKIADFGLS 155

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
           G+P+Y APEV     Y GP  D WS G+++Y ML
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVML 202

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
           APEV     Y GP  D WS G+++Y ML
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVML 202

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 83.4 bits (206), Expect = 4e-18
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 17  NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L+++  F+  G    L+     D ++E    + +     A+D IH +G++HR +K  ++
Sbjct: 100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHI 159

Query: 75  LLDARGHIKLSDFGLC-----TGLKKSHRTDFYRD 104
           L+   G + LS           G ++    DF + 
Sbjct: 160 LISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKY 194

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 47.6 bits (113), Expect = 3e-06
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEM 315
             ++        +V    +++PEV  Q   GY   +D +S+G+   E+
Sbjct: 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACEL 230

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 81.9 bits (203), Expect = 5e-18
 Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 37/175 (21%)

Query: 14  DPINLYLIMEFLPGGD----MMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           D  N+Y++ME   GG+    +++   +   LSE      + +   A+   H    +H+D+
Sbjct: 91  DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150

Query: 70  KPDNLLLDAR---GHIKLSDFGLCTGLKKSHR------TDFY-------RDLSQAKPSDF 113
           KP+N+L         IK+ DFGL    K          T  Y       RD++     D 
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVT--FKCDI 208

Query: 114 ------------SYPPFCSENPQETYRKVMSWRDTLVFPPEV-PISEEARETIVR 155
                          PF   + +E  +K         +  E  P++ +A + + +
Sbjct: 209 WSAGVVMYFLLTGCLPFTGTSLEEVQQKAT--YKEPNYAVECRPLTPQAVDLLKQ 261

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            GT  Y+APEV  +       D WS GV+MY +L
Sbjct: 187 AGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLL 219

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 82.4 bits (204), Expect = 6e-18
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 7   LKQLRMSDPINLYLIMEFLPGGDMMTLLM--KKDTLSEECTQFYIAETALAIDSIHKLGF 64
           +K+        L+L+MEF   G +  L+   K +TL EE   +   E    +  +H+   
Sbjct: 91  IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV 150

Query: 65  IHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
           IHRDIK  N+LL     +KL DFG+   L ++
Sbjct: 151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)

Query: 283 VGTPDYIAPEV-----FLQTGYGPAADWWSLGVIMYEM 315
           +GTP ++APEV          Y   +D WSLG+   EM
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 82.5 bits (204), Expect = 7e-18
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            + + ME L GG +  L+ +   L E+   +Y+ +    ++ +H    +H D+K DN+LL
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183

Query: 77  DARG-HIKLSDFGLCTGLKKSHRTD 100
            + G    L DFG    L+      
Sbjct: 184 SSDGSRAALCDFGHALCLQPDGLGK 208

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 12/53 (22%), Positives = 17/53 (32%)

Query: 264 SKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +                   GT  ++APEV +        D WS   +M  ML
Sbjct: 198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 46.7 bits (111), Expect = 5e-06
 Identities = 10/27 (37%), Positives = 12/27 (44%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV +        D WS   +M  ML
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHML 250

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 81.9 bits (202), Expect = 1e-17
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 16/94 (17%)

Query: 17  NLYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
              L+ E    G ++  +          + +     +       I+ +H    IH DIKP
Sbjct: 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKP 200

Query: 72  DNLLL-----------DARGHIKLSDFGLCTGLK 94
           DN +L           D    + L D G    +K
Sbjct: 201 DNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK 234

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 6/39 (15%), Positives = 15/39 (38%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  +   T  +   E+     +    D++ +   +Y ML
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 5/28 (17%), Positives = 11/28 (39%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
              E+     +    D++ +   +Y ML
Sbjct: 252 QCVEMLSNKPWNYQIDYFGVAATVYCML 279

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 81.3 bits (201), Expect = 1e-17
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)

Query: 17  NLYLIMEFLPGG---DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +L+++ME+   G   D++ L  +  TL+E+     +  T   ++ +H +  IHRDIK  N
Sbjct: 98  DLWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGN 155

Query: 74  LLLDARGHIKLSDFGLCTGLK--KSHRTDF 101
           +LL+  GH KL+DFG+   L    + R   
Sbjct: 156 ILLNTEGHAKLADFGVAGQLTDTMAKRNTV 185

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           +GTP ++APEV  + GY   AD WSLG+   EM
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV  + GY   AD WSLG+   EM
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEM 218

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 17  NLYLIMEFLPGGDMMTLL----MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            L +++E    GD+  ++     +K  + E     Y  +   A++ +H    +HRDIKP 
Sbjct: 106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPA 165

Query: 73  NLLLDARGHIKLSDFGLCTGL 93
           N+ + A G +KL D GL    
Sbjct: 166 NVFITATGVVKLGDLGLGRFF 186

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           ++   A+S VGTP Y++PE   + GY   +D WSLG ++YEM 
Sbjct: 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 230

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 81.3 bits (201), Expect = 2e-17
 Identities = 23/79 (29%), Positives = 34/79 (43%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
             +L+ME+  G     L + K  L E             +  +H    IHRD+K  N+LL
Sbjct: 128 TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL 187

Query: 77  DARGHIKLSDFGLCTGLKK 95
              G +KL DFG  + +  
Sbjct: 188 SEPGLVKLGDFGSASIMAP 206

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 283 VGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEM 315
           VGTP ++APEV L   +  Y    D WSLG+   E+
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 38/173 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +  ++ LI+E + GG++   L +K++LSEE    +I +    ++ +H     H D+KP+N
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN 145

Query: 74  LLLDAR----GHIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS---- 114
           ++L  +     HIKL DFGL   ++       ++++              +P        
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202

Query: 115 ------------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                         PF  +  QET   +     +  F  E     SE A++ I
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANIT--AVSYDFDEEFFSQTSELAKDFI 253

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             GTP+++APE+      G  AD WS+GVI Y +L
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 212

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+      G  AD WS+GVI Y +L
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILL 212

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 80.8 bits (200), Expect = 2e-17
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 38/173 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +  ++ LI+E + GG++   L +K++LSEE    +I +    ++ +H     H D+KP+N
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN 145

Query: 74  LLL----DARGHIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS---- 114
           ++L        HIKL DFGL   ++       ++++              +P        
Sbjct: 146 IMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202

Query: 115 ------------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                         PF  +  QET   +     +  F  E     SE A++ I
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANIT--SVSYDFDEEFFSHTSELAKDFI 253

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             GTP+++APE+      G  AD WS+GVI Y +L
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 212

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+      G  AD WS+GVI Y +L
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILL 212

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)

Query: 17  NLYLIMEFLPGG---DMMTLLMKKD-----TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
            L+L+M+ L GG   D++  ++ K       L E      + E    ++ +HK G IHRD
Sbjct: 87  ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD 146

Query: 69  IKPDNLLLDARGHIKLSDFGLCTGL 93
           +K  N+LL   G ++++DFG+   L
Sbjct: 147 VKAGNILLGEDGSVQIADFGVSAFL 171

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEM 315
           A      R  +  + VGTP ++APEV  Q  GY   AD WS G+   E+
Sbjct: 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 27/167 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +    YL+ + + GG++   ++ ++  SE      I +   +I   H  G +HR++KP+N
Sbjct: 76  EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN 135

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDF----- 113
           LLL ++     +KL+DFGL   +  S        T  Y      +    +KP D      
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 195

Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
                   YPPF  E+    Y ++ +       P    ++ EA+  I
Sbjct: 196 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 64.9 bits (159), Expect = 4e-12
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +   GTP Y++PEV  +  Y    D W+ GVI+Y +L
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++PEV  +  Y    D W+ GVI+Y +L
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILL 201

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 80.1 bits (198), Expect = 3e-17
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 17  NLYLIMEFLPGG---DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            L++++EF PGG    +M  L +   L+E   Q    +   A++ +H    IHRD+K  N
Sbjct: 90  KLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN 147

Query: 74  LLLDARGHIKLSDFGLCTGLKKS 96
           +L+   G I+L+DFG+     K+
Sbjct: 148 VLMTLEGDIRLADFGVSAKNLKT 170

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 5/38 (13%)

Query: 283 VGTPDYIAPEV-----FLQTGYGPAADWWSLGVIMYEM 315
           +GTP ++APEV        T Y   AD WSLG+ + EM
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 79.6 bits (197), Expect = 3e-17
 Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 30/170 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  + Y++ E   GG++   ++K+   SE      I +    I  +HK   +HRD+KP+N
Sbjct: 92  DSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN 151

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHR------TDFY---RDLSQA--KPSDF------ 113
           +LL+++     IK+ DFGL T  +++ +      T +Y     L     +  D       
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVI 211

Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                   PPF  +N  +  ++V        F       IS++A++ I +
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVE--TGKYAFDLPQWRTISDDAKDLIRK 259

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
              +GT  YIAPEV L+  Y    D WS GVI+Y +L
Sbjct: 181 KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 24/82 (29%), Positives = 41/82 (50%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY+ M  + G D+  +L ++  L+       + +   A+D+ H  G  HRD+KP+N+L+ 
Sbjct: 109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168

Query: 78  ARGHIKLSDFGLCTGLKKSHRT 99
           A     L DFG+ +       T
Sbjct: 169 ADDFAYLVDFGIASATTDEKLT 190

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +TVGT  Y+APE F ++     AD ++L  ++YE L
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECL 229

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 27/170 (15%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            +    YL+ + + GG++   ++ ++  SE      I +   +I   H  G +HR++KP+
Sbjct: 98  QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPE 157

Query: 73  NLLLDARG---HIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDF-S-- 114
           NLLL ++     +KL+DFGL   +  S        T  Y      +    +KP D  +  
Sbjct: 158 NLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217

Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                    YPPF  E+    Y ++ +       P    ++ EA+  I  
Sbjct: 218 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 267

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 65.0 bits (159), Expect = 6e-12
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +   GTP Y++PEV  +  Y    D W+ GVI+Y +L
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++PEV  +  Y    D W+ GVI+Y +L
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILL 224

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 78.8 bits (195), Expect = 6e-17
 Identities = 43/168 (25%), Positives = 64/168 (38%), Gaps = 26/168 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  ++YL+ME   GG++   ++ K    E      + +   A+   HKL   HRD+KP+N
Sbjct: 77  DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN 136

Query: 74  LLLDARGH---IKLSDFGLCTGLKKSHR------TDFY---RDLSQA--KPSD-FS---- 114
            L         +KL DFGL    K          T +Y   + L        D +S    
Sbjct: 137 FLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVM 196

Query: 115 -------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                  YPPF +    E   K+     T      + +S +A   I R
Sbjct: 197 MYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 60.7 bits (148), Expect = 9e-11
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + VGTP Y++P+V L+  YGP  D WS GV+MY +L
Sbjct: 167 TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLL 201

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 80.7 bits (199), Expect = 7e-17
 Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 37/172 (21%)

Query: 14  DPINLYLIMEFLPGGDMM-TLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   + +I EF+ GG++   +  + + +SE+    Y+ +    +  +H+  ++H D+KP+
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284

Query: 73  NLLLDARG--HIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS----- 114
           N++   +    +KL DFGL   L         +  +           + KP  +      
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWS 341

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                        PF  EN  ET R V                ISE+ ++ I
Sbjct: 342 VGVLSYILLSGLSPFGGENDDETLRNVK--SCDWNMDDSAFSGISEDGKDFI 391

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 59.8 bits (145), Expect = 4e-10
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            GT ++ APEV      G   D WS+GV+ Y +L
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 350

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APEV      G   D WS+GV+ Y +L
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILL 350

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 79.2 bits (196), Expect = 7e-17
 Identities = 21/71 (29%), Positives = 43/71 (60%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ A
Sbjct: 92  YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151

Query: 79  RGHIKLSDFGL 89
              +K+ DFG+
Sbjct: 152 TNAVKVMDFGI 162

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + +GT  Y++PE          +D +SLG ++YE+L
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 78.8 bits (195), Expect = 7e-17
 Identities = 35/173 (20%), Positives = 69/173 (39%), Gaps = 38/173 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +  ++ LI+E + GG++   L +K++L+E+    ++ +    +  +H     H D+KP+N
Sbjct: 79  NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPEN 138

Query: 74  LLLDAR----GHIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS---- 114
           ++L  +      IKL DFG+   ++     + ++++              +P        
Sbjct: 139 IMLLDKNVPNPRIKLIDFGIAHKIEAG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 195

Query: 115 ------------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                         PF  E  QET   +        F  E     SE A++ I
Sbjct: 196 SIGVITYILLSGASPFLGETKQETLTNIS--AVNYDFDEEYFSNTSELAKDFI 246

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             GTP+++APE+      G  AD WS+GVI Y +L
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 205

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 49.1 bits (118), Expect = 7e-07
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+      G  AD WS+GVI Y +L
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILL 205

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 78.4 bits (194), Expect = 9e-17
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           YL+ME++ G  +   +     LS +    +  +    I   H +  +HRDIKP N+L+D+
Sbjct: 87  YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146

Query: 79  RGHIKLSDFGLCTGLKKSHRT 99
              +K+ DFG+   L ++  T
Sbjct: 147 NKTLKIFDFGIAKALSETSLT 167

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 276 RALAYST-------VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +AL+ ++       +GT  Y +PE           D +S+G+++YEML
Sbjct: 159 KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 41/178 (23%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+ G IHRD+KP+N
Sbjct: 210 DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN 269

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHRTDFYRD------------LSQAKPSDFS---- 114
           +LL ++     IK++DFG     K    T   R             L     + ++    
Sbjct: 270 VLLSSQEEDCLIKITDFGH---SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 326

Query: 115 --------------YPPFCSENPQET-YRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                         YPPF     Q +   ++        F PEV   +SE+A + + +
Sbjct: 327 CWSLGVILFICLSGYPPFSEHRTQVSLKDQIT--SGKYNFIPEVWAEVSEKALDLVKK 382

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 283 VGTPDYIAPEVFLQT---GYGPAADWWSLGVIMYEML 316
            GTP Y+APEV +     GY  A D WSLGVI++  L
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 317 IAPEVFLQT---GYGPAADWWSLGVIMYEML 344
           +APEV +     GY  A D WSLGVI++  L
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 11  RMSDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHR 67
           +++      L ME+  GGD+   L + +    L E   +  +++ + A+  +H+   IHR
Sbjct: 86  KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR 145

Query: 68  DIKPDNLLLDARGH---IKLSDFGL 89
           D+KP+N++L         K+ D G 
Sbjct: 146 DLKPENIVLQPGPQRLIHKIIDLGY 170

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 67.8 bits (165), Expect = 1e-12
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
           L    VGT  Y+APE+  Q  Y    D+WS G + +E +        TG+ P
Sbjct: 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI--------TGFRP 222

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 53.5 bits (128), Expect = 5e-08
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+  Q  Y    D+WS G + +E +
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECI 217

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 41/175 (23%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + Y+++E + GG++   ++    L E   + Y  +  LA+  +H+ G IHRD+KP+N+LL
Sbjct: 88  DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL 147

Query: 77  DARG---HIKLSDFGLCTGLKKSHRTDFYRD------------LSQAKPSDFS------- 114
            ++     IK++DFG     K    T   R             L     + ++       
Sbjct: 148 SSQEEDCLIKITDFGHS---KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204

Query: 115 -----------YPPFCSENPQET-YRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                      YPPF     Q +   ++        F PEV   +SE+A + + +
Sbjct: 205 LGVILFICLSGYPPFSEHRTQVSLKDQIT--SGKYNFIPEVWAEVSEKALDLVKK 257

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 282 TVGTPDYIAPEVFLQT---GYGPAADWWSLGVIMYEML 316
             GTP Y+APEV +     GY  A D WSLGVI++  L
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 317 IAPEVFLQT---GYGPAADWWSLGVIMYEML 344
           +APEV +     GY  A D WSLGVI++  L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 38/173 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +  ++ LI+E + GG++   L +K++L+EE    ++ +    +  +H L   H D+KP+N
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN 144

Query: 74  LLLDAR----GHIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS---- 114
           ++L  R      IK+ DFGL   +   +    ++++              +P        
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMW 201

Query: 115 ------------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                         PF  +  QET   V        F  E     S  A++ I
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVS--AVNYEFEDEYFSNTSALAKDFI 252

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 62.3 bits (152), Expect = 5e-11
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             GTP+++APE+      G  AD WS+GVI Y +L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+      G  AD WS+GVI Y +L
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILL 211

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 77.2 bits (191), Expect = 3e-16
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 30/170 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
              + YL+M+ + GG++   ++++   +E+     I +   A+  +H+ G +HRD+KP+N
Sbjct: 77  STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPEN 136

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHRTDF-----Y------RDLSQAKPSDF------ 113
           LL         I ++DFGL    +    +       Y           +K  D       
Sbjct: 137 LLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196

Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                  YPPF  E   + + K+        F       ISE A++ I  
Sbjct: 197 TYILLCGYPPFYEETESKLFEKIK--EGYYEFESPFWDDISESAKDFICH 244

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 19/37 (51%), Positives = 23/37 (62%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 52.2 bits (126), Expect = 7e-08
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILL 201

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 77.3 bits (191), Expect = 3e-16
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 15  PINLYLIMEFLPGG--DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
              +Y++ME+   G  +M+  + +K          Y  +    ++ +H  G +H+DIKP 
Sbjct: 80  KQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPG 138

Query: 73  NLLLDARGHIKLSDFGLC 90
           NLLL   G +K+S  G+ 
Sbjct: 139 NLLLTTGGTLKISALGVA 156

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 284 GTPDYIAPEVFL-QTGY-GPAADWWSLGVIMYEML 316
           G+P +  PE+      + G   D WS GV +Y + 
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT 207

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 77.5 bits (191), Expect = 3e-16
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 3   DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQFYIAETALAIDSI 59
             A + +         +L++  L  G ++  L K   +  LS +       +T  A+  +
Sbjct: 93  SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152

Query: 60  HKLG--FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTD 100
           H+     IHRD+K +NLLL  +G IKL DFG  T +       
Sbjct: 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS 195

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 254 FSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGV 310
           F  ++T          + ++       +   TP Y  PE+         G   D W+LG 
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGC 241

Query: 311 IMYEML 316
           I+Y + 
Sbjct: 242 ILYLLC 247

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 77.8 bits (192), Expect = 4e-16
 Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 37/172 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
              ++ L+ME++ GG++   ++ +   L+E  T  ++ +    I  +H++  +H D+KP+
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPE 216

Query: 73  NLLLDARG--HIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS----- 114
           N+L   R    IK+ DFGL    K   +    +                    F      
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWS 273

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                        PF  +N  ET   ++          E    ISEEA+E I
Sbjct: 274 VGVIAYMLLSGLSPFLGDNDAETLNNIL--ACRWDLEDEEFQDISEEAKEFI 323

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            GTP+++APEV          D WS+GVI Y +L
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV          D WS+GVI Y +L
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLL 282

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 77.4 bits (191), Expect = 4e-16
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +  P +L +IME+  GG++   +      SE+  +F+  +    +   H +   HRD+K 
Sbjct: 85  ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKL 144

Query: 72  DNLLLDA--RGHIKLSDFGLC 90
           +N LLD      +K+ DFG  
Sbjct: 145 ENTLLDGSPAPRLKICDFGYS 165

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 61.6 bits (150), Expect = 8e-11
 Identities = 24/37 (64%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
           STVGTP YIAPEV L+  Y G  AD WS GV +Y ML
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 76.2 bits (188), Expect = 7e-16
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            + + ME +PGG +  LL  K      +E+   FY  +    +  +H    +HRDIK DN
Sbjct: 93  FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN 152

Query: 74  LLLDAR-GHIKLSDFGLCTGLKKSH 97
           +L++   G +K+SDFG    L   +
Sbjct: 153 VLINTYSGVLKISDFGTSKRLAGIN 177

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 281 STVGTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEML 316
           +  GT  Y+APE+  +   GYG AAD WSLG  + EM 
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA 219

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 77.1 bits (190), Expect = 7e-16
 Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 37/172 (21%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   + LI+EFL GG++   +  +D  +SE     Y+ +    +  +H+   +H DIKP+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178

Query: 73  NLLLDARG--HIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS----- 114
           N++ + +    +K+ DFGL T L         +  +             +P  F      
Sbjct: 179 NIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWA 235

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                        PF  E+  ET + V   R    F  +    +S EA++ I
Sbjct: 236 IGVLGYVLLSGLSPFAGEDDLETLQNVK--RCDWEFDEDAFSSVSPEAKDFI 285

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           T  T ++ APE+  +   G   D W++GV+ Y +L
Sbjct: 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 244

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE+  +   G   D W++GV+ Y +L
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLL 244

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 75.8 bits (187), Expect = 1e-15
 Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 39/174 (22%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +   + LI+E+  GG++ +L + +    +SE      I +    +  +H+   +H D+KP
Sbjct: 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKP 159

Query: 72  DNLLLDAR---GHIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS--- 114
            N+LL +    G IK+ DFG+   +  +      R++               P   +   
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDM 216

Query: 115 -------------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                          PF  E+ QETY  +   +  + +  E    +S+ A + I
Sbjct: 217 WNIGIIAYMLLTHTSPFVGEDNQETYLNIS--QVNVDYSEETFSSVSQLATDFI 268

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +GTP+Y+APE+        A D W++G+I Y +L
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL 227

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 75.1 bits (185), Expect = 1e-15
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 23/104 (22%)

Query: 17  NLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           ++ +  E+  GG +   + +         E   +  + +    +  IH +  +H DIKP 
Sbjct: 85  HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPS 144

Query: 73  NLLLDARGHI-------------------KLSDFGLCTGLKKSH 97
           N+ +                         K+ D G  T +    
Sbjct: 145 NIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 188

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 279 AYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEM 315
                G   ++A EV  +   + P AD ++L + +   
Sbjct: 187 PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCA 224

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           S+  + YLI + + GG++   ++ ++  SE      I +   A+   H++G +HR++KP+
Sbjct: 80  SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPE 139

Query: 73  NLLLDARG---HIKLSDFGLCTGLKKSHR-------TDFY------RDLSQAKPSD-FS- 114
           NLLL ++     +KL+DFGL   ++   +       T  Y      R     KP D ++ 
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199

Query: 115 ----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                     YPPF  E+    Y+++ +       P    ++ EA++ I +
Sbjct: 200 GVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +   GTP Y++PEV  +  YG   D W+ GVI+Y +L
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++PEV  +  YG   D W+ GVI+Y +L
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILL 207

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 11  RMSDPINLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           R      L L+ E +   D+ T L  + +  +  E  +  + +    +D +H    +HRD
Sbjct: 87  RTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 145

Query: 69  IKPDNLLLDARGHIKLSDFGL 89
           +KP N+L+ + G IKL+DFGL
Sbjct: 146 LKPQNILVTSSGQIKLADFGL 166

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           Y APEV LQ+ Y    D WS+G I  EM 
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV LQ+ Y    D WS+G I  EM 
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 11  RMSDPINLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           R    I + L+ E +   D+ T L       L  E  +  + +    +D +H    +HRD
Sbjct: 87  RTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 145

Query: 69  IKPDNLLLDARGHIKLSDFGL 89
           +KP+N+L+ + G +KL+DFGL
Sbjct: 146 LKPENILVTSGGTVKLADFGL 166

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           Y APEV LQ+ Y    D WS+G I  EM 
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV LQ+ Y    D WS+G I  EM 
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMF 213

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L+L+ E+     ++  L   +  + E   +    +T  A++  HK   IHRD+KP+N+L
Sbjct: 76  RLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENIL 134

Query: 76  LDARGHIKLSDFGL 89
           +     IKL DFG 
Sbjct: 135 ITKHSVIKLCDFGF 148

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y +PE+ +  T YGP  D W++G +  E+L
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELL 197

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 73.9 bits (182), Expect = 6e-15
 Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 32/172 (18%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            P  + L++E + GG++   +++K   SE      + +   A+  +H+ G +HRD+KP+N
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPEN 178

Query: 74  LLLDARG---HIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDF----- 113
           LL         +K++DFGL   ++          T  Y      R  +     D      
Sbjct: 179 LLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGI 238

Query: 114 -------SYPPFCSE-NPQETYRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                   + PF  E   Q  +R+++       F       +S  A++ + +
Sbjct: 239 ITYILLCGFEPFYDERGDQFMFRRIL--NCEYYFISPWWDEVSLNAKDLVRK 288

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +  GTP Y APE+     YGP  D WS+G+I Y +L
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE+     YGP  D WS+G+I Y +L
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILL 244

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 73.4 bits (181), Expect = 6e-15
 Identities = 38/174 (21%), Positives = 60/174 (34%), Gaps = 37/174 (21%)

Query: 14  DPINLYLIMEFLPGGDMM-TLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
               L +I EF+ G D+   +      L+E     Y+ +   A+  +H     H DI+P+
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPE 131

Query: 73  NLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYRDLS-----------QAKPSDFS----- 114
           N++   R    IK+ +FG    LK       +R L            Q      +     
Sbjct: 132 NIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWS 188

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                        PF +E  Q+    +M       F  E    IS EA + + R
Sbjct: 189 LGTLVYVLLSGINPFLAETNQQIIENIM--NAEYTFDEEAFKEISIEAMDFVDR 240

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
               P+Y APEV        A D WSLG ++Y +L
Sbjct: 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APEV        A D WSLG ++Y +L
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLL 197

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
            L ++ ++  G  +   L   +T  E      IA +TA  +D +H    IHRD+K +N+ 
Sbjct: 93  QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152

Query: 76  LDARGHIKLSDFGL 89
           L     +K+ DFGL
Sbjct: 153 LHEDNTVKIGDFGL 166

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 281 STVGTPDYIAPEVFLQTGYGP---AADWWSLGVIMYEML 316
              G+  ++APEV       P    +D ++ G+++YE++
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSE--ECTQFYIA-ETALAIDSIHK 61
           A  +      P NL ++ E+L  G +  LL K     +  E  +  +A + A  ++ +H 
Sbjct: 102 AVTQ------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155

Query: 62  LG--FIHRDIKPDNLLLDARGHIKLSDFGL 89
                +HR++K  NLL+D +  +K+ DFGL
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  GTP+++APEV         +D +S GVI++E+ 
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
             YL+ EF+    ++  L +  + L  +  Q Y+ +    I   H    IHRDIKP+N+L
Sbjct: 98  RWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENIL 156

Query: 76  LDARGHIKLSDFGL 89
           +   G +KL DFG 
Sbjct: 157 VSQSGVVKLCDFGF 170

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 71.8 bits (177), Expect = 2e-14
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 17  NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            LYL+ EFL   D+   +       +     + Y+ +    +   H    +HRD+KP NL
Sbjct: 76  KLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNL 134

Query: 75  LLDARGHIKLSDFGL 89
           L++  G IKL+DFGL
Sbjct: 135 LINTEGAIKLADFGL 149

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 72.6 bits (178), Expect = 2e-14
 Identities = 37/215 (17%), Positives = 60/215 (27%), Gaps = 73/215 (33%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD----------------------------------- 38
           D   + L+ME   GG ++  L                                       
Sbjct: 99  DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFR 158

Query: 39  -----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG--HIKLSDFGLCT 91
                   E+     + +   A+  +H  G  HRDIKP+N L        IKL DFGL  
Sbjct: 159 ESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK 218

Query: 92  GLKKSHRTDFYRD---------------LSQAKPSDFS----------------YPPFCS 120
              K +  ++Y                  +  +                       PF  
Sbjct: 219 EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG 278

Query: 121 ENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
            N  +T  +V++ +     P    +S  AR+ +  
Sbjct: 279 VNDADTISQVLNKKLCFENPNYNVLSPLARDLLSN 313

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 266 RRAESWKKNRRALAYSTVGTPDYIAPEV--FLQTGYGPAADWWSLGVIMYEML 316
           +              +  GTP ++APEV       YGP  D WS GV+++ +L
Sbjct: 218 KEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 37/177 (20%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
           S    LY++ EF+ G D+   ++K+       SE     Y+ +   A+   H    IHRD
Sbjct: 96  SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155

Query: 69  IKPDNLLLDARGH---IKLSDFGLCTGLKKSHR-------TDFY------RDLSQAKPSD 112
           +KP  +LL ++ +   +KL  FG+   L +S         T  +      +     KP D
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVD 215

Query: 113 F-S-----------YPPFCSENPQETYRKVMSWRDTLVFPPEV--PISEEARETIVR 155
                           PF     +  +  ++  +      P     ISE A++ + R
Sbjct: 216 VWGCGVILFILLSGCLPFYGTK-ERLFEGII--KGKYKMNPRQWSHISESAKDLVRR 269

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
              VGTP ++APEV  +  YG   D W  GVI++ +L
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  +  YG   D W  GVI++ +L
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILL 227

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 71.2 bits (175), Expect = 3e-14
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH--KLGFIHRDIKPDNL 74
            + L+ E +  G + T L +   +  +  + +  +    +  +H      IHRD+K DN+
Sbjct: 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI 162

Query: 75  LLDAR-GHIKLSDFGLCTGLKKSHRTDF 101
            +    G +K+ D GL T  + S     
Sbjct: 163 FITGPTGSVKIGDLGLATLKRASFAKAV 190

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
              R + A + +GTP+++APE++ +  Y  + D ++ G+ M EM 
Sbjct: 180 TLKRASFAKAVIGTPEFMAPEMY-EEKYDESVDVYAFGMCMLEMA 223

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 71.0 bits (175), Expect = 4e-14
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L L+ E L   D+  LL + +  L     + ++ +    I   H    +HRD+KP NLL
Sbjct: 74  RLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132

Query: 76  LDARGHIKLSDFGL 89
           ++  G +K++DFGL
Sbjct: 133 INREGELKIADFGL 146

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 39.8 bits (94), Expect = 7e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y AP+V +    Y    D WS+G I  EM+
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLL 75
           ++++ ME +           +  + E            A+  +  K G IHRD+KP N+L
Sbjct: 98  DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL 157

Query: 76  LDARGHIKLSDFGLCTGLKKS 96
           LD RG IKL DFG+   L   
Sbjct: 158 LDERGQIKLCDFGISGRLVDD 178

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 5/40 (12%)

Query: 281 STVGTPDYIAPEVF-----LQTGYGPAADWWSLGVIMYEM 315
            + G   Y+APE        +  Y   AD WSLG+ + E+
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 70.7 bits (174), Expect = 5e-14
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L L+ EF+   D+  +L   K  L +   + Y+ +    +   H+   +HRD+KP NLL
Sbjct: 93  CLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151

Query: 76  LDARGHIKLSDFGL 89
           +++ G +KL+DFGL
Sbjct: 152 INSDGALKLADFGL 165

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y AP+V +    Y  + D WS+G I  EM+
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 70.8 bits (174), Expect = 6e-14
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLG 63
           AC+       P +L +I     G  + +++     + +      IA E    +  +H  G
Sbjct: 97  ACMS------PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFGL 89
            +H+D+K  N+  D  G + ++DFGL
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGL 175

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 70.2 bits (173), Expect = 6e-14
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L L+ EF    D+          L  E  + ++ +    +   H    +HRD+KP NLL
Sbjct: 75  KLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133

Query: 76  LDARGHIKLSDFGL 89
           ++  G +KL++FGL
Sbjct: 134 INRNGELKLANFGL 147

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y  P+V      Y  + D WS G I  E+ 
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 71.0 bits (174), Expect = 7e-14
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLL 75
            + + ME + GG +  +L K   + E+            +  +  K   +HRD+KP N+L
Sbjct: 105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 164

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDF 101
           +++RG IKL DFG+   L  S    F
Sbjct: 165 VNSRGEIKLCDFGVSGQLIDSMANSF 190

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           +A S VGT  Y++PE    T Y   +D WS+G+ + EM
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 69.9 bits (172), Expect = 9e-14
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 17  NLYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
            L L+ EF+   D+   +           L     +++  +    +   H+   +HRD+K
Sbjct: 77  KLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLK 135

Query: 71  PDNLLLDARGHIKLSDFGL 89
           P NLL++ RG +KL DFGL
Sbjct: 136 PQNLLINKRGQLKLGDFGL 154

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y AP+V +    Y  + D WS G I+ EM+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMI 203

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 318 APEVFL-QTGYGPAADWWSLGVIMYEML 344
           AP+V +    Y  + D WS G I+ EM+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMI 203

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +L L+ E+L   D+   L    + ++    + ++ +    +   H+   +HRD+KP NLL
Sbjct: 74  SLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLL 132

Query: 76  LDARGHIKLSDFGL 89
           ++ RG +KL+DFGL
Sbjct: 133 INERGELKLADFGL 146

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y  P++ L  T Y    D W +G I YEM 
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMA 195

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           N+ L+ +F+   D+  ++      L+    + Y+  T   ++ +H+   +HRD+KP+NLL
Sbjct: 86  NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLL 144

Query: 76  LDARGHIKLSDFGL 89
           LD  G +KL+DFGL
Sbjct: 145 LDENGVLKLADFGL 158

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +    YL+ E + GG +++ + K+   +E      + + A A+D +H  G  HRD+KP+N
Sbjct: 82  EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN 141

Query: 74  LLLDARGH---IKLSDFGLCTGLK 94
           +L +       +K+ DF L +G+K
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIK 165

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 280 YSTVGTPDYIAPEVF-----LQTGYGPAADWWSLGVIMYEML 316
            +  G+ +Y+APEV        + Y    D WSLGVI+Y +L
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 17  NLYLIMEFLPGG---DMMTLLMKKDTLSEECTQFYIAETAL-AIDSIH-KLGFIHRDIKP 71
           ++++ ME +          ++ K  T+ E+     IA + + A++ +H KL  IHRD+KP
Sbjct: 80  DVWICMELMDTSLDKFYKQVIDKGQTIPEDILG-KIAVSIVKALEHLHSKLSVIHRDVKP 138

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKS 96
            N+L++A G +K+ DFG+   L   
Sbjct: 139 SNVLINALGQVKMCDFGISGYLVDD 163

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 278 LAYST-VGTPDYIAPEVFL----QTGYGPAADWWSLGVIMYEM 315
           +A     G   Y+APE       Q GY   +D WSLG+ M E+
Sbjct: 164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-TALAIDSIHKLGFIHRDIKP 71
                L  I E++ GG +  ++   D+      +   A+  A  +  +H +  IHRD+  
Sbjct: 77  YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136

Query: 72  DNLLLDARGHIKLSDFGL 89
            N L+    ++ ++DFGL
Sbjct: 137 HNCLVRENKNVVVADFGL 154

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 263 DSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                  S KK  R   Y+ VG P ++APE+     Y    D +S G+++ E++
Sbjct: 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 12/80 (15%)

Query: 18  LYLIMEFLPGGDMMTL--LMK-----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           L L++E++P     T+    +     K T+     + Y+ +   ++  IH +G  HRDIK
Sbjct: 113 LNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIK 168

Query: 71  PDNLLLDAR-GHIKLSDFGL 89
           P NLLLD   G +KL DFG 
Sbjct: 169 PQNLLLDPPSGVLKLIDFGS 188

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 69.9 bits (171), Expect = 3e-13
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
           Y++ME++ G  +         L       Y+ E   A+  +H +G ++ D+KP+N++L  
Sbjct: 160 YIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT- 216

Query: 79  RGHIKLSDFGL 89
              +KL D G 
Sbjct: 217 EEQLKLIDLGA 227

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            GTP + APE+ ++TG   A D +++G  +  + 
Sbjct: 238 YGTPGFQAPEI-VRTGPTVATDIYTVGRTLAALT 270

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 36/174 (20%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +Y++ E + GG+++  ++++   SE      +      ++ +H  G +HRD+KP N
Sbjct: 87  DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSN 146

Query: 74  LLL----DARGHIKLSDFGLCTGLKKSHR-------TDFY------RDLSQAKPSDF-S- 114
           +L          I++ DFG    L+  +        T  +               D  S 
Sbjct: 147 ILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSL 206

Query: 115 ----------YPPF---CSENPQETYRKVMSWRDTLVFPPEV--PISEEARETI 153
                     Y PF     + P+E   ++                +S+ A++ +
Sbjct: 207 GVLLYTMLTGYTPFANGPDDTPEEILARIG--SGKFSLSGGYWNSVSDTAKDLV 258

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 67.3 bits (165), Expect = 9e-13
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             T +++APEV  + GY  A D WSLGV++Y ML
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  + GY  A D WSLGV++Y ML
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTML 214

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D ++ +L+ME L GG++   + KK   SE    + + +   A+  +H +G +HRD+KP+N
Sbjct: 77  DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136

Query: 74  LLL---DARGHIKLSDFGL 89
           LL    +    IK+ DFG 
Sbjct: 137 LLFTDENDNLEIKIIDFGF 155

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 67.7 bits (166), Expect = 7e-13
 Identities = 18/34 (52%), Positives = 21/34 (61%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             T  Y APE+  Q GY  + D WSLGVI+Y ML
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTML 203

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE+  Q GY  + D WSLGVI+Y ML
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTML 203

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 68.7 bits (168), Expect = 5e-13
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 1/110 (0%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY+++E     D   L      L+E   +  +    + +  +H  G +HRD+KP N L++
Sbjct: 132 LYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETY 127
               +K+ DFGL   +      +    +S  +          ++N +   
Sbjct: 191 QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 12/80 (15%)

Query: 18  LYLIMEFLPGGDMMTL--LMK-----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           L L+++++P     T+  + +     K TL     + Y+ +   ++  IH  G  HRDIK
Sbjct: 128 LNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183

Query: 71  PDNLLLDAR-GHIKLSDFGL 89
           P NLLLD     +KL DFG 
Sbjct: 184 PQNLLLDPDTAVLKLCDFGS 203

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 40/181 (22%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
            D    Y+ +E L    +   + +KD           + +T   +  +H L  +HRD+KP
Sbjct: 88  KDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKP 146

Query: 72  DNLLLDARGH-----IKLSDFGLCTGLKKSHR----------TDFYR---------DLSQ 107
            N+L+            +SDFGLC  L               T+ +            + 
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP 206

Query: 108 AKPSD-FS------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIV 154
               D FS              PF     ++    + +     + P +      ARE I 
Sbjct: 207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH-EDVIARELIE 265

Query: 155 R 155
           +
Sbjct: 266 K 266

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 56.3 bits (136), Expect = 5e-09
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 280 YSTVGTPDYIAPEVFLQT---GYGPAADWWSLGVIMYEML 316
               GT  +IAPE+  +          D +S G + Y ++
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 67.7 bits (166), Expect = 6e-13
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
              L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++
Sbjct: 107 TPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163

Query: 77  D-ARGHIKLSDFGL 89
           D     ++L D+GL
Sbjct: 164 DHEHRKLRLIDWGL 177

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 67.4 bits (165), Expect = 6e-13
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSE--ECTQFYIA-ETALAIDSIHKL---GFIHRDIK 70
            + L+ME+  GG +  +L   + L             + +  +  +H +     IHRD+K
Sbjct: 73  PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132

Query: 71  PDNLLLDARG-HIKLSDFGL 89
           P NLLL A G  +K+ DFG 
Sbjct: 133 PPNLLLVAGGTVLKICDFGT 152

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 49.3 bits (118), Expect = 7e-07
 Identities = 12/36 (33%), Positives = 23/36 (63%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  G+  ++APEVF  + Y    D +S G+I++E++
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 67.6 bits (166), Expect = 8e-13
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 17  NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           ++YL+ +F    D+  LL       +    +  +      +  IH+   +HRD+K  N+L
Sbjct: 98  SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156

Query: 76  LDARGHIKLSDFGL 89
           +   G +KL+DFGL
Sbjct: 157 ITRDGVLKLADFGL 170

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            L+LI E+    D+   + K   +S    + ++ +    ++  H    +HRD+KP NLLL
Sbjct: 107 RLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165

Query: 77  DA-----RGHIKLSDFGL 89
                     +K+ DFGL
Sbjct: 166 SVSDASETPVLKIGDFGL 183

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           Y  PE+ L    Y  + D WS+  I  EML
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEML 232

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 21/104 (20%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL-------AIDSIHKLGFIH 66
               LY+ +E L   ++  L+  K+   E                    +  +H L  IH
Sbjct: 80  TDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIH 138

Query: 67  RDIKPDNLLLDARGH-------------IKLSDFGLCTGLKKSH 97
           RD+KP N+L+                  I +SDFGLC  L    
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.9 bits (127), Expect = 6e-08
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 283 VGTPDYIAPEVFLQT-------GYGPAADWWSLGVIMYEML 316
            GT  + APE+  ++           + D +S+G + Y +L
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +   TP Y+APEV     Y  + D WSLGVIMY +L
Sbjct: 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 223

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 62.4 bits (152), Expect = 5e-11
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 33/181 (18%)

Query: 17  NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L +IME + GG++ + + ++     +E      + +   AI  +H     HRD+KP+NL
Sbjct: 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 159

Query: 75  LLDARGH---IKLSDFGLCTGLKKSHRTD-----FY------RDLSQAKPSDF-S----- 114
           L  ++     +KL+DFG      ++         +Y            K  D  S     
Sbjct: 160 LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219

Query: 115 ------YPPFCSENPQET----YRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRR 163
                 +PPF S   Q       R++   +     P    +SE+A++ I     ++   R
Sbjct: 220 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279

Query: 164 L 164
           L
Sbjct: 280 L 280

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     Y  + D WSLGVIMY +L
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILL 223

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 4/85 (4%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
             ++ E++ GG +  +     + S       +   A A D+ H+ G       P  + + 
Sbjct: 106 GLVVAEWIRGGSLQEVA--DTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS 163

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFY 102
             G + L+     T    + + D  
Sbjct: 164 IDGDVVLAYPA--TMPDANPQDDIR 186

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 18  LYLIMEFLPGGD----MMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           L +IME++P       + + +    ++       YI +   A+  IH LG  HRDIKP N
Sbjct: 113 LNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQN 171

Query: 74  LLLDAR-GHIKLSDFGL 89
           LL++++   +KL DFG 
Sbjct: 172 LLVNSKDNTLKLCDFGS 188

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA----ETALAIDSIH-KLGFIHRDIKP 71
           + ++ ME +              L +   +  +      T  A++ +   L  IHRDIKP
Sbjct: 95  DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKP 154

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKS 96
            N+LLD  G+IKL DFG+   L  S
Sbjct: 155 SNILLDRSGNIKLCDFGISGQLVDS 179

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 282 TVGTPDYIAPEVF----LQTGYGPAADWWSLGVIMYEM 315
             G   Y+APE       + GY   +D WSLG+ +YE+
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 65.9 bits (161), Expect = 3e-12
 Identities = 18/34 (52%), Positives = 21/34 (61%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             TP Y+APEV     Y  + D WSLGVIMY +L
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 33/170 (19%)

Query: 17  NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NL
Sbjct: 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 192

Query: 75  LLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDF-S---- 114
           L  ++     +KL+DFG        +       T +Y            K  D  S    
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 252

Query: 115 -------YPPFCSENPQET----YRKVMSWRDTLVFPPEVPISEEARETI 153
                  YPPF S +          ++   +     P    +SEE +  I
Sbjct: 253 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 302

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV     Y  + D WSLGVIMY +L
Sbjct: 230 VAPEVLGPEKYDKSCDMWSLGVIMYILL 257

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 16/93 (17%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLG 63
                          ++MEF+P GD+   L+ K    +   +  +  + AL I+ +    
Sbjct: 91  LMHNPP--------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142

Query: 64  --FIHRDIKPDNLLLDARG-----HIKLSDFGL 89
              +HRD++  N+ L +         K++DFGL
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 281 STVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEML 316
             +G   ++APE        Y   AD +S  +I+Y +L
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 18/106 (16%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG- 63
            CLK        NL L+MEF  GG +  +L  K  +  +    +  + A  ++ +H    
Sbjct: 74  VCLK------EPNLCLVMEFARGGPLNRVLSGKR-IPPDILVNWAVQIARGMNYLHDEAI 126

Query: 64  --FIHRDIKPDNLLLDARGH--------IKLSDFGLCTGLKKSHRT 99
              IHRD+K  N+L+  +          +K++DFGL     ++ + 
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 45.7 bits (109), Expect = 8e-06
 Identities = 13/36 (36%), Positives = 22/36 (61%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  G   ++APEV   + +   +D WS GV+++E+L
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 8/89 (8%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLS-EECTQFYIA-ETALAIDSIHKL 62
           AC          +  LI  ++P G +  +L +      ++      A + A  +  +H L
Sbjct: 75  ACQSPP----APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130

Query: 63  GF--IHRDIKPDNLLLDARGHIKLSDFGL 89
                   +   ++++D     ++S   +
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADV 159

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 281 STVGTPDYIAPEVFLQTGYGP---AADWWSLGVIMYEML 316
             +  P ++APE   +        +AD WS  V+++E++
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 11/93 (11%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH---- 60
           + +          L+LI  +   G +   L +  TL        +   A  +  +H    
Sbjct: 70  SDMTS--RHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126

Query: 61  ----KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
               K    HRD+K  N+L+   G   ++D GL
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 8/75 (10%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            YL+M F     M T L   MK + L E+  QF + +    +  IH  G IHRD+KP NL
Sbjct: 105 FYLVMPF-----MGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL 159

Query: 75  LLDARGHIKLSDFGL 89
            ++    +K+ DFGL
Sbjct: 160 AVNEDCELKILDFGL 174

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 1   MKDYACLKQLRMSDPINLYLIMEFLPGGD----MMTLLMKKDTLSEECTQFYIAETALAI 56
           ++ Y      R    I L ++ME++P             ++        + ++ +   +I
Sbjct: 84  LQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142

Query: 57  DSIHK--LGFIHRDIKPDNLLLD-ARGHIKLSDFGL 89
             +H   +   HRDIKP N+L++ A G +KL DFG 
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGS 178

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 36/166 (21%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
            +    L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+
Sbjct: 84  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143

Query: 70  KPDNLLLDARGH---IKLSDFGLCTG-LKKSHRTDFYRDLSQAKPSDF-S---------- 114
           KP+NLL  ++     +KL+DFG       + +           K  D  S          
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTGEKY----------DKSCDMWSLGVIMYILLC 193

Query: 115 -YPPFCSENPQET----YRKVMSWRDTLVFPPEV--PISEEARETI 153
            YPPF S +          ++        FP      +SEE +  I
Sbjct: 194 GYPPFYSNHGLAISPGMKTRIR--MGQYEFPNPEWSEVSEEVKMLI 237

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 48.8 bits (117), Expect = 9e-07
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 289 IAPEVFLQTGYGPAADWWSLGVIMYEML 316
            A E      Y  + D WSLGVIMY +L
Sbjct: 166 FAKET-TGEKYDKSCDMWSLGVIMYILL 192

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 48.8 bits (117), Expect = 9e-07
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            A E      Y  + D WSLGVIMY +L
Sbjct: 166 FAKET-TGEKYDKSCDMWSLGVIMYILL 192

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 62.5 bits (152), Expect = 5e-11
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 1/100 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           LY+++E     D+  L      L+EE  +  +    L  + IH+ G IHRD+KP N LL+
Sbjct: 105 LYIVLEIA-DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPP 117
               +K+ DFGL   +     T+   DL + +        
Sbjct: 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 62.1 bits (151), Expect = 5e-11
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 11/93 (11%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH---- 60
           A +K         LYLI ++   G +   L K  TL  +        +   +  +H    
Sbjct: 99  ADIK--GTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155

Query: 61  ----KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
               K    HRD+K  N+L+   G   ++D GL
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 61.8 bits (150), Expect = 6e-11
 Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 11/94 (11%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH---- 60
              +           L+ME+ P G +   L    T     +          +  +H    
Sbjct: 75  GDERVTADGRM-EYLLVMEYYPNGSLXKYL-SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132

Query: 61  -----KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
                K    HRD+   N+L+   G   +SDFGL
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 62.0 bits (151), Expect = 7e-11
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +YL+ ++     M T L   ++ + L     Q+ + +    I  +H  G +HRD+KP N+
Sbjct: 86  VYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNI 140

Query: 75  LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSD 112
           LL+A  H+K++DFGL        R      LS  + ++
Sbjct: 141 LLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 61.6 bits (150), Expect = 9e-11
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 8/75 (10%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +YL+        M   L   +K   L+++  QF I +    +  IH    IHRD+KP NL
Sbjct: 109 VYLVTHL-----MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163

Query: 75  LLDARGHIKLSDFGL 89
            ++    +K+ DFGL
Sbjct: 164 AVNEDCELKILDFGL 178

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 61.3 bits (149), Expect = 9e-11
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 11/112 (9%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH---- 60
           A  K         L+L+ ++   G +   L  + T++ E        TA  +  +H    
Sbjct: 104 ADNKD--NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 160

Query: 61  ----KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQA 108
               K    HRD+K  N+L+   G   ++D GL      +  T       + 
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 61.6 bits (150), Expect = 9e-11
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 18  LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           LYL+ E +   D+  ++  ++  +S +  Q+++    L +  +H+ G +HRD+ P N+LL
Sbjct: 109 LYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167

Query: 77  DARGHIKLSDFGL 89
                I + DF L
Sbjct: 168 ADNNDITICDFNL 180

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +Y+I E      M T L   +    LS++  Q++I +T  A+  +H    IHRD+KP NL
Sbjct: 89  VYIIQEL-----MQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNL 143

Query: 75  LLDARGHIKLSDFGL 89
           L+++   +K+ DFGL
Sbjct: 144 LINSNCDLKVCDFGL 158

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 18  LYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           +YL+ME      M   L +  +  L  E   + + +    I  +H  G IHRD+KP N++
Sbjct: 142 VYLVMEL-----MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196

Query: 76  LDARGHIKLSDFGLCTGLKKSHR------TDFYR 103
           + +   +K+ DFGL      S        T +YR
Sbjct: 197 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 18/34 (52%), Positives = 20/34 (58%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           V T  Y APEV L  GY    D WS+G IM EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV L  GY    D WS+G IM EM+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            YL+M F+   D+  ++      SEE  Q+ + +    +  IH  G +HRD+KP NL ++
Sbjct: 104 FYLVMPFM-QTDLQKIM--GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160

Query: 78  ARGHIKLSDFGL 89
               +K+ DFGL
Sbjct: 161 EDCELKILDFGL 172

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 9/76 (11%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +Y++ E+     M T L   +++  L EE  + ++ +    +  IH    +HRD+KP NL
Sbjct: 97  VYIVQEY-----METDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANL 151

Query: 75  LLDARG-HIKLSDFGL 89
            ++     +K+ DFGL
Sbjct: 152 FINTEDLVLKIGDFGL 167

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 15/96 (15%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-----------ETA 53
           A  +    S  ++L+LI  F   G +   L K + +S      +IA           E  
Sbjct: 86  AEKR--GTSVDVDLWLITAFHEKGSLSDFL-KANVVSWN-ELCHIAETMARGLAYLHEDI 141

Query: 54  LAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             +   HK    HRDIK  N+LL       ++DFGL
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 18  LYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
           +Y++ +      M T L   +K   LS +   +++ +    +  IH    +HRD+KP NL
Sbjct: 105 VYIVQDL-----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159

Query: 75  LLDARGHIKLSDFGL 89
           LL+    +K+ DFGL
Sbjct: 160 LLNTTCDLKICDFGL 174

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 19  YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLLLD 77
           +++ME L G D+  +  +  T  +      +    L  ++ IH+  ++H DIK  NLLL 
Sbjct: 128 FMVMERL-GIDLQKISGQNGTFKKSTV-LQLGIRMLDVLEYIHENEYVHGDIKAANLLLG 185

Query: 78  AR--GHIKLSDFGL 89
            +    + L+D+GL
Sbjct: 186 YKNPDQVYLADYGL 199

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           +Y++ME +   ++  ++  +  L  E   + + +    I  +H  G IHRD+KP N+++ 
Sbjct: 105 VYIVMELM-DANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161

Query: 78  ARGHIKLSDFGL 89
           +   +K+ DFGL
Sbjct: 162 SDCTLKILDFGL 173

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 18/34 (52%), Positives = 20/34 (58%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           V T  Y APEV L  GY    D WS+G IM EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APEV L  GY    D WS+G IM EM+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMI 220

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLLL 76
           +Y++ME + GGD +T L  +       T   +  + A  ++ +     IHRD+   N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246

Query: 77  DARGHIKLSDFGL 89
             +  +K+SDFG+
Sbjct: 247 TEKNVLKISDFGM 259

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 19  YLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLL 75
           +L++  L G  + + L    K  LSE      +A   L A++ +H+  ++H ++  +N+ 
Sbjct: 134 FLVLPSL-GRSLQSALDVSPKHVLSERSV-LQVACRLLDALEFLHENEYVHGNVTAENIF 191

Query: 76  LDA--RGHIKLSDFGL 89
           +D   +  + L+ +G 
Sbjct: 192 VDPEDQSQVTLAGYGF 207

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           ++     L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   
Sbjct: 89  AESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 146

Query: 73  NLLLDARGHIKLSDFGL 89
           N+LL  + + K+SDFGL
Sbjct: 147 NVLLVTQHYAKISDFGL 163

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 19  YLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETAL-AIDSIHKLGFIHRDIKPDNLLL 76
           ++IM+   G D+  +        S +     ++   L  ++ IH+  ++H DIK  NLLL
Sbjct: 128 FMIMDRF-GSDLQKIYEANAKRFSRKTV-LQLSLRILDILEYIHEHEYVHGDIKASNLLL 185

Query: 77  DAR--GHIKLSDFGL 89
           + +    + L D+GL
Sbjct: 186 NYKNPDQVYLVDYGL 200

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 17/86 (19%), Positives = 39/86 (45%), Gaps = 14/86 (16%)

Query: 17  NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQF-------YIAETALAIDSIHKLGFIHR 67
            ++L+ ++    D+  ++   +    +++  Q         + +    I  +H    +HR
Sbjct: 94  KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHR 152

Query: 68  DIKPDNLLLDA----RGHIKLSDFGL 89
           D+KP N+L+      RG +K++D G 
Sbjct: 153 DLKPANILVMGEGPERGRVKIADMGF 178

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
           L L+ME++P G +   L +      +   F   +    +  +H   +IHRD+   N+LLD
Sbjct: 110 LQLVMEYVPLGSLRDYLPRHSIGLAQLLLF-AQQICEGMAYLHAQHYIHRDLAARNVLLD 168

Query: 78  ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
               +K+ DFGL   + + H  ++YR      
Sbjct: 169 NDRLVKIGDFGLAKAVPEGH--EYYRVREDGD 198

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 51.8 bits (123), Expect = 1e-07
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 2/89 (2%)

Query: 2   KDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
              +   +        L++++EF  GG  +   M+    S    +  + +   ++     
Sbjct: 121 TKGSANDRPDFFKDDQLFIVLEFEFGGIDL-EQMRTKLSSLATAKSILHQLTASLAVAEA 179

Query: 62  -LGFIHRDIKPDNLLLDARGHIKLSDFGL 89
            L F HRD+   N+LL      KL     
Sbjct: 180 SLRFEHRDLHWGNVLLKKTSLKKLHYTLN 208

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
            ++ +   L+ME   GG +   L+  ++ +        + + ++ +  + +  F+HRD+ 
Sbjct: 80  QAEAL--MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA 137

Query: 71  PDNLLLDARGHIKLSDFGL 89
             N+LL  R + K+SDFGL
Sbjct: 138 ARNVLLVNRHYAKISDFGL 156

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L+
Sbjct: 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 178

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +    +K+ DFGL   L +    ++Y+     +
Sbjct: 179 ENENRVKIGDFGLTKVLPQDK--EYYKVKEPGE 209

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L LIME+LP G +   L K K+ +       Y ++    ++ +    +IHRD+   N+L+
Sbjct: 88  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYR 103
           +    +K+ DFGL   L +    +F++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDK--EFFK 172

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 9/78 (11%)

Query: 19  YLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLLL 76
            +++E L G  +  L    D T S +     IA   ++ ++ +H    I+RD+KP+N L+
Sbjct: 81  AMVLELL-GPSLEDLFDLCDRTFSLKTV-LMIAIQLISRMEYVHSKNLIYRDVKPENFLI 138

Query: 77  DARGH-----IKLSDFGL 89
              G+     I + DF L
Sbjct: 139 GRPGNKTQQVIHIIDFAL 156

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 13/84 (15%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFI 65
           ++  +   LI + +P G ++  + +         L   C Q  IA+    ++ +     +
Sbjct: 87  LTSTV--QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--IAK---GMNYLEDRRLV 139

Query: 66  HRDIKPDNLLLDARGHIKLSDFGL 89
           HRD+   N+L+    H+K++DFGL
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGL 163

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 3/93 (3%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             P+   +I E++  G +   L +     S       +   A  +  +  + ++HRD+  
Sbjct: 118 YKPM--MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA 175

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
            N+L+++    K+SDFGL   L+      +   
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS 208

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
                  ++ E++  G + T L       +       +      +  +  LG++HRD+  
Sbjct: 122 GRLA--MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAA 179

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
            N+L+D+    K+SDFGL   L+     D     +  K
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDD--PDAAYTTTGGK 215

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMT-LLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524

Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 525 SSNDCVKLGDFGL 537

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 50.7 bits (121), Expect = 4e-07
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 18  LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           L L+ME   GG +   L+ K        ++E   Q  ++     +  + +  F+HR++  
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ--VSM---GMKYLEEKNFVHRNLAA 464

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+LL  R + K+SDFGL
Sbjct: 465 RNVLLVNRHYAKISDFGL 482

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDS 58
             L+           +I+ F+  GD+   L           L  +    ++ + A  ++ 
Sbjct: 93  VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY 152

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +    FIHRD+   N +L     + ++DFGL    +K +  D+YR    +K
Sbjct: 153 LSSRNFIHRDLAARNCMLAEDMTVCVADFGLS---RKIYSGDYYRQGCASK 200

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 49.5 bits (119), Expect = 5e-07
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMT-LLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +++IME    G++ + L ++K +L       Y  + + A+  +    F+HRDI   N+L+
Sbjct: 90  VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 149

Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 150 SSNDCVKLGDFGL 162

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 13/84 (15%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFI 65
           ++ P+   ++ E  P G ++  L K        TLS    Q  +AE    +  +    FI
Sbjct: 91  LTPPM--KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE---GMGYLESKRFI 143

Query: 66  HRDIKPDNLLLDARGHIKLSDFGL 89
           HRD+   NLLL  R  +K+ DFGL
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGL 167

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + LIMEFLP G +   L K K+ ++ +    Y  +    +D +    ++HRD+   N+L+
Sbjct: 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159

Query: 77  DARGHIKLSDFGL 89
           ++   +K+ DFGL
Sbjct: 160 ESEHQVKIGDFGL 172

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 19  YLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLLL 76
            L+++ L G  +  LL       S +      A+  LA + SIH+   ++RDIKPDN L+
Sbjct: 82  VLVIDLL-GPSLEDLLDLCGRKFSVKTV-AMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139

Query: 77  DARGH-----IKLSDFGLCT 91
                     I + DFG+  
Sbjct: 140 GRPNSKNANMIYVVDFGMVK 159

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           S P+   ++ E++  G + + L K D   +       +   A  +  +  +G++HRD+  
Sbjct: 118 SKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAA 175

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+L+++    K+SDFGL
Sbjct: 176 RNILINSNLVCKVSDFGL 193

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 3/93 (3%)

Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L L+ME+LP G +   L + +  L       Y ++    ++ +     +HRD+   N+L+
Sbjct: 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 160

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           ++  H+K++DFGL   L      D+Y      +
Sbjct: 161 ESEAHVKIADFGLAKLLPLDK--DYYVVREPGQ 191

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 49.1 bits (118), Expect = 8e-07
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
            ++IME  P G++   L + K++L       Y  +   A+  +  +  +HRDI   N+L+
Sbjct: 87  TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV 146

Query: 77  DARGHIKLSDFGL 89
            +   +KL DFGL
Sbjct: 147 ASPECVKLGDFGL 159

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.7 bits (117), Expect = 8e-07
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKP 71
             PI  Y++ E++  G ++  L       E      +  +    +  +    FIHRD+  
Sbjct: 75  EYPI--YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132

Query: 72  DNLLLDARGHIKLSDFGL 89
            N L+D    +K+SDFG+
Sbjct: 133 RNCLVDRDLCVKVSDFGM 150

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 17/106 (16%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK--------------LG 63
           + +I E+   GD++  L +K  + E    F IA +  +   +                  
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
            IHRD+   N+LL      K+ DFGL    +       Y     A+
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNAR 227

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.9 bits (117), Expect = 9e-07
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +++ T +Y +PEV L   +G  AD WS   +++E++
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 229

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           +PEV L   +G  AD WS   +++E++
Sbjct: 203 SPEVLLGAPWGCGADIWSTACLIFELI 229

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 11/75 (14%)

Query: 40  LSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLD------ARGHIKLSDFGLCTG 92
           +     +    +  L +D +H+  G IH DIKP+N+L++          IK++D G    
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187

Query: 93  LKKSHRTD----FYR 103
             + +        YR
Sbjct: 188 YDEHYTNSIQTREYR 202

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 48.9 bits (117), Expect = 9e-07
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMT-LLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           + LI + +P G ++  +   KD +  +    +  + A  ++ +     +HRD+   N+L+
Sbjct: 91  VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150

Query: 77  DARGHIKLSDFGL 89
               H+K++DFGL
Sbjct: 151 KTPQHVKITDFGL 163

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKP 71
             PI   L+ EF+  G +   L  +  L    T   +  +    +  + +   IHRD+  
Sbjct: 75  QAPI--CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 132

Query: 72  DNLLLDARGHIKLSDFGL 89
            N L+     IK+SDFG+
Sbjct: 133 RNCLVGENQVIKVSDFGM 150

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 19  YLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLLL 76
            ++ME L G  +  L        S +     +A+  ++ I+ IH   FIHRD+KPDN L+
Sbjct: 81  VMVMELL-GPSLEDLFNFCSRKFSLKTV-LLLADQMISRIEYIHSKNFIHRDVKPDNFLM 138

Query: 77  DARGH---IKLSDFGLC 90
                   + + DFGL 
Sbjct: 139 GLGKKGNLVYIIDFGLA 155

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 18  LYLIMEFLPGGDMMT-LLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           L L+ ++LP G ++  +   +  L  +    +  + A  +  + + G +HR++   N+LL
Sbjct: 89  LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL 148

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
            +   ++++DFG+          D     S+AK
Sbjct: 149 KSPSQVQVADFGVA---DLLPPDDKQLLYSEAK 178

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKP 71
           +PI  Y++ E++  G ++  L  +        Q     A+ A  +  + ++ ++HRD++ 
Sbjct: 251 EPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+L+      K++DFGL
Sbjct: 309 ANILVGENLVCKVADFGL 326

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKP 71
           +PI  Y++ E++  G ++  L  +        Q     A+ A  +  + ++ ++HRD++ 
Sbjct: 334 EPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+L+      K++DFGL
Sbjct: 392 ANILVGENLVCKVADFGL 409

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 19  YLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLLL 76
            L+M+ L G  +  L       LS +     +A+  +  ++ +H   F+HRDIKPDN L+
Sbjct: 79  VLVMDLL-GPSLEDLFNFCSRKLSLKTV-LMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136

Query: 77  DARGH---IKLSDFGLCT 91
                   + + DFGL  
Sbjct: 137 GLGRRANQVYIIDFGLAK 154

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 13  SDPINLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
             P   Y+I EF+  G+++  L    +  +S     +   + + A++ + K  FIHRD+ 
Sbjct: 81  EPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
             N L+     +K++DF    GL +    D Y   + AK
Sbjct: 139 ARNCLVGENHLVKVADF----GLSRLMTGDTYTAHAGAK 173

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 19/108 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------------- 62
           LY+I+E+   G++   L  +     E +          +     +               
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175

Query: 63  -GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
              IHRD+   N+L+     +K++DFGL    +  +  D+Y+  +  +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKTTNGR 220

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 19/108 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------------- 62
           LY+I+E+   G++   L  +     E +          +     +               
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221

Query: 63  -GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
              IHRD+   N+L+     +K++DFGL    +  +  D+Y+  +  +
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKTTNGR 266

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 60  HKLGFIHRDIKPDNLLLDARGHIKLSDFGLC---TGLKKSH 97
           H    IHRD+K  N+LLD     K++DFG+    T L ++H
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKP 71
             PI  ++I E++  G ++  L +     +      +  +   A++ +    F+HRD+  
Sbjct: 91  QRPI--FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 148

Query: 72  DNLLLDARGHIKLSDFGL 89
            N L++ +G +K+SDFGL
Sbjct: 149 RNCLVNDQGVVKVSDFGL 166

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 13  SDPINLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
             P   Y+I EF+  G+++  L    +  +S     +   + + A++ + K  FIHR++ 
Sbjct: 288 EPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA 345

Query: 71  PDNLLLDARGHIKLSDFGL 89
             N L+     +K++DFGL
Sbjct: 346 ARNCLVGENHLVKVADFGL 364

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 19/108 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------------- 62
           L +I+EF   G++ T L  K                  +   H +               
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166

Query: 63  -GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
              IHRD+   N+LL  +  +K+ DFGL    +  ++   Y     A+
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGDAR 211

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 46.8 bits (112), Expect = 4e-06
 Identities = 16/25 (64%), Positives = 18/25 (72%)

Query: 65  IHRDIKPDNLLLDARGHIKLSDFGL 89
           IHRDIK  N+LLD     K+SDFGL
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGL 179

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            LY++ E++  G ++  L  +    L  +C   +  +   A++ +    F+HRD+   N+
Sbjct: 89  GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV 148

Query: 75  LLDARGHIKLSDFGL 89
           L+      K+SDFGL
Sbjct: 149 LVSEDNVAKVSDFGL 163

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 19/105 (18%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-TALAID---------SIHKLGFIHR 67
            +++ME + GGD+ + L +      + +   + +   +A D           H   FIHR
Sbjct: 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHR 164

Query: 68  DIKPDNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           DI   N LL   G     K+ DFG+    +  +R  +YR    A 
Sbjct: 165 DIAARNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGGCAM 206

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 10/111 (9%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK------KDTLSEECTQFYIAETALAIDS 58
            C++      P    +I+ F+  GD+ T L+          +  +    ++ + AL ++ 
Sbjct: 104 VCIEMSSQGIP-KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162

Query: 59  IHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           +    F+HRD+   N +L     + ++DFGL    KK +  D+YR    AK
Sbjct: 163 LSNRNFLHRDLAARNCMLRDDMTVCVADFGLS---KKIYSGDYYRQGRIAK 210

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 26/115 (22%)

Query: 18  LYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKL-------------- 62
           +YLI E+   GD++  L  K +  SE+  ++   +     + ++ L              
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183

Query: 63  --------GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
                     +HRD+   N+L+     +K+ DFGL    +       Y     A+
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA---RDIMSDSNYVVRGNAR 235

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 19/105 (18%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-TALAID---------SIHKLGFIHR 67
            ++++E + GGD+ + L +      + +   + +   +A D           H   FIHR
Sbjct: 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHR 205

Query: 68  DIKPDNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           DI   N LL   G     K+ DFG+    +  +R  +YR    A 
Sbjct: 206 DIAARNCLLTCPGPGRVAKIGDFGMA---RDIYRAGYYRKGGCAM 247

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 21/110 (19%)

Query: 18  LYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKL-------------- 62
             +I E+   GD++  L +K D+     T   I E       +  L              
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 161

Query: 63  ---GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
                IHRD+   N+LL      K+ DFGL    +       Y     A+
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGLA---RDIKNDSNYVVKGNAR 208

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 19/108 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------------- 62
           LY+I+E+   G++   L  +     E +          + S   +               
Sbjct: 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209

Query: 63  -GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
              IHRD+   N+L+     +K++DFGL    +  H  D+Y+  +  +
Sbjct: 210 KKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKTTNGR 254

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 46.4 bits (111), Expect = 7e-06
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 65  IHRDIKPDNLLLDARGHIKLSDFGL 89
           IHRD+K  N+LLD      + DFGL
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGL 180

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKP 71
           +PI  Y+I EF+  G ++  L   +   +   +   + A+ A  +  I +  +IHRD++ 
Sbjct: 255 EPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 312

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+L+ A    K++DFGL
Sbjct: 313 ANILVSASLVCKIADFGL 330

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 13/102 (12%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQF----------YIAETALAIDSIHKLGFIHR 67
             +IME +  GD+ + L                          E A  +  ++   F+HR
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162

Query: 68  DIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
           D+   N ++     +K+ DFG+    +  + TD+YR   +  
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKGL 201

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 55  AIDSIHKLGFIHRDIKPDNLLL--DARGHIKLSDFGLCTGLKKSHRTD----FYR 103
            +D++HK   IH D+KP+N+LL    R  IK+ DFG      +   T     FYR
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYR 266

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           Y APEV L   YG   D WSLG I+ E+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAEL 292

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV L   YG   D WSLG I+ E+
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAEL 292

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +PI  Y+I E++  G ++  L       L+        A+ A  +  I +  +IHRD++ 
Sbjct: 80  EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRA 137

Query: 72  DNLLLDARGHIKLSDFGL 89
            N+L+      K++DFGL
Sbjct: 138 ANILVSDTLSCKIADFGL 155

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLLL 76
             +++ ++  GD+   +  +              + A  +  +    F+HRD+   N +L
Sbjct: 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 161

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYR 103
           D +  +K++DFGL    +  +  ++Y 
Sbjct: 162 DEKFTVKVADFGLA---RDMYDKEYYS 185

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           T  Y + EV + +GY   AD WS   + +E+ 
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELA 287

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           + EV + +GY   AD WS   + +E+ 
Sbjct: 261 SLEVLIGSGYNTPADIWSTACMAFELA 287

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 1/88 (1%)

Query: 40  LSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR 98
           L   C +  I +    +D +H K   IH DIKP+N+LL              T  ++S  
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202

Query: 99  TDFYRDLSQAKPSDFSYPPFCSENPQET 126
                      P+           P+  
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNA 230

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 18  LYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
           LY++ E++  G ++  L  +    L  +C   +  +   A++ +    F+HRD+   N+L
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 321

Query: 76  LDARGHIKLSDFGL 89
           +      K+SDFGL
Sbjct: 322 VSEDNVAKVSDFGL 335

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 52  TALAIDSIHKLGFIHRDIKPDNLLL--DARGHIKLSDFGLCTGLKKSH----RTDFYR 103
           TAL   +  +L  IH D+KP+N+LL    R  IK+ DFG    L +      ++ FYR
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYR 225

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           Y +PEV L   Y  A D WSLG I+ EM
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEM 251

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           +PEV L   Y  A D WSLG I+ EM
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEM 251

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------------- 62
           LYL +E+ P G+++  L K   L  +        TA  + S   L               
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160

Query: 63  -GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
             FIHRD+   N+L+      K++DFGL      S   + Y   +  +
Sbjct: 161 KQFIHRDLAARNILVGENYVAKIADFGL------SRGQEVYVKKTMGR 202

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 11/86 (12%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKP 71
            D     L+ EF+  G + T L K         +  +A + A A+  + +   IH ++  
Sbjct: 84  GDEN--ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCA 141

Query: 72  DNLLLDARGH--------IKLSDFGL 89
            N+LL             IKLSD G+
Sbjct: 142 KNILLIREEDRKTGNPPFIKLSDPGI 167

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 19/108 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG-------------- 63
           L ++ E++  GD+   L      +         +    +     L               
Sbjct: 92  LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS 151

Query: 64  --FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
             F+HRD+   N L+ A   +K+ DFG+    +  + TD+YR      
Sbjct: 152 QHFVHRDLATRNCLVGANLLVKIGDFGMS---RDVYSTDYYRVGGHTM 196

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 17/96 (17%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 1   MKDYACLKQLR------MSDPINLYLIMEFLPGGDMMT-LLMKKDTLSEECTQFYIAETA 53
           M+       L         + +  ++++ ++  GD++  +   +   + +    +  + A
Sbjct: 76  MRGLNHPNVLALIGIMLPPEGL-PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA 134

Query: 54  LAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
             ++ + +  F+HRD+   N +LD    +K++DFGL
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGL 170

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 27/116 (23%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK---------------- 61
           + L+ E++  GD+   L      +          T   + S                   
Sbjct: 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVA 184

Query: 62  --------LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
                     F+HRD+   N L+     +K++DFGL    +  +  D+Y+      
Sbjct: 185 AGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS---RNIYSADYYKADGNDA 237

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 18/107 (16%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL--AIDSIH-------------KL 62
           L ++ E++  GD+   L      ++                  +               L
Sbjct: 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL 177

Query: 63  GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
            F+HRD+   N L+     +K+ DFG+    +  + TD+YR   +  
Sbjct: 178 HFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTDYYRVGGRTM 221

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 19/108 (17%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH----------------K 61
           L +I  +   GD+   L+ +   S+  +         A++                    
Sbjct: 87  LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 146

Query: 62  LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
              +H+D+   N+L+  + ++K+SD GL   +   +  D+Y+ L  + 
Sbjct: 147 HHVVHKDLATRNVLVYDKLNVKISDLGLFREV---YAADYYKLLGNSL 191

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLLL 76
             +++ ++  GD+   +  +              + A  +  +    F+HRD+   N +L
Sbjct: 166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 225

Query: 77  DARGHIKLSDFGL 89
           D +  +K++DFGL
Sbjct: 226 DEKFTVKVADFGL 238

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           Y APEV L  G+  ++D WS G ++ E+
Sbjct: 225 YRAPEVILNLGWDVSSDMWSFGCVLAEL 252

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV L  G+  ++D WS G ++ E+
Sbjct: 227 APEVILNLGWDVSSDMWSFGCVLAEL 252

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 27/116 (23%)

Query: 18  LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKL------------- 62
           L LI+E+   G +   L +          +      ++L       L             
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160

Query: 63  ---------GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
                      +HRD+   N+L+     +K+SDFGL    +  +  D Y   SQ +
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS---RDVYEEDSYVKRSQGR 213

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           Y APEV L  G+    D WS+G I+ E 
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEY 227

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
           APEV L  G+    D WS+G I+ E 
Sbjct: 202 APEVILALGWSQPCDVWSIGCILIEY 227

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 43.1 bits (102), Expect = 9e-05
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEM 315
           Y  PEV L+ G+    D WS+G I++E 
Sbjct: 205 YRPPEVILELGWAQPCDVWSIGCILFEY 232

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
            PEV L+ G+    D WS+G I++E 
Sbjct: 207 PPEVILELGWAQPCDVWSIGCILFEY 232

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 10/76 (13%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D  N  ++M ++ G         KD + +        +    +  +HK   IH D+   N
Sbjct: 410 DLDNKRIMMSYINGKLA------KDVIEDNLD--IAYKIGEIVGKLHKNDVIHNDLTTSN 461

Query: 74  LLLDARGHIKLSDFGL 89
            + D    + + DFGL
Sbjct: 462 FIFDKD--LYIIDFGL 475

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	351
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.98
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.95
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.94
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.93
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.92
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.91
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.9
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.9
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.9
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.9
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.89
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.89
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.89
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.89
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.89
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.88
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.88
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.88
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.88
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.88
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.88
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.88
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.87
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.87
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.87
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.87
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.87
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.87
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.87
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.87
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.87
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.87
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.87
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.87
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.87
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.87
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.87
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.87
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.87
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.87
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.86
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.86
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.86
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.86
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.86
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.86
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.86
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.86
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.86
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.86
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.86
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.86
3niz_A	311	Rhodanese family protein; structural genomics, str	99.86
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.86
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.86
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.86
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.86
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.86
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.86
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.86
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.86
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.86
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.86
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.86
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.86
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.86
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.86
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.86
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.86
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.86
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.86
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.86
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.85
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.85
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.85
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.85
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.85
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.85
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.85
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.85
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.85
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.85
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.85
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.85
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.85
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.85
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.85
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.85
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.85
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.85
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.85
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.85
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.85
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.85
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.85
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.85
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.84
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.84
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.84
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.84
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.84
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.84
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.84
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.84
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.84
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.84
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.84
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.84
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.84
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.84
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.84
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.84
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.84
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.84
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.84
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.84
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.84
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.84
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.84
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.84
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.84
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.84
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.84
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.84
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.84
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.83
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.83
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.83
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.83
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.83
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.83
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.83
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.83
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.83
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.83
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.83
3bhy_A	283	Death-associated protein kinase 3; death associate	99.83
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.83
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.83
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.83
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.83
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.83
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.82
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.82
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.82
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.82
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.82
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.82
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.82
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.82
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.82
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.82
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.82
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.82
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.82
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.82
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.82
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.82
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.82
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.82
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.82
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.82
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.82
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.81
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.81
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.81
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.81
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.81
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.81
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.81
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.81
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.81
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.81
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.81
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.81
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.81
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.81
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.81
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.81
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.8
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.8
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.8
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.8
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.8
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.8
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.8
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.79
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.79
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.79
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.79
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.78
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.76
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.76
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.76
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.75
3uqc_A	286	Probable conserved transmembrane protein; structur	99.66
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.46
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.46
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.27
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.94
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.42
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.37
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	98.35
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.32
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.31
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.27
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.25
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.21
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.12
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.1
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.1
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.89
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	97.82
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.8
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	97.67
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	97.65
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	97.64
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.64
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	97.63
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	97.61
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	97.6
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	97.58
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	97.57
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	97.56
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.53
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	97.5
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	97.5
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	97.49
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	97.48
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	97.48
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	97.48
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.47
4aoj_A	329	High affinity nerve growth factor receptor; transf	97.47
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	97.46
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	97.43
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.42
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.4
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	97.39
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	97.38
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.37
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	97.34
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.33
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.31
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.31
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	97.31
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	97.29
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	97.27
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	97.27
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	97.26
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.25
3o0g_A	292	Cell division protein kinase 5; kinase activator c	97.23
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	97.22
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.2
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	97.2
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	97.19
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	97.16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	97.15
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	97.15
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	97.14
3niz_A	311	Rhodanese family protein; structural genomics, str	97.14
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	97.13
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	97.13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.13
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.12
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	97.11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	97.09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.08
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	97.07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	97.04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	97.04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	97.04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	97.03
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	97.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	96.99
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	96.99
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.98
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.98
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	96.98
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	96.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	96.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	96.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	96.93
3bhy_A	283	Death-associated protein kinase 3; death associate	96.93
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	96.93
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.92
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	96.92
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	96.91
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.91
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.91
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	96.91
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	96.9
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	96.89
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	96.89
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.89
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	96.88
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.87
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	96.87
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	96.87
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	96.87
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	96.85
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.85
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.84
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	96.83
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	96.82
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	96.8
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.79
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	96.78
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.78
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	96.76
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	96.75
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	96.75
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	96.74
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	96.74
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.73
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	96.72
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	96.71
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	96.69
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	96.68
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	96.68
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	96.66
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	96.66
3fme_A	290	Dual specificity mitogen-activated protein kinase;	96.65
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.65
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.65
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	96.65
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	96.64
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	96.63
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	96.63
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.62
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	96.62
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	96.61
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.59
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	96.58
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	96.57
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	96.57
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	96.56
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	96.56
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	96.55
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	96.55
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	96.53
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	96.53
3ork_A	311	Serine/threonine protein kinase; structural genomi	96.52
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	96.52
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.51
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	96.51
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	96.49
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	96.48
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	96.48
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	96.48
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.47
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	96.46
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.45
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	96.45
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.45
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.45
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.44
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	96.43
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	96.43
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	96.43
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	96.43
2a19_B	284	Interferon-induced, double-stranded RNA-activated	96.42
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	96.42
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	96.41
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.41
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	96.4
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.4
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	96.39
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	96.38
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	96.35
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	96.35
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.34
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	96.34
3q4u_A	301	Activin receptor type-1; structural genomics conso	96.34
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	96.34
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	96.33
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	96.33
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	96.33
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	96.32
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	96.32
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	96.31
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	96.31
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	96.3
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	96.3
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	96.29
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	96.29
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	96.28
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	96.27
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	96.27
3pls_A	298	Macrophage-stimulating protein receptor; protein k	96.27
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	96.26
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	96.26
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	96.26
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	96.26
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	96.26
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.26
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	96.24
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	96.21
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	96.21
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	96.21
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.2
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.19
3aln_A	327	Dual specificity mitogen-activated protein kinase;	96.19
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	96.18
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	96.17
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	96.17
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	96.17
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.16
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	96.16
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.15
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	96.14
3soc_A	322	Activin receptor type-2A; structural genomics cons	96.13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	96.11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	96.1
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	96.08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	96.07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	96.06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	96.04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	96.03
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.02
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	96.01
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	95.98
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	95.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	95.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	95.93
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	95.93
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	95.91
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	95.9
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	95.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	95.9
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	95.89
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	95.87
2dyl_A	318	Dual specificity mitogen-activated protein kinase	95.82
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	95.78
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	95.74

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.3e-37  Score=290.52  Aligned_cols=186  Identities=28%  Similarity=0.580  Sum_probs=156.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++..++|||||||+||+|.+++.+.+.++|.+++.|+.||+.||+|||++|||||||||+|||++.+|++|
T Consensus        93 nIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vK  172 (311)
T 4aw0_A           93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQ  172 (311)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEE
T ss_pred             CCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEE
Confidence            56778889999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC----cccccccCCCCC-----------Cccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         84 LSDFGLCTGLKKSH----RTDFYRDLSQAK-----------PSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        84 l~DFGla~~~~~~~----~~~~~~~~~~~~-----------~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      |+|||+|+.+....    ...+++++.|..           ..|+            +.+||.+.+..+++.+|...  .
T Consensus       173 l~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~--~  250 (311)
T 4aw0_A          173 ITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--E  250 (311)
T ss_dssp             ECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--C
T ss_pred             EEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--C
Confidence            99999998654221    122333333333           3343            27999999999999999974  5


Q ss_pred             eeCCCCCCCCHHHHHHHHHH-hcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCCC
Q psy17600        137 LVFPPEVPISEEARETIVRF-CSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPAA  196 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~~  196 (351)
                      +.+|..  +|++++|+|.++ ..||.+|++..  .+..+++   .||||+++||+.|.++++|
T Consensus       251 ~~~p~~--~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~---~Hp~F~~idw~~l~~~~pP  308 (311)
T 4aw0_A          251 YDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLK---AHPFFESVTWENLHQQTPP  308 (311)
T ss_dssp             CCCCTT--CCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHH---TSGGGTTCCCTTGGGSCCC
T ss_pred             CCCCcc--cCHHHHHHHHHHccCCHhHCcChHHHcCCHHHH---CCCCcCCCCHHHhcCCCCC
Confidence            677764  899999999995 57999999874  3566677   8999999999999887644

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=5.7e-37  Score=313.73  Aligned_cols=201  Identities=27%  Similarity=0.505  Sum_probs=165.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++..++|||||||+||+|.++|.+.+.+++..+++|++||+.||+|||++|||||||||+|||++.+|++|
T Consensus       253 ~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vK  332 (689)
T 3v5w_A          253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR  332 (689)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEE
T ss_pred             CEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEE
Confidence            67889999999999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcccccccC------------CCCCCcccC------------CCCCCCC---CHHHHHHHHHcCCCc
Q psy17600         84 LSDFGLCTGLKKSHRTDFYRDL------------SQAKPSDFS------------YPPFCSE---NPQETYRKVMSWRDT  136 (351)
Q Consensus        84 l~DFGla~~~~~~~~~~~~~~~------------~~~~~~~~~------------~~Pf~~~---~~~~~~~~i~~~~~~  136 (351)
                      |+|||+|+.+........++++            .+....|||            .+||.+.   +..++++.+..  ..
T Consensus       333 L~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~  410 (689)
T 3v5w_A          333 ISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MA  410 (689)
T ss_dssp             ECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH--CC
T ss_pred             ecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC--CC
Confidence            9999999876544333333322            234445553            7999864   45567777775  45


Q ss_pred             eeCCCCCCCCHHHHHHHHHHh-cCccccCCC-CCChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCC
Q psy17600        137 LVFPPEVPISEEARETIVRFC-SECDRRLGS-ARGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFD  211 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~-~~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~  211 (351)
                      +.+|..  +|++++++|.+++ +||.+|+|. ..|+++|+   .||||+++||+.|..+.  +|+.|.+.+..+.++||
T Consensus       411 ~~~p~~--~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~---~HpfF~~idW~~l~~~~~~pP~~P~~~~~~~~~~fD  484 (689)
T 3v5w_A          411 VELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK---ESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFD  484 (689)
T ss_dssp             CCCCTT--SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT---TSGGGTTCCHHHHHTTCSCCSCCCCTTCSSTTBCCC
T ss_pred             CCCCcc--CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh---cCccccCCCHHHHHcCCCCcCccCCCCCCCcCCCCC
Confidence            667764  8999999999954 799999997 46888988   88999999999998775  44445566666666665

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.9e-36  Score=282.72  Aligned_cols=189  Identities=37%  Similarity=0.633  Sum_probs=157.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.+.+.+++.+++.|+.|++.||+|||++|||||||||+|||++.+|++|
T Consensus        87 nIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vK  166 (304)
T 3ubd_A           87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIK  166 (304)
T ss_dssp             TEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEE
T ss_pred             CCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEE
Confidence            57788889999999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--cccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH--RTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~--~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+......  ....+++..           +....|+            +.+||.+.+..+++.+|...  .+.
T Consensus       167 l~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~  244 (304)
T 3ubd_A          167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLG  244 (304)
T ss_dssp             EESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC
T ss_pred             ecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC--CCC
Confidence            99999998643221  112223322           3333443            27999999999999999874  456


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCCc
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPV  199 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~  199 (351)
                      +|..  +|++++++|.+ |..||.+|+++. .+.+++.   +||||+++||+.|.+++.++|+
T Consensus       245 ~p~~--~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil---~Hp~f~~idw~~l~~~~~~pP~  302 (304)
T 3ubd_A          245 MPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK---RHSFFSTIDWNKLYRREIHPPF  302 (304)
T ss_dssp             CCTT--SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSS
T ss_pred             CCCc--CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHH---cCccccCCCHHHHHhCCCCcCc
Confidence            6654  89999999999 558999999975 4677888   8999999999999888766654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-34  Score=281.19  Aligned_cols=240  Identities=35%  Similarity=0.634  Sum_probs=177.7

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+++.++..|++...+|||||||+||+|.+++.+. ..+++..++.|+.|++.||+|||++|||||||||+|||++.+|+
T Consensus       121 p~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~  200 (412)
T 2vd5_A          121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH  200 (412)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             CCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC
Confidence            35677888999999999999999999999999875 47999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCC--------cccccccC-------------CCCCCccc------------CCCCCCCCCHHHHHH
Q psy17600         82 IKLSDFGLCTGLKKSH--------RTDFYRDL-------------SQAKPSDF------------SYPPFCSENPQETYR  128 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~--------~~~~~~~~-------------~~~~~~~~------------~~~Pf~~~~~~~~~~  128 (351)
                      +||+|||+|+......        .+..|..+             .+....|+            +.+||.+.+..+++.
T Consensus       201 vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~  280 (412)
T 2vd5_A          201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG  280 (412)
T ss_dssp             EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence            9999999997654321        12222211             12333444            279999999999999


Q ss_pred             HHHcCCCceeCCCC-CCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcC
Q psy17600        129 KVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDT  207 (351)
Q Consensus       129 ~i~~~~~~~~~p~~-~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~  207 (351)
                      +|......+.+|.. ..+|++++++|.+++.+|.+|+|. .++++++   .||||+++||+.+++..+|+.|.+.+..|+
T Consensus       281 ~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~~p~~Rlgr-~~~~ei~---~Hpff~~i~w~~l~~~~~p~~p~~~~~~d~  356 (412)
T 2vd5_A          281 KIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGR-GGAGDFR---THPFFFGLDWDGLRDSVPPFTPDFEGATDT  356 (412)
T ss_dssp             HHHTHHHHCCCC----CCCHHHHHHHHTTSSCGGGCTTT-TTHHHHH---TSGGGTTCCSTTSTTSCCSCCCC-----CC
T ss_pred             HHHhcccCcCCCccccCCCHHHHHHHHHHcCChhhcCCC-CCHHHHh---cCCCcCCCCHHHHhhcCCCCCCcCCCcccc
Confidence            99875545556642 358999999999977799999984 3688888   899999999999988888888899999999


Q ss_pred             CCCCCCCCCCCCC-----CCCCCCCCccccccCccccccccccc
Q psy17600        208 SNFDDFPDVKLEI-----PSAPLPQDGEIIYKDWVFINYTFKRF  246 (351)
Q Consensus       208 ~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (351)
                      +|||.+.+.....     +.............+..|.||+|...
T Consensus       357 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~  400 (412)
T 2vd5_A          357 CNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCM  400 (412)
T ss_dssp             SSCC--CCCCCTTSSSSSCCTTTC-----CCTTGGGTTCCBSCC
T ss_pred             cccCcccccccccccccCCCcccccCCCccccCCCCCCCcccCc
Confidence            9999754321111     00111111122345567889998853

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.9e-34  Score=281.01  Aligned_cols=241  Identities=38%  Similarity=0.662  Sum_probs=183.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..|++...+|||||||+||+|.+++.+ .+.+++..++.++.|++.||.|||++|||||||||+|||++.+|++
T Consensus       135 ~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~v  214 (437)
T 4aw2_A          135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI  214 (437)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             CEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCE
Confidence            566778899999999999999999999999987 4789999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC--------cccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHH
Q psy17600         83 KLSDFGLCTGLKKSH--------RTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVM  131 (351)
Q Consensus        83 kl~DFGla~~~~~~~--------~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~  131 (351)
                      ||+|||+|+......        .+..|..+           .+....|+            +.+||.+.+..+++.+|+
T Consensus       215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~  294 (437)
T 4aw2_A          215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM  294 (437)
T ss_dssp             EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhh
Confidence            999999997553321        12222221           12223343            379999999999999998


Q ss_pred             cCCCceeCCCC-CCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcccCCCCcCCCC
Q psy17600        132 SWRDTLVFPPE-VPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNF  210 (351)
Q Consensus       132 ~~~~~~~~p~~-~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~~~~~~d~~~f  210 (351)
                      .....+.+|.. ..+|++++++|.+++..++.|++. .++++++   .||||+++||+.+++.++|+.|.+.+..|++||
T Consensus       295 ~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r-~~~~eil---~Hpff~~i~w~~l~~~~~p~~P~~~~~~d~~~f  370 (437)
T 4aw2_A          295 NHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQ-NGIEDFK---KHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNF  370 (437)
T ss_dssp             THHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTT-TTTHHHH---TSGGGTTCCTTTGGGSCCSCCCCCSSTTCCTTS
T ss_pred             hccccccCCcccccCCHHHHHHHHHHhcccccccCC-CCHHHHh---CCCccCCCCHHHHhhCCCCCCCcCCCccchhhc
Confidence            76556777766 348999999999977666777663 4678888   889999999999998889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCccccccccccccc
Q psy17600        211 DDFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRFEA  248 (351)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (351)
                      |............+.+........+..|.+|+|.....
T Consensus       371 d~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  408 (437)
T 4aw2_A          371 DVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCV  408 (437)
T ss_dssp             CCC------------------CCTTGGGTTCCEESSCT
T ss_pred             CCcccccccccCCCCCccccccccCccccCCCcCCchh
Confidence            86432211111111111122334567899999986443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=8.9e-34  Score=277.55  Aligned_cols=236  Identities=36%  Similarity=0.663  Sum_probs=186.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.+ ..+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus       130 ~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ik  208 (410)
T 3v8s_A          130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK  208 (410)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             CCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEE
Confidence            567788899999999999999999999999876 4699999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--------cccccccCC----------CCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSH--------RTDFYRDLS----------QAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~--------~~~~~~~~~----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||+|+......        .+..|..+.          +....|+            +.+||.+.+..+++.+|+..
T Consensus       209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  288 (410)
T 3v8s_A          209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH  288 (410)
T ss_dssp             ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred             EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc
Confidence            99999997654321        122222211          2233443            37999999999999999986


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHhcCccccCCCCCChHHHhcCCCCCCccCCCchhhh--cCCCCCCcccCCCCcCCCCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR--ERPAAIPVQVKSIDDTSNFD  211 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~--~~~~~~~~~~~~~~d~~~f~  211 (351)
                      ...+.+|....+|++++++|.+++.+++.|+| ..++++|+   .||||+++||+.+.  +..+|+.|.+.+..|++|||
T Consensus       289 ~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlg-R~~~~ei~---~Hp~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd  364 (410)
T 3v8s_A          289 KNSLTFPDDNDISKEAKNLICAFLTDREVRLG-RNGVEEIK---RHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD  364 (410)
T ss_dssp             HHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTT-SSCHHHHH---TSGGGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSC
T ss_pred             cccccCCCcccccHHHHHHHHHHccChhhhCC-CCCHHHHh---cCccccCCCHHHHhhcccCCCCCCcCCCccchhhcC
Confidence            66678888778999999999998888888877 45788888   88999999998764  44667777899999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCccccccccccc
Q psy17600        212 DFPDVKLEIPSAPLPQDGEIIYKDWVFINYTFKRF  246 (351)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (351)
                      ++.+........+.+.  ........|.||+|..-
T Consensus       365 ~~~~~~~~~~~~~~~~--~~~~~~~~f~~f~~~~~  397 (410)
T 3v8s_A          365 DLEEDKGEEETFPIPK--AFVGNQLPFVGFTYYSN  397 (410)
T ss_dssp             CCCSCCSCCCCCCCCS--SCCCTTGGGTTCCEECC
T ss_pred             CccccccccccCCCch--hhcccccccccceEeCc
Confidence            8766443322222221  22344567899998853

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=7.7e-33  Score=267.64  Aligned_cols=207  Identities=29%  Similarity=0.579  Sum_probs=160.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++|
T Consensus       100 ~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ik  179 (373)
T 2r5t_A          100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIV  179 (373)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             CCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEE
Confidence            45667888999999999999999999999999888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--CcccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS--HRTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~--~~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+.....  .....+++..           +....|+            +.+||.+.+..+++++|...  .+.
T Consensus       180 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~  257 (373)
T 2r5t_A          180 LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQ  257 (373)
T ss_dssp             ECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS--CCC
T ss_pred             EeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--ccC
Confidence            9999999753221  1112222222           2233343            37999999999999999874  456


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC-CC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD-FP  214 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~-~~  214 (351)
                      +|+.  ++++++++|.+++ .+|.+|++...+.++++   .||||+++||+.+.++.  +|+.|.+.+..|++|||. |+
T Consensus       258 ~~~~--~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~---~h~~f~~~~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~  332 (373)
T 2r5t_A          258 LKPN--ITNSARHLLEGLLQKDRTKRLGAKDDFMEIK---SHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFT  332 (373)
T ss_dssp             CCSS--SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCSCCC------------
T ss_pred             CCCC--CCHHHHHHHHHHcccCHHhCCCCCCCHHHHh---CCccccCCCHHHHHhCCCCCCCCCCCCCcchhhhcCcccc
Confidence            6654  8999999999955 79999999988888888   88999999999997664  555567889999999984 66


Q ss_pred             CCC
Q psy17600        215 DVK  217 (351)
Q Consensus       215 ~~~  217 (351)
                      +..
T Consensus       333 ~~~  335 (373)
T 2r5t_A          333 EEP  335 (373)
T ss_dssp             ---
T ss_pred             ccc
Confidence            544

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.9e-32  Score=262.92  Aligned_cols=202  Identities=32%  Similarity=0.566  Sum_probs=166.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|..++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus        85 ~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ik  164 (353)
T 3txo_A           85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK  164 (353)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             ceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEE
Confidence            56778889999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--cccccccCCC-----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH--RTDFYRDLSQ-----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~--~~~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+......  ....+++..+           ....|+            +.+||.+.+..+++.+|..  ..+.
T Consensus       165 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~  242 (353)
T 3txo_A          165 LADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN--DEVV  242 (353)
T ss_dssp             ECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC
T ss_pred             EccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC
Confidence            99999998532211  1112222222           233343            3799999999999999987  4566


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCC--CCChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGS--ARGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~--~~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~  212 (351)
                      +|..  ++++++++|.++ ..+|.+|++.  ..|.++++   .||||+++||+.+..+.  +|+.|.+++..|++|||.
T Consensus       243 ~p~~--~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il---~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~~~~~f~~  316 (353)
T 3txo_A          243 YPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAIL---RHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDP  316 (353)
T ss_dssp             CCTT--SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCH
T ss_pred             CCCC--CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHh---hCCcccCCCHHHHhcCcCCCCccCCCCCcccccccCc
Confidence            7754  899999999995 4799999997  36778888   88999999999997764  455567889999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=7.9e-32  Score=257.03  Aligned_cols=205  Identities=28%  Similarity=0.520  Sum_probs=167.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++|
T Consensus        66 ~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vk  145 (337)
T 1o6l_A           66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK  145 (337)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             cCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEE
Confidence            45667888999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC-C-c-----ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS-H-R-----TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~-~-~-----~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+..... . .     +..|..+      .+....|+            +.+||.+.+...++..|..  ..+.
T Consensus       146 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~  223 (337)
T 1o6l_A          146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--EEIR  223 (337)
T ss_dssp             ECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC
T ss_pred             EeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCC
Confidence            9999999753221 1 1     1122211      22233343            2689999999999999886  4566


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC-C
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD-F  213 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~-~  213 (351)
                      +|..  +|++++++|.+++ .+|.+|+|.. .++++++   .||||+++||+.+.++.  +|+.|.+.+..|+++|++ |
T Consensus       224 ~p~~--~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~---~h~~f~~~~~~~~~~~~~~pp~~p~~~~~~d~~~f~~~~  298 (337)
T 1o6l_A          224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM---EHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF  298 (337)
T ss_dssp             CCTT--SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHH
T ss_pred             CCCC--CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHH---cCCCcCCCCHHHHHhCCCCCCCCCCCCCcchhhcccchh
Confidence            7754  7999999999955 7999999874 4678888   88999999999997664  555567889999999984 5


Q ss_pred             CC
Q psy17600        214 PD  215 (351)
Q Consensus       214 ~~  215 (351)
                      +.
T Consensus       299 ~~  300 (337)
T 1o6l_A          299 TA  300 (337)
T ss_dssp             HT
T ss_pred             cc
Confidence            44

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.98  E-value=4.4e-32  Score=264.40  Aligned_cols=205  Identities=28%  Similarity=0.554  Sum_probs=164.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus       114 ~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ik  193 (396)
T 4dc2_A          114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK  193 (396)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             CcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEE
Confidence            56778889999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcC-CC-cccccccC-----------CCCCCccc------------CCCCCCCC---------CHHHHHHH
Q psy17600         84 LSDFGLCTGLKK-SH-RTDFYRDL-----------SQAKPSDF------------SYPPFCSE---------NPQETYRK  129 (351)
Q Consensus        84 l~DFGla~~~~~-~~-~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~---------~~~~~~~~  129 (351)
                      |+|||+|+.... .. ....+++.           .+....|+            +.+||.+.         ....+++.
T Consensus       194 L~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~  273 (396)
T 4dc2_A          194 LTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  273 (396)
T ss_dssp             ECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH
T ss_pred             EeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH
Confidence            999999975321 11 11122222           22333443            26899642         33456777


Q ss_pred             HHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCC
Q psy17600        130 VMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSI  204 (351)
Q Consensus       130 i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~  204 (351)
                      |..  ..+.+|..  +|++++++|.++ ..+|.+|++..  .|.++++   .||||+++||+.+.+++  +|+.|.+.+.
T Consensus       274 i~~--~~~~~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~---~Hpff~~i~w~~l~~~~~~pp~~p~~~~~  346 (396)
T 4dc2_A          274 ILE--KQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ---GHPFFRNVDWDMMEQKQVVPPFKPNISGE  346 (396)
T ss_dssp             HHH--CCCCCCTT--SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHH---HSTTTTTCCHHHHHTTCSCCSCCCCCCSS
T ss_pred             Hhc--cccCCCCc--CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHh---cCccccCCCHHHHHcCCCCCCCcCCCCCc
Confidence            775  45667764  899999999995 47999999974  4677888   88999999999997764  5556778899


Q ss_pred             CcCCCCCC-CCC
Q psy17600        205 DDTSNFDD-FPD  215 (351)
Q Consensus       205 ~d~~~f~~-~~~  215 (351)
                      .|++|||. |++
T Consensus       347 ~d~~~fd~~~~~  358 (396)
T 4dc2_A          347 FGLDNFDSQFTN  358 (396)
T ss_dssp             TTGGGSCHHHHT
T ss_pred             cchhhcChhhcc
Confidence            99999985 554

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=1e-32  Score=262.58  Aligned_cols=90  Identities=26%  Similarity=0.436  Sum_probs=84.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~   82 (351)
                      +++.++..|++...+|||||||+||+|.++|.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.+| ++
T Consensus       111 nIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~v  190 (336)
T 4g3f_A          111 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRA  190 (336)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCE
T ss_pred             CCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEE
Confidence            46777888999999999999999999999999888999999999999999999999999999999999999999998 69


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+|+.+
T Consensus       191 Kl~DFGla~~~  201 (336)
T 4g3f_A          191 ALCDFGHALCL  201 (336)
T ss_dssp             EECCCTTCEEC
T ss_pred             EEeeCCCCeEc
Confidence            99999998754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=8.9e-32  Score=278.78  Aligned_cols=202  Identities=28%  Similarity=0.549  Sum_probs=167.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+||||||++||+|..++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++|
T Consensus       403 ~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ik  482 (674)
T 3pfq_A          403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK  482 (674)
T ss_dssp             TBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEE
T ss_pred             eEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEE
Confidence            56677888999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--CcccccccCCC-----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS--HRTDFYRDLSQ-----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~--~~~~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+.....  ....+.++..|           ....|+            +.+||.+.+..++++.|+.  ..+.
T Consensus       483 L~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~--~~~~  560 (674)
T 3pfq_A          483 IADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--HNVA  560 (674)
T ss_dssp             ECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS--SCCC
T ss_pred             EeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh--CCCC
Confidence            9999999853221  11122223333           233343            3799999999999999997  4567


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDDF  213 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~~  213 (351)
                      +|..  +|++++++|.+++ .+|.+|++.. .++++|+   .||||+++||+.+.++.  +|+.|.+.+ .|++|||.+
T Consensus       561 ~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~---~h~ff~~i~w~~l~~~~~~pp~~p~~~~-~~~~~f~~~  633 (674)
T 3pfq_A          561 YPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIK---EHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFDRF  633 (674)
T ss_dssp             CCTT--SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH---SSGGGSSCCHHHHTTTCSCCSCCCBCCG-GGHHHHTTT
T ss_pred             CCcc--CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh---cCccccCCCHHHHHhCCCCCCCCCcCCC-CchhhcCch
Confidence            7764  8999999999955 7999999973 5677888   88999999999998775  445556666 899999863

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=7.8e-32  Score=258.71  Aligned_cols=201  Identities=28%  Similarity=0.526  Sum_probs=162.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|++|
T Consensus        82 ~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vk  161 (353)
T 2i0e_A           82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK  161 (353)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             EEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEE
Confidence            56677888999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--c-----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH--R-----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~--~-----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+......  .     +..|..      ..+....|+            +.+||.+.+..+++++|..  ..+.
T Consensus       162 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~  239 (353)
T 2i0e_A          162 IADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--HNVA  239 (353)
T ss_dssp             ECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC
T ss_pred             EEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh--CCCC
Confidence            99999998532211  1     111211      122333343            3799999999999999987  4566


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~  212 (351)
                      +|..  +|++++++|.+++ .+|.+|++.. .++++++   .||||+++||+.+..+.  +|+.|.+.+. |++|||.
T Consensus       240 ~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~---~h~~f~~~~w~~l~~~~~~~p~~p~~~~~-~~~~f~~  311 (353)
T 2i0e_A          240 YPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIK---EHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDR  311 (353)
T ss_dssp             CCTT--SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCCC---CHHHH
T ss_pred             CCCC--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh---cCccccCCCHHHHHhCCCCCCcCCCCCCc-chhhccc
Confidence            7764  8999999999955 7999999974 4677887   89999999999997665  4445566667 9999985

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=4.4e-31  Score=249.74  Aligned_cols=207  Identities=31%  Similarity=0.626  Sum_probs=157.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus        67 ~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  146 (318)
T 1fot_A           67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK  146 (318)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEE
T ss_pred             CCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEE
Confidence            45667788999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSHR----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~~----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      |+|||+++.......    +..|..      ..+....|+            +.+||.+.+..+.+.+|...  .+.+|.
T Consensus       147 L~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~p~  224 (318)
T 1fot_A          147 ITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--ELRFPP  224 (318)
T ss_dssp             ECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CCCCCT
T ss_pred             EeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCC
Confidence            999999986543221    111211      122333443            37999999999999999874  456675


Q ss_pred             CCCCCHHHHHHHHHHh-cCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccC-CCCcCCCCCCCCCC
Q psy17600        142 EVPISEEARETIVRFC-SECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVK-SIDDTSNFDDFPDV  216 (351)
Q Consensus       142 ~~~~s~~~~dli~~l~-~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~-~~~d~~~f~~~~~~  216 (351)
                      .  ++++++++|.+++ .+|.+|++... ++++++   .||||++++|+.+..+..  |+.|.+. +..|+++||++++.
T Consensus       225 ~--~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~---~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~d~~~f~~~~~~  299 (318)
T 1fot_A          225 F--FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK---NHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEE  299 (318)
T ss_dssp             T--SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHH---TSGGGSSCCHHHHHTTCSCCSCCCCC----------------
T ss_pred             C--CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHh---cCccccCCCHHHHHhCCCCCCCCCCcCCCccchhhcCCCCcc
Confidence            4  7899999999955 79999998753 788888   889999999999977754  4444555 58899999988764


Q ss_pred             C
Q psy17600        217 K  217 (351)
Q Consensus       217 ~  217 (351)
                      .
T Consensus       300 ~  300 (318)
T 1fot_A          300 D  300 (318)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=2e-31  Score=255.03  Aligned_cols=203  Identities=28%  Similarity=0.543  Sum_probs=149.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|++|
T Consensus        79 ~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vk  158 (345)
T 1xjd_A           79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIK  158 (345)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             CCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEE
Confidence            56677889999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--CcccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS--HRTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~--~~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+.....  ......++.           .+....|+            +.+||.+.+..+++.+|...  ...
T Consensus       159 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~  236 (345)
T 1xjd_A          159 IADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPF  236 (345)
T ss_dssp             ECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC
T ss_pred             EeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCC
Confidence            9999999754221  111112222           22333343            37999999999999999874  455


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC-CC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD-FP  214 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~-~~  214 (351)
                      +|..  +|++++++|.+++ .+|.+|++..   ++++   .||||+++||+.+..++  +|+.|.+.+..|++|||. |+
T Consensus       237 ~p~~--~s~~~~~li~~lL~~dp~~R~~~~---~~i~---~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~d~~~f~~~~~  308 (345)
T 1xjd_A          237 YPRW--LEKEAKDLLVKLFVREPEKRLGVR---GDIR---QHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFL  308 (345)
T ss_dssp             CCTT--SCHHHHHHHHHHSCSSGGGSBTTB---SCGG---GSGGGTTCCHHHHHTTCSCC--------------------
T ss_pred             CCcc--cCHHHHHHHHHHhcCCHhHcCCCh---HHHH---cCccccCCCHHHHhhCCCCCCcCCCCCCcchhhhcchhhc
Confidence            6654  7999999999955 7999999864   2555   89999999999997764  455567889999999985 65


Q ss_pred             CC
Q psy17600        215 DV  216 (351)
Q Consensus       215 ~~  216 (351)
                      +.
T Consensus       309 ~~  310 (345)
T 1xjd_A          309 NE  310 (345)
T ss_dssp             --
T ss_pred             cc
Confidence            53

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=1e-30  Score=250.48  Aligned_cols=208  Identities=32%  Similarity=0.621  Sum_probs=171.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus       102 ~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  181 (350)
T 1rdq_E          102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ  181 (350)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             CCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEE
Confidence            45667788999999999999999999999999888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSHR----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~~----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      |+|||+++.......    +..|..      ..+....|+            +.+||.+.+..+++++|...  .+.+|.
T Consensus       182 L~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~  259 (350)
T 1rdq_E          182 VTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPS  259 (350)
T ss_dssp             ECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCT
T ss_pred             EcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCC
Confidence            999999986543221    111211      122233343            37999999999999999874  456665


Q ss_pred             CCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCCCCCCC
Q psy17600        142 EVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDDFPDVK  217 (351)
Q Consensus       142 ~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~~~~~~  217 (351)
                      .  ++++++++|.+++ .+|.+|++.. .++++++   .||||+++||+.+.++.  +|+.|.+.+..|+++||++++..
T Consensus       260 ~--~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~---~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~~~~~~~  334 (350)
T 1rdq_E          260 H--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK---NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE  334 (350)
T ss_dssp             T--CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCCCCCC
T ss_pred             C--CCHHHHHHHHHHhhcCHHhccCCccCCHHHHH---hCcCcCCCCHHHHhhccCCCCCCCCCCCcccccccccccccc
Confidence            4  7999999999955 7999999964 5688888   88999999999997664  45556788999999999887654


Q ss_pred             C
Q psy17600        218 L  218 (351)
Q Consensus       218 ~  218 (351)
                      .
T Consensus       335 ~  335 (350)
T 1rdq_E          335 I  335 (350)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.97  E-value=3e-30  Score=246.43  Aligned_cols=172  Identities=24%  Similarity=0.361  Sum_probs=138.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.+ +.+++.+++.|+.||+.||+|||++|||||||||+|||++.+|++|
T Consensus       132 nIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vK  210 (346)
T 4fih_A          132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK  210 (346)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEE
Confidence            567788899999999999999999999999876 5699999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--cccccccCC-----------CCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH--RTDFYRDLS-----------QAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~--~~~~~~~~~-----------~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+.+....  .+..+++..           +....|+|            .+||.+.+..+++..|.... ...
T Consensus       211 l~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~  289 (346)
T 4fih_A          211 LSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPR  289 (346)
T ss_dssp             ECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-CCC
T ss_pred             EecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCC
Confidence            99999998654321  222223322           33334433            79999999999999887632 222


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ++....+|++++|+|.+ |..||.+|++    ++++.   .||||+.
T Consensus       290 ~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~l---~Hp~~~~  329 (346)
T 4fih_A          290 LKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELL---KHPFLAK  329 (346)
T ss_dssp             CSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHT---TCGGGGG
T ss_pred             CCccccCCHHHHHHHHHHcCCChhHCcC----HHHHh---cCHhhcC
Confidence            33333589999999999 5589999986    56777   8999974

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=1.3e-29  Score=242.33  Aligned_cols=205  Identities=28%  Similarity=0.552  Sum_probs=161.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|..++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|++|
T Consensus        71 ~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  150 (345)
T 3a8x_A           71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK  150 (345)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             ccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEE
Confidence            56777888999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--Cc-----cccccc------CCCCCCccc------------CCCCCCC---------CCHHHHHHH
Q psy17600         84 LSDFGLCTGLKKS--HR-----TDFYRD------LSQAKPSDF------------SYPPFCS---------ENPQETYRK  129 (351)
Q Consensus        84 l~DFGla~~~~~~--~~-----~~~~~~------~~~~~~~~~------------~~~Pf~~---------~~~~~~~~~  129 (351)
                      |+|||+|+.....  ..     +..|..      ..+....|+            +.+||..         .+...+++.
T Consensus       151 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  230 (345)
T 3a8x_A          151 LTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  230 (345)
T ss_dssp             ECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH
T ss_pred             EEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH
Confidence            9999999753211  11     112211      122233343            2689975         344566777


Q ss_pred             HHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCC
Q psy17600        130 VMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSI  204 (351)
Q Consensus       130 i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~  204 (351)
                      +..  ..+.+|..  +|++++++|.++ ..+|.+|++..  .|.++++   .||||+++||+.+.++.  +|+.|.+.+.
T Consensus       231 i~~--~~~~~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~---~hp~f~~~~w~~~~~~~~~~p~~p~~~~~  303 (345)
T 3a8x_A          231 ILE--KQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ---GHPFFRNVDWDMMEQKQVVPPFKPNISGE  303 (345)
T ss_dssp             HHH--CCCCCCTT--SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCTT
T ss_pred             HHc--CCCCCCCC--CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHh---cCCccCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            775  34566654  799999999995 47999999974  4567887   89999999999997764  4455678888


Q ss_pred             CcCCCCCC-CCC
Q psy17600        205 DDTSNFDD-FPD  215 (351)
Q Consensus       205 ~d~~~f~~-~~~  215 (351)
                      .|++||+. +++
T Consensus       304 ~~~~~~~~~~~~  315 (345)
T 3a8x_A          304 FGLDNFDSQFTN  315 (345)
T ss_dssp             TCGGGSCHHHHT
T ss_pred             chhhhcCccccc
Confidence            99999985 443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.96  E-value=5.9e-30  Score=237.39  Aligned_cols=168  Identities=21%  Similarity=0.364  Sum_probs=133.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++-.|++...+||||||| +|+|.+++.+.+.+++.+++.++.|++.||+|||++|||||||||+|||++.+|++|
T Consensus        74 nIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vk  152 (275)
T 3hyh_A           74 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVK  152 (275)
T ss_dssp             TBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEE
T ss_pred             CCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEE
Confidence            4567778899999999999999 789999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-ccccccCCCC------------CCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-TDFYRDLSQA------------KPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-~~~~~~~~~~------------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+....... +...+++.|.            ...|+            +.+||.+.+..+++++|...  .+.
T Consensus       153 l~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~  230 (275)
T 3hyh_A          153 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYT  230 (275)
T ss_dssp             ECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCC
T ss_pred             EeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC
Confidence            999999986543221 1222222222            23343            27999999999999999874  456


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      +|..  +|++++++|.+ |..||.+|++    ++++.   .||||+
T Consensus       231 ~p~~--~s~~~~~li~~~L~~dP~~R~s----~~eil---~hpw~k  267 (275)
T 3hyh_A          231 LPKF--LSPGAAGLIKRMLIVNPLNRIS----IHEIM---QDDWFK  267 (275)
T ss_dssp             CCTT--SCHHHHHHHHHHSCSSGGGSCC----HHHHH---HCHHHH
T ss_pred             CCCC--CCHHHHHHHHHHccCChhHCcC----HHHHH---cCcccc
Confidence            6654  89999999999 5579999985    67787   789996

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=2.3e-30  Score=249.23  Aligned_cols=89  Identities=28%  Similarity=0.491  Sum_probs=81.8

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-Cc
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GH   81 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~   81 (351)
                      .+++.++..|++..++|||||||+||+|.+++   +.+++.+++.|+.|++.||+|||++|||||||||+|||++.+ +.
T Consensus        80 ~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~  156 (361)
T 4f9c_A           80 DNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK  156 (361)
T ss_dssp             TTBCCCSEEEEETTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE
T ss_pred             CCCceEEEEEEECCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCe
Confidence            35677788999999999999999999999998   359999999999999999999999999999999999999876 89


Q ss_pred             EEEEecCccccCc
Q psy17600         82 IKLSDFGLCTGLK   94 (351)
Q Consensus        82 ~kl~DFGla~~~~   94 (351)
                      +||+|||+|+...
T Consensus       157 ~kl~DFGla~~~~  169 (361)
T 4f9c_A          157 YALVDFGLAQGTH  169 (361)
T ss_dssp             EEECCCTTCEECT
T ss_pred             EEECcCCCCcccC
Confidence            9999999997553

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=2.1e-29  Score=246.38  Aligned_cols=172  Identities=24%  Similarity=0.364  Sum_probs=139.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.. +.+++.+++.|+.||+.||+|||++|||||||||+|||++.+|++|
T Consensus       209 nIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vK  287 (423)
T 4fie_A          209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK  287 (423)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEE
T ss_pred             CCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEE
Confidence            567788899999999999999999999999865 5699999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCC--CcccccccCCC-----------CCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKS--HRTDFYRDLSQ-----------AKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~--~~~~~~~~~~~-----------~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+.+...  ..+.++++..|           ....|+|            .+||.+.+..+.+..|.... ...
T Consensus       288 l~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~  366 (423)
T 4fie_A          288 LSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPR  366 (423)
T ss_dssp             ECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCC
T ss_pred             EecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCC
Confidence            9999999866432  12233333333           3334432            79999999999999887632 223


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ++....+|+++++||.+ |..||.+|++    ++++.   .||||+.
T Consensus       367 ~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~ell---~Hp~~~~  406 (423)
T 4fie_A          367 LKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELL---KHPFLAK  406 (423)
T ss_dssp             CSCTTSSCHHHHHHHHHHSCSSTTTSCC----HHHHT---TCGGGGG
T ss_pred             CcccccCCHHHHHHHHHHcCCChhHCcC----HHHHh---cCHHhcC
Confidence            33334589999999999 5589999986    56777   8999974

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.96  E-value=2.2e-30  Score=243.24  Aligned_cols=77  Identities=26%  Similarity=0.510  Sum_probs=68.4

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTL---SEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l---~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      .+|||||||+||+|.+++.....+   ++..++.++.|++.||+|||++|||||||||+|||++.+|.+||+|||+|+.+
T Consensus        89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~  168 (299)
T 4g31_A           89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM  168 (299)
T ss_dssp             EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceec
Confidence            489999999999999999876554   45668889999999999999999999999999999999999999999998754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=2.2e-29  Score=240.84  Aligned_cols=171  Identities=20%  Similarity=0.308  Sum_probs=137.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++.++..|++...+|||||||+||+|.++|...  ..++|..++.|+.||+.||.|||++|||||||||+|||++.+|+
T Consensus        84 nIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~  163 (350)
T 4b9d_A           84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT  163 (350)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCC
T ss_pred             CCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCC
Confidence            5677788899999999999999999999999754  35799999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCC--cccccccCCC-----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         82 IKLSDFGLCTGLKKSH--RTDFYRDLSQ-----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~--~~~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      +||+|||+|+.+....  .+..+++..|           ....|+            +.+||.+.+..+++.+|..... 
T Consensus       164 vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-  242 (350)
T 4b9d_A          164 VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-  242 (350)
T ss_dssp             EEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-
T ss_pred             EEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-
Confidence            9999999998764321  1112233333           233343            2799999999999999987532 


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .  |....+|++++++|.+ |..||.+|.+    ++++.   .||||+.
T Consensus       243 ~--~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l---~hp~~~~  282 (350)
T 4b9d_A          243 P--PVSLHYSYDLRSLVSQLFKRNPRDRPS----VNSIL---EKGFIAK  282 (350)
T ss_dssp             C--CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHH---TSHHHHT
T ss_pred             C--CCCccCCHHHHHHHHHHccCChhHCcC----HHHHh---cCHHhhc
Confidence            1  2223589999999999 5589999985    67777   8899974

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=8.1e-30  Score=240.03  Aligned_cols=85  Identities=25%  Similarity=0.336  Sum_probs=77.2

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      .++.+.+..++|||||||+||+|.++|... ..+++.++..++.||+.||.|||+++||||||||+|||++.++.+||+|
T Consensus        96 ~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~D  175 (307)
T 3omv_A           96 LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGD  175 (307)
T ss_dssp             CEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECC
T ss_pred             eEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEee
Confidence            334456677899999999999999999754 5799999999999999999999999999999999999999999999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||+|+.
T Consensus       176 FGla~~  181 (307)
T 3omv_A          176 FGLATV  181 (307)
T ss_dssp             CSSCBC
T ss_pred             ccCcee
Confidence            999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=1e-28  Score=230.77  Aligned_cols=172  Identities=22%  Similarity=0.312  Sum_probs=133.7

Q ss_pred             ceEeeeEEEec----CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEec
Q psy17600          4 YACLKQLRMSD----PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLD   77 (351)
Q Consensus         4 ~~~~~~~~f~~----~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~   77 (351)
                      +++.++..|++    ...+|||||||+||+|.+++.+.+.+++..++.++.||+.||.|||+++  ||||||||+|||++
T Consensus        86 nIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~  165 (290)
T 3fpq_A           86 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT  165 (290)
T ss_dssp             TBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES
T ss_pred             CCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE
Confidence            34556666665    4569999999999999999998889999999999999999999999998  99999999999997


Q ss_pred             C-CCcEEEEecCccccCcCCCcccccccCCCCCCc----------cc------------CCCCCCCC-CHHHHHHHHHcC
Q psy17600         78 A-RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS----------DF------------SYPPFCSE-NPQETYRKVMSW  133 (351)
Q Consensus        78 ~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~----------~~------------~~~Pf~~~-~~~~~~~~i~~~  133 (351)
                      . +|.+||+|||+|+.......+...+++.|..|+          |+            +.+||.+. +...+++.+...
T Consensus       166 ~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~  245 (290)
T 3fpq_A          166 GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG  245 (290)
T ss_dssp             STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred             CCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC
Confidence            4 799999999999865444333344444444443          22            26899764 566677777764


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .....+|.  ..+++++++|.+ |..||.+|.+    ++++.   .||||++
T Consensus       246 ~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~s----~~e~l---~Hp~~~~  288 (290)
T 3fpq_A          246 VKPASFDK--VAIPEVKEIIEGCIRQNKDERYS----IKDLL---NHAFFQE  288 (290)
T ss_dssp             CCCGGGGG--CCCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGC-
T ss_pred             CCCCCCCc--cCCHHHHHHHHHHccCChhHCcC----HHHHh---cCccccC
Confidence            43333443  378999999999 5579999985    66777   8899974

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=9.3e-30  Score=238.95  Aligned_cols=89  Identities=19%  Similarity=0.285  Sum_probs=82.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-------------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIK   70 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlk   70 (351)
                      +++.++..+.+...+|||||||+||+|.++|.+.             ..+++.++..++.||+.||.|||+++|||||||
T Consensus        76 nIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlK  155 (299)
T 4asz_A           76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA  155 (299)
T ss_dssp             TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccC
Confidence            4567777889999999999999999999999764             368999999999999999999999999999999


Q ss_pred             CCcEEecCCCcEEEEecCcccc
Q psy17600         71 PDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~~   92 (351)
                      |+|||++.++.+||+|||+|+.
T Consensus       156 p~NILl~~~~~~Ki~DFGla~~  177 (299)
T 4asz_A          156 TRNCLVGENLLVKIGDFGMSRD  177 (299)
T ss_dssp             GGGEEECGGGCEEECCCSCHHH
T ss_pred             HhhEEECCCCcEEECCccccee
Confidence            9999999999999999999853

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=3.2e-28  Score=240.07  Aligned_cols=204  Identities=29%  Similarity=0.545  Sum_probs=162.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..|++...+|+|||||+||+|..++.+...+++..++.++.|++.||.|||+ +||+||||||+|||++.++.+
T Consensus       209 ~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~  288 (446)
T 4ejn_A          209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI  288 (446)
T ss_dssp             TSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCE
T ss_pred             eEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCE
Confidence            3456677899999999999999999999999888889999999999999999999998 999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      ||+|||+|+......       .+..|..      ..+....|+            +.+||.+.+....+..+..  ..+
T Consensus       289 kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~  366 (446)
T 4ejn_A          289 KITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEI  366 (446)
T ss_dssp             EECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCC
T ss_pred             EEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh--CCC
Confidence            999999997532211       1122221      112222332            3789999999999999886  345


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC-
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD-  212 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~-  212 (351)
                      .+|..  ++++++++|.++ ..+|.+|+++. ..++++.   .||||++++|+.+.++.  +|+.|.+.+..|+++||+ 
T Consensus       367 ~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell---~hp~f~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~  441 (446)
T 4ejn_A          367 RFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIM---QHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEE  441 (446)
T ss_dssp             CCCTT--SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCSCSSTTCCTTC---
T ss_pred             CCCcc--CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHH---hCccccCCCHHHHhhCcCCCCccCCCCCccchhhcchh
Confidence            56654  789999999994 57999999864 4677887   88999999999997775  445567889999999985 


Q ss_pred             CC
Q psy17600        213 FP  214 (351)
Q Consensus       213 ~~  214 (351)
                      |+
T Consensus       442 ~~  443 (446)
T 4ejn_A          442 FT  443 (446)
T ss_dssp             --
T ss_pred             hh
Confidence            44

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=7e-29  Score=236.00  Aligned_cols=89  Identities=20%  Similarity=0.280  Sum_probs=78.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK---------------DTLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      +++.++..+.+...+|||||||+||+|.+++.+.               +.+++.++..++.||+.||.|||+++|||||
T Consensus       104 nIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD  183 (329)
T 4aoj_A          104 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD  183 (329)
T ss_dssp             TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence            4567777888999999999999999999999753               3589999999999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCcccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |||+|||++.++.+||+|||+|+.
T Consensus       184 LKp~NILl~~~~~~Ki~DFGla~~  207 (329)
T 4aoj_A          184 LATRNCLVGQGLVVKIGDFGMSRD  207 (329)
T ss_dssp             CCGGGEEEETTTEEEECCCC----
T ss_pred             ccHhhEEECCCCcEEEccccccee
Confidence            999999999999999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=1.8e-27  Score=240.45  Aligned_cols=188  Identities=22%  Similarity=0.471  Sum_probs=150.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      +++.++..|++...+|+|||||+||+|..++.+.    ..+++..++.|+.||+.||.|||++||+||||||+|||++.+
T Consensus       246 ~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~  325 (543)
T 3c4z_A          246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD  325 (543)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             CEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC
Confidence            5667788899999999999999999999999764    369999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCccccCcCCCc--ccccccCCC-----------CCCccc------------CCCCCCCC----CHHHHHHHH
Q psy17600         80 GHIKLSDFGLCTGLKKSHR--TDFYRDLSQ-----------AKPSDF------------SYPPFCSE----NPQETYRKV  130 (351)
Q Consensus        80 ~~~kl~DFGla~~~~~~~~--~~~~~~~~~-----------~~~~~~------------~~~Pf~~~----~~~~~~~~i  130 (351)
                      |++||+|||+++.+.....  ....++..|           ....|+            +.+||.+.    +..++++.+
T Consensus       326 g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i  405 (543)
T 3c4z_A          326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV  405 (543)
T ss_dssp             SCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH
T ss_pred             CCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH
Confidence            9999999999986543221  111222222           223343            26899875    456778888


Q ss_pred             HcCCCceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        131 MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       131 ~~~~~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      ..  ....+|..  +|++++++|.+++ .+|.+|++... ++++++   .||||++++|+.+..+...+|
T Consensus       406 ~~--~~~~~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~---~Hpff~~i~w~~l~~~~~~pp  468 (543)
T 3c4z_A          406 LE--QAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLR---THPLFRDISWRQLEAGMLTPP  468 (543)
T ss_dssp             HH--CCCCCCTT--SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH---TSGGGTTCCHHHHHTTCSCCS
T ss_pred             hh--cccCCCcc--cCHHHHHHHHHhccCCHhHCCCCcccCHHHHH---cCccccCCCHHHHHcCCCCCC
Confidence            75  34566654  7999999999955 79999999864 678888   889999999999987754444

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.95  E-value=1.4e-27  Score=226.09  Aligned_cols=202  Identities=32%  Similarity=0.626  Sum_probs=149.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||+||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus        82 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~k  161 (327)
T 3a62_A           82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVK  161 (327)
T ss_dssp             TBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEE
T ss_pred             CccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEE
Confidence            45566778999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+++......       .+..|..      ..+....|+            +.+||.+.+..+.+..+...  .+.
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~  239 (327)
T 3a62_A          162 LTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC--KLN  239 (327)
T ss_dssp             ECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCC
T ss_pred             EEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCC
Confidence            99999987532211       1111211      112222332            37999999999999988864  445


Q ss_pred             CCCCCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCC--CCCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERP--AAIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~--~~~~~~~~~~~d~~~f~~  212 (351)
                      +|+.  ++++++++|.+++ .+|.+|++.. .+++++.   .||||++++|+.+..+.  +++.|.+.+..|.++|+.
T Consensus       240 ~p~~--~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l---~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~  312 (327)
T 3a62_A          240 LPPY--LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ---AHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS  312 (327)
T ss_dssp             CCTT--SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHH---HSGGGSSCCHHHHHTTCSCCSCCCC------------
T ss_pred             CCCC--CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHH---cCCcccCCCHHHHhhccCCCCCCCCcCChhhhhhcch
Confidence            5653  7899999999954 7999999875 4677887   88999999999997765  444566788889998874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=9.1e-29  Score=233.15  Aligned_cols=89  Identities=19%  Similarity=0.315  Sum_probs=81.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      +++.++..+.+...+|||||||+||+|.++|...                ..+++.++..++.||+.||.|||+++||||
T Consensus        90 NIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR  169 (308)
T 4gt4_A           90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK  169 (308)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4566777788899999999999999999999653                358899999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+|||++.++.+||+|||+|+.
T Consensus       170 DLK~~NILl~~~~~~Ki~DFGlar~  194 (308)
T 4gt4_A          170 DLATRNVLVYDKLNVKISDLGLFRE  194 (308)
T ss_dssp             CCSGGGEEECGGGCEEECCSCCBCG
T ss_pred             CccccceEECCCCCEEECCccccee
Confidence            9999999999999999999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=1.6e-27  Score=241.92  Aligned_cols=188  Identities=23%  Similarity=0.405  Sum_probs=148.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++.++..|++...+|+|||||+||+|..++...+  .+++..++.|+.||+.||+|||++|||||||||+|||++.+|+
T Consensus       245 ~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~  324 (576)
T 2acx_A          245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH  324 (576)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             CEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCC
Confidence            56677888999999999999999999999998654  3999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCC----CHHHHHHHHHcC
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSE----NPQETYRKVMSW  133 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~----~~~~~~~~i~~~  133 (351)
                      +||+|||+|+.......      +..|..+      .+....|+            +.+||.+.    ....+++.+.. 
T Consensus       325 vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-  403 (576)
T 2acx_A          325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-  403 (576)
T ss_dssp             EEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-
T ss_pred             eEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-
Confidence            99999999986643321      1222211      12233343            26899876    34667777765 


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCC-ChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFC-SECDRRLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~-~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                       ....+|.  .+|++++++|.+++ .+|.+|+|... ++++++   .||||+++||+.+..+...+|
T Consensus       404 -~~~~~p~--~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil---~HpfF~~i~w~~l~~~~~~pp  464 (576)
T 2acx_A          404 -VPEEYSE--RFSPQARSLCSQLLCKDPAERLGCRGGSAREVK---EHPLFKKLNFKRLGAGMLEPP  464 (576)
T ss_dssp             -CCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHH---TSGGGTTCCHHHHHTTCSCCS
T ss_pred             -ccccCCc--cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHH---hChhhccCCHHHHhcCCCCCC
Confidence             3445554  48999999999955 79999998753 578888   889999999999987754444

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.95  E-value=1.4e-28  Score=235.99  Aligned_cols=89  Identities=28%  Similarity=0.369  Sum_probs=78.1

Q ss_pred             eEeeeEEEec-CCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          5 ACLKQLRMSD-PINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         5 ~~~~~~~f~~-~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      ++.++..+.+ ...+|||||||+||+|.++|++.                ..+++..+..++.||+.||+|||+++||||
T Consensus       130 IV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHR  209 (353)
T 4ase_A          130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR  209 (353)
T ss_dssp             BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecC
Confidence            4555655644 56799999999999999999753                347899999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCccccC
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ||||+|||++.++.+||+|||+|+.+
T Consensus       210 DLK~~NILl~~~~~vKi~DFGlar~~  235 (353)
T 4ase_A          210 DLAARNILLSEKNVVKICDFGLARDI  235 (353)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             ccCccceeeCCCCCEEECcchhhhhc
Confidence            99999999999999999999998643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.94  E-value=2.9e-27  Score=240.58  Aligned_cols=181  Identities=21%  Similarity=0.348  Sum_probs=145.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC--C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR--G   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~--~   80 (351)
                      +++.++..|++...+|||||||+||+|.++|.+ .+.+++.+++.|+.||+.||.|||++||+||||||+|||++.+  +
T Consensus       215 nIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~  294 (573)
T 3uto_A          215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN  294 (573)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred             CCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCC
Confidence            467788899999999999999999999999864 4679999999999999999999999999999999999999854  8


Q ss_pred             cEEEEecCccccCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+|+.+.....      |..|..      ..+....|+            +.+||.+.+..+++.+|......
T Consensus       295 ~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~  374 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN  374 (573)
T ss_dssp             CEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC
Confidence            999999999987654332      222221      122333343            37999999999999999975433


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhh
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR  191 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~  191 (351)
                      +..+....+|++++|||.+ |..||.+|++    ++++.   .||||+..+|....
T Consensus       375 ~~~~~~~~~s~~~~dli~~~L~~dp~~R~t----~~e~l---~Hpw~~~~~~~~~~  423 (573)
T 3uto_A          375 MDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQAL---EHPWLTPGNAPGRD  423 (573)
T ss_dssp             CCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---HSTTTSCCCCTTTT
T ss_pred             CCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHh---cCcCcCCCCCCCch
Confidence            3333334589999999999 5579999996    66777   78999999997643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.94  E-value=3.5e-26  Score=221.81  Aligned_cols=187  Identities=21%  Similarity=0.466  Sum_probs=148.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||.||+|..++.+...+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus        76 ~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vk  155 (384)
T 4fr4_A           76 FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVH  155 (384)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             CCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEE
Confidence            56677889999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc------ccccccCC---------CCCCccc------------CCCCCCC---CCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSHR------TDFYRDLS---------QAKPSDF------------SYPPFCS---ENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~------~~~~~~~~---------~~~~~~~------------~~~Pf~~---~~~~~~~~~i~~~  133 (351)
                      |+|||+++.+.....      +..|..+.         +....|+            +.+||..   .+..+.+..+.. 
T Consensus       156 L~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-  234 (384)
T 4fr4_A          156 ITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET-  234 (384)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH-
T ss_pred             EeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh-
Confidence            999999986543221      22222221         2223343            2689974   344556666654 


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCCcc
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQ  200 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~~~  200 (351)
                       ....+|..  +|+++.++|.+++ .+|.+|++.   +++++   .||||+++||+.+..+...+|+.
T Consensus       235 -~~~~~p~~--~s~~~~~li~~lL~~dP~~R~s~---~~~l~---~hp~f~~~~w~~~~~~~~~p~~~  293 (384)
T 4fr4_A          235 -TVVTYPSA--WSQEMVSLLKKLLEPNPDQRFSQ---LSDVQ---NFPYMNDINWDAVFQKRLIPGFI  293 (384)
T ss_dssp             -CCCCCCTT--SCHHHHHHHHHHSCSSGGGSCCS---HHHHH---TSGGGTTCCHHHHHTTCSCCCCC
T ss_pred             -cccCCCCc--CCHHHHHHHHHHhcCCHhHhccc---HHHHH---cChhhhcCCHHHHHhCCCCCCCC
Confidence             34556654  7899999999955 799999974   56777   89999999999998886655543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=1.2e-27  Score=224.96  Aligned_cols=87  Identities=22%  Similarity=0.319  Sum_probs=75.4

Q ss_pred             eEeeeEEEecC----CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeccCCCC
Q psy17600          5 ACLKQLRMSDP----INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------GFIHRDIKPD   72 (351)
Q Consensus         5 ~~~~~~~f~~~----~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~--------~iihrDlkp~   72 (351)
                      ++.++..+.+.    ..+|||||||+||+|.++|.+. .++++.+..++.|++.||.|||++        +||||||||+
T Consensus        59 Iv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~  137 (303)
T 3hmm_A           59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK  137 (303)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGG
T ss_pred             CCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcc
Confidence            34444444443    2689999999999999999764 688999999999999999999987        9999999999


Q ss_pred             cEEecCCCcEEEEecCcccc
Q psy17600         73 NLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        73 Nill~~~~~~kl~DFGla~~   92 (351)
                      |||++.++.+||+|||+|+.
T Consensus       138 NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A          138 NILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             GEEECTTSCEEECCCTTCEE
T ss_pred             cEEECCCCCEEEEeCCCCcc
Confidence            99999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.94  E-value=2.5e-26  Score=223.80  Aligned_cols=168  Identities=21%  Similarity=0.364  Sum_probs=128.9

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |++...+|||||||. |+|.+++.+.+.+++.+++.|+.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+
T Consensus       128 ~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          128 YGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             TTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             cccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceee
Confidence            345578999999995 7899999988899999999999999999999999999999999999999999999999999998


Q ss_pred             cCcCC-----------CcccccccC-------CCCCCcccC------------CCCCCCCCHHHHHHHHHcCCCcee---
Q psy17600         92 GLKKS-----------HRTDFYRDL-------SQAKPSDFS------------YPPFCSENPQETYRKVMSWRDTLV---  138 (351)
Q Consensus        92 ~~~~~-----------~~~~~~~~~-------~~~~~~~~~------------~~Pf~~~~~~~~~~~i~~~~~~~~---  138 (351)
                      .+...           ..|..|..+       .+....|+|            .+||.+.+..+.+..|....+...   
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~  286 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV  286 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence            65321           112223221       122333432            799999999999888875322211   


Q ss_pred             ---------------CCCC---------CCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        139 ---------------FPPE---------VPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       139 ---------------~p~~---------~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                                     +|..         ..+|++++|||.+ |..||.+|++    ++++.   .||||+....
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L---~Hp~f~~~~~  353 (398)
T 4b99_A          287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS----AAAAL---RHPFLAKYHD  353 (398)
T ss_dssp             TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHHHT---TSGGGTTTCC
T ss_pred             hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC----HHHHh---cCHhhCcCCC
Confidence                           1211         1368999999999 4579999996    56777   8999987644

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.3e-25  Score=214.94  Aligned_cols=200  Identities=30%  Similarity=0.594  Sum_probs=149.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..+++...+|+|||||+||+|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus       120 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k  199 (355)
T 1vzo_A          120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV  199 (355)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             ceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEE
Confidence            45566778899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc---ccccccCCCC-------------CCccc------------CCCCCCCC----CHHHHHHHHH
Q psy17600         84 LSDFGLCTGLKKSHR---TDFYRDLSQA-------------KPSDF------------SYPPFCSE----NPQETYRKVM  131 (351)
Q Consensus        84 l~DFGla~~~~~~~~---~~~~~~~~~~-------------~~~~~------------~~~Pf~~~----~~~~~~~~i~  131 (351)
                      |+|||+++.......   ....++..+.             ...|.            +..||...    ....+.+.+.
T Consensus       200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  279 (355)
T 1vzo_A          200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL  279 (355)
T ss_dssp             ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred             EeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh
Confidence            999999875432111   1111222221             12222            26788643    3445555555


Q ss_pred             cCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCC--CCcccCCCCcC
Q psy17600        132 SWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAA--IPVQVKSIDDT  207 (351)
Q Consensus       132 ~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~--~~~~~~~~~d~  207 (351)
                      ..  ...+|.  .+++.++++|.+ |..+|.+|++.. ..++++.   .||||++++|+.+..++.+  +.+.+++..|.
T Consensus       280 ~~--~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell---~h~~f~~~~~~~l~~~~~~~p~~p~~~~~~d~  352 (355)
T 1vzo_A          280 KS--EPPYPQ--EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK---EHLFFQKINWDDLAAKKVPAPFKPVIRDELDV  352 (355)
T ss_dssp             HC--CCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCC-CCC
T ss_pred             cc--CCCCCc--ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHH---cCcchhcCChhHhhhccCCCCCCCcccccccc
Confidence            42  234444  378999999999 457999999764 4677777   8899999999999877654  44567777777


Q ss_pred             CCC
Q psy17600        208 SNF  210 (351)
Q Consensus       208 ~~f  210 (351)
                      +||
T Consensus       353 ~~~  355 (355)
T 1vzo_A          353 SNF  355 (355)
T ss_dssp             ---
T ss_pred             ccC
Confidence            776

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.92  E-value=1.2e-24  Score=209.28  Aligned_cols=181  Identities=26%  Similarity=0.398  Sum_probs=144.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---   80 (351)
                      +++.++..|++...+|+|||||+||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.++   
T Consensus        76 nIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~  155 (361)
T 2yab_A           76 NIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI  155 (361)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSS
T ss_pred             CCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCc
Confidence            45566778999999999999999999999998888899999999999999999999999999999999999998777   


Q ss_pred             -cEEEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC
Q psy17600         81 -HIKLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        81 -~~kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                       .+||+|||+++.......      +..|..+      .+....|+            +.+||.+.+..+++..|.... 
T Consensus       156 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-  234 (361)
T 2yab_A          156 PHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVS-  234 (361)
T ss_dssp             CCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC-
T ss_pred             cCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-
Confidence             799999999976543221      1222211      12222332            379999999999999998743 


Q ss_pred             ceeCCCC--CCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        136 TLVFPPE--VPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       136 ~~~~p~~--~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                       ..++..  ..+|++++++|.+++ .+|.+|++    ++++.   .||||++++|.....+
T Consensus       235 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~~~~~~~~~~~~~  287 (361)
T 2yab_A          235 -YDFDEEFFSQTSELAKDFIRKLLVKETRKRLT----IQEAL---RHPWITPVDTQQAMVR  287 (361)
T ss_dssp             -CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHH---TSTTTSCSSHHHHHHH
T ss_pred             -CCCCchhccCCCHHHHHHHHHHCCCChhHCcC----HHHHh---cCcCcCCCchhhhhhc
Confidence             333322  347999999999954 79999987    56777   8999999999876543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.92  E-value=3.4e-25  Score=212.31  Aligned_cols=89  Identities=19%  Similarity=0.247  Sum_probs=80.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      ..+..+..+.+...+|||||||+||+|.+++..     ...+++..+..++.|++.||+|||++|||||||||+|||++.
T Consensus       128 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          128 MFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN  207 (365)
T ss_dssp             GBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECG
T ss_pred             hhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecc
Confidence            345566778888999999999999999999973     457999999999999999999999999999999999999998


Q ss_pred             -----------CCcEEEEecCcccc
Q psy17600         79 -----------RGHIKLSDFGLCTG   92 (351)
Q Consensus        79 -----------~~~~kl~DFGla~~   92 (351)
                                 ++.+||+|||+|+.
T Consensus       208 ~~~~~~~~~~~~~~~kl~DFG~a~~  232 (365)
T 3e7e_A          208 GFLEQDDEDDLSAGLALIDLGQSID  232 (365)
T ss_dssp             GGTCC------CTTEEECCCTTCEE
T ss_pred             cccCccccccccCCEEEeeCchhhh
Confidence                       89999999999864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.91  E-value=1.6e-25  Score=227.61  Aligned_cols=85  Identities=28%  Similarity=0.443  Sum_probs=78.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+.++..|++...+|||||||+||+|.++|.+.+.+++.   .++.||+.||+|+|++|||||||||+|||++.+|.+||
T Consensus       304 i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL  380 (569)
T 4azs_A          304 APAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARL  380 (569)
T ss_dssp             CCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEE
T ss_pred             eeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEE
Confidence            455677899999999999999999999999988888775   47889999999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+|+.
T Consensus       381 ~DFGlAr~  388 (569)
T 4azs_A          381 IDFGSIVT  388 (569)
T ss_dssp             CCCTTEES
T ss_pred             eecccCee
Confidence            99999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.90  E-value=3.1e-23  Score=196.66  Aligned_cols=173  Identities=23%  Similarity=0.328  Sum_probs=138.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..+++...+|+|||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        75 nIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~k  154 (328)
T 3fe3_A           75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIK  154 (328)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             CEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEE
Confidence            34556677889999999999999999999998888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc------ccccccCC------C-CCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR------TDFYRDLS------Q-AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~------~~~~~~~~------~-~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++........      +..|..+.      + ....|.            +.+||.+.+..+....+...  ...
T Consensus       155 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~  232 (328)
T 3fe3_A          155 IADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--KYR  232 (328)
T ss_dssp             ECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC
T ss_pred             EeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCC
Confidence            999999975543221      12222111      1 112232            37999999999999999874  344


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      +|.  .+|+++.++|.+ |..+|.+|.+    ++++.   .||||+...+
T Consensus       233 ~p~--~~s~~~~~li~~~L~~dP~~R~t----~~eil---~h~~~~~~~~  273 (328)
T 3fe3_A          233 IPF--YMSTDCENLLKRFLVLNPIKRGT----LEQIM---KDRWINAGHE  273 (328)
T ss_dssp             CCT--TSCHHHHHHHHHHCCSSTTTSCC----HHHHT---TCTTTTTTCT
T ss_pred             CCC--CCCHHHHHHHHHHCCCChhHCcC----HHHHh---cCHhhcCCCc
Confidence            554  379999999999 4579999986    56776   8899986543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.90  E-value=5.9e-24  Score=197.88  Aligned_cols=88  Identities=25%  Similarity=0.439  Sum_probs=81.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+++...+|+|||||+||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        73 iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl  152 (294)
T 4eqm_A           73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKI  152 (294)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             CceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            45566678889999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+++.
T Consensus       153 ~Dfg~~~~  160 (294)
T 4eqm_A          153 FDFGIAKA  160 (294)
T ss_dssp             CCCSSSTT
T ss_pred             EeCCCccc
Confidence            99999753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.90  E-value=7e-24  Score=197.80  Aligned_cols=88  Identities=31%  Similarity=0.495  Sum_probs=80.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|.+...+|+|||||.||+|.+++.+. .+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        78 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~k  156 (297)
T 3fxz_A           78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK  156 (297)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEE
Confidence            3455666788999999999999999999999764 699999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       157 l~Dfg~~~~  165 (297)
T 3fxz_A          157 LTDFGFCAQ  165 (297)
T ss_dssp             ECCCTTCEE
T ss_pred             EeeCCCcee
Confidence            999999753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.90  E-value=3.6e-23  Score=197.34  Aligned_cols=183  Identities=20%  Similarity=0.381  Sum_probs=139.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC----
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR----   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~----   79 (351)
                      +++..+..|++...+|+|||||.||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+|||+...    
T Consensus        77 ~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~  156 (342)
T 2qr7_A           77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNP  156 (342)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSG
T ss_pred             CcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCc
Confidence            4566677899999999999999999999999988889999999999999999999999999999999999998433    


Q ss_pred             CcEEEEecCccccCcCCCc--ccccccCCCCCC-----------ccc------------CCCCCCC---CCHHHHHHHHH
Q psy17600         80 GHIKLSDFGLCTGLKKSHR--TDFYRDLSQAKP-----------SDF------------SYPPFCS---ENPQETYRKVM  131 (351)
Q Consensus        80 ~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~~-----------~~~------------~~~Pf~~---~~~~~~~~~i~  131 (351)
                      +.+||+|||+++.......  .....+..+..|           .|+            +.+||.+   .+..+++..|.
T Consensus       157 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~  236 (342)
T 2qr7_A          157 ESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG  236 (342)
T ss_dssp             GGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH
T ss_pred             CeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc
Confidence            3599999999986543221  111222333332           222            3689985   56778888888


Q ss_pred             cCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCC
Q psy17600        132 SWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPA  195 (351)
Q Consensus       132 ~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~  195 (351)
                      .....+..+....+|++++++|.++ ..+|.+|++    ++++.   .||||.  +|+.+...+.
T Consensus       237 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~~il---~hp~~~--~~~~~~~~~~  292 (342)
T 2qr7_A          237 SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVL---RHPWIV--HWDQLPQYQL  292 (342)
T ss_dssp             HCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCC----HHHHT---TSHHHH--TGGGSCCSCC
T ss_pred             cCCcccCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHh---cCCeec--CccccccccC
Confidence            7443322222235899999999995 479999997    45676   899994  6888765544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.90  E-value=5.3e-24  Score=207.32  Aligned_cols=77  Identities=30%  Similarity=0.583  Sum_probs=71.5

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---CCcEEEEecCc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---RGHIKLSDFGL   89 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---~~~~kl~DFGl   89 (351)
                      ...+|||||||.||+|.+++....  .+++..++.++.|++.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence            678999999999999999998653  5999999999999999999999999999999999999987   78999999999


Q ss_pred             cc
Q psy17600         90 CT   91 (351)
Q Consensus        90 a~   91 (351)
                      ++
T Consensus       211 a~  212 (400)
T 1nxk_A          211 AK  212 (400)
T ss_dssp             CE
T ss_pred             cc
Confidence            75

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.89  E-value=2e-23  Score=198.83  Aligned_cols=87  Identities=28%  Similarity=0.582  Sum_probs=80.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..+++...+|+||||+ +|+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        70 nIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~k  148 (336)
T 3h4j_B           70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVK  148 (336)
T ss_dssp             TBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEE
T ss_pred             CCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEE
Confidence            3456677789999999999999 789999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       149 l~DFG~s~  156 (336)
T 3h4j_B          149 IADFGLSN  156 (336)
T ss_dssp             ECCSSCTB
T ss_pred             EEEeccce
Confidence            99999974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=1.9e-22  Score=199.06  Aligned_cols=174  Identities=25%  Similarity=0.436  Sum_probs=139.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec---CCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD---ARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~---~~~   80 (351)
                      +++.++..|++...+|+|||||.||+|.+.+...+.+++..+..++.|++.||.|||++||+||||||+|||++   .++
T Consensus        71 nIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~  150 (444)
T 3soa_A           71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA  150 (444)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTC
T ss_pred             CCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCC
Confidence            34566778999999999999999999999999988999999999999999999999999999999999999998   457


Q ss_pred             cEEEEecCccccCcCCCc-------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC
Q psy17600         81 HIKLSDFGLCTGLKKSHR-------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                      .+||+|||++........       +..|..+      .+....|.            +.+||.+.+..+.+..+.....
T Consensus       151 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  230 (444)
T 3soa_A          151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY  230 (444)
T ss_dssp             CEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             cEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCC
Confidence            899999999976543221       2222221      12223332            3799999999999999987554


Q ss_pred             ceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        136 TLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ....|....+|++++++|.++ ..+|.+|..    +.++.   .||||+.
T Consensus       231 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----a~e~L---~hp~~~~  273 (444)
T 3soa_A          231 DFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEAL---KHPWISH  273 (444)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHH---HSCTTHH
T ss_pred             CCCccccccCCHHHHHHHHHHcCCChhHCCC----HHHHh---cCccccC
Confidence            444444456899999999995 479999986    56777   7899964

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=2.4e-23  Score=200.51  Aligned_cols=89  Identities=20%  Similarity=0.291  Sum_probs=80.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      +++.++..+++...+|+|||||+||+|.+++....                .+++..+..++.|++.||.|||++||+||
T Consensus       148 nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr  227 (370)
T 2psq_A          148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR  227 (370)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             CEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            45566777889999999999999999999998653                47889999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+|||++.++.+||+|||+++.
T Consensus       228 Dlkp~NIll~~~~~~kl~DFG~a~~  252 (370)
T 2psq_A          228 DLAARNVLVTENNVMKIADFGLARD  252 (370)
T ss_dssp             CCCGGGEEECTTCCEEECCCSSCEE
T ss_pred             ccchhhEEECCCCCEEEccccCCcc
Confidence            9999999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.89  E-value=4.2e-23  Score=192.94  Aligned_cols=90  Identities=19%  Similarity=0.323  Sum_probs=82.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+.+...+|+|||||+||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        68 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~  147 (310)
T 3s95_A           68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNV  147 (310)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCE
T ss_pred             CcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCE
Confidence            345566778889999999999999999999987 4678999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+++..
T Consensus       148 kl~Dfg~~~~~  158 (310)
T 3s95_A          148 VVADFGLARLM  158 (310)
T ss_dssp             EECCCTTCEEC
T ss_pred             EEeecccceec
Confidence            99999998654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.89  E-value=8.3e-23  Score=193.10  Aligned_cols=181  Identities=23%  Similarity=0.390  Sum_probs=141.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---   80 (351)
                      +++..+..|++...+|+|||||+||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++   
T Consensus        75 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~  154 (326)
T 2y0a_A           75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK  154 (326)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSS
T ss_pred             CCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCC
Confidence            34556667899999999999999999999998888899999999999999999999999999999999999998887   


Q ss_pred             -cEEEEecCccccCcCCCc-ccccccCCC-----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCC
Q psy17600         81 -HIKLSDFGLCTGLKKSHR-TDFYRDLSQ-----------AKPSDF------------SYPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        81 -~~kl~DFGla~~~~~~~~-~~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                       .+||+|||+++....... ....++..+           ....|.            +.+||.+.+..+....+.... 
T Consensus       155 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-  233 (326)
T 2y0a_A          155 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN-  233 (326)
T ss_dssp             CCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTC-
T ss_pred             CCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcC-
Confidence             899999999976542211 111122222           222232            368999999988888887643 


Q ss_pred             ceeCCCC--CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        136 TLVFPPE--VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       136 ~~~~p~~--~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                       ..++..  ..++++++++|.++ ..+|.+|.+    ++++.   .||||++.+|.....+
T Consensus       234 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l---~hp~~~~~~~~~~~~~  286 (326)
T 2y0a_A          234 -YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSL---QHPWIKPKDTQQALSR  286 (326)
T ss_dssp             -CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC----HHHHH---HSTTTSCCSHHHHHHH
T ss_pred             -CCcCccccccCCHHHHHHHHHHccCChhhCCC----HHHHh---cCCCccCCcchhhhhh
Confidence             223221  34789999999995 479999986    56777   7899999999876443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.89  E-value=2.8e-23  Score=198.41  Aligned_cols=89  Identities=28%  Similarity=0.450  Sum_probs=78.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      +++..+..|++...+|+|||||+||+|.+.+.+.    ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus        87 nIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~  166 (351)
T 3c0i_A           87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK  166 (351)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSS
T ss_pred             CCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecC
Confidence            4455667789999999999999999998877542    358999999999999999999999999999999999999866


Q ss_pred             Cc---EEEEecCcccc
Q psy17600         80 GH---IKLSDFGLCTG   92 (351)
Q Consensus        80 ~~---~kl~DFGla~~   92 (351)
                      +.   +||+|||++..
T Consensus       167 ~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          167 ENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             STTCCEEECCCTTCEE
T ss_pred             CCCCcEEEecCcceeE
Confidence            54   99999999753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.88  E-value=3.7e-23  Score=204.24  Aligned_cols=81  Identities=26%  Similarity=0.473  Sum_probs=74.6

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ++...+|+||||+ +|+|..++.....+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+|+.
T Consensus       127 ~~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          127 EKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             TTCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             ccCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchh
Confidence            4446799999998 579999998888899999999999999999999999999999999999999999999999999976


Q ss_pred             Cc
Q psy17600         93 LK   94 (351)
Q Consensus        93 ~~   94 (351)
                      ..
T Consensus       206 ~~  207 (458)
T 3rp9_A          206 VD  207 (458)
T ss_dssp             TT
T ss_pred             cc
Confidence            53

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.88  E-value=6.2e-23  Score=193.77  Aligned_cols=88  Identities=22%  Similarity=0.295  Sum_probs=79.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc--
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH--   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~--   81 (351)
                      ++..+..+++...+|+||||+ ||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.  
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~  145 (330)
T 2izr_A           67 IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKT  145 (330)
T ss_dssp             SCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTC
T ss_pred             CCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCC
Confidence            345566788889999999999 9999999986 467999999999999999999999999999999999999998887  


Q ss_pred             ---EEEEecCccccC
Q psy17600         82 ---IKLSDFGLCTGL   93 (351)
Q Consensus        82 ---~kl~DFGla~~~   93 (351)
                         +||+|||+++..
T Consensus       146 ~~~~kl~DFg~a~~~  160 (330)
T 2izr_A          146 QQVIHIIDFALAKEY  160 (330)
T ss_dssp             TTSEEECCCTTCEES
T ss_pred             CceEEEEEcccceee
Confidence               999999998643

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.88  E-value=1.1e-23  Score=199.12  Aligned_cols=89  Identities=31%  Similarity=0.497  Sum_probs=82.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..+++...+|+|||||+||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        66 nIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~k  145 (323)
T 3tki_A           66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK  145 (323)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             CCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEE
Confidence            34556677889999999999999999999998777899999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       146 l~Dfg~a~~  154 (323)
T 3tki_A          146 ISDFGLATV  154 (323)
T ss_dssp             ECCCTTCEE
T ss_pred             EEEeeccce
Confidence            999999753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.88  E-value=3.1e-23  Score=198.68  Aligned_cols=77  Identities=25%  Similarity=0.423  Sum_probs=71.6

Q ss_pred             CcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec--CCCcEEEEecCcccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD--ARGHIKLSDFGLCTG   92 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~--~~~~~kl~DFGla~~   92 (351)
                      ..+||||||| ||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++  .++.+||+|||+++.
T Consensus       125 ~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~  203 (364)
T 3op5_A          125 SYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR  203 (364)
T ss_dssp             EEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEE
T ss_pred             ceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCccee
Confidence            4589999999 99999999875 6799999999999999999999999999999999999998  889999999999864


Q ss_pred             C
Q psy17600         93 L   93 (351)
Q Consensus        93 ~   93 (351)
                      +
T Consensus       204 ~  204 (364)
T 3op5_A          204 Y  204 (364)
T ss_dssp             S
T ss_pred             c
Confidence            4

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.88  E-value=1.8e-22  Score=190.62  Aligned_cols=183  Identities=21%  Similarity=0.333  Sum_probs=140.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---   78 (351)
                      +.+..+..|++...+|+|||||.||+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.   
T Consensus        90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~  169 (327)
T 3lm5_A           90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP  169 (327)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTT
T ss_pred             CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCC
Confidence            4556677789999999999999999999988543  67899999999999999999999999999999999999987   


Q ss_pred             CCcEEEEecCccccCcCCC------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCC
Q psy17600         79 RGHIKLSDFGLCTGLKKSH------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWR  134 (351)
Q Consensus        79 ~~~~kl~DFGla~~~~~~~------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~  134 (351)
                      ++.+||+|||+++......      .+..|..+      .+....|.            +..||.+.+..+.+..+....
T Consensus       170 ~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  249 (327)
T 3lm5_A          170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN  249 (327)
T ss_dssp             BCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc
Confidence            7899999999997654322      12222211      12222232            378999999999888887654


Q ss_pred             CceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        135 DTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       135 ~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                      .....+....++++++++|.++ ..+|.+|.+    ++++.   .||||++++|+.+...
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~ll---~h~~~~~~~~~~~~~~  302 (327)
T 3lm5_A          250 VDYSEETFSSVSQLATDFIQSLLVKNPEKRPT----AEICL---SHSWLQQWDFENLFHP  302 (327)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHT---TCGGGCCCCTTCC---
T ss_pred             cccCchhhcccCHHHHHHHHHHcCCChhhCcC----HHHHh---CCHhhcccccccccCc
Confidence            4443333345889999999995 579999986    56776   8999999999988543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.88  E-value=7.1e-23  Score=192.25  Aligned_cols=88  Identities=30%  Similarity=0.482  Sum_probs=78.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~   78 (351)
                      +++..+..+.+...+|+|||||+||+|.+++.+...   +++..+..++.|++.||.|||++|  |+||||||+||+++.
T Consensus        95 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~  174 (309)
T 3p86_A           95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK  174 (309)
T ss_dssp             TBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT
T ss_pred             CEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC
Confidence            345566778899999999999999999999986553   899999999999999999999999  999999999999999


Q ss_pred             CCcEEEEecCccc
Q psy17600         79 RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ~~~~kl~DFGla~   91 (351)
                      ++.+||+|||+++
T Consensus       175 ~~~~kL~Dfg~a~  187 (309)
T 3p86_A          175 KYTVKVCDFGLSR  187 (309)
T ss_dssp             TCCEEECCCC---
T ss_pred             CCcEEECCCCCCc
Confidence            9999999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.88  E-value=1.4e-22  Score=193.38  Aligned_cols=87  Identities=29%  Similarity=0.442  Sum_probs=77.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---   78 (351)
                      +++..+..|.+...+|+||||+ |++|.+++....  .+++..++.++.|++.||.|||++||+||||||+|||++.   
T Consensus        97 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A           97 NIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             GBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTC
T ss_pred             CeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccc
Confidence            4556667788999999999999 999999998654  5899999999999999999999999999999999999975   


Q ss_pred             ----------------------CCcEEEEecCccc
Q psy17600         79 ----------------------RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ----------------------~~~~kl~DFGla~   91 (351)
                                            ++.+||+|||+++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~  210 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT  210 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCE
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCce
Confidence                                  7788999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.88  E-value=4.3e-22  Score=191.20  Aligned_cols=174  Identities=23%  Similarity=0.413  Sum_probs=135.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---G   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~   80 (351)
                      +++..+..|++...+|+|||||.||+|.+.+.....+++..+..++.|++.||.|||++||+||||||+|||++.+   +
T Consensus        89 nIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~  168 (362)
T 2bdw_A           89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA  168 (362)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTC
T ss_pred             CCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence            3556667789999999999999999999999888889999999999999999999999999999999999999765   4


Q ss_pred             cEEEEecCccccCcCCCc-ccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR-TDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||++........ ....++..           +....|.            +.+||.+.+..+++..+......
T Consensus       169 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  248 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD  248 (362)
T ss_dssp             CEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence            599999999976543221 11112222           2222332            37999999999999998875433


Q ss_pred             eeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        137 LVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ...+....++++++++|.+++ .+|.+|..    +.++.   .||||..
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~~~~  290 (362)
T 2bdw_A          249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQAL---KVPWICN  290 (362)
T ss_dssp             CCTTGGGGSCHHHHHHHHHHSCSSGGGSCC----HHHHT---TSHHHHT
T ss_pred             CCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHh---cCcccCC
Confidence            222222357999999999955 79999987    45666   8899975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.87  E-value=3.2e-23  Score=194.13  Aligned_cols=76  Identities=28%  Similarity=0.561  Sum_probs=71.1

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+|+|||||+||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence            3599999999999999998888899999999999999999999999999999999999999999999999999753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=190.52  Aligned_cols=86  Identities=31%  Similarity=0.462  Sum_probs=77.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+.++..+++...+|+||||| +|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus       119 iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~k  197 (311)
T 3p1a_A          119 CVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCK  197 (311)
T ss_dssp             BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEE
T ss_pred             EEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEE
Confidence            455666788999999999999 67888887654 4699999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       198 l~DFG~a~  205 (311)
T 3p1a_A          198 LGDFGLLV  205 (311)
T ss_dssp             ECCCTTCE
T ss_pred             Eccceeee
Confidence            99999975

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=192.92  Aligned_cols=89  Identities=24%  Similarity=0.305  Sum_probs=81.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCC-CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGG-DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg-~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..|++...+|+||||+.+| +|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        90 ~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  169 (335)
T 3dls_A           90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTI  169 (335)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred             CEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcE
Confidence            3455667789999999999999777 999999988889999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       170 kL~Dfg~a~~  179 (335)
T 3dls_A          170 KLIDFGSAAY  179 (335)
T ss_dssp             EECCCTTCEE
T ss_pred             EEeecccceE
Confidence            9999999753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.7e-22  Score=190.70  Aligned_cols=172  Identities=22%  Similarity=0.312  Sum_probs=134.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC--CC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA--RG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~--~~   80 (351)
                      .++..+..|++...+|+|||||+||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.  ++
T Consensus        62 nIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~  141 (321)
T 1tki_A           62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS  141 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred             CCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCC
Confidence            3455667789999999999999999999999765 36999999999999999999999999999999999999987  78


Q ss_pred             cEEEEecCccccCcCCCc-ccccccCCCCC-----------Cccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR-TDFYRDLSQAK-----------PSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-~~~~~~~~~~~-----------~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||++........ ....++..+..           ..|.            +.+||.+.+..+....+....  
T Consensus       142 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--  219 (321)
T 1tki_A          142 TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE--  219 (321)
T ss_dssp             CEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--
T ss_pred             CEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCC--
Confidence            999999999986543321 11112222222           2222            369999999999999988743  


Q ss_pred             eeCCC--CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        137 LVFPP--EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       137 ~~~p~--~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ..++.  ...+|++++++|.+ |..+|.+|..    ++++.   .||||+.
T Consensus       220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt----~~e~l---~hp~~~~  263 (321)
T 1tki_A          220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEAL---QHPWLKQ  263 (321)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---HSHHHHS
T ss_pred             CCCChhhhccCCHHHHHHHHHHcCCChhHCcC----HHHHh---cChhhcc
Confidence            33332  23579999999999 5579999986    56777   7899975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.87  E-value=4e-22  Score=186.10  Aligned_cols=85  Identities=28%  Similarity=0.434  Sum_probs=74.2

Q ss_pred             EeeeEEEecCC-----cEEEEEecCCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          6 CLKQLRMSDPI-----NLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         6 ~~~~~~f~~~~-----~lylVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      +..+..+.+..     .+|+||||+. |+|.+++.....  +++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus        77 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~  155 (308)
T 3g33_A           77 VRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS  155 (308)
T ss_dssp             CCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT
T ss_pred             EEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC
Confidence            34444555544     5899999997 599999987654  899999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCccc
Q psy17600         79 RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ~~~~kl~DFGla~   91 (351)
                      ++.+||+|||+++
T Consensus       156 ~~~~kl~Dfg~a~  168 (308)
T 3g33_A          156 GGTVKLADFGLAR  168 (308)
T ss_dssp             TSCEEECSCSCTT
T ss_pred             CCCEEEeeCcccc
Confidence            9999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.87  E-value=1.4e-21  Score=181.01  Aligned_cols=181  Identities=28%  Similarity=0.406  Sum_probs=138.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ..+..+..+++...+|+||||++||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        85 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  164 (298)
T 1phk_A           85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK  164 (298)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             CEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEE
Confidence            34556667888999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc------ccccccCC------------CCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSHR------TDFYRDLS------------QAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~------~~~~~~~~------------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||++........      +..|..+.            +....|.            +..||.+.+.......+...
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  244 (298)
T 1phk_A          165 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG  244 (298)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC
Confidence            999999876543221      11121111            1122232            36899999988888888875


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhh
Q psy17600        134 RDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR  191 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~  191 (351)
                      ......|....+++++.++|.++ ..+|.+|..    ++++.   .||||++.+|+.++
T Consensus       245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll---~h~~~~~~~~~~~~  296 (298)
T 1phk_A          245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEAL---AHPFFQQYVVEEVR  296 (298)
T ss_dssp             CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHT---TSGGGCTTC-----
T ss_pred             CcccCcccccccCHHHHHHHHHHccCCcccCCC----HHHHH---hChHhhhccchhhc
Confidence            43333333335789999999995 579999986    56676   89999999998875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.87  E-value=3.4e-22  Score=184.98  Aligned_cols=87  Identities=24%  Similarity=0.333  Sum_probs=77.4

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc---
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH---   81 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~---   81 (351)
                      ...+..+++...+|+||||+ ||+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.   
T Consensus        69 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~  147 (298)
T 1csn_A           69 PNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNA  147 (298)
T ss_dssp             CCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTT
T ss_pred             CeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCC
Confidence            34455678888999999999 999999998654 5999999999999999999999999999999999999987776   


Q ss_pred             --EEEEecCccccC
Q psy17600         82 --IKLSDFGLCTGL   93 (351)
Q Consensus        82 --~kl~DFGla~~~   93 (351)
                        +||+|||+++..
T Consensus       148 ~~~kl~Dfg~~~~~  161 (298)
T 1csn_A          148 NMIYVVDFGMVKFY  161 (298)
T ss_dssp             TCEEECCCTTCEES
T ss_pred             CeEEEEECcccccc
Confidence              999999998643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.87  E-value=2.2e-22  Score=194.20  Aligned_cols=89  Identities=22%  Similarity=0.316  Sum_probs=81.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      .++..+..+.+...+|+|||||+||+|.+++....                .+++..+..++.|++.||.|||++||+||
T Consensus       136 nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  215 (382)
T 3tt0_A          136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR  215 (382)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             hhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence            34566677888999999999999999999998653                48999999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+|||++.++.+||+|||+++.
T Consensus       216 Dlkp~NIll~~~~~~kL~DFG~a~~  240 (382)
T 3tt0_A          216 DLAARNVLVTEDNVMKIADFGLARD  240 (382)
T ss_dssp             CCCGGGEEECTTCCEEECSCSCCCC
T ss_pred             CCCcceEEEcCCCcEEEcccCcccc
Confidence            9999999999999999999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.87  E-value=6.1e-22  Score=197.12  Aligned_cols=170  Identities=20%  Similarity=0.383  Sum_probs=136.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..+++...+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        77 nIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vk  156 (476)
T 2y94_A           77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK  156 (476)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEE
T ss_pred             CCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeE
Confidence            34566777899999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-ccccccCCCC------------CCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-TDFYRDLSQA------------KPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-~~~~~~~~~~------------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++........ ....++..+.            ...|.            +.+||.+.+....+.+|...  ...
T Consensus       157 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~  234 (476)
T 2y94_A          157 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFY  234 (476)
T ss_dssp             ECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT--CCC
T ss_pred             EEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CcC
Confidence            999999976543221 1111222221            12232            37899999999999999864  334


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .|.  .++++++++|.++ ..+|.+|.+    ++++.   .||||+.
T Consensus       235 ~p~--~~s~~~~~Li~~~L~~dP~~Rpt----~~eil---~hp~~~~  272 (476)
T 2y94_A          235 TPQ--YLNPSVISLLKHMLQVDPMKRAT----IKDIR---EHEWFKQ  272 (476)
T ss_dssp             CCT--TCCHHHHHHHHHHTCSSTTTSCC----HHHHH---TCHHHHT
T ss_pred             CCc--cCCHHHHHHHHHHcCCCchhCcC----HHHHH---hCHHhhh
Confidence            443  3789999999994 579999986    56777   8899985

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.87  E-value=1.5e-22  Score=192.39  Aligned_cols=87  Identities=28%  Similarity=0.392  Sum_probs=79.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .++..+..+.+...+|+||| +.+|+|.+++.+...+++..+..++.|++.||.|||++||+||||||+|||++ ++.+|
T Consensus        70 ~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~k  147 (343)
T 3dbq_A           70 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLK  147 (343)
T ss_dssp             TBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEE
T ss_pred             ceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEE
Confidence            45666777889999999999 66899999999988999999999999999999999999999999999999996 68899


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       148 l~DFG~a~~  156 (343)
T 3dbq_A          148 LIDFGIANQ  156 (343)
T ss_dssp             ECCCSSSCC
T ss_pred             Eeecccccc
Confidence            999999753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.87  E-value=1.7e-22  Score=190.43  Aligned_cols=83  Identities=20%  Similarity=0.424  Sum_probs=75.0

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      .+.....+|+||||+.+|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        82 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  161 (325)
T 3kex_A           82 GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV  161 (325)
T ss_dssp             EEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred             EEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCc
Confidence            344467799999999999999999764 5789999999999999999999999999999999999999999999999999


Q ss_pred             cccC
Q psy17600         90 CTGL   93 (351)
Q Consensus        90 a~~~   93 (351)
                      ++..
T Consensus       162 a~~~  165 (325)
T 3kex_A          162 ADLL  165 (325)
T ss_dssp             GGGS
T ss_pred             cccc
Confidence            8643

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.87  E-value=2.5e-22  Score=188.62  Aligned_cols=87  Identities=28%  Similarity=0.441  Sum_probs=75.0

Q ss_pred             EeeeEEEecCC--cEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe----
Q psy17600          6 CLKQLRMSDPI--NLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL----   76 (351)
Q Consensus         6 ~~~~~~f~~~~--~lylVmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill----   76 (351)
                      +..+..+.+..  .+|+|||||+||+|.+++....   .+++..+..++.|++.||.|||++||+||||||+||++    
T Consensus        70 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  149 (319)
T 4euu_A           70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE  149 (319)
T ss_dssp             CCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECT
T ss_pred             ceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccC
Confidence            34444555544  8899999999999999997543   38999999999999999999999999999999999999    


Q ss_pred             cCCCcEEEEecCcccc
Q psy17600         77 DARGHIKLSDFGLCTG   92 (351)
Q Consensus        77 ~~~~~~kl~DFGla~~   92 (351)
                      +.++.+||+|||+++.
T Consensus       150 ~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A          150 DGQSVYKLTDFGAARE  165 (319)
T ss_dssp             TSCEEEEECCCTTCEE
T ss_pred             CCCceEEEccCCCcee
Confidence            7778899999999753

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=191.74  Aligned_cols=89  Identities=20%  Similarity=0.297  Sum_probs=80.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+++...+|+|||||+||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus       111 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  190 (325)
T 3kul_A          111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC  190 (325)
T ss_dssp             TBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             CCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCE
Confidence            3455666788889999999999999999999754 579999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       191 kl~Dfg~a~~  200 (325)
T 3kul_A          191 KVSDFGLSRV  200 (325)
T ss_dssp             EECCCSSCEE
T ss_pred             EECCCCcccc
Confidence            9999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.87  E-value=9.4e-23  Score=194.08  Aligned_cols=89  Identities=28%  Similarity=0.379  Sum_probs=77.6

Q ss_pred             ceEeeeEEEecCC-cEEEEEecCCCCCHHHHHHhCCC-------------------------------------------
Q psy17600          4 YACLKQLRMSDPI-NLYLIMEFLPGGDMMTLLMKKDT-------------------------------------------   39 (351)
Q Consensus         4 ~~~~~~~~f~~~~-~lylVmEy~~gg~L~~~l~~~~~-------------------------------------------   39 (351)
                      .++..+..+.+.. .+|+|||||+||+|.+++.....                                           
T Consensus        87 niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (359)
T 3vhe_A           87 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG  166 (359)
T ss_dssp             TBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred             ceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence            3455555666654 49999999999999999976533                                           


Q ss_pred             -----------------------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         40 -----------------------LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        40 -----------------------l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                                             +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  242 (359)
T 3vhe_A          167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD  242 (359)
T ss_dssp             -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred             cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceee
Confidence                                   88999999999999999999999999999999999999999999999999753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.87  E-value=6.9e-22  Score=184.80  Aligned_cols=178  Identities=23%  Similarity=0.427  Sum_probs=127.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc--
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH--   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~--   81 (351)
                      +++..+..|++...+|+|||||+||+|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.  
T Consensus        72 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~  151 (316)
T 2ac3_A           72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVS  151 (316)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSC
T ss_pred             CeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcC
Confidence            345566678899999999999999999999988888999999999999999999999999999999999999988775  


Q ss_pred             -EEEEecCccccCcCCC--------------cccccccCC-----------CCCCccc------------CCCCCCCCC-
Q psy17600         82 -IKLSDFGLCTGLKKSH--------------RTDFYRDLS-----------QAKPSDF------------SYPPFCSEN-  122 (351)
Q Consensus        82 -~kl~DFGla~~~~~~~--------------~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~-  122 (351)
                       +||+|||++.......              .+..|..+.           +....|.            +.+||.+.+ 
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence             9999999987543211              111222111           1222332            368887754 


Q ss_pred             --------------HHHHHHHHHcCCCceeCCCC--CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        123 --------------PQETYRKVMSWRDTLVFPPE--VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       123 --------------~~~~~~~i~~~~~~~~~p~~--~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                                    ...++..+...  ...+|..  ..++++++++|.++ ..+|.+|..    ++++.   .||||++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l---~hp~~~~~  302 (316)
T 2ac3_A          232 SDCGWDRGEACPACQNMLFESIQEG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVL---QHPWVQGC  302 (316)
T ss_dssp             SCSCC----CCHHHHHHHHHHHHHC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHH---HSTTCC--
T ss_pred             ccccccccccchhHHHHHHHHHhcc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCC----HHHHh---cChhhcCC
Confidence                          24456666653  3344422  24789999999995 579999986    56777   78999988


Q ss_pred             Cchhh
Q psy17600        186 DWDHI  190 (351)
Q Consensus       186 dw~~l  190 (351)
                      .|+..
T Consensus       303 ~~~~~  307 (316)
T 2ac3_A          303 APENT  307 (316)
T ss_dssp             -----
T ss_pred             CCccc
Confidence            77643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.87  E-value=4.1e-22  Score=198.05  Aligned_cols=180  Identities=25%  Similarity=0.389  Sum_probs=141.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---cCCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---DARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---~~~~   80 (351)
                      .++..+..|++...+|+|||||.||+|.+.+.....+++..+..++.|++.||.|||++||+||||||+|||+   +.++
T Consensus        87 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  166 (484)
T 3nyv_A           87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA  166 (484)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC
T ss_pred             CCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCC
Confidence            3456677789999999999999999999999988899999999999999999999999999999999999999   4678


Q ss_pred             cEEEEecCccccCcCCCc------ccccccC-----CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYRDL-----SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~~~-----~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      .+||+|||+++.......      +..|..+     .+....|.            +.+||.+.+..++...+.......
T Consensus       167 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  246 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF  246 (484)
T ss_dssp             CEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEEeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            999999999875543221      2222211     12222332            379999999999999998765444


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      ..|....+|++++++|.++ ..+|.+|.+    ++++.   .||||+...++.+
T Consensus       247 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l---~h~~~~~~~~~~~  293 (484)
T 3nyv_A          247 ELPQWKKVSESAKDLIRKMLTYVPSMRIS----ARDAL---DHEWIQTYTKEQI  293 (484)
T ss_dssp             CSGGGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHH---TSHHHHHHTC---
T ss_pred             CCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHh---hChhhcccccccc
Confidence            4454456899999999994 579999986    56777   8899987666443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.87  E-value=8.6e-22  Score=185.20  Aligned_cols=180  Identities=27%  Similarity=0.408  Sum_probs=141.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC----
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG----   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~----   80 (351)
                      .+..+..+++...+|+||||++||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++    
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~  156 (321)
T 2a2a_A           77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP  156 (321)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSC
T ss_pred             cceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcC
Confidence            4556667889999999999999999999998888899999999999999999999999999999999999999888    


Q ss_pred             cEEEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||++........      +..|..+      .+....|.            +..||.+.+..+....+....  
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--  234 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVS--  234 (321)
T ss_dssp             CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC--
T ss_pred             CEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc--
Confidence            799999999976543221      1222211      11222232            368999999998888887643  


Q ss_pred             eeCCCC--CCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcC
Q psy17600        137 LVFPPE--VPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER  193 (351)
Q Consensus       137 ~~~p~~--~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~  193 (351)
                      ..++..  ...+++++++|.+ |..+|.+|.+    ++++.   .||||.+++|.....+
T Consensus       235 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l---~hp~~~~~~~~~~~~~  287 (321)
T 2a2a_A          235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLT----IQEAL---RHPWITPVDNQQAMVR  287 (321)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC----HHHHH---HSTTTSCSSHHHHHHH
T ss_pred             cccChhhhcccCHHHHHHHHHHcCCChhhCcC----HHHHh---cCccccCCCccccccc
Confidence            223221  2478999999999 5579999986    56777   7899999999876543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.86  E-value=7.8e-22  Score=190.50  Aligned_cols=180  Identities=16%  Similarity=0.241  Sum_probs=126.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++.++..|++...+|+|||||+||+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.
T Consensus        87 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~  166 (389)
T 3gni_B           87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK  166 (389)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             CCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            4566677899999999999999999999999875  67999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCC--------------CcccccccC--------CCCCCccc------------CCCCCCCCCHHHHH
Q psy17600         82 IKLSDFGLCTGLKKS--------------HRTDFYRDL--------SQAKPSDF------------SYPPFCSENPQETY  127 (351)
Q Consensus        82 ~kl~DFGla~~~~~~--------------~~~~~~~~~--------~~~~~~~~------------~~~Pf~~~~~~~~~  127 (351)
                      +||+|||++......              ..+..|..+        .+....|.            +.+||.+.+.....
T Consensus       167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  246 (389)
T 3gni_B          167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML  246 (389)
T ss_dssp             EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH
T ss_pred             EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            999999987543211              011112211        12222332            36899876655444


Q ss_pred             HHHHcCCCc------------------------------------------eeCCCCCCCCHHHHHHHHH-HhcCccccC
Q psy17600        128 RKVMSWRDT------------------------------------------LVFPPEVPISEEARETIVR-FCSECDRRL  164 (351)
Q Consensus       128 ~~i~~~~~~------------------------------------------~~~p~~~~~s~~~~dli~~-l~~~~~~rl  164 (351)
                      ..+......                                          ...|....++++++++|.+ |..+|.+|.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp  326 (389)
T 3gni_B          247 LEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP  326 (389)
T ss_dssp             HHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCC
Confidence            333321100                                          0011122378999999999 557999998


Q ss_pred             CCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        165 GSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       165 g~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      +    ++++.   .||||+.+.|...
T Consensus       327 t----a~ell---~hp~f~~~~~~~~  345 (389)
T 3gni_B          327 S----ASTLL---NHSFFKQIKRRAS  345 (389)
T ss_dssp             C----HHHHT---TSGGGGGC---CC
T ss_pred             C----HHHHh---cCHHHHHHhhcch
Confidence            7    56776   8999999988543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.86  E-value=2.2e-22  Score=195.13  Aligned_cols=87  Identities=28%  Similarity=0.392  Sum_probs=78.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .++..+..+.+...+|+||| +.+|+|.+++.+...+++..+..++.||+.||.|||++||+||||||+|||++ ++.+|
T Consensus       117 ~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~k  194 (390)
T 2zmd_A          117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLK  194 (390)
T ss_dssp             TBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEE
T ss_pred             eEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEE
Confidence            45566667888889999999 67899999999888999999999999999999999999999999999999995 68999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       195 l~DFG~a~~  203 (390)
T 2zmd_A          195 LIDFGIANQ  203 (390)
T ss_dssp             ECCCSSSCC
T ss_pred             EEecCcccc
Confidence            999999753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.86  E-value=9.3e-22  Score=195.83  Aligned_cols=177  Identities=23%  Similarity=0.393  Sum_probs=139.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec---CCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD---ARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~---~~~   80 (351)
                      .++..+..+++...+|+|||||.||+|.+.+.+...+++..+..++.|++.||.|||++||+||||||+|||++   .++
T Consensus        82 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~  161 (486)
T 3mwu_A           82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC  161 (486)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTC
T ss_pred             CcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence            34566777899999999999999999999998888899999999999999999999999999999999999995   456


Q ss_pred             cEEEEecCccccCcCCC------cccccccCC-----CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         81 HIKLSDFGLCTGLKKSH------RTDFYRDLS-----QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~------~~~~~~~~~-----~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      .+||+|||+++......      .+..|..+.     +....|.            +.+||.+.+..+....+.......
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  241 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF  241 (486)
T ss_dssp             CEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS
T ss_pred             CEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            89999999997543322      122232221     1112222            379999999999999998765544


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      ..|....+|++++++|.++ ..+|.+|.+    +.++.   .||||+....
T Consensus       242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~~~l---~hp~~~~~~~  285 (486)
T 3mwu_A          242 DLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCL---EHPWIQKYSS  285 (486)
T ss_dssp             CSGGGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHH---HCHHHHHTCC
T ss_pred             CCcccCCCCHHHHHHHHHHcCCChhhCcC----HHHHh---cCHhhccCcc
Confidence            5555456899999999995 579999986    56777   7899986544

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.86  E-value=2.5e-21  Score=187.78  Aligned_cols=177  Identities=24%  Similarity=0.370  Sum_probs=136.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC--CC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA--RG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~--~~   80 (351)
                      .++..+..|++...+|+|||||.||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.  .+
T Consensus       109 nIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~  188 (387)
T 1kob_A          109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS  188 (387)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC
T ss_pred             CCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCC
Confidence            34566777899999999999999999999987543 6899999999999999999999999999999999999974  47


Q ss_pred             cEEEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+++.......      +..|..+      .+....|.            +.+||.+.+..+....+......
T Consensus       189 ~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~  268 (387)
T 1kob_A          189 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE  268 (387)
T ss_dssp             CEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC
T ss_pred             ceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            899999999986543221      2222211      11222232            37999999999888888864433


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      ...+....++++++++|.+ |..+|.+|.+    ++++.   .||||++..+
T Consensus       269 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell---~hp~~~~~~~  313 (387)
T 1kob_A          269 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDAL---EHPWLKGDHS  313 (387)
T ss_dssp             CCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---TSTTTSSCCT
T ss_pred             CCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHh---hCccccCCcc
Confidence            2222223589999999999 5579999986    56777   8899997654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.86  E-value=1.2e-21  Score=185.06  Aligned_cols=177  Identities=20%  Similarity=0.299  Sum_probs=130.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-----C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-----A   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-----~   78 (351)
                      +++..+..+++...+|+|||||. |+|.+++.....+++..++.++.|++.||.|||++||+||||||+|||++     .
T Consensus        94 ~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~  172 (329)
T 3gbz_A           94 NIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE  172 (329)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----
T ss_pred             CcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCc
Confidence            34556667889999999999998 59999999888899999999999999999999999999999999999994     4


Q ss_pred             CCcEEEEecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHc
Q psy17600         79 RGHIKLSDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMS  132 (351)
Q Consensus        79 ~~~~kl~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~  132 (351)
                      .+.+||+|||++.......       .+..|..+       .+....|.            +.+||.+.+..+....+..
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          173 TPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence            4569999999987543211       12222211       12222332            3689999888877776654


Q ss_pred             CCCcee----------------CCCCC----------CCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        133 WRDTLV----------------FPPEV----------PISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       133 ~~~~~~----------------~p~~~----------~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      ......                +|...          .++++++++|.++ ..+|.+|.+    ++++.   .||||+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~f~~~  325 (329)
T 3gbz_A          253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS----AKNAL---EHPYFSHN  325 (329)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHH---TSGGGSSS
T ss_pred             HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC----HHHHh---CCcccCCC
Confidence            211100                01000          1678999999994 579999986    56777   89999999


Q ss_pred             Cch
Q psy17600        186 DWD  188 (351)
Q Consensus       186 dw~  188 (351)
                      +|+
T Consensus       326 ~~~  328 (329)
T 3gbz_A          326 DFD  328 (329)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            996

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.86  E-value=1e-22  Score=193.76  Aligned_cols=78  Identities=26%  Similarity=0.387  Sum_probs=73.2

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC--cEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG--HIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~--~~kl~DFGla~~   92 (351)
                      ...+|+||||| ||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.
T Consensus       124 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~  202 (345)
T 2v62_A          124 RSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYR  202 (345)
T ss_dssp             CEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEE
T ss_pred             CcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCcee
Confidence            77899999999 999999998777899999999999999999999999999999999999998887  999999999865


Q ss_pred             C
Q psy17600         93 L   93 (351)
Q Consensus        93 ~   93 (351)
                      +
T Consensus       203 ~  203 (345)
T 2v62_A          203 Y  203 (345)
T ss_dssp             S
T ss_pred             c
Confidence            4

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.86  E-value=1.7e-21  Score=186.84  Aligned_cols=171  Identities=25%  Similarity=0.412  Sum_probs=126.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc--
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH--   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~--   81 (351)
                      +++..+..|.+...+|+|||||.||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+||+++.++.  
T Consensus        77 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~  156 (361)
T 3uc3_A           77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR  156 (361)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCC
T ss_pred             CCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCce
Confidence            345667778899999999999999999999988888999999999999999999999999999999999999987765  


Q ss_pred             EEEEecCccccCcCCC------cccccccC------CC-CCCccc------------CCCCCCCCCH----HHHHHHHHc
Q psy17600         82 IKLSDFGLCTGLKKSH------RTDFYRDL------SQ-AKPSDF------------SYPPFCSENP----QETYRKVMS  132 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~------~~~~~~~~------~~-~~~~~~------------~~~Pf~~~~~----~~~~~~i~~  132 (351)
                      +||+|||+++......      .+..|..+      .+ ....|.            +.+||.+.+.    ....+.+..
T Consensus       157 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~  236 (361)
T 3uc3_A          157 LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS  236 (361)
T ss_dssp             EEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHT
T ss_pred             EEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc
Confidence            9999999987432211      11122111      11 111232            3689987543    455566664


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        133 WRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                        ....+|....++++++++|.+ |..+|.+|.+    ++++.   .||||.
T Consensus       237 --~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----~~ell---~hp~f~  279 (361)
T 3uc3_A          237 --VKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIK---THSWFL  279 (361)
T ss_dssp             --TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCC----HHHHH---TSHHHH
T ss_pred             --CCCCCCCcCCCCHHHHHHHHHHccCChhHCcC----HHHHH---hCcchh
Confidence              345667666789999999999 4579999986    56777   889995

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.86  E-value=6.1e-22  Score=187.61  Aligned_cols=89  Identities=25%  Similarity=0.428  Sum_probs=81.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..+++...+|+|||||.|++|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus       102 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~k  181 (335)
T 2owb_A          102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVK  181 (335)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEE
T ss_pred             CCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEE
Confidence            34555667888999999999999999999998878899999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       182 l~Dfg~~~~  190 (335)
T 2owb_A          182 IGDFGLATK  190 (335)
T ss_dssp             ECCCTTCEE
T ss_pred             EeeccCcee
Confidence            999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.86  E-value=8.3e-23  Score=196.39  Aligned_cols=88  Identities=24%  Similarity=0.369  Sum_probs=78.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL   76 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill   76 (351)
                      +++..+..+.+...+|+|||||+||+|.+++...       ..+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus       135 nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  214 (367)
T 3l9p_A          135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL  214 (367)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE
Confidence            4556677788889999999999999999999764       348899999999999999999999999999999999999


Q ss_pred             cCCC---cEEEEecCccc
Q psy17600         77 DARG---HIKLSDFGLCT   91 (351)
Q Consensus        77 ~~~~---~~kl~DFGla~   91 (351)
                      +.+|   .+||+|||+++
T Consensus       215 ~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          215 TCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             SCSSTTCCEEECCCHHHH
T ss_pred             ecCCCCceEEECCCcccc
Confidence            9655   59999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.86  E-value=1.3e-21  Score=184.88  Aligned_cols=172  Identities=26%  Similarity=0.452  Sum_probs=124.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---   80 (351)
                      .++..+..|++...+|+|||||+||+|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++   
T Consensus        67 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~  146 (325)
T 3kn6_A           67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL  146 (325)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----C
T ss_pred             CeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcc
Confidence            45666778899999999999999999999999988999999999999999999999999999999999999997765   


Q ss_pred             cEEEEecCccccCcCCCc-------ccccccCC------CCCCccc------------CCCCCCCCC-------HHHHHH
Q psy17600         81 HIKLSDFGLCTGLKKSHR-------TDFYRDLS------QAKPSDF------------SYPPFCSEN-------PQETYR  128 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-------~~~~~~~~------~~~~~~~------------~~~Pf~~~~-------~~~~~~  128 (351)
                      .+||+|||+++.......       +..|..+.      +....|.            +.+||.+.+       ..+...
T Consensus       147 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~  226 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK  226 (325)
T ss_dssp             EEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH
T ss_pred             cEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH
Confidence            899999999975432211       11222221      1112232            368887643       356677


Q ss_pred             HHHcCCCceeCCCC--CCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        129 KVMSWRDTLVFPPE--VPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       129 ~i~~~~~~~~~p~~--~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .+....  ..++..  ..+|++++++|.+ |..+|.+|...    +++.   .||||++
T Consensus       227 ~i~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~----~ell---~h~w~~~  276 (325)
T 3kn6_A          227 KIKKGD--FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM----SGLR---YNEWLQD  276 (325)
T ss_dssp             HHTTTC--CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCT----TTST---TCGGGCT
T ss_pred             HHHcCC--CCCCcccccCCCHHHHHHHHHHCCCChhHCCCH----HHHh---cChhhcc
Confidence            776543  333322  2479999999999 55799999974    3444   8999985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.86  E-value=1.5e-21  Score=194.83  Aligned_cols=178  Identities=25%  Similarity=0.404  Sum_probs=139.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---G   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~   80 (351)
                      .++.++..|++...+|+|||||.||+|.+.+.+...+++..+..++.|++.||.|||++||+||||||+|||++..   +
T Consensus        97 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  176 (494)
T 3lij_A           97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDA  176 (494)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTC
T ss_pred             CCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCC
Confidence            4556677889999999999999999999999888889999999999999999999999999999999999999764   5


Q ss_pred             cEEEEecCccccCcCCCc-ccccccCCC----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         81 HIKLSDFGLCTGLKKSHR-TDFYRDLSQ----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-~~~~~~~~~----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      .+||+|||++........ ....++..+          ....|.            +.+||.+.+..++...+.......
T Consensus       177 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  256 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF  256 (494)
T ss_dssp             CEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             cEEEEECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            699999999876543221 111122222          222232            379999999999999998765444


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      ..|....+|++++++|.++ ..+|.+|.+    ++++.   .||||+...+.
T Consensus       257 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l---~hp~~~~~~~~  301 (494)
T 3lij_A          257 DSPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQAL---EHPWIKEMCSK  301 (494)
T ss_dssp             CSGGGTTSCHHHHHHHHHHTCSSTTTSCC----HHHHH---TCHHHHHHHHH
T ss_pred             CchhcccCCHHHHHHHHHHCCCChhhCcc----HHHHh---cCcccccCccc
Confidence            4444346899999999995 579999986    56777   88999875443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.86  E-value=2.5e-22  Score=199.21  Aligned_cols=84  Identities=25%  Similarity=0.492  Sum_probs=70.8

Q ss_pred             eEeeeEEEecC------CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          5 ACLKQLRMSDP------INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         5 ~~~~~~~f~~~------~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      ++.++..|.+.      ..+|||||||.++ |.+.+.  ..+++..++.++.|++.||.|||++||+||||||+|||++.
T Consensus       123 Iv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~  199 (464)
T 3ttj_A          123 IISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS  199 (464)
T ss_dssp             BCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             CCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeC
Confidence            34445556443      4689999999764 666664  35899999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCccc
Q psy17600         79 RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ~~~~kl~DFGla~   91 (351)
                      ++.+||+|||+++
T Consensus       200 ~~~~kl~DFG~a~  212 (464)
T 3ttj_A          200 DCTLKILDFGLAR  212 (464)
T ss_dssp             TSCEEECCCCCC-
T ss_pred             CCCEEEEEEEeee
Confidence            9999999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.86  E-value=6.9e-22  Score=185.65  Aligned_cols=86  Identities=19%  Similarity=0.323  Sum_probs=75.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC----
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA----   78 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~----   78 (351)
                      .+..+..|++...+|+||||+ +++|.+++...+  .+++..+..++.|++.||.|||++||+||||||+||+++.    
T Consensus        79 i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  157 (339)
T 1z57_A           79 CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT  157 (339)
T ss_dssp             BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEE
T ss_pred             eEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccc
Confidence            344556688899999999999 899999998765  6889999999999999999999999999999999999987    


Q ss_pred             ---------------CCcEEEEecCccc
Q psy17600         79 ---------------RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ---------------~~~~kl~DFGla~   91 (351)
                                     ++.+||+|||+++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  185 (339)
T 1z57_A          158 EAYNPKIKRDERTLINPDIKVVDFGSAT  185 (339)
T ss_dssp             EEEC----CEEEEESCCCEEECCCSSCE
T ss_pred             cccCCccccccccccCCCceEeeCcccc
Confidence                           5678889988864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.86  E-value=1.1e-21  Score=184.17  Aligned_cols=177  Identities=22%  Similarity=0.383  Sum_probs=129.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .++..+..+++...+|+|||||+| +|.+.+... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        80 ~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~  158 (311)
T 3niz_A           80 NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGAL  158 (311)
T ss_dssp             TBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCE
T ss_pred             CEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCE
Confidence            345566678899999999999985 788877654 458999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      ||+|||+++......       .+..|..+       .+....|.            +.+||.+.+..+....+....+.
T Consensus       159 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  238 (311)
T 3niz_A          159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT  238 (311)
T ss_dssp             EECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCC
T ss_pred             EEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCC
Confidence            999999997653221       12222211       12222332            36899887766666555431111


Q ss_pred             ee---CC-----------------C------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        137 LV---FP-----------------P------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       137 ~~---~p-----------------~------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      ..   ++                 .      ...++++++++|.+ |..+|.+|.+    ++++.   .||||++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell---~hp~f~~~~~~  310 (311)
T 3niz_A          239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAM---NHPYFKDLDPQ  310 (311)
T ss_dssp             CCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCC----HHHHH---TSGGGTTSCTT
T ss_pred             CChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCC----HHHHh---cCcccccCCcc
Confidence            00   00                 0      01267899999999 4579999986    56777   89999999875

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.86  E-value=5.7e-22  Score=185.91  Aligned_cols=77  Identities=25%  Similarity=0.498  Sum_probs=69.7

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      .+|+|||||+||+|.+++.+...   ..+..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus       135 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  214 (332)
T 3qd2_B          135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM  214 (332)
T ss_dssp             EEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCccccc
Confidence            48999999999999999987543   455668889999999999999999999999999999999999999999998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=2.2e-22  Score=190.60  Aligned_cols=89  Identities=24%  Similarity=0.311  Sum_probs=79.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-----------------------CCCHHHHHHHHHHHHHHHHHHH
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-----------------------TLSEECTQFYIAETALAIDSIH   60 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-----------------------~l~e~~~~~~~~qi~~al~~lH   60 (351)
                      +++..+..+.+...+|+|||||+||+|.+++....                       .+++..+..++.|++.||.|||
T Consensus       110 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  189 (344)
T 1rjb_A          110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE  189 (344)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            34556667888899999999999999999997643                       2788999999999999999999


Q ss_pred             HCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         61 KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        61 ~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ++||+||||||+||+++.++.+||+|||++..
T Consensus       190 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~  221 (344)
T 1rjb_A          190 FKSCVHRDLAARNVLVTHGKVVKICDFGLARD  221 (344)
T ss_dssp             HTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred             hCCcccCCCChhhEEEcCCCcEEeCCCccCcc
Confidence            99999999999999999999999999999753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.86  E-value=2.6e-22  Score=187.19  Aligned_cols=89  Identities=21%  Similarity=0.298  Sum_probs=80.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCC------------------------CCHHHHHHHHHHHHHHHHHH
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDT------------------------LSEECTQFYIAETALAIDSI   59 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~------------------------l~e~~~~~~~~qi~~al~~l   59 (351)
                      .++..+..+.+...+|+|||||+||+|.+++.....                        +++..+..++.|++.||.||
T Consensus        87 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  166 (314)
T 2ivs_A           87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL  166 (314)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH
Confidence            345566678889999999999999999999986543                        78999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         60 HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        60 H~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |++||+||||||+||+++.++.+||+|||++..
T Consensus       167 H~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~  199 (314)
T 2ivs_A          167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD  199 (314)
T ss_dssp             HHTTEECCCCSGGGEEEETTTEEEECCCTTCEE
T ss_pred             HHCCCcccccchheEEEcCCCCEEEcccccccc
Confidence            999999999999999999999999999999753

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.86  E-value=4.7e-21  Score=178.47  Aligned_cols=174  Identities=23%  Similarity=0.406  Sum_probs=135.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---cCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---DARGH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---~~~~~   81 (351)
                      ++..+..+++...+|+||||++||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++   +.++.
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~  147 (304)
T 2jam_A           68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSK  147 (304)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCC
T ss_pred             eeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCC
Confidence            344556688899999999999999999999887889999999999999999999999999999999999999   77889


Q ss_pred             EEEEecCccccCcCCCcccccccCCCCCC-----------ccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         82 IKLSDFGLCTGLKKSHRTDFYRDLSQAKP-----------SDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~-----------~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      +||+|||++.............+..+..|           .|.            +.+||.+.+..+....+........
T Consensus       148 ~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  227 (304)
T 2jam_A          148 IMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE  227 (304)
T ss_dssp             EEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC
T ss_pred             EEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            99999999875443221111112222222           221            3689999999999888887543333


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      .+....++++++++|.+ |..+|.+|..    ++++.   .||||++.
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l---~h~~~~~~  268 (304)
T 2jam_A          228 SPFWDDISESAKDFICHLLEKDPNERYT----CEKAL---SHPWIDGN  268 (304)
T ss_dssp             TTTTTTSCHHHHHHHHHHHCSSTTTSCC----HHHHH---TSHHHHSS
T ss_pred             ccccccCCHHHHHHHHHHcCCChhHCcC----HHHHh---cCccccCC
Confidence            33334578999999999 5579999986    56777   88999753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.86  E-value=2.3e-22  Score=189.96  Aligned_cols=88  Identities=22%  Similarity=0.282  Sum_probs=79.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHH
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK------------------------DTLSEECTQFYIAETALAIDSI   59 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~------------------------~~l~e~~~~~~~~qi~~al~~l   59 (351)
                      +++..+..+.+...+|+|||||+||+|.+++...                        ..+++..+..++.|++.||.||
T Consensus       111 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L  190 (343)
T 1luf_A          111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  190 (343)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3455566788889999999999999999999764                        5689999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         60 HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        60 H~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |++||+||||||+||+++.++.+||+|||+++
T Consensus       191 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  222 (343)
T 1luf_A          191 SERKFVHRDLATRNCLVGENMVVKIADFGLSR  222 (343)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             HhCCeecCCCCcceEEECCCCeEEEeecCCCc
Confidence            99999999999999999999999999999975

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.86  E-value=9.2e-22  Score=189.74  Aligned_cols=180  Identities=23%  Similarity=0.358  Sum_probs=138.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe--cCCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL--DARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill--~~~~   80 (351)
                      +++..+..+++...+|||||||+||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+  +.++
T Consensus       147 nIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  226 (373)
T 2x4f_A          147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK  226 (373)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTT
T ss_pred             CCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCC
Confidence            3455667788999999999999999999988654 468999999999999999999999999999999999999  5678


Q ss_pred             cEEEEecCccccCcCCCcc-cccccCCCCCC-----------ccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHRT-DFYRDLSQAKP-----------SDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~~-~~~~~~~~~~~-----------~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+++........ ...++..+..|           .|.            +.+||.+.+..+....+......
T Consensus       227 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  306 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD  306 (373)
T ss_dssp             EEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred             cEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Confidence            9999999999865432211 11122222222           222            36899999999999888875433


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      +..+....++++++++|.+ |..+|.+|..    ++++.   .||||++..|...
T Consensus       307 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~e~l---~hp~~~~~~~~~~  354 (373)
T 2x4f_A          307 LEDEEFQDISEEAKEFISKLLIKEKSWRIS----ASEAL---KHPWLSDHKLHSR  354 (373)
T ss_dssp             SCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---HSHHHHCHHHHHH
T ss_pred             CChhhhccCCHHHHHHHHHHcCCChhhCCC----HHHHh---cCcCcCCCchhhh
Confidence            2222223579999999999 5579999996    56777   7899999887654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.86  E-value=1.4e-21  Score=195.55  Aligned_cols=175  Identities=27%  Similarity=0.410  Sum_probs=137.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---   80 (351)
                      +++.++..|++...+|+|||||+||+|.+.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.++   
T Consensus       107 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCS
T ss_pred             CCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCc
Confidence            45566778899999999999999999999998888899999999999999999999999999999999999998776   


Q ss_pred             cEEEEecCccccCcCCCc-ccccccCCCC----------CCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         81 HIKLSDFGLCTGLKKSHR-TDFYRDLSQA----------KPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-~~~~~~~~~~----------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      .+||+|||+++....... ....++..+.          ...|.            +.+||.+.+..++...+.......
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  266 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF  266 (504)
T ss_dssp             SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            699999999976543221 1111222222          22232            379999999999999998754333


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      ..+....+|++++++|.++ ..+|.+|.+    ++++.   .||||+..
T Consensus       267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~e~l---~h~~~~~~  308 (504)
T 3q5i_A          267 DFNDWKNISDEAKELIKLMLTYDYNKRCT----AEEAL---NSRWIKKY  308 (504)
T ss_dssp             CHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHH---TSHHHHHT
T ss_pred             CccccCCCCHHHHHHHHHHcCCChhHCCC----HHHHh---cCHhhhhc
Confidence            3333345899999999995 479999986    56777   88999754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=2e-21  Score=187.66  Aligned_cols=170  Identities=22%  Similarity=0.414  Sum_probs=127.0

Q ss_pred             ceEeeeEEEecC--CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDP--INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++.++..|++.  ..+|+|||||. |+|..++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.
T Consensus        70 niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~  147 (388)
T 3oz6_A           70 NIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH  147 (388)
T ss_dssp             TBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             CCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCC
Confidence            445556666644  47999999997 689998876 57999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccccCcCC----------------------------CcccccccC-------CCCCCccc------------C
Q psy17600         82 IKLSDFGLCTGLKKS----------------------------HRTDFYRDL-------SQAKPSDF------------S  114 (351)
Q Consensus        82 ~kl~DFGla~~~~~~----------------------------~~~~~~~~~-------~~~~~~~~------------~  114 (351)
                      +||+|||+|+.....                            ..+..|..+       .+....|+            +
T Consensus       148 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g  227 (388)
T 3oz6_A          148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG  227 (388)
T ss_dssp             EEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             EEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhC
Confidence            999999999754221                            112222221       12222333            3


Q ss_pred             CCCCCCCCHHHHHHHHHcCCCceeCC----------------------------------------------CCCCCCHH
Q psy17600        115 YPPFCSENPQETYRKVMSWRDTLVFP----------------------------------------------PEVPISEE  148 (351)
Q Consensus       115 ~~Pf~~~~~~~~~~~i~~~~~~~~~p----------------------------------------------~~~~~s~~  148 (351)
                      .+||.+.+....+..|...   +.+|                                              +....+++
T Consensus       228 ~~pf~~~~~~~~~~~i~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (388)
T 3oz6_A          228 KPIFPGSSTMNQLERIIGV---IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEE  304 (388)
T ss_dssp             SCSCCCSSHHHHHHHHHHH---HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHH
T ss_pred             CCCCCCCCHHHHHHHHHHh---cCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHH
Confidence            7999999988887777531   1111                                              11246899


Q ss_pred             HHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        149 ARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       149 ~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      +.++|.+++ .+|.+|++    ++++.   .||||+.+
T Consensus       305 ~~dll~~~L~~dP~~R~t----~~e~l---~Hp~~~~~  335 (388)
T 3oz6_A          305 ALDLLDKLLQFNPNKRIS----ANDAL---KHPFVSIF  335 (388)
T ss_dssp             HHHHHHHHCCSSGGGSCC----HHHHT---TSTTTTTT
T ss_pred             HHHHHHHhhccCcccCCC----HHHHh---CCHHHHHh
Confidence            999999955 79999997    56777   89998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.86  E-value=2.4e-22  Score=188.84  Aligned_cols=88  Identities=25%  Similarity=0.320  Sum_probs=78.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      ++..+..+.+...+|+||||++||+|.+++....    .+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus        97 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~  176 (321)
T 2qkw_B           97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF  176 (321)
T ss_dssp             BCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC
T ss_pred             EeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC
Confidence            4455566788889999999999999999886543    488999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccc
Q psy17600         81 HIKLSDFGLCTG   92 (351)
Q Consensus        81 ~~kl~DFGla~~   92 (351)
                      .+||+|||+++.
T Consensus       177 ~~kl~Dfg~~~~  188 (321)
T 2qkw_B          177 VPKITDFGISKK  188 (321)
T ss_dssp             CEEECCCTTCEE
T ss_pred             CEEEeecccccc
Confidence            999999999753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=9.1e-22  Score=185.29  Aligned_cols=85  Identities=22%  Similarity=0.333  Sum_probs=75.8

Q ss_pred             eeeEEEecC----CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeccCCCCcE
Q psy17600          7 LKQLRMSDP----INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL--------GFIHRDIKPDNL   74 (351)
Q Consensus         7 ~~~~~f~~~----~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~--------~iihrDlkp~Ni   74 (351)
                      ..+..+.+.    ..+|+|||||+||+|.+++... .+++..+..++.|++.||.|||++        ||+||||||+||
T Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Ni  173 (337)
T 3mdy_A           95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI  173 (337)
T ss_dssp             CEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGE
T ss_pred             eEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHE
Confidence            344445555    7899999999999999999764 699999999999999999999999        999999999999


Q ss_pred             EecCCCcEEEEecCcccc
Q psy17600         75 LLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~~   92 (351)
                      +++.++.+||+|||+++.
T Consensus       174 ll~~~~~~kl~Dfg~a~~  191 (337)
T 3mdy_A          174 LVKKNGTCCIADLGLAVK  191 (337)
T ss_dssp             EECTTSCEEECCCTTCEE
T ss_pred             EECCCCCEEEEeCCCcee
Confidence            999999999999999854

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.86  E-value=4.5e-22  Score=181.77  Aligned_cols=88  Identities=22%  Similarity=0.298  Sum_probs=80.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+++...+|+||||++||+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~  144 (268)
T 3sxs_A           65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVK  144 (268)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEE
T ss_pred             EeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEE
Confidence            4556667888899999999999999999997653 599999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       145 l~Dfg~~~~  153 (268)
T 3sxs_A          145 VSDFGMTRY  153 (268)
T ss_dssp             ECCTTCEEE
T ss_pred             EccCcccee
Confidence            999999753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.86  E-value=2.2e-21  Score=178.37  Aligned_cols=170  Identities=32%  Similarity=0.482  Sum_probs=132.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .++..+..+++...+|+||||+++|+|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.++
T Consensus        70 ~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~  149 (279)
T 3fdn_A           70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK  149 (279)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEE
T ss_pred             CCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEE
Confidence            34556667889999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcccccccCCC-----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCC
Q psy17600         84 LSDFGLCTGLKKSHRTDFYRDLSQ-----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFP  140 (351)
Q Consensus        84 l~DFGla~~~~~~~~~~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p  140 (351)
                      |+|||++............+...+           ....|.            +..||.+.+..+.+..+...  ...+|
T Consensus       150 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~  227 (279)
T 3fdn_A          150 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFP  227 (279)
T ss_dssp             ECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCC
T ss_pred             EEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC--CCCCC
Confidence            999999865443322222222222           222232            37899999999988888763  34455


Q ss_pred             CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        141 PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       141 ~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ..  ++++++++|.++ ..+|.+|..    ++++.   .||||++
T Consensus       228 ~~--~~~~~~~li~~~l~~~p~~Rps----~~e~l---~h~~~~~  263 (279)
T 3fdn_A          228 DF--VTEGARDLISRLLKHNPSQRPM----LREVL---EHPWITA  263 (279)
T ss_dssp             TT--SCHHHHHHHHHHCCSSGGGSCC----HHHHH---HCHHHHH
T ss_pred             Cc--CCHHHHHHHHHHhccChhhCCC----HHHHh---hCccccC
Confidence            43  789999999995 479999976    56777   7899975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.86  E-value=9.9e-22  Score=181.51  Aligned_cols=84  Identities=27%  Similarity=0.421  Sum_probs=75.7

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---cCCCcEEE
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---DARGHIKL   84 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---~~~~~~kl   84 (351)
                      ...+.+....|+||||+ +|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||
T Consensus        71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL  149 (296)
T 4hgt_A           71 RWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI  149 (296)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEE
T ss_pred             eeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEE
Confidence            34457788899999999 9999999974 4579999999999999999999999999999999999999   78899999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||+++..
T Consensus       150 ~Dfg~a~~~  158 (296)
T 4hgt_A          150 IDFGLAKKY  158 (296)
T ss_dssp             CCCTTCEEC
T ss_pred             ecCccceec
Confidence            999998643

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.86  E-value=5.4e-21  Score=175.84  Aligned_cols=179  Identities=23%  Similarity=0.395  Sum_probs=139.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc---
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH---   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~---   81 (351)
                      .+..+..+++....|+||||++||+|.+.+.....+++..+..++.|++.||.|||++||+||||||+||+++.++.   
T Consensus        67 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~  146 (284)
T 3kk8_A           67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA  146 (284)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCC
T ss_pred             cCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCc
Confidence            45566678899999999999999999999988888999999999999999999999999999999999999986655   


Q ss_pred             EEEEecCccccCcCCCc------ccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         82 IKLSDFGLCTGLKKSHR------TDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~------~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      +||+|||++........      +..|..+      .+....|.            +..||.+.+....+..+.......
T Consensus       147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  226 (284)
T 3kk8_A          147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY  226 (284)
T ss_dssp             EEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             EEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC
Confidence            99999999875543221      1112111      11222232            378999999999998888754444


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      ..|....+++++.++|.++ ..+|.+|..    ++++.   .||||++.++...
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l---~h~~~~~~~~~~~  273 (284)
T 3kk8_A          227 PSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQAL---KVPWICNRERVAS  273 (284)
T ss_dssp             CTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHT---TSHHHHSCCCGGG
T ss_pred             CchhhcccCHHHHHHHHHHcccChhhCCC----HHHHh---cCccccCChhHHh
Confidence            4444446899999999995 479999986    56666   8899998777654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.86  E-value=2.2e-22  Score=189.79  Aligned_cols=79  Identities=25%  Similarity=0.414  Sum_probs=71.8

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeccCCCCcEEecCCCcEEE
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL---------GFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---------~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +...+|+|||||+||+|.+++... ..++..+..++.|++.||.|||++         ||+||||||+|||++.++.+||
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             CCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence            445789999999999999999765 458888999999999999999999         9999999999999999999999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||+++.+
T Consensus       162 ~DFG~a~~~  170 (336)
T 3g2f_A          162 SDFGLSMRL  170 (336)
T ss_dssp             CCCTTCEEC
T ss_pred             eeccceeec
Confidence            999998654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.86  E-value=2.5e-22  Score=185.28  Aligned_cols=88  Identities=24%  Similarity=0.196  Sum_probs=79.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc-
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH-   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~-   81 (351)
                      .++..+..+.+....|+|||||.||+|.+++.+... +++..+..++.|++.||.|||++||+||||||+||+++.++. 
T Consensus        73 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  152 (289)
T 4fvq_A           73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDR  152 (289)
T ss_dssp             TBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBG
T ss_pred             CEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcc
Confidence            345566678888999999999999999999987654 899999999999999999999999999999999999998887 


Q ss_pred             -------EEEEecCccc
Q psy17600         82 -------IKLSDFGLCT   91 (351)
Q Consensus        82 -------~kl~DFGla~   91 (351)
                             +||+|||++.
T Consensus       153 ~~~~~~~~kl~Dfg~~~  169 (289)
T 4fvq_A          153 KTGNPPFIKLSDPGISI  169 (289)
T ss_dssp             GGTBCCEEEECCCCSCT
T ss_pred             cccccceeeeccCcccc
Confidence                   9999999863

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.86  E-value=4.1e-22  Score=183.44  Aligned_cols=89  Identities=20%  Similarity=0.361  Sum_probs=81.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .++..+..+++...+|+||||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~  159 (283)
T 3gen_A           80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVV  159 (283)
T ss_dssp             TBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCE
T ss_pred             CEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCE
Confidence            345566678889999999999999999999976 4679999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||++..
T Consensus       160 kl~Dfg~~~~  169 (283)
T 3gen_A          160 KVSDFGLSRY  169 (283)
T ss_dssp             EECSTTGGGG
T ss_pred             EEcccccccc
Confidence            9999999753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.86  E-value=4.1e-22  Score=187.32  Aligned_cols=88  Identities=24%  Similarity=0.306  Sum_probs=79.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCCCCcEEec
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKL---GFIHRDIKPDNLLLD   77 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~al~~lH~~---~iihrDlkp~Nill~   77 (351)
                      ++..+..+.+....|+|||||.||+|.+++....    .+++..+..++.|++.||.|||++   ||+||||||+||+++
T Consensus        89 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~  168 (326)
T 3uim_A           89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD  168 (326)
T ss_dssp             BCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred             ccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence            4455667888899999999999999999997543    389999999999999999999999   999999999999999


Q ss_pred             CCCcEEEEecCcccc
Q psy17600         78 ARGHIKLSDFGLCTG   92 (351)
Q Consensus        78 ~~~~~kl~DFGla~~   92 (351)
                      .++.+||+|||++..
T Consensus       169 ~~~~~kl~Dfg~~~~  183 (326)
T 3uim_A          169 EEFEAVVGDFGLAKL  183 (326)
T ss_dssp             TTCCEEECCCSSCEE
T ss_pred             CCCCEEeccCccccc
Confidence            999999999999753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.86  E-value=4.6e-21  Score=182.99  Aligned_cols=178  Identities=21%  Similarity=0.353  Sum_probs=129.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---CC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---RG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---~~   80 (351)
                      .++..+..|++...+|+||||++||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.   ++
T Consensus       109 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~  188 (349)
T 2w4o_A          109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA  188 (349)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTC
T ss_pred             CCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCC
Confidence            345566678899999999999999999999988888999999999999999999999999999999999999975   88


Q ss_pred             cEEEEecCccccCcCCC------cccccccC------CCCCCccc------------CCCCCCCCCHH-HHHHHHHcCCC
Q psy17600         81 HIKLSDFGLCTGLKKSH------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQ-ETYRKVMSWRD  135 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~-~~~~~i~~~~~  135 (351)
                      .+||+|||+++......      .+..|..+      .+....|.            +..||.+.+.. ..+..+.....
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~  268 (349)
T 2w4o_A          189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY  268 (349)
T ss_dssp             CEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC
T ss_pred             CEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC
Confidence            99999999987553321      11222211      12222332            26888766544 47778876543


Q ss_pred             ceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        136 TLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      ....|....++.+++++|.++ ..+|.+|..    +.++.   .||||.+..+.
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l---~hp~~~~~~~~  315 (349)
T 2w4o_A          269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQAL---QHPWVTGKAAN  315 (349)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---HSTTTTSTTCC
T ss_pred             ccCCchhhhCCHHHHHHHHHHccCChhhCcC----HHHHh---cCcccCCCccc
Confidence            333333345899999999994 579999987    56777   78999876543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.1e-21  Score=183.60  Aligned_cols=87  Identities=26%  Similarity=0.404  Sum_probs=79.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..+.+...+|+||||++|++|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        96 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl  175 (309)
T 2h34_A           96 VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYL  175 (309)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             eeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEE
Confidence            44556677888999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccc
Q psy17600         85 SDFGLCT   91 (351)
Q Consensus        85 ~DFGla~   91 (351)
                      +|||++.
T Consensus       176 ~Dfg~~~  182 (309)
T 2h34_A          176 VDFGIAS  182 (309)
T ss_dssp             CSCCC--
T ss_pred             ecCccCc
Confidence            9999974

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.85  E-value=8.7e-22  Score=193.34  Aligned_cols=87  Identities=25%  Similarity=0.399  Sum_probs=77.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      ..+..+..|.+...+|+||||+. |+|.+++....  .+++..++.++.|++.||.|||++||+||||||+|||++.++.
T Consensus       160 ~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~  238 (429)
T 3kvw_A          160 NVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR  238 (429)
T ss_dssp             CBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS
T ss_pred             CEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC
Confidence            34556667888899999999996 69999987654  4899999999999999999999999999999999999999987


Q ss_pred             --EEEEecCccc
Q psy17600         82 --IKLSDFGLCT   91 (351)
Q Consensus        82 --~kl~DFGla~   91 (351)
                        +||+|||++.
T Consensus       239 ~~vkL~DFG~a~  250 (429)
T 3kvw_A          239 SGIKVIDFGSSC  250 (429)
T ss_dssp             CCEEECCCTTCE
T ss_pred             cceEEeecccce
Confidence              9999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.85  E-value=7.1e-22  Score=181.21  Aligned_cols=77  Identities=16%  Similarity=0.294  Sum_probs=67.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      +++..+..+.+...+|+|||||+||+|.+++.+.    ..+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus        72 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~  151 (289)
T 1x8b_A           72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT  151 (289)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--
T ss_pred             CeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCC
Confidence            3455666788999999999999999999999764    678999999999999999999999999999999999999855


Q ss_pred             C
Q psy17600         80 G   80 (351)
Q Consensus        80 ~   80 (351)
                      +
T Consensus       152 ~  152 (289)
T 1x8b_A          152 S  152 (289)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.85  E-value=2.6e-22  Score=189.16  Aligned_cols=87  Identities=24%  Similarity=0.283  Sum_probs=76.0

Q ss_pred             eEeeeEEEecC----CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeeccCC
Q psy17600          5 ACLKQLRMSDP----INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL----------GFIHRDIK   70 (351)
Q Consensus         5 ~~~~~~~f~~~----~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~----------~iihrDlk   70 (351)
                      ++..+..+.+.    ..+|+|||||++|+|.+++.. ..+++..+..++.|++.||.|||+.          ||+|||||
T Consensus        80 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlk  158 (322)
T 3soc_A           80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK  158 (322)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCS
T ss_pred             chhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCC
Confidence            34444555553    348999999999999999976 4599999999999999999999999          99999999


Q ss_pred             CCcEEecCCCcEEEEecCcccc
Q psy17600         71 PDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        71 p~Nill~~~~~~kl~DFGla~~   92 (351)
                      |+|||++.++.+||+|||+++.
T Consensus       159 p~Nill~~~~~~kL~DFg~a~~  180 (322)
T 3soc_A          159 SKNVLLKNNLTACIADFGLALK  180 (322)
T ss_dssp             GGGEEECTTCCEEECCCTTCEE
T ss_pred             hHhEEECCCCeEEEccCCcccc
Confidence            9999999999999999999854

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.85  E-value=4e-21  Score=177.09  Aligned_cols=169  Identities=28%  Similarity=0.477  Sum_probs=134.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+++...+|+||||+++|+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        76 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  155 (284)
T 2vgo_A           76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKI  155 (284)
T ss_dssp             BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEE
T ss_pred             EeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEE
Confidence            44556678889999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCccc-----cccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         85 SDFGLCTGLKKSHRTD-----FYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        85 ~DFGla~~~~~~~~~~-----~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      +|||++..........     .|..      ..+....|.            +..||...+..+....+...  ...+|.
T Consensus       156 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~  233 (284)
T 2vgo_A          156 ADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP  233 (284)
T ss_dssp             CCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCT
T ss_pred             ecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--ccCCCC
Confidence            9999986543322111     1211      111222232            36899999988888888863  345554


Q ss_pred             CCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        142 EVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       142 ~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .  ++++.+++|.+++ .+|.+|..    ++++.   .||||+.
T Consensus       234 ~--~~~~~~~li~~~l~~~p~~Rps----~~~ll---~h~~~~~  268 (284)
T 2vgo_A          234 F--LSDGSKDLISKLLRYHPPQRLP----LKGVM---EHPWVKA  268 (284)
T ss_dssp             T--SCHHHHHHHHHHSCSSGGGSCC----HHHHH---TCHHHHH
T ss_pred             c--CCHHHHHHHHHHhhcCHhhCCC----HHHHh---hCHHHHh
Confidence            3  7899999999955 79999986    56777   8899974

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.85  E-value=5.1e-21  Score=177.25  Aligned_cols=174  Identities=20%  Similarity=0.338  Sum_probs=125.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l-~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..|++...+|+|||||.| +|...+ ...+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        62 ~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~  140 (292)
T 3o0g_A           62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL  140 (292)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             CEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence            345566778899999999999986 555544 446789999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccCC-------CCCCcccC-------------CCCCCCCCHHHHHHHHHcCCC
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDLS-------QAKPSDFS-------------YPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~~-------~~~~~~~~-------------~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                      ||+|||+++......       .+..|..+.       +....|.|             .|+|.+.+..+....+.....
T Consensus       141 kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~  220 (292)
T 3o0g_A          141 KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG  220 (292)
T ss_dssp             EECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHC
T ss_pred             EEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC
Confidence            999999997553221       122222211       22223321             456777777777766653211


Q ss_pred             ce---------------eCC----------CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        136 TL---------------VFP----------PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       136 ~~---------------~~p----------~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      ..               .+|          ....++++++++|.++ ..+|.+|.+    ++++.   .||||+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~f~~~  289 (292)
T 3o0g_A          221 TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEAL---QHPYFSDF  289 (292)
T ss_dssp             CCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGTTC
T ss_pred             CCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC----HHHHh---cCcccccC
Confidence            10               000          0113689999999995 579999986    56777   88999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.85  E-value=2e-22  Score=186.76  Aligned_cols=79  Identities=25%  Similarity=0.414  Sum_probs=72.5

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeccCCCCcEEecCCCcEEE
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH--------KLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH--------~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++...+|+||||+++|+|.+++. ...+++..+..++.|++.||.|||        +++|+||||||+|||++.++.+||
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             CCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence            34567999999999999999995 457999999999999999999999        999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+++.
T Consensus       155 ~Dfg~a~~  162 (301)
T 3q4u_A          155 ADLGLAVM  162 (301)
T ss_dssp             CCCTTCEE
T ss_pred             eeCCCeee
Confidence            99999853

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.85  E-value=6.9e-22  Score=180.80  Aligned_cols=89  Identities=20%  Similarity=0.243  Sum_probs=80.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.+..+..+.+...+|+||||++||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        66 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  145 (269)
T 4hcu_A           66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI  145 (269)
T ss_dssp             TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCE
T ss_pred             CEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCE
Confidence            3455666788899999999999999999999754 468999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       146 kl~Dfg~~~~  155 (269)
T 4hcu_A          146 KVSDFGMTRF  155 (269)
T ss_dssp             EECCTTGGGG
T ss_pred             Eecccccccc
Confidence            9999999753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.85  E-value=5.2e-22  Score=185.02  Aligned_cols=89  Identities=24%  Similarity=0.250  Sum_probs=80.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD------------------TLSEECTQFYIAETALAIDSIHKLGFI   65 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~------------------~l~e~~~~~~~~qi~~al~~lH~~~ii   65 (351)
                      .++..+..+.+...+|+|||||++|+|.+++....                  .+++..+..++.|++.||.|||++||+
T Consensus        88 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  167 (313)
T 1t46_A           88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI  167 (313)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            34555667888899999999999999999998654                  389999999999999999999999999


Q ss_pred             eccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         66 HRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        66 hrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||||+||+++.++.+||+|||++..
T Consensus       168 H~dlkp~Nil~~~~~~~kl~Dfg~~~~  194 (313)
T 1t46_A          168 HRDLAARNILLTHGRITKICDFGLARD  194 (313)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSC
T ss_pred             cCCCccceEEEcCCCCEEEcccccccc
Confidence            999999999999999999999999753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.85  E-value=8.7e-22  Score=187.66  Aligned_cols=79  Identities=18%  Similarity=0.365  Sum_probs=73.7

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC--cEEEEecCc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG--HIKLSDFGL   89 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~--~~kl~DFGl   89 (351)
                      +...+|+||||| ||+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+
T Consensus       129 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~  207 (352)
T 2jii_A          129 QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGF  207 (352)
T ss_dssp             TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGG
T ss_pred             CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcc
Confidence            467899999999 99999999876  7899999999999999999999999999999999999999998  899999999


Q ss_pred             cccC
Q psy17600         90 CTGL   93 (351)
Q Consensus        90 a~~~   93 (351)
                      ++.+
T Consensus       208 a~~~  211 (352)
T 2jii_A          208 AFRY  211 (352)
T ss_dssp             CBCS
T ss_pred             eeec
Confidence            8644

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.85  E-value=6e-22  Score=190.95  Aligned_cols=89  Identities=20%  Similarity=0.343  Sum_probs=76.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .++..+..+.+...+|+|||||+||+|.+++.+.+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus       107 niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  186 (373)
T 2qol_A          107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVC  186 (373)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             CCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCE
Confidence            34556667888889999999999999999998654 68999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       187 kl~Dfg~a~~  196 (373)
T 2qol_A          187 KVSDFGLGRV  196 (373)
T ss_dssp             EECCC-----
T ss_pred             EECcCccccc
Confidence            9999999753

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.85  E-value=2.6e-21  Score=178.90  Aligned_cols=84  Identities=27%  Similarity=0.421  Sum_probs=74.9

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---cCCCcEEE
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---DARGHIKL   84 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---~~~~~~kl   84 (351)
                      ...+.+...+|+||||+ +|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||
T Consensus        71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl  149 (296)
T 3uzp_A           71 RWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI  149 (296)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEE
T ss_pred             ccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEE
Confidence            34456778899999999 9999999974 4579999999999999999999999999999999999999   48899999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||++...
T Consensus       150 ~Dfg~~~~~  158 (296)
T 3uzp_A          150 IDFGLAKKY  158 (296)
T ss_dssp             CCCTTCEEC
T ss_pred             eeCCCcccc
Confidence            999998643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.85  E-value=2.5e-22  Score=193.68  Aligned_cols=88  Identities=24%  Similarity=0.425  Sum_probs=79.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+.+...+|+|||||+||+|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus       173 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~  252 (377)
T 3cbl_A          173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVL  252 (377)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             CEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcE
Confidence            34556667888889999999999999999997643 58999999999999999999999999999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||+++
T Consensus       253 kl~DfG~s~  261 (377)
T 3cbl_A          253 KISDFGMSR  261 (377)
T ss_dssp             EECCGGGCE
T ss_pred             EECcCCCce
Confidence            999999975

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.85  E-value=4.3e-22  Score=183.49  Aligned_cols=82  Identities=26%  Similarity=0.449  Sum_probs=69.8

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      .+.+...+|+||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  162 (281)
T 1mp8_A           83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  162 (281)
T ss_dssp             EEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---
T ss_pred             EEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccc
Confidence            3345678999999999999999997654 689999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      ++.
T Consensus       163 ~~~  165 (281)
T 1mp8_A          163 SRY  165 (281)
T ss_dssp             ---
T ss_pred             ccc
Confidence            753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.85  E-value=6.5e-22  Score=186.35  Aligned_cols=88  Identities=30%  Similarity=0.442  Sum_probs=80.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      +++..+..+++...+|+||||++||+|.+++.+..                .+++..+..++.|++.||.|||++||+||
T Consensus        87 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  166 (327)
T 1fvr_A           87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  166 (327)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             chhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCC
Confidence            34556667889999999999999999999997654                68999999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ||||+||+++.++.+||+|||+++
T Consensus       167 dlkp~NIl~~~~~~~kL~Dfg~~~  190 (327)
T 1fvr_A          167 DLAARNILVGENYVAKIADFGLSR  190 (327)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEE
T ss_pred             CCccceEEEcCCCeEEEcccCcCc
Confidence            999999999999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.85  E-value=5.7e-21  Score=187.53  Aligned_cols=89  Identities=29%  Similarity=0.422  Sum_probs=78.3

Q ss_pred             eEeeeEEEecC-----CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          5 ACLKQLRMSDP-----INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         5 ~~~~~~~f~~~-----~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      ++.++..+.+.     ..+|+||||+. |+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        87 Iv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~  165 (432)
T 3n9x_A           87 IIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD  165 (432)
T ss_dssp             BCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             cceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCC
Confidence            34445555554     67999999986 6999999888889999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCccccCc
Q psy17600         80 GHIKLSDFGLCTGLK   94 (351)
Q Consensus        80 ~~~kl~DFGla~~~~   94 (351)
                      +.+||+|||+|+...
T Consensus       166 ~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          166 CSVKVCDFGLARTIN  180 (432)
T ss_dssp             CCEEECCCTTCEEC-
T ss_pred             CCEEEccCCCccccc
Confidence            999999999997643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.85  E-value=2.2e-22  Score=193.77  Aligned_cols=73  Identities=18%  Similarity=0.307  Sum_probs=66.5

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCCCH-------HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         18 LYLIMEFLPGGDMMTLLMKKDTLSE-------ECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~~~l~e-------~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      .||||||| +|+|.+++.+.+.+++       ..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a  253 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhh
Confidence            89999999 6899999987655655       677779999999999999999999999999999999999999999997


Q ss_pred             c
Q psy17600         91 T   91 (351)
Q Consensus        91 ~   91 (351)
                      +
T Consensus       254 ~  254 (377)
T 3byv_A          254 V  254 (377)
T ss_dssp             E
T ss_pred             e
Confidence            5

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=3.2e-21  Score=182.65  Aligned_cols=178  Identities=20%  Similarity=0.320  Sum_probs=137.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHH------HHh--CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTL------LMK--KDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLL   75 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~------l~~--~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nil   75 (351)
                      .+..+..+++...+|+||||++||+|.++      +.+  ...+++..+..++.|++.||.|||+ +||+||||||+||+
T Consensus       105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil  184 (348)
T 2pml_X          105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL  184 (348)
T ss_dssp             BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred             cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence            34455668889999999999999999998      655  5679999999999999999999999 99999999999999


Q ss_pred             ecCCCcEEEEecCccccCcCCC-----cccccccCCC-------CC-Cccc------------CCCCCCCCCH-HHHHHH
Q psy17600         76 LDARGHIKLSDFGLCTGLKKSH-----RTDFYRDLSQ-------AK-PSDF------------SYPPFCSENP-QETYRK  129 (351)
Q Consensus        76 l~~~~~~kl~DFGla~~~~~~~-----~~~~~~~~~~-------~~-~~~~------------~~~Pf~~~~~-~~~~~~  129 (351)
                      ++.++.+||+|||++.......     .+..|..+..       .. ..|.            +.+||.+.+. .+....
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  264 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN  264 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred             EcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            9999999999999987643321     1222222211       11 2222            3689988776 777888


Q ss_pred             HHcCCCceeCCCC-----------------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhh
Q psy17600        130 VMSWRDTLVFPPE-----------------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR  191 (351)
Q Consensus       130 i~~~~~~~~~p~~-----------------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~  191 (351)
                      +...  ...+|..                 ..+++++.++|.++ ..+|.+|..    ++++.   .||||++++|+.+.
T Consensus       265 i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps----~~e~l---~hp~f~~~~~~~~~  335 (348)
T 2pml_X          265 IRTK--NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT----SEDAL---KHEWLADTNIEDLR  335 (348)
T ss_dssp             HTSC--CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC----HHHHH---TSGGGTTCCHHHHH
T ss_pred             Hhcc--CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC----HHHHh---cCccccCCCHHHHH
Confidence            7764  3444521                 34789999999995 479999986    56777   88999999999874

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.85  E-value=4.8e-21  Score=177.94  Aligned_cols=169  Identities=30%  Similarity=0.466  Sum_probs=129.9

Q ss_pred             eEeeeEEEec--CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSD--PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~--~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ++..+..+.+  ...+|+||||+++|+|.+++ ....+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  176 (298)
T 2zv2_A           98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHI  176 (298)
T ss_dssp             BCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred             CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCE
Confidence            3444555665  56899999999999998765 34579999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccCCCC---------CCccc------------CCCCCCCCCHHHHHHHHHcCC
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDLSQA---------KPSDF------------SYPPFCSENPQETYRKVMSWR  134 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~~~~---------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~  134 (351)
                      ||+|||+++......       .+..|..+...         ...|.            +..||.+.+.......+..  
T Consensus       177 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--  254 (298)
T 2zv2_A          177 KIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS--  254 (298)
T ss_dssp             EECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--
T ss_pred             EEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhc--
Confidence            999999997654321       12223222211         11232            3689999988888888776  


Q ss_pred             CceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        135 DTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       135 ~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      ....+|....++++++++|.+ |..+|.+|..    ++++.   .||||+
T Consensus       255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s----~~e~l---~hp~~~  297 (298)
T 2zv2_A          255 QALEFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIK---LHPWVT  297 (298)
T ss_dssp             CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHT---TCHHHH
T ss_pred             ccCCCCCccccCHHHHHHHHHHhhcChhhCCC----HHHHh---cCcccc
Confidence            345566555689999999999 5579999986    56666   889985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.85  E-value=4.6e-21  Score=184.05  Aligned_cols=173  Identities=25%  Similarity=0.368  Sum_probs=135.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..+++...+|+||||++||+|.+++.....+++..+..++.|++.||.|||+.||+||||||+||+++.+|.+|
T Consensus       161 ~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             TBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             CEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence            34455667888999999999999999999998878899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc------ccccccC------------CCCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSHR------TDFYRDL------------SQAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~------~~~~~~~------------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||++..+.....      +..|..+            .+....|.            +.+||.+.+.......+...
T Consensus       241 l~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~  320 (365)
T 2y7j_A          241 LSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG  320 (365)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            999999876543221      2222211            12222332            36899999988888888775


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        134 RDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      ......|.....+.++.++|.+++ .+|.+|..    ++++.   .||||+
T Consensus       321 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell---~hp~f~  364 (365)
T 2y7j_A          321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQAL---QHPFFE  364 (365)
T ss_dssp             CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCC----HHHHH---HSGGGC
T ss_pred             CCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHh---cCcccC
Confidence            433333322357889999999954 79999986    56777   789997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=1.2e-21  Score=188.27  Aligned_cols=74  Identities=36%  Similarity=0.698  Sum_probs=69.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+ |++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence            3569999999 8999999876 579999999999999999999999999999999999999999999999999975

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.85  E-value=7.1e-22  Score=186.54  Aligned_cols=86  Identities=22%  Similarity=0.408  Sum_probs=75.9

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+ ...++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus        80 v~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl  158 (327)
T 3poz_A           80 CRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI  158 (327)
T ss_dssp             CCEEEEEES-SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEE
T ss_pred             eEEEEEEec-CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEE
Confidence            344444554 458999999999999999986 457899999999999999999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+++.
T Consensus       159 ~Dfg~a~~  166 (327)
T 3poz_A          159 TDFGLAKL  166 (327)
T ss_dssp             CCTTHHHH
T ss_pred             ccCcceeE
Confidence            99999753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.85  E-value=1.5e-21  Score=184.29  Aligned_cols=88  Identities=28%  Similarity=0.400  Sum_probs=80.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .++..+..+++...+|+||||+.+++|..++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        85 ~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~k  164 (331)
T 4aaa_A           85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVK  164 (331)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             CEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEE
Confidence            34556667889999999999999999999888778899999999999999999999999999999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       165 l~Dfg~~~  172 (331)
T 4aaa_A          165 LCDFGFAR  172 (331)
T ss_dssp             ECCCTTC-
T ss_pred             EEeCCCce
Confidence            99999974

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.85  E-value=1.7e-21  Score=178.87  Aligned_cols=78  Identities=29%  Similarity=0.514  Sum_probs=72.0

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...+|+|||||++|+|.+++.+.  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  171 (284)
T 2a19_B           92 TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTS  171 (284)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             cceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhee
Confidence            45689999999999999999754  5789999999999999999999999999999999999999999999999999753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=1.3e-21  Score=188.20  Aligned_cols=77  Identities=23%  Similarity=0.446  Sum_probs=63.8

Q ss_pred             eEeeeEEEe----cCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEec
Q psy17600          5 ACLKQLRMS----DPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLD   77 (351)
Q Consensus         5 ~~~~~~~f~----~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~   77 (351)
                      .+..+..|.    +...+|+||||+ +|+|.+.+.+.  ..+++..++.++.|++.||.|||++ ||+||||||+|||++
T Consensus       103 iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~  181 (397)
T 1wak_A          103 VVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS  181 (397)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEEC
T ss_pred             eeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEe
Confidence            344455565    567899999999 66777766554  4699999999999999999999998 999999999999999


Q ss_pred             CCCcE
Q psy17600         78 ARGHI   82 (351)
Q Consensus        78 ~~~~~   82 (351)
                      .++..
T Consensus       182 ~~~~~  186 (397)
T 1wak_A          182 VNEQY  186 (397)
T ss_dssp             CCHHH
T ss_pred             ccchh
Confidence            87643

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.85  E-value=1.4e-21  Score=184.86  Aligned_cols=88  Identities=20%  Similarity=0.299  Sum_probs=79.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHRD   68 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihrD   68 (351)
                      ++..+..+.+...+|+||||++||+|.+++....                .+++..+..++.|++.||.|||++||+|||
T Consensus       103 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  182 (334)
T 2pvf_A          103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRD  182 (334)
T ss_dssp             BCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            4555667888899999999999999999998653                388999999999999999999999999999


Q ss_pred             CCCCcEEecCCCcEEEEecCcccc
Q psy17600         69 IKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        69 lkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |||+||+++.++.+||+|||+++.
T Consensus       183 lkp~NIll~~~~~~kL~Dfg~~~~  206 (334)
T 2pvf_A          183 LAARNVLVTENNVMKIADFGLARD  206 (334)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CccceEEEcCCCCEEEcccccccc
Confidence            999999999999999999999753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.85  E-value=1.6e-21  Score=192.61  Aligned_cols=86  Identities=23%  Similarity=0.457  Sum_probs=75.3

Q ss_pred             EeeeEEEe-cCCcEEEEEecCCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          6 CLKQLRMS-DPINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         6 ~~~~~~f~-~~~~lylVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +..+..+. +...+|+|||||+||+|.+++.+.+.  +++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus       249 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~  328 (450)
T 1k9a_A          249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA  328 (450)
T ss_dssp             CCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCE
T ss_pred             EEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCE
Confidence            34444443 44589999999999999999986543  7899999999999999999999999999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||+++
T Consensus       329 kl~DfG~a~  337 (450)
T 1k9a_A          329 KVSDFGLTK  337 (450)
T ss_dssp             EECCCTTCE
T ss_pred             EEeeCCCcc
Confidence            999999975

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.85  E-value=2.6e-21  Score=192.89  Aligned_cols=84  Identities=26%  Similarity=0.410  Sum_probs=75.5

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---cCCCcEEE
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---DARGHIKL   84 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---~~~~~~kl   84 (351)
                      ...+.+....||||||| |++|.+++.. ...+++..+..++.||+.||.|||++|||||||||+|||+   +.++.+||
T Consensus        69 ~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL  147 (483)
T 3sv0_A           69 RWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI  147 (483)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEE
T ss_pred             EEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEE
Confidence            34456778899999999 9999999975 4679999999999999999999999999999999999999   58899999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||+++..
T Consensus       148 ~DFGla~~~  156 (483)
T 3sv0_A          148 IDFGLAKKY  156 (483)
T ss_dssp             CCCTTCEEC
T ss_pred             EeCCcceec
Confidence            999998644

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.85  E-value=2.1e-21  Score=185.42  Aligned_cols=87  Identities=28%  Similarity=0.374  Sum_probs=77.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .++..+..+.+...+|+|||||. |+|.+.+. ....+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus       115 niv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  193 (348)
T 1u5q_A          115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV  193 (348)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEE
T ss_pred             CEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCE
Confidence            34556667888999999999997 57777775 45679999999999999999999999999999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||++.
T Consensus       194 kL~DfG~a~  202 (348)
T 1u5q_A          194 KLGDFGSAS  202 (348)
T ss_dssp             EECCCTTCB
T ss_pred             EEeeccCce
Confidence            999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.85  E-value=1.1e-20  Score=177.55  Aligned_cols=179  Identities=21%  Similarity=0.325  Sum_probs=131.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD   77 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~   77 (351)
                      +++..+..|++...+|+|||||. |+|.+++...      ..+++..++.++.|++.||.|||++||+||||||+||+++
T Consensus        64 ~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~  142 (317)
T 2pmi_A           64 NIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN  142 (317)
T ss_dssp             TBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             CcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc
Confidence            45566677889999999999998 5999988653      3589999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHH
Q psy17600         78 ARGHIKLSDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVM  131 (351)
Q Consensus        78 ~~~~~kl~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~  131 (351)
                      .++.+||+|||+++......       .+..|..+       .+....|.            +.+||.+.+..+....+.
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  222 (317)
T 2pmi_A          143 KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF  222 (317)
T ss_dssp             TTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            99999999999997643211       12222211       12222332            378999998888777765


Q ss_pred             cCCCce---------eCC---------------------CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCC
Q psy17600        132 SWRDTL---------VFP---------------------PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQ  180 (351)
Q Consensus       132 ~~~~~~---------~~p---------------------~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~  180 (351)
                      ...+..         ..|                     ....++++++++|.++ ..+|.+|.+    ++++.   .||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l---~hp  295 (317)
T 2pmi_A          223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS----AKQAL---HHP  295 (317)
T ss_dssp             HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCC----HHHHT---TSG
T ss_pred             HHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCC----HHHHh---CCh
Confidence            321100         000                     0114788999999994 579999996    56776   899


Q ss_pred             CccCCCchhh
Q psy17600        181 FFRGVDWDHI  190 (351)
Q Consensus       181 ff~~idw~~l  190 (351)
                      ||++..|.+.
T Consensus       296 ~f~~~~~~~~  305 (317)
T 2pmi_A          296 WFAEYYHHAS  305 (317)
T ss_dssp             GGGGGCC---
T ss_pred             hhhcccchhh
Confidence            9998887654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.85  E-value=6e-22  Score=183.60  Aligned_cols=79  Identities=29%  Similarity=0.508  Sum_probs=72.3

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+|||||+||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            3466999999999999999998754 489999999999999999999999999999999999999999999999999753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.84  E-value=2.3e-21  Score=187.04  Aligned_cols=87  Identities=29%  Similarity=0.408  Sum_probs=76.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH--HCCCeeccCCCCcEEec--
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIH--KLGFIHRDIKPDNLLLD--   77 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH--~~~iihrDlkp~Nill~--   77 (351)
                      +.+..+..|.+...+|+||||+. |+|.+++...  ..+++..++.++.|++.||.|||  ..||+||||||+|||++  
T Consensus       117 ~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~  195 (382)
T 2vx3_A          117 YIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP  195 (382)
T ss_dssp             GBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST
T ss_pred             eEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC
Confidence            35566677888999999999996 5999999765  45899999999999999999999  57999999999999995  


Q ss_pred             CCCcEEEEecCccc
Q psy17600         78 ARGHIKLSDFGLCT   91 (351)
Q Consensus        78 ~~~~~kl~DFGla~   91 (351)
                      .++.+||+|||+++
T Consensus       196 ~~~~~kL~DFG~a~  209 (382)
T 2vx3_A          196 KRSAIKIVDFGSSC  209 (382)
T ss_dssp             TSCCEEECCCTTCE
T ss_pred             CCCcEEEEeccCce
Confidence            47889999999975

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.84  E-value=1e-21  Score=196.25  Aligned_cols=89  Identities=22%  Similarity=0.362  Sum_probs=80.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .++.++..+.+...+|||||||+||+|.+++.+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.
T Consensus       277 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~  356 (495)
T 1opk_A          277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL  356 (495)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC
T ss_pred             CEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc
Confidence            3455666788888999999999999999999864  45899999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccc
Q psy17600         82 IKLSDFGLCTG   92 (351)
Q Consensus        82 ~kl~DFGla~~   92 (351)
                      +||+|||+++.
T Consensus       357 ~kl~DFG~a~~  367 (495)
T 1opk_A          357 VKVADFGLSRL  367 (495)
T ss_dssp             EEECCTTCEEC
T ss_pred             EEEeeccccee
Confidence            99999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.84  E-value=6.5e-22  Score=184.63  Aligned_cols=88  Identities=28%  Similarity=0.388  Sum_probs=76.4

Q ss_pred             eEeeeEEEecC-CcEEEEEecCCCCCHHHHHHhCCC----------------CCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          5 ACLKQLRMSDP-INLYLIMEFLPGGDMMTLLMKKDT----------------LSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         5 ~~~~~~~f~~~-~~lylVmEy~~gg~L~~~l~~~~~----------------l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      ++..+..+.+. ..+|+|||||+||+|.+++.....                +++..+..++.|++.||.|||++||+||
T Consensus        93 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~  172 (316)
T 2xir_A           93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR  172 (316)
T ss_dssp             BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             eeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence            34444455554 459999999999999999986543                8899999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCcccc
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||+||+++.++.+||+|||+++.
T Consensus       173 dikp~Nil~~~~~~~kl~Dfg~~~~  197 (316)
T 2xir_A          173 DLAARNILLSEKNVVKICDFGLARD  197 (316)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSC
T ss_pred             cCccceEEECCCCCEEECCCccccc
Confidence            9999999999999999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.84  E-value=7.9e-21  Score=174.29  Aligned_cols=172  Identities=24%  Similarity=0.400  Sum_probs=133.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---cCCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---DARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---~~~~   80 (351)
                      .++..+..+++...+|+||||++|++|.+++.....+++..+..++.|++.||.|||++||+||||||+||++   +.++
T Consensus        67 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  146 (277)
T 3f3z_A           67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS  146 (277)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC
T ss_pred             CEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCC
Confidence            3455667788999999999999999999999888889999999999999999999999999999999999999   7889


Q ss_pred             cEEEEecCccccCcCCCcc-cccccCCC----------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         81 HIKLSDFGLCTGLKKSHRT-DFYRDLSQ----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~~-~~~~~~~~----------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      .+||+|||++......... ....+..+          ....|.            +..||.+.+..+....+....  .
T Consensus       147 ~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~  224 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGT--F  224 (277)
T ss_dssp             CEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--C
T ss_pred             cEEEEecccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--C
Confidence            9999999998755432211 11111111          222232            378999999988888887643  3


Q ss_pred             eCCCC--CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 VFPPE--VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ~~p~~--~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      .+|..  ..+++++.++|.++ ..+|.+|..    +.++.   .||||+.
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~l---~h~~~~~  267 (277)
T 3f3z_A          225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQAL---EHEWFEK  267 (277)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHT---TSHHHHH
T ss_pred             CCCchhhhcCCHHHHHHHHHHccCChhhCcC----HHHHh---cCHHHhc
Confidence            33322  24789999999995 579999987    45666   8899974

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.84  E-value=6.2e-22  Score=186.65  Aligned_cols=89  Identities=24%  Similarity=0.296  Sum_probs=79.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--------------DTLSEECTQFYIAETALAIDSIHKLGFIHRDI   69 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDl   69 (351)
                      +++..+..+.+...+|+|||||++|+|.+++...              ..+++..+..++.|++.||.|||++||+||||
T Consensus       111 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  190 (333)
T 2i1m_A          111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV  190 (333)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             CeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCc
Confidence            3455666788889999999999999999998742              35789999999999999999999999999999


Q ss_pred             CCCcEEecCCCcEEEEecCcccc
Q psy17600         70 KPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        70 kp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||+||+++.++.+||+|||++..
T Consensus       191 kp~NIl~~~~~~~kl~Dfg~~~~  213 (333)
T 2i1m_A          191 AARNVLLTNGHVAKIGDFGLARD  213 (333)
T ss_dssp             SGGGCEEEGGGEEEBCCCGGGCC
T ss_pred             ccceEEECCCCeEEECccccccc
Confidence            99999999999999999999753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.84  E-value=1.2e-20  Score=174.58  Aligned_cols=175  Identities=20%  Similarity=0.297  Sum_probs=127.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+++...+|+||||+.+ +|.+++... +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        61 ~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  139 (288)
T 1ob3_A           61 NIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL  139 (288)
T ss_dssp             TBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred             CEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCE
Confidence            345566778899999999999985 999988764 679999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      ||+|||+++......       .+..|..+       .+....|.            +.+||.+.+..+....+......
T Consensus       140 kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  219 (288)
T 1ob3_A          140 KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT  219 (288)
T ss_dssp             EECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             EEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCC
Confidence            999999987543211       12222211       12222332            36899998887777666431110


Q ss_pred             e----------------eCCC---------CCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCC
Q psy17600        137 L----------------VFPP---------EVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVD  186 (351)
Q Consensus       137 ~----------------~~p~---------~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~id  186 (351)
                      .                .++.         ...++++++++|.++ ..+|.+|.+    ++++.   .||||++.|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l---~hp~f~~~n  288 (288)
T 1ob3_A          220 PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQAL---EHAYFKENN  288 (288)
T ss_dssp             CCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHH---TSGGGGC--
T ss_pred             CChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC----HHHHh---cCcchhhcC
Confidence            0                0000         013689999999994 579999986    56777   889998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.84  E-value=8.1e-22  Score=202.81  Aligned_cols=88  Identities=22%  Similarity=0.331  Sum_probs=78.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++.++..++ ...+|+|||||+||+|.+++.....+++..+..++.||+.||.|||++|||||||||+|||++.++.+||
T Consensus       432 Iv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL  510 (635)
T 4fl3_A          432 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI  510 (635)
T ss_dssp             BCCEEEEEE-SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             EeeEEEEEe-cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEE
Confidence            344444454 5669999999999999999998888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||+++.+
T Consensus       511 ~DFGla~~~  519 (635)
T 4fl3_A          511 SDFGLSKAL  519 (635)
T ss_dssp             CCTTHHHHT
T ss_pred             EEcCCcccc
Confidence            999998643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.84  E-value=1.6e-21  Score=180.97  Aligned_cols=87  Identities=25%  Similarity=0.466  Sum_probs=76.3

Q ss_pred             EeeeEEEecC--CcEEEEEecCCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          6 CLKQLRMSDP--INLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         6 ~~~~~~f~~~--~~lylVmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +..+..+.+.  ..+|+||||++||+|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        86 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  165 (302)
T 4e5w_A           86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV  165 (302)
T ss_dssp             CCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             eeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCE
Confidence            3344455555  77999999999999999995 44679999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||++..
T Consensus       166 kl~Dfg~~~~  175 (302)
T 4e5w_A          166 KIGDFGLTKA  175 (302)
T ss_dssp             EECCCTTCEE
T ss_pred             EECccccccc
Confidence            9999999754

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.84  E-value=3.3e-21  Score=185.30  Aligned_cols=83  Identities=24%  Similarity=0.494  Sum_probs=70.8

Q ss_pred             EeeeEEEecCC------cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          6 CLKQLRMSDPI------NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         6 ~~~~~~f~~~~------~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      +..+..|.+..      .+|+|||||.| +|.+.+.  ..+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus        87 v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~  163 (371)
T 2xrw_A           87 IGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD  163 (371)
T ss_dssp             CCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             cceEEeeccccccccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC
Confidence            34444555544      78999999975 7888875  458999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCccc
Q psy17600         80 GHIKLSDFGLCT   91 (351)
Q Consensus        80 ~~~kl~DFGla~   91 (351)
                      +.+||+|||+++
T Consensus       164 ~~~kl~Dfg~a~  175 (371)
T 2xrw_A          164 CTLKILDFGLAR  175 (371)
T ss_dssp             SCEEECCCCC--
T ss_pred             CCEEEEEeeccc
Confidence            999999999974

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2e-21  Score=184.00  Aligned_cols=88  Identities=22%  Similarity=0.314  Sum_probs=78.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+.+...+|+|||||+||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~k  187 (333)
T 1mqb_A          108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCK  187 (333)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred             CCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEE
Confidence            445566788889999999999999999999764 5799999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       188 l~Dfg~~~~  196 (333)
T 1mqb_A          188 VSDFGLSRV  196 (333)
T ss_dssp             ECCCCC---
T ss_pred             ECCCCcchh
Confidence            999999753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.84  E-value=1.1e-21  Score=181.67  Aligned_cols=85  Identities=26%  Similarity=0.416  Sum_probs=73.1

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      ..++.+.+...+|+|||||.|++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+
T Consensus        83 v~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~  162 (289)
T 3og7_A           83 LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG  162 (289)
T ss_dssp             CCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred             EEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEc
Confidence            344557788889999999999999999954 3568999999999999999999999999999999999999999999999


Q ss_pred             ecCccc
Q psy17600         86 DFGLCT   91 (351)
Q Consensus        86 DFGla~   91 (351)
                      |||++.
T Consensus       163 Dfg~~~  168 (289)
T 3og7_A          163 DFGLAT  168 (289)
T ss_dssp             CCC---
T ss_pred             cceecc
Confidence            999974

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.84  E-value=3.5e-21  Score=181.05  Aligned_cols=84  Identities=30%  Similarity=0.503  Sum_probs=74.1

Q ss_pred             eEeeeEEEec--CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-c
Q psy17600          5 ACLKQLRMSD--PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-H   81 (351)
Q Consensus         5 ~~~~~~~f~~--~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~   81 (351)
                      ++..+..+.+  ....|+||||+.+++|.+++.   .+++..++.++.|++.||.|||++||+||||||+|||++.++ .
T Consensus        93 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~  169 (330)
T 3nsz_A           93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK  169 (330)
T ss_dssp             BCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE
T ss_pred             EEEeeeeeccCCCCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCE
Confidence            3444555666  667999999999999999884   489999999999999999999999999999999999999777 8


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      +||+|||+++
T Consensus       170 ~kl~Dfg~a~  179 (330)
T 3nsz_A          170 LRLIDWGLAE  179 (330)
T ss_dssp             EEECCCTTCE
T ss_pred             EEEEeCCCce
Confidence            9999999975

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.84  E-value=1.3e-21  Score=180.32  Aligned_cols=88  Identities=24%  Similarity=0.381  Sum_probs=79.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+..+..+.+...+|+||||+.||+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        71 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~  150 (288)
T 3kfa_A           71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV  150 (288)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCE
T ss_pred             EeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCE
Confidence            455666788899999999999999999999864  458999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||++..
T Consensus       151 ~l~Dfg~~~~  160 (288)
T 3kfa_A          151 KVADFGLSRL  160 (288)
T ss_dssp             EECCCCGGGT
T ss_pred             EEccCcccee
Confidence            9999999753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.84  E-value=3.8e-20  Score=171.05  Aligned_cols=162  Identities=23%  Similarity=0.363  Sum_probs=121.7

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEec-CCCcEEEEecCccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLD-ARGHIKLSDFGLCT   91 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~-~~~~~kl~DFGla~   91 (351)
                      ...+|+||||+++|+|.+++.+...+++..+..++.|++.||.|||+++  |+||||||+||+++ .++.+||+|||++.
T Consensus       101 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          101 KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             CceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            4568999999999999999988788999999999999999999999999  99999999999997 78999999999986


Q ss_pred             cCcCCCcccccccCCCCCC----------ccc------------CCCCCCC-CCHHHHHHHHHcCCCceeCCCCCCCCHH
Q psy17600         92 GLKKSHRTDFYRDLSQAKP----------SDF------------SYPPFCS-ENPQETYRKVMSWRDTLVFPPEVPISEE  148 (351)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~----------~~~------------~~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~  148 (351)
                      ...........++..+..|          .|.            +..||.+ .+....+..+........++.  ..+++
T Consensus       181 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  258 (290)
T 1t4h_A          181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK--VAIPE  258 (290)
T ss_dssp             GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGG--CCCHH
T ss_pred             cccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCC--CCCHH
Confidence            5443322222222222222          221            2688887 455566666665433333333  36789


Q ss_pred             HHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        149 ARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       149 ~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      +.++|.+ |..+|.+|..    ++++.   .||||++-
T Consensus       259 l~~li~~~l~~dp~~Rps----~~ell---~h~~f~~~  289 (290)
T 1t4h_A          259 VKEIIEGCIRQNKDERYS----IKDLL---NHAFFQEE  289 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCC----HHHHH---TSGGGC--
T ss_pred             HHHHHHHHccCChhhCCC----HHHHh---hCcccccC
Confidence            9999999 4579999986    56777   88999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.84  E-value=1.2e-21  Score=193.57  Aligned_cols=80  Identities=26%  Similarity=0.426  Sum_probs=73.0

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      .+...+|+|||||.+|+|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus       252 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a  331 (454)
T 1qcf_A          252 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA  331 (454)
T ss_dssp             ECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred             EeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence            3467899999999999999999743  36889999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      +.
T Consensus       332 ~~  333 (454)
T 1qcf_A          332 RV  333 (454)
T ss_dssp             GG
T ss_pred             eE
Confidence            54

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.84  E-value=2.6e-21  Score=180.94  Aligned_cols=86  Identities=23%  Similarity=0.418  Sum_probs=75.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+.+...+|+||||++||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++ ++.+|
T Consensus        91 iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~  169 (319)
T 2y4i_B           91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVV  169 (319)
T ss_dssp             BCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCE
T ss_pred             EeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEE
Confidence            4445566788889999999999999999997654 689999999999999999999999999999999999998 78999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       170 l~Dfg~~~  177 (319)
T 2y4i_B          170 ITDFGLFS  177 (319)
T ss_dssp             ECCCSCCC
T ss_pred             EeecCCcc
Confidence            99999975

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.84  E-value=2.6e-21  Score=179.35  Aligned_cols=81  Identities=19%  Similarity=0.365  Sum_probs=74.4

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      +++....|+||||+.||+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a  175 (298)
T 3f66_A           96 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA  175 (298)
T ss_dssp             CCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred             EcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccc
Confidence            56677899999999999999999753 46889999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      +.
T Consensus       176 ~~  177 (298)
T 3f66_A          176 RD  177 (298)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.84  E-value=2.9e-21  Score=186.33  Aligned_cols=79  Identities=35%  Similarity=0.583  Sum_probs=67.9

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCcEEEEec
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLM----KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHIKLSDF   87 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~~kl~DF   87 (351)
                      ++...+|+|||||+| +|.+.+.    ....+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+||
T Consensus       108 ~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Df  186 (383)
T 3eb0_A          108 SQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDF  186 (383)
T ss_dssp             --CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCC
T ss_pred             CCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEEC
Confidence            344569999999984 7666654    457899999999999999999999999999999999999997 6889999999


Q ss_pred             Ccccc
Q psy17600         88 GLCTG   92 (351)
Q Consensus        88 Gla~~   92 (351)
                      |+++.
T Consensus       187 g~a~~  191 (383)
T 3eb0_A          187 GSAKK  191 (383)
T ss_dssp             TTCEE
T ss_pred             CCCcc
Confidence            99753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.84  E-value=3.7e-20  Score=171.11  Aligned_cols=173  Identities=21%  Similarity=0.351  Sum_probs=127.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---   76 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---   76 (351)
                      .++..+..+++...+|+|||||+||+|.+.+..    ...+++..+..++.|++.||.|||++||+||||||+||++   
T Consensus        81 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~  160 (285)
T 3is5_A           81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT  160 (285)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS
T ss_pred             hHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC
Confidence            345566778899999999999999999998853    3679999999999999999999999999999999999999   


Q ss_pred             cCCCcEEEEecCccccCcCCCc------ccccccC-----CCCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         77 DARGHIKLSDFGLCTGLKKSHR------TDFYRDL-----SQAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        77 ~~~~~~kl~DFGla~~~~~~~~------~~~~~~~-----~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      +.++.+||+|||++........      +..|..+     .+....|.            +..||.+.+..+....+...
T Consensus       161 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~  240 (285)
T 3is5_A          161 SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK  240 (285)
T ss_dssp             STTCCEEECCCCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             CCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC
Confidence            4567899999999975433221      1112111     11112222            37899999888887777653


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        134 RDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ..... ....++++++.++|.++ ..+|.+|..    +.++.   .||||+.
T Consensus       241 ~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l---~hp~f~~  284 (285)
T 3is5_A          241 EPNYA-VECRPLTPQAVDLLKQMLTKDPERRPS----AAQVL---HHEWFKQ  284 (285)
T ss_dssp             CCCCC-C--CCCCHHHHHHHHHHTCSCTTTSCC----HHHHH---TSGGGGC
T ss_pred             Ccccc-cccCcCCHHHHHHHHHHccCChhhCcC----HHHHh---cCHHhhc
Confidence            32221 12234789999999994 579999986    56777   8899975

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=3.6e-21  Score=178.07  Aligned_cols=88  Identities=20%  Similarity=0.343  Sum_probs=77.4

Q ss_pred             eEeeeEEEecCCcE-EEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINL-YLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~l-ylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      .+..+..+.+.... |+||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        84 iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~  163 (298)
T 3pls_A           84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTV  163 (298)
T ss_dssp             BCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCE
T ss_pred             eeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcE
Confidence            34455566666665 999999999999999976 4568999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       164 kl~Dfg~~~~  173 (298)
T 3pls_A          164 KVADFGLARD  173 (298)
T ss_dssp             EECCTTSSCT
T ss_pred             EeCcCCCccc
Confidence            9999999753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.84  E-value=2.9e-20  Score=175.26  Aligned_cols=178  Identities=21%  Similarity=0.342  Sum_probs=130.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++..+..+++...+|+|||||. |+|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~k  140 (324)
T 3mtl_A           62 IVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELK  140 (324)
T ss_dssp             BCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEE
T ss_pred             CCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEE
Confidence            4555667889999999999997 5898888765 4589999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      |+|||++.......       .+..|..+       .+....|.            +.+||.+.+..+....+....+..
T Consensus       141 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  220 (324)
T 3mtl_A          141 LADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP  220 (324)
T ss_dssp             ECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             EccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            99999987543211       12222221       12222332            378999998888776665421110


Q ss_pred             -----------------eCCC---------CCCCCHHHHHHHHHHh-cCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        138 -----------------VFPP---------EVPISEEARETIVRFC-SECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       138 -----------------~~p~---------~~~~s~~~~dli~~l~-~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                                       .+|.         ...++++++++|.+++ .+|.+|.+    ++++.   .||||.++.+...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~f~~~~~~~~  293 (324)
T 3mtl_A          221 TEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAM---KHPFFLSLGERIH  293 (324)
T ss_dssp             CTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHT---TSGGGGGGCSTTS
T ss_pred             ChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCC----HHHHh---cChhhhhcccccc
Confidence                             0111         1136889999999954 79999986    56777   8999998766543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.84  E-value=2.2e-21  Score=198.79  Aligned_cols=88  Identities=25%  Similarity=0.400  Sum_probs=77.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++.++..+++ ..+|+|||||.||+|.+++... ..+++..+..++.|++.||.|||++|||||||||+|||++.++.+|
T Consensus       398 iv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vk  476 (613)
T 2ozo_A          398 IVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAK  476 (613)
T ss_dssp             BCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEE
T ss_pred             EeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEE
Confidence            4455555665 6799999999999999999654 4589999999999999999999999999999999999999999999


Q ss_pred             EEecCccccC
Q psy17600         84 LSDFGLCTGL   93 (351)
Q Consensus        84 l~DFGla~~~   93 (351)
                      |+|||+++.+
T Consensus       477 L~DFGla~~~  486 (613)
T 2ozo_A          477 ISDFGLSKAL  486 (613)
T ss_dssp             ECCCSTTTTC
T ss_pred             EeeccCcccc
Confidence            9999998643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.84  E-value=2.3e-21  Score=183.22  Aligned_cols=86  Identities=22%  Similarity=0.408  Sum_probs=73.8

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      +..+..+.+ ...++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        80 v~~~~~~~~-~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL  158 (327)
T 3lzb_A           80 CRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI  158 (327)
T ss_dssp             CCCCEEEES-SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEE
T ss_pred             eEEEEEEec-CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEE
Confidence            334444554 458999999999999999976 457999999999999999999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+++.
T Consensus       159 ~DfG~a~~  166 (327)
T 3lzb_A          159 TDFGLAKL  166 (327)
T ss_dssp             CCTTC---
T ss_pred             ccCcceeE
Confidence            99999753

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=2.3e-21  Score=176.61  Aligned_cols=88  Identities=20%  Similarity=0.246  Sum_probs=79.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||++||+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~k  144 (267)
T 3t9t_A           65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK  144 (267)
T ss_dssp             BCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEE
T ss_pred             EeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEE
Confidence            445566788888999999999999999999765 5689999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       145 l~dfg~~~~  153 (267)
T 3t9t_A          145 VSDFGMTRF  153 (267)
T ss_dssp             ECCTTGGGG
T ss_pred             Ecccccccc
Confidence            999999753

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.84  E-value=4.4e-21  Score=178.45  Aligned_cols=88  Identities=34%  Similarity=0.516  Sum_probs=79.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..+.+...+|+||||++|++|.+++.+ +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        81 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  159 (303)
T 3a7i_A           81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK  159 (303)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             CEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEE
Confidence            345556678888999999999999999998854 5799999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||++..
T Consensus       160 l~Dfg~~~~  168 (303)
T 3a7i_A          160 LADFGVAGQ  168 (303)
T ss_dssp             ECCCTTCEE
T ss_pred             Eeeccccee
Confidence            999999753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.84  E-value=6.3e-21  Score=181.95  Aligned_cols=178  Identities=21%  Similarity=0.296  Sum_probs=130.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+.+...+|+|||||+||+|.+++.+.+.+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+
T Consensus        92 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~  171 (360)
T 3eqc_A           92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI  171 (360)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCE
T ss_pred             CEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCE
Confidence            34556667888999999999999999999998888899999999999999999999996 99999999999999999999


Q ss_pred             EEEecCccccCcCCCcccccccCCC-----------CCCccc------------CCCCCCCCCHHHHHHH----------
Q psy17600         83 KLSDFGLCTGLKKSHRTDFYRDLSQ-----------AKPSDF------------SYPPFCSENPQETYRK----------  129 (351)
Q Consensus        83 kl~DFGla~~~~~~~~~~~~~~~~~-----------~~~~~~------------~~~Pf~~~~~~~~~~~----------  129 (351)
                      ||+|||++............++..+           ....|.            +..||...+.......          
T Consensus       172 kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  251 (360)
T 3eqc_A          172 KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA  251 (360)
T ss_dssp             EECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------
T ss_pred             EEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCC
Confidence            9999999864322211111112122           122222            2678877665543222          


Q ss_pred             --------------------------------HHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcC
Q psy17600        130 --------------------------------VMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSL  176 (351)
Q Consensus       130 --------------------------------i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~  176 (351)
                                                      +.... ....| ...++++++++|.+ |..+|.+|.+    ++++.  
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell--  323 (360)
T 3eqc_A          252 ETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP-PPKLP-SGVFSLEFQDFVNKCLIKNPAERAD----LKQLM--  323 (360)
T ss_dssp             ----------------------CCCHHHHHHHHHHSC-CCCCC-TTTSCHHHHHHHHHHHCSSTTTSCC----HHHHH--
T ss_pred             CCCCCcccCCCcccccccCCCCcccchhhhhHHhccC-CCCCC-cccccHHHHHHHHHHhhcChhhCCC----HHHHh--
Confidence                                            22111 11111 12368899999999 5579999986    56777  


Q ss_pred             CCCCCccCCCchhh
Q psy17600        177 GACQFFRGVDWDHI  190 (351)
Q Consensus       177 ~~h~ff~~idw~~l  190 (351)
                       .||||++.+|+.+
T Consensus       324 -~hp~~~~~~~~~~  336 (360)
T 3eqc_A          324 -VHAFIKRSDAEEV  336 (360)
T ss_dssp             -TSHHHHHHHHSCC
T ss_pred             -hChHhhcchHhhh
Confidence             8999998888765

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.84  E-value=2.8e-20  Score=173.44  Aligned_cols=182  Identities=21%  Similarity=0.233  Sum_probs=131.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+++...+|+|||||++++|..++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl  143 (311)
T 4agu_A           64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL  143 (311)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             ccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEE
Confidence            45566678899999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc--
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT--  136 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~--  136 (351)
                      +|||++.......       .+..|..+       .+....|.            +.+||.+.+..+....+......  
T Consensus       144 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  223 (311)
T 4agu_A          144 CDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI  223 (311)
T ss_dssp             CCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred             eeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccc
Confidence            9999987543211       11222221       12222332            37899988877666544321100  


Q ss_pred             ---------------eeCCC----------CCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        137 ---------------LVFPP----------EVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       137 ---------------~~~p~----------~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                                     ...|.          ...+++++.++|.++ ..+|.+|.+    ++++.   .||||+++.|...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell---~hp~f~~~~~~~~  296 (311)
T 4agu_A          224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT----CEQLL---HHPYFENIREIED  296 (311)
T ss_dssp             HHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHH---TSGGGTTCC----
T ss_pred             cccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC----HHHHh---cChHHHhccCHHH
Confidence                           01111          024788999999994 579999986    56777   8899999988765


Q ss_pred             hcC
Q psy17600        191 RER  193 (351)
Q Consensus       191 ~~~  193 (351)
                      ..+
T Consensus       297 ~~~  299 (311)
T 4agu_A          297 LAK  299 (311)
T ss_dssp             ---
T ss_pred             HHH
Confidence            444

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.84  E-value=6.9e-22  Score=191.78  Aligned_cols=88  Identities=27%  Similarity=0.433  Sum_probs=75.3

Q ss_pred             eEeeeEEEecCC--cEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe---
Q psy17600          5 ACLKQLRMSDPI--NLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL---   76 (351)
Q Consensus         5 ~~~~~~~f~~~~--~lylVmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill---   76 (351)
                      ++..+..+.+..  .+|+|||||+||+|.+++....   .+++..+..++.|++.||.|||++||+||||||+||++   
T Consensus        69 Iv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  148 (396)
T 4eut_A           69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG  148 (396)
T ss_dssp             BCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEEC
T ss_pred             CCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeec
Confidence            344444555544  7899999999999999997543   38999999999999999999999999999999999999   


Q ss_pred             -cCCCcEEEEecCcccc
Q psy17600         77 -DARGHIKLSDFGLCTG   92 (351)
Q Consensus        77 -~~~~~~kl~DFGla~~   92 (351)
                       +.++.+||+|||+++.
T Consensus       149 ~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A          149 EDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             TTSCEEEEECCGGGCEE
T ss_pred             CCCceeEEEecCCCceE
Confidence             7778899999999753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.84  E-value=3.3e-20  Score=174.84  Aligned_cols=173  Identities=26%  Similarity=0.407  Sum_probs=131.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..+.+...+|+||||++||+|.+++.+ ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl  182 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL  182 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEE
Confidence            44556678888999999999999999998854 56999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||++.......       .+..|..+      .+....|.            +.+||.+.+.......+..... ...
T Consensus       183 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~  261 (321)
T 2c30_A          183 SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-PKL  261 (321)
T ss_dssp             CCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCC
T ss_pred             eeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCc
Confidence            9999987654321       11122211      11222232            3689999998888877775321 122


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCC
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVD  186 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~id  186 (351)
                      +....++++++++|.++ ..+|.+|..    ++++.   .||||....
T Consensus       262 ~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell---~hp~~~~~~  302 (321)
T 2c30_A          262 KNSHKVSPVLRDFLERMLVRDPQERAT----AQELL---DHPFLLQTG  302 (321)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHH---TSGGGGGCC
T ss_pred             CccccCCHHHHHHHHHHccCChhhCcC----HHHHh---cChhhccCC
Confidence            22234789999999994 579999975    56777   889997543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.84  E-value=5.5e-21  Score=177.96  Aligned_cols=88  Identities=32%  Similarity=0.357  Sum_probs=79.0

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+..+..+.+...+|+||||++||+|.+++..   ...+++..+..++.|++.||.|||++||+||||||+||+++.++.
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~  171 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT  171 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred             eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCc
Confidence            44556677888899999999999999999873   346899999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccc
Q psy17600         82 IKLSDFGLCTG   92 (351)
Q Consensus        82 ~kl~DFGla~~   92 (351)
                      +||+|||++..
T Consensus       172 ~kl~Dfg~~~~  182 (307)
T 2nru_A          172 AKISDFGLARA  182 (307)
T ss_dssp             EEECCCTTCEE
T ss_pred             EEEeecccccc
Confidence            99999999753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.84  E-value=3.4e-21  Score=188.57  Aligned_cols=75  Identities=35%  Similarity=0.609  Sum_probs=65.0

Q ss_pred             cEEEEEecCCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-CcEEEEecCccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLM----KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHIKLSDFGLCT   91 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~~kl~DFGla~   91 (351)
                      .+|+||||+++ +|...+.    ....+++..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+++
T Consensus       127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            47899999986 5665553    35679999999999999999999999999999999999999965 568999999985


Q ss_pred             c
Q psy17600         92 G   92 (351)
Q Consensus        92 ~   92 (351)
                      .
T Consensus       206 ~  206 (420)
T 1j1b_A          206 Q  206 (420)
T ss_dssp             E
T ss_pred             h
Confidence            3

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=2e-21  Score=188.89  Aligned_cols=86  Identities=21%  Similarity=0.369  Sum_probs=71.6

Q ss_pred             EeeeEEE--ecCCcEEEEEecCCCCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          6 CLKQLRM--SDPINLYLIMEFLPGGDMMTLLMKK---------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         6 ~~~~~~f--~~~~~lylVmEy~~gg~L~~~l~~~---------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      +.++..|  ++...+|+||||+. |+|.+++...         ..+++..++.++.|++.||.|||++||+||||||+||
T Consensus        81 v~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NI  159 (405)
T 3rgf_A           81 ISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANI  159 (405)
T ss_dssp             CCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             eeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHe
Confidence            3444555  45778999999997 5888877522         2489999999999999999999999999999999999


Q ss_pred             Ee----cCCCcEEEEecCcccc
Q psy17600         75 LL----DARGHIKLSDFGLCTG   92 (351)
Q Consensus        75 ll----~~~~~~kl~DFGla~~   92 (351)
                      |+    +.++.+||+|||+++.
T Consensus       160 ll~~~~~~~~~~kl~Dfg~a~~  181 (405)
T 3rgf_A          160 LVMGEGPERGRVKIADMGFARL  181 (405)
T ss_dssp             EECCSSTTTTCEEECCTTCCC-
T ss_pred             EEecCCCCCCcEEEEECCCcee
Confidence            99    6778999999999853

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=2.2e-21  Score=187.18  Aligned_cols=81  Identities=19%  Similarity=0.361  Sum_probs=70.1

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      +++....|+||||++||+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus       160 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a  239 (373)
T 3c1x_A          160 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA  239 (373)
T ss_dssp             CCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             EcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccc
Confidence            45567889999999999999999764 45888999999999999999999999999999999999999999999999997


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      +.
T Consensus       240 ~~  241 (373)
T 3c1x_A          240 RD  241 (373)
T ss_dssp             --
T ss_pred             cc
Confidence            53

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.83  E-value=2.8e-21  Score=182.02  Aligned_cols=79  Identities=27%  Similarity=0.545  Sum_probs=73.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+|||||+||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence            56779999999999999999976 45699999999999999999999999999999999999999999999999999754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.83  E-value=2.7e-21  Score=181.72  Aligned_cols=83  Identities=30%  Similarity=0.637  Sum_probs=73.6

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc---EEEE
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH---IKLS   85 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~---~kl~   85 (351)
                      +..++ ...+|+||||++||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.   +||+
T Consensus        81 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           81 KNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             EEEEE-SSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             eeEEc-CCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence            33344 4459999999999999999988888999999999999999999999999999999999999987664   9999


Q ss_pred             ecCcccc
Q psy17600         86 DFGLCTG   92 (351)
Q Consensus        86 DFGla~~   92 (351)
                      |||++..
T Consensus       160 Dfg~~~~  166 (322)
T 2ycf_A          160 DFGHSKI  166 (322)
T ss_dssp             CCTTCEE
T ss_pred             cCcccee
Confidence            9999753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.83  E-value=1e-21  Score=185.91  Aligned_cols=77  Identities=21%  Similarity=0.343  Sum_probs=69.9

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEecCCC------------
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARG------------   80 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH-~~~iihrDlkp~Nill~~~~------------   80 (351)
                      +...+|||||||++|++.+.+.+ ..+++..++.++.|++.||.||| ++||+||||||+|||++.++            
T Consensus       133 ~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~  211 (336)
T 2vuw_A          133 KDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS  211 (336)
T ss_dssp             CTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred             ccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence            37899999999999987776644 57899999999999999999999 99999999999999999887            


Q ss_pred             --------cEEEEecCccc
Q psy17600         81 --------HIKLSDFGLCT   91 (351)
Q Consensus        81 --------~~kl~DFGla~   91 (351)
                              .+||+|||+|+
T Consensus       212 ~~~~~~~~~vkL~DFG~a~  230 (336)
T 2vuw_A          212 STIPSCGLQVSIIDYTLSR  230 (336)
T ss_dssp             EEEECTTEEEEECCCTTCB
T ss_pred             ccccCCCceEEEeeccccE
Confidence                    89999999975

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.83  E-value=6.9e-21  Score=173.38  Aligned_cols=86  Identities=13%  Similarity=0.196  Sum_probs=77.1

Q ss_pred             eEeeeEEEecC--CcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecC
Q psy17600          5 ACLKQLRMSDP--INLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDA   78 (351)
Q Consensus         5 ~~~~~~~f~~~--~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~   78 (351)
                      ++..+..+.+.  ..+|+||||++||+|.+++.+..  .+++..+..++.|++.||.|||+++  |+||||||+||+++.
T Consensus        69 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~  148 (271)
T 3kmu_A           69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE  148 (271)
T ss_dssp             EECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT
T ss_pred             hhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC
Confidence            44555566666  78999999999999999998765  4899999999999999999999999  999999999999999


Q ss_pred             CCcEEEEecCcc
Q psy17600         79 RGHIKLSDFGLC   90 (351)
Q Consensus        79 ~~~~kl~DFGla   90 (351)
                      ++.+++.|||++
T Consensus       149 ~~~~~l~~~~~~  160 (271)
T 3kmu_A          149 DMTARISMADVK  160 (271)
T ss_dssp             TSCEEEEGGGSC
T ss_pred             CcceeEEeccce
Confidence            999999999884

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.83  E-value=3e-20  Score=180.30  Aligned_cols=167  Identities=26%  Similarity=0.360  Sum_probs=120.9

Q ss_pred             cEEEEEecCCCCCHHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCcEEEEecCcccc
Q psy17600         17 NLYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHIKLSDFGLCTG   92 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l---~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~~kl~DFGla~~   92 (351)
                      .+|+|||||+++.+....   .....+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||+|+.
T Consensus       112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            489999999875443322   2356799999999999999999999999999999999999998 789999999999976


Q ss_pred             CcCCC------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC------------
Q psy17600         93 LKKSH------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRD------------  135 (351)
Q Consensus        93 ~~~~~------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~------------  135 (351)
                      .....      .+..|..+       .+....|+            +.+||.+.+..+....|....+            
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~  271 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP  271 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred             ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence            53222      12223221       12223333            3799999988777666553111            


Q ss_pred             ---ceeCCCC----------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        136 ---TLVFPPE----------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       136 ---~~~~p~~----------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                         ...+|..          ...+++++++|.++ ..+|.+|++    +.++.   .||||+++.|...
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~f~~~~~~~~  333 (394)
T 4e7w_A          272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT----AIEAL---CHPFFDELRTGEA  333 (394)
T ss_dssp             GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHH---TSGGGSTTTSSCC
T ss_pred             hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC----HHHHh---cChhhhhhccccc
Confidence               0111111          12789999999995 579999996    56777   8999999988654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.83  E-value=2.9e-21  Score=178.84  Aligned_cols=79  Identities=23%  Similarity=0.420  Sum_probs=75.1

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+||||++||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence            6678999999999999999999888899999999999999999999999999999999999999999999999999753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.83  E-value=4.3e-21  Score=176.60  Aligned_cols=79  Identities=27%  Similarity=0.461  Sum_probs=72.2

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .....|+||||++||+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        83 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           83 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             CSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             cCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            345679999999999999999764 4589999999999999999999999999999999999999999999999999753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=7.4e-21  Score=179.95  Aligned_cols=178  Identities=23%  Similarity=0.287  Sum_probs=133.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----------------------------------------CCCCCHH
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----------------------------------------KDTLSEE   43 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----------------------------------------~~~l~e~   43 (351)
                      .++..+..|++...+|+|||||+||+|.+++..                                        ...+++.
T Consensus        89 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (345)
T 3hko_A           89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREK  168 (345)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHH
T ss_pred             CcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHH
Confidence            445667778999999999999999999998841                                        1123577


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC--cEEEEecCccccCcCCC-----------cccccccC-----
Q psy17600         44 CTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG--HIKLSDFGLCTGLKKSH-----------RTDFYRDL-----  105 (351)
Q Consensus        44 ~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~--~~kl~DFGla~~~~~~~-----------~~~~~~~~-----  105 (351)
                      .+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.+....           .+..|..+     
T Consensus       169 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  248 (345)
T 3hko_A          169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT  248 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence            7888999999999999999999999999999998776  89999999997542211           12222221     


Q ss_pred             ---CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCC
Q psy17600        106 ---SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARG  169 (351)
Q Consensus       106 ---~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~  169 (351)
                         .+....|.            +..||.+.+..+....+.........|....++++++++|.++ ..+|.+|..    
T Consensus       249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----  324 (345)
T 3hko_A          249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD----  324 (345)
T ss_dssp             SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC----
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCC----
Confidence               11122232            3689999999988888887544333343334789999999994 579999986    


Q ss_pred             hHHHhcCCCCCCccCCCch
Q psy17600        170 VEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       170 ~~~i~~~~~h~ff~~idw~  188 (351)
                      +.++.   .||||+++.|.
T Consensus       325 ~~~~l---~hp~~~~~~~~  340 (345)
T 3hko_A          325 AMRAL---QHPWISQFSDK  340 (345)
T ss_dssp             HHHHH---HSHHHHTTSSC
T ss_pred             HHHHh---cChhhccChHh
Confidence            56777   78999987664

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.83  E-value=1.2e-20  Score=174.02  Aligned_cols=84  Identities=27%  Similarity=0.498  Sum_probs=72.5

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecCCCc-
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGH-   81 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~~~~-   81 (351)
                      +..+..+++..  |+||||++||+|.+.+.+. ..+++..+..++.|++.||.|||++|  |+||||||+||+++.++. 
T Consensus        86 ~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~  163 (287)
T 4f0f_A           86 VKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDEN  163 (287)
T ss_dssp             CCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTT
T ss_pred             hhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCC
Confidence            34444555554  7999999999999888654 46899999999999999999999999  999999999999988776 


Q ss_pred             ----EEEEecCccc
Q psy17600         82 ----IKLSDFGLCT   91 (351)
Q Consensus        82 ----~kl~DFGla~   91 (351)
                          +||+|||+++
T Consensus       164 ~~~~~kl~Dfg~~~  177 (287)
T 4f0f_A          164 APVCAKVADFGLSQ  177 (287)
T ss_dssp             CSCCEEECCCTTCB
T ss_pred             CceeEEeCCCCccc
Confidence                9999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.83  E-value=7.7e-21  Score=174.74  Aligned_cols=179  Identities=21%  Similarity=0.352  Sum_probs=135.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC----
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG----   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~----   80 (351)
                      .+..+..+.+...+|+||||+++++|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++    
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~  149 (283)
T 3bhy_A           70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP  149 (283)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSC
T ss_pred             eeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCC
Confidence            3445566888899999999999999999998878899999999999999999999999999999999999998877    


Q ss_pred             cEEEEecCccccCcCCC------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSH------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||++.......      .+..|..+      .+....|.            +..||.+.+..+....+......
T Consensus       150 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  229 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD  229 (283)
T ss_dssp             CEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC
T ss_pred             ceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC
Confidence            89999999987653321      11112111      11122222            36899999998888888764322


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      ...+.....+++++++|.+ +..+|.+|..    +.++.   .||||+.+.|..+
T Consensus       230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l---~h~~~~~~~~~~~  277 (283)
T 3bhy_A          230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMT----IAQSL---EHSWIKAIRRRNV  277 (283)
T ss_dssp             CCHHHHTTCCHHHHHHHHTTSCSSGGGSCC----HHHHH---HCHHHHHHHHCCC
T ss_pred             CcchhcccCCHHHHHHHHHHccCCHhHCcC----HHHHH---hCHHHHHHHHHhh
Confidence            2111112478899999999 5579999986    56777   7899998877654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.83  E-value=4.3e-21  Score=184.66  Aligned_cols=74  Identities=31%  Similarity=0.618  Sum_probs=61.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ..+|+||||+ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             CeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            6689999999 7899988865 679999999999999999999999999999999999999999999999999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.83  E-value=1.2e-20  Score=175.99  Aligned_cols=87  Identities=26%  Similarity=0.472  Sum_probs=75.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      .+..+..+.+...+|+||||+.+|+|.+++..    ...+++..+..++.|++.||.|||++|++||||||+||+++.++
T Consensus        94 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~  173 (310)
T 2wqm_A           94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG  173 (310)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             EeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC
Confidence            44556678888999999999999999998864    45689999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccc
Q psy17600         81 HIKLSDFGLCT   91 (351)
Q Consensus        81 ~~kl~DFGla~   91 (351)
                      .+||+|||++.
T Consensus       174 ~~kl~Dfg~~~  184 (310)
T 2wqm_A          174 VVKLGDLGLGR  184 (310)
T ss_dssp             CEEECCC----
T ss_pred             CEEEEecccee
Confidence            99999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.83  E-value=4.1e-20  Score=169.61  Aligned_cols=170  Identities=27%  Similarity=0.405  Sum_probs=121.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+++...+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        73 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~k  152 (278)
T 3cok_A           73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIK  152 (278)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEE
T ss_pred             eEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEE
Confidence            445566788899999999999999999999865 5789999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------ccccccCC------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRDLS------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~~~------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++........       +..|..+.      +....|.            +.+||...+.......+..  ....
T Consensus       153 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~  230 (278)
T 3cok_A          153 IADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL--ADYE  230 (278)
T ss_dssp             ECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS--SCCC
T ss_pred             EEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh--cccC
Confidence            999999876532211       11121111      1112222            2678887766555554443  2233


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      .|.  .++.+++++|.++ ..+|.+|..    ++++.   .||||.+.
T Consensus       231 ~~~--~~~~~~~~li~~~l~~dp~~Rps----~~~~l---~h~~~~~~  269 (278)
T 3cok_A          231 MPS--FLSIEAKDLIHQLLRRNPADRLS----LSSVL---DHPFMSRN  269 (278)
T ss_dssp             CCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHT---TSTTTC--
T ss_pred             Ccc--ccCHHHHHHHHHHcccCHhhCCC----HHHHh---cCccccCC
Confidence            443  3789999999995 479999986    56666   88999854

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.83  E-value=4e-21  Score=176.47  Aligned_cols=83  Identities=24%  Similarity=0.410  Sum_probs=74.0

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      +.+.....+|+||||++||+|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+||
T Consensus        74 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Df  153 (279)
T 1qpc_A           74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF  153 (279)
T ss_dssp             EEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCC
Confidence            33445667999999999999999986432  6899999999999999999999999999999999999999999999999


Q ss_pred             Ccccc
Q psy17600         88 GLCTG   92 (351)
Q Consensus        88 Gla~~   92 (351)
                      |++..
T Consensus       154 g~~~~  158 (279)
T 1qpc_A          154 GLARL  158 (279)
T ss_dssp             TTCEE
T ss_pred             ccccc
Confidence            99753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.82  E-value=8.5e-20  Score=169.00  Aligned_cols=170  Identities=22%  Similarity=0.342  Sum_probs=132.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++..+..+++...+|+||||+.|++|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  156 (294)
T 2rku_A           77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI  156 (294)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             EeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEE
Confidence            44556678889999999999999999999988788999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc--ccccccCCCC-----------CCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSHR--TDFYRDLSQA-----------KPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~~--~~~~~~~~~~-----------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||++........  .....+..+.           ...|.            +..||.+.+..+.+..+...  ...+
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~  234 (294)
T 2rku_A          157 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSI  234 (294)
T ss_dssp             CCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCC
T ss_pred             EeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc--cCCC
Confidence            99999876532111  1111111111           12222            36899999888888888763  3444


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      |.  .+++++.++|.+ +..+|.+|..    ++++.   .||||...
T Consensus       235 ~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll---~~~~~~~~  272 (294)
T 2rku_A          235 PK--HINPVAASLIQKMLQTDPTARPT----INELL---NDEFFTSG  272 (294)
T ss_dssp             CT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGG---GSHHHHTS
T ss_pred             cc--ccCHHHHHHHHHHcccChhhCcC----HHHHh---hChheecC
Confidence            54  478999999999 4579999986    44665   88999753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.82  E-value=7.6e-20  Score=167.44  Aligned_cols=169  Identities=21%  Similarity=0.409  Sum_probs=130.8

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||++|++|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        73 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l  152 (276)
T 2h6d_A           73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKI  152 (276)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEE
T ss_pred             EeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEE
Confidence            34456678889999999999999999999988888999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCCc------ccccccCCC-------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         85 SDFGLCTGLKKSHR------TDFYRDLSQ-------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        85 ~DFGla~~~~~~~~------~~~~~~~~~-------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      +|||++........      +..|..+..       ....|.            +..||...+....++.+...  ...+
T Consensus       153 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~  230 (276)
T 2h6d_A          153 ADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYI  230 (276)
T ss_dssp             CCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCC
T ss_pred             eecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--cccC
Confidence            99999876543211      111222111       111221            36899998888888888763  2334


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      |.  .++.+..++|.++ ..+|.+|..    ++++.   .||||+.
T Consensus       231 ~~--~~~~~l~~li~~~l~~~p~~Rps----~~~~l---~h~~~~~  267 (276)
T 2h6d_A          231 PE--YLNRSVATLLMHMLQVDPLKRAT----IKDIR---EHEWFKQ  267 (276)
T ss_dssp             CT--TSCHHHHHHHHHHTCSSGGGSCC----HHHHH---HSHHHHT
T ss_pred             ch--hcCHHHHHHHHHHccCChhhCCC----HHHHH---hChhhcc
Confidence            43  3689999999995 479999986    56777   7899974

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.82  E-value=5.9e-21  Score=177.71  Aligned_cols=172  Identities=22%  Similarity=0.337  Sum_probs=117.7

Q ss_pred             EeeeEEEec----CCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-
Q psy17600          6 CLKQLRMSD----PINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-   78 (351)
Q Consensus         6 ~~~~~~f~~----~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-   78 (351)
                      +..+..|++    ...+|+|||||+||+|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++. 
T Consensus        74 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  153 (299)
T 3m2w_A           74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK  153 (299)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS
T ss_pred             hhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC
Confidence            334444554    677999999999999999998754  6999999999999999999999999999999999999998 


Q ss_pred             --CCcEEEEecCccccCcCCC---cccccccCCCCCCcccCCCCCCCCCHHHHHHHHHcCC--CceeCCCC--CCCCHHH
Q psy17600         79 --RGHIKLSDFGLCTGLKKSH---RTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSWR--DTLVFPPE--VPISEEA  149 (351)
Q Consensus        79 --~~~~kl~DFGla~~~~~~~---~~~~~~~~~~~~~~~~~~~Pf~~~~~~~~~~~i~~~~--~~~~~p~~--~~~s~~~  149 (351)
                        ++.+||+|||++.......   ..+.|..+........+.+||.+.+.......+....  ....+|..  ..+++++
T Consensus       154 ~~~~~~kl~Dfg~a~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (299)
T 3m2w_A          154 RPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV  233 (299)
T ss_dssp             STTCCEEECCCTTCEECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHH
T ss_pred             CCCCcEEEeccccccccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHH
Confidence              7899999999997654321   1122211111111112467887665544332221111  11122211  2478999


Q ss_pred             HHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        150 RETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       150 ~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +++|.++ ..+|.+|..    ++++.   .||||++
T Consensus       234 ~~li~~~l~~dP~~Rps----~~e~l---~hp~~~~  262 (299)
T 3m2w_A          234 KMLIRNLLKTEPTQRMT----ITEFM---NHPWIMQ  262 (299)
T ss_dssp             HHHHHHHTCSSTTTSCC----HHHHH---TSHHHHT
T ss_pred             HHHHHHHcccChhhCCC----HHHHh---cChhhcc
Confidence            9999994 579999986    56777   8899975

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.82  E-value=5.6e-21  Score=179.51  Aligned_cols=87  Identities=25%  Similarity=0.455  Sum_probs=76.6

Q ss_pred             EeeeEEEec--CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSD--PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~--~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+..+.+  ...+|+|||||++|+|.+++.+. .+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        96 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~k  174 (318)
T 3lxp_A           96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVK  174 (318)
T ss_dssp             CCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             hhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEE
Confidence            344445555  46899999999999999999664 599999999999999999999999999999999999999999999


Q ss_pred             EEecCccccC
Q psy17600         84 LSDFGLCTGL   93 (351)
Q Consensus        84 l~DFGla~~~   93 (351)
                      |+|||++...
T Consensus       175 l~Dfg~a~~~  184 (318)
T 3lxp_A          175 IGDFGLAKAV  184 (318)
T ss_dssp             ECCGGGCEEC
T ss_pred             ECCccccccc
Confidence            9999997643

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.82  E-value=4.7e-21  Score=188.33  Aligned_cols=89  Identities=28%  Similarity=0.418  Sum_probs=71.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCC-------HHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLS-------EECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL   76 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~-------e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill   76 (351)
                      +++..+..+++...+|+|||||. |+|.+++.......       +..+..++.|++.||.|||++||+||||||+|||+
T Consensus        70 nIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl  148 (434)
T 2rio_A           70 NVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV  148 (434)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEE
Confidence            45566778899999999999996 69999997654332       22346789999999999999999999999999999


Q ss_pred             cCC-------------CcEEEEecCccccC
Q psy17600         77 DAR-------------GHIKLSDFGLCTGL   93 (351)
Q Consensus        77 ~~~-------------~~~kl~DFGla~~~   93 (351)
                      +.+             +.+||+|||+|+..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~  178 (434)
T 2rio_A          149 STSSRFTADQQTGAENLRILISDFGLCKKL  178 (434)
T ss_dssp             ECCHHHHSCCTTCCCSCEEEECCCTTCEEC
T ss_pred             ecCcccccccccCCCceEEEEcccccceec
Confidence            754             48999999998643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.82  E-value=1e-20  Score=185.07  Aligned_cols=169  Identities=27%  Similarity=0.495  Sum_probs=123.2

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---cEEEEecCc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---HIKLSDFGL   89 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---~~kl~DFGl   89 (351)
                      -+...+|+|||||+||+|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++   .+||+|||+
T Consensus       209 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          209 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             EESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             EecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence            34567899999999999999998888899999999999999999999999999999999999997544   599999999


Q ss_pred             cccCcCCCc------ccccccCCCC---------CCccc------------CCCCCCCCCHH-HHHHHHHcCCCceeCCC
Q psy17600         90 CTGLKKSHR------TDFYRDLSQA---------KPSDF------------SYPPFCSENPQ-ETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        90 a~~~~~~~~------~~~~~~~~~~---------~~~~~------------~~~Pf~~~~~~-~~~~~i~~~~~~~~~p~  141 (351)
                      ++.......      +..|..+...         ...|.            +.+||.+.... .....+....  ..+++
T Consensus       289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~--~~~~~  366 (419)
T 3i6u_A          289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK--YNFIP  366 (419)
T ss_dssp             TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC--CCCCH
T ss_pred             ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC--CCCCc
Confidence            986543321      2222222211         11121            26888765433 3444454422  22221


Q ss_pred             C--CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        142 E--VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       142 ~--~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      .  ..+++++.++|.++ ..+|.+|..    ++++.   .||||++.+|...
T Consensus       367 ~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l---~hp~~~~~~~~~~  411 (419)
T 3i6u_A          367 EVWAEVSEKALDLVKKLLVVDPKARFT----TEEAL---RHPWLQDEDMKRK  411 (419)
T ss_dssp             HHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHH---HSGGGCCHHHHHH
T ss_pred             hhhcccCHHHHHHHHHHccCChhHCcC----HHHHh---CCcccCChhHHHH
Confidence            1  24789999999995 479999987    56777   8899999988764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.82  E-value=7.2e-21  Score=177.79  Aligned_cols=76  Identities=24%  Similarity=0.461  Sum_probs=69.0

Q ss_pred             cEEEEEecCCCCCHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMK------KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~------~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      ..|+||||+++|+|.+++..      ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus       115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~  194 (313)
T 3brb_A          115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS  194 (313)
T ss_dssp             CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred             ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcc
Confidence            46999999999999999853      356899999999999999999999999999999999999999999999999997


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      +.
T Consensus       195 ~~  196 (313)
T 3brb_A          195 KK  196 (313)
T ss_dssp             --
T ss_pred             ee
Confidence            53

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.82  E-value=1e-20  Score=186.07  Aligned_cols=89  Identities=26%  Similarity=0.428  Sum_probs=74.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---R   79 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---~   79 (351)
                      +++..+..+++...+|+|||||. |+|.+++.... .+.+..+..++.|++.||.|||++||+||||||+|||++.   +
T Consensus        79 nIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~  157 (432)
T 3p23_A           79 NVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAH  157 (432)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTT
T ss_pred             CcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCC
Confidence            45666778999999999999996 69999997653 4556667889999999999999999999999999999953   2


Q ss_pred             C--cEEEEecCccccC
Q psy17600         80 G--HIKLSDFGLCTGL   93 (351)
Q Consensus        80 ~--~~kl~DFGla~~~   93 (351)
                      +  .+||+|||+|+..
T Consensus       158 ~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          158 GKIKAMISDFGLCKKL  173 (432)
T ss_dssp             TBCCEEECCTTEEECC
T ss_pred             CceeEEEecccceeec
Confidence            3  5789999998643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.82  E-value=4.8e-21  Score=189.23  Aligned_cols=85  Identities=21%  Similarity=0.370  Sum_probs=74.4

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ..+..+. ...+|+|||||++|+|.+++..  ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||
T Consensus       243 ~~~~~~~-~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl  321 (452)
T 1fmk_A          243 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  321 (452)
T ss_dssp             CEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             eEEEEEc-CCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEE
Confidence            3333444 4789999999999999999964  246899999999999999999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy17600         85 SDFGLCTG   92 (351)
Q Consensus        85 ~DFGla~~   92 (351)
                      +|||+++.
T Consensus       322 ~DfG~a~~  329 (452)
T 1fmk_A          322 ADFGLARL  329 (452)
T ss_dssp             CCCCTTC-
T ss_pred             CCCcccee
Confidence            99999753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.82  E-value=4.6e-20  Score=174.43  Aligned_cols=183  Identities=19%  Similarity=0.268  Sum_probs=126.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe------
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL------   76 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill------   76 (351)
                      .+..+..|++...+|+||||+ +|+|.+.+....  .+++..+..++.|++.||.|||++||+||||||+|||+      
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  162 (355)
T 2eu9_A           84 CVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE  162 (355)
T ss_dssp             BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred             EEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence            344556688889999999999 677777776543  68999999999999999999999999999999999999      


Q ss_pred             -------------cCCCcEEEEecCccccCcCCC----cccccccC------CCCCCccc------------CCCCCCCC
Q psy17600         77 -------------DARGHIKLSDFGLCTGLKKSH----RTDFYRDL------SQAKPSDF------------SYPPFCSE  121 (351)
Q Consensus        77 -------------~~~~~~kl~DFGla~~~~~~~----~~~~~~~~------~~~~~~~~------------~~~Pf~~~  121 (351)
                                   +.++.+||+|||+++......    .+..|..+      .+....|.            +.+||.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (355)
T 2eu9_A          163 TLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH  242 (355)
T ss_dssp             EEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence                         567899999999997543221    11222211      12222332            36899888


Q ss_pred             CHHHHHHHHHcCCCce-------------------eCC---------------------CCCCCCHHHHHHHHHH-hcCc
Q psy17600        122 NPQETYRKVMSWRDTL-------------------VFP---------------------PEVPISEEARETIVRF-CSEC  160 (351)
Q Consensus       122 ~~~~~~~~i~~~~~~~-------------------~~p---------------------~~~~~s~~~~dli~~l-~~~~  160 (351)
                      +..+....+......+                   .++                     .....++++.++|.++ ..+|
T Consensus       243 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  322 (355)
T 2eu9_A          243 ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP  322 (355)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred             CHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence            7766544433211100                   000                     0011245788999994 5799


Q ss_pred             cccCCCCCChHHHhcCCCCCCccCCCchhhhcCCC
Q psy17600        161 DRRLGSARGVEELKSLGACQFFRGVDWDHIRERPA  195 (351)
Q Consensus       161 ~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~  195 (351)
                      .+|.+    ++++.   .||||++++|+.....+.
T Consensus       323 ~~Rpt----~~e~l---~hp~f~~~~~~~~~~~~~  350 (355)
T 2eu9_A          323 AQRIT----LAEAL---LHPFFAGLTPEERSFHTS  350 (355)
T ss_dssp             TTSCC----HHHHT---TSGGGGGCCHHHHC----
T ss_pred             hhCcC----HHHHh---cChhhcCCChhhcccccc
Confidence            99987    45666   899999999998754433

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.82  E-value=5.4e-21  Score=180.08  Aligned_cols=88  Identities=24%  Similarity=0.343  Sum_probs=77.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL   76 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill   76 (351)
                      +++..+..+.+...+|+|||||+||+|.+++....       .+++..+..++.|++.||.|||++||+||||||+||++
T Consensus        94 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli  173 (327)
T 2yfx_A           94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL  173 (327)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEE
Confidence            34555667888889999999999999999998653       48899999999999999999999999999999999999


Q ss_pred             cCC---CcEEEEecCccc
Q psy17600         77 DAR---GHIKLSDFGLCT   91 (351)
Q Consensus        77 ~~~---~~~kl~DFGla~   91 (351)
                      +.+   ..+||+|||++.
T Consensus       174 ~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          174 TCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             SCSSTTCCEEECCCHHHH
T ss_pred             ecCCCcceEEECcccccc
Confidence            844   469999999974

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.82  E-value=4.2e-20  Score=170.66  Aligned_cols=177  Identities=23%  Similarity=0.422  Sum_probs=136.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC---Cc
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR---GH   81 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~---~~   81 (351)
                      .+..+..+.+...+|+||||+++++|.+.+.+...+++..+..++.|++.||.|||++||+||||||+||+++.+   +.
T Consensus        83 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~  162 (287)
T 2wei_A           83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCD  162 (287)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             ccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCccc
Confidence            445556688889999999999999999999887889999999999999999999999999999999999999754   47


Q ss_pred             EEEEecCccccCcCCCcc-c-----ccccC-----CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         82 IKLSDFGLCTGLKKSHRT-D-----FYRDL-----SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~-~-----~~~~~-----~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      +||+|||++......... .     .|..+     .+....|.            +.+||.+.+..+....+........
T Consensus       163 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  242 (287)
T 2wei_A          163 IKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD  242 (287)
T ss_dssp             EEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred             EEEeccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999999998755432211 1     11111     11122222            3689999999888888887544444


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      .|....++++++++|.++ ..+|.+|..    ++++.   .||||++.+|+
T Consensus       243 ~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell---~hp~~~~~~~~  286 (287)
T 2wei_A          243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCL---EHPWIQKYSSE  286 (287)
T ss_dssp             SGGGTTSCHHHHHHHHHHTCSSGGGSCC----HHHHH---HSHHHHHHCCC
T ss_pred             chhhhhcCHHHHHHHHHHcccChhhCcC----HHHHh---cCHHHhccccC
Confidence            444345899999999995 479999986    56777   78999987765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.82  E-value=1.5e-20  Score=178.93  Aligned_cols=74  Identities=27%  Similarity=0.524  Sum_probs=64.6

Q ss_pred             EEEEEecCCCCCHHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeeccCCCCcEEecC-CCcEEEEecCcc
Q psy17600         18 LYLIMEFLPGGDMMTLL----MKKDTLSEECTQFYIAETALAIDSIH--KLGFIHRDIKPDNLLLDA-RGHIKLSDFGLC   90 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l----~~~~~l~e~~~~~~~~qi~~al~~lH--~~~iihrDlkp~Nill~~-~~~~kl~DFGla   90 (351)
                      +|+|||||.++ |...+    .....+++..+..++.|++.||.|||  ++||+||||||+|||++. ++.+||+|||++
T Consensus       101 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a  179 (360)
T 3e3p_A          101 LNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA  179 (360)
T ss_dssp             EEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence            89999999864 44333    34567899999999999999999999  999999999999999996 899999999997


Q ss_pred             cc
Q psy17600         91 TG   92 (351)
Q Consensus        91 ~~   92 (351)
                      +.
T Consensus       180 ~~  181 (360)
T 3e3p_A          180 KK  181 (360)
T ss_dssp             BC
T ss_pred             ee
Confidence            53

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=7.4e-21  Score=175.69  Aligned_cols=84  Identities=26%  Similarity=0.430  Sum_probs=74.9

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      .+..+ ....+|+||||++||+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|
T Consensus        75 ~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~D  153 (287)
T 1u59_A           75 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISD  153 (287)
T ss_dssp             EEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECC
T ss_pred             EEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECc
Confidence            33444 556799999999999999998643 4689999999999999999999999999999999999999999999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||++..
T Consensus       154 fg~~~~  159 (287)
T 1u59_A          154 FGLSKA  159 (287)
T ss_dssp             CTTCEE
T ss_pred             ccceee
Confidence            999754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.82  E-value=1e-20  Score=176.95  Aligned_cols=76  Identities=30%  Similarity=0.551  Sum_probs=67.5

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCCCCcEEecCCCc-EEEEecC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHK---LGFIHRDIKPDNLLLDARGH-IKLSDFG   88 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~---~~iihrDlkp~Nill~~~~~-~kl~DFG   88 (351)
                      +.+|+||||++||+|.+++....   .+++..+..++.|++.||.|||+   +||+||||||+||+++.++. +||+|||
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg  151 (307)
T 2eva_A           72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG  151 (307)
T ss_dssp             TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCC
T ss_pred             CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccc
Confidence            34799999999999999998654   36888899999999999999999   89999999999999998886 7999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      ++.
T Consensus       152 ~~~  154 (307)
T 2eva_A          152 TAC  154 (307)
T ss_dssp             C--
T ss_pred             ccc
Confidence            964

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.82  E-value=2.9e-20  Score=176.30  Aligned_cols=163  Identities=23%  Similarity=0.395  Sum_probs=106.0

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---CCcEEEEecCc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---RGHIKLSDFGL   89 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---~~~~kl~DFGl   89 (351)
                      ...+|+|||||+||+|.+++.+..  .+++..+..++.|++.||.|||++||+||||||+||+++.   ++.+||+|||+
T Consensus        98 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A           98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence            445899999999999999998654  6999999999999999999999999999999999999976   45699999999


Q ss_pred             cccCcCCCcccccccCCCCCCc-----------cc------------CCCCCCCCCHHHHH----HHHHcCCCceeCCCC
Q psy17600         90 CTGLKKSHRTDFYRDLSQAKPS-----------DF------------SYPPFCSENPQETY----RKVMSWRDTLVFPPE  142 (351)
Q Consensus        90 a~~~~~~~~~~~~~~~~~~~~~-----------~~------------~~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~  142 (351)
                      ++............+..+..|+           |.            +..||.+.+.....    ..+.........|..
T Consensus       178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (336)
T 3fhr_A          178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW  257 (336)
T ss_dssp             CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTS
T ss_pred             ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhh
Confidence            9755432222111222222222           21            36888776655432    223222222223333


Q ss_pred             CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        143 VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       143 ~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ..++++++++|.++ ..+|.+|.+    ++++.   .||||+.
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt----~~ell---~hp~~~~  293 (336)
T 3fhr_A          258 SEVSEDAKQLIRLLLKTDPTERLT----ITQFM---NHPWINQ  293 (336)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCC----HHHHH---HSHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcC----HHHHh---cCccccc
Confidence            45799999999995 479999986    56777   7899975

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.82  E-value=1.1e-20  Score=195.13  Aligned_cols=85  Identities=25%  Similarity=0.399  Sum_probs=75.5

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLS   85 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~   85 (351)
                      ..+..+ ....+|+|||||+||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+
T Consensus       455 ~l~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~  533 (656)
T 2j0j_A          455 KLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG  533 (656)
T ss_dssp             CEEEEE-CSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             eEEEEE-ecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEE
Confidence            333334 5567999999999999999998654 68999999999999999999999999999999999999999999999


Q ss_pred             ecCcccc
Q psy17600         86 DFGLCTG   92 (351)
Q Consensus        86 DFGla~~   92 (351)
                      |||+++.
T Consensus       534 DFG~a~~  540 (656)
T 2j0j_A          534 DFGLSRY  540 (656)
T ss_dssp             CCCCCCS
T ss_pred             ecCCCee
Confidence            9999754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.82  E-value=1.2e-20  Score=174.23  Aligned_cols=88  Identities=31%  Similarity=0.466  Sum_probs=78.1

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-CC
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-~~   80 (351)
                      ++..+..+.+...+|+||||++||+|.+++...   ..+++..+..++.|++.||.|||++||+||||||+||+++. ++
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~  160 (295)
T 2clq_A           81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG  160 (295)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTC
T ss_pred             EeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCC
Confidence            445566788889999999999999999999865   24678888999999999999999999999999999999987 89


Q ss_pred             cEEEEecCcccc
Q psy17600         81 HIKLSDFGLCTG   92 (351)
Q Consensus        81 ~~kl~DFGla~~   92 (351)
                      .+||+|||++..
T Consensus       161 ~~kl~Dfg~~~~  172 (295)
T 2clq_A          161 VLKISDFGTSKR  172 (295)
T ss_dssp             CEEECCTTTCEE
T ss_pred             CEEEeecccccc
Confidence            999999999753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1e-19  Score=173.00  Aligned_cols=179  Identities=20%  Similarity=0.310  Sum_probs=131.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..|.+...+|+||||+.+ +|..++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        73 ~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  151 (346)
T 1ua2_A           73 NIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVL  151 (346)
T ss_dssp             TBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             CCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCE
Confidence            345566678889999999999986 888888654 368899999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC-------cccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         83 KLSDFGLCTGLKKSH-------RTDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        83 kl~DFGla~~~~~~~-------~~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      ||+|||+++......       .+..|..+.       +....|.            +.+||.+.+..+.+..+......
T Consensus       152 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~  231 (346)
T 1ua2_A          152 KLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGT  231 (346)
T ss_dssp             EECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             EEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCC
Confidence            999999997653221       111222111       1122232            26899999888887777642111


Q ss_pred             e---eCC------C---------------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        137 L---VFP------P---------------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       137 ~---~~p------~---------------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      .   .+|      .               ....+++++++|.+ |..+|.+|.+    ++++.   .||||++..|...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell---~h~~f~~~~~~~~  303 (346)
T 1ua2_A          232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQAL---KMKYFSNRPGPTP  303 (346)
T ss_dssp             CCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHH---TSGGGTSSSCCCC
T ss_pred             CChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC----HHHHh---cChhhhcCCCCCC
Confidence            0   011      0               02357899999999 5579999987    56777   8899998766443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.82  E-value=6.9e-21  Score=174.93  Aligned_cols=79  Identities=25%  Similarity=0.541  Sum_probs=69.7

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDT--LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      .+...+|+||||+++|+|.+++.+...  +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~  164 (278)
T 1byg_A           85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT  164 (278)
T ss_dssp             CC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred             cCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccc
Confidence            344579999999999999999976543  889999999999999999999999999999999999999999999999986


Q ss_pred             c
Q psy17600         91 T   91 (351)
Q Consensus        91 ~   91 (351)
                      .
T Consensus       165 ~  165 (278)
T 1byg_A          165 K  165 (278)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.82  E-value=9.7e-21  Score=178.76  Aligned_cols=86  Identities=23%  Similarity=0.334  Sum_probs=76.3

Q ss_pred             EeeeEEEecCC----cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeccCCCCc
Q psy17600          6 CLKQLRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH--------KLGFIHRDIKPDN   73 (351)
Q Consensus         6 ~~~~~~f~~~~----~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH--------~~~iihrDlkp~N   73 (351)
                      +..+..+.+..    .+|+||||+++|+|.+++.+ ..+++..+..++.|++.||.|||        ++||+||||||+|
T Consensus        99 ~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~N  177 (342)
T 1b6c_B           99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN  177 (342)
T ss_dssp             CCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGG
T ss_pred             EEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHH
Confidence            34444556554    89999999999999999976 46899999999999999999999        8999999999999


Q ss_pred             EEecCCCcEEEEecCcccc
Q psy17600         74 LLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~~   92 (351)
                      |+++.++.+||+|||++..
T Consensus       178 Ill~~~~~~kL~Dfg~~~~  196 (342)
T 1b6c_B          178 ILVKKNGTCCIADLGLAVR  196 (342)
T ss_dssp             EEECTTSCEEECCCTTCEE
T ss_pred             EEECCCCCEEEEECCCcee
Confidence            9999999999999999753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.81  E-value=5.2e-20  Score=170.75  Aligned_cols=179  Identities=22%  Similarity=0.299  Sum_probs=133.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +.+..+..+.+...+|+|||||+||+|..++.. ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+
T Consensus        77 ~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  156 (302)
T 2j7t_A           77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDI  156 (302)
T ss_dssp             TBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCE
T ss_pred             CEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCE
Confidence            344556678888999999999999999998865 4679999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcC-------CCcccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHHc
Q psy17600         83 KLSDFGLCTGLKK-------SHRTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVMS  132 (351)
Q Consensus        83 kl~DFGla~~~~~-------~~~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~  132 (351)
                      ||+|||++.....       ...+..|..+           .+....|.            +.+||...+.......+..
T Consensus       157 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  236 (302)
T 2j7t_A          157 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK  236 (302)
T ss_dssp             EECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             EEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhc
Confidence            9999998743211       0112222221           11122232            3689998888887777765


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        133 WRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      ... ...+....++.+..++|.++ ..+|.+|.+    ++++.   .||||+++.|...
T Consensus       237 ~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll---~h~~~~~~~~~~~  287 (302)
T 2j7t_A          237 SDP-PTLLTPSKWSVEFRDFLKIALDKNPETRPS----AAQLL---EHPFVSSITSNKA  287 (302)
T ss_dssp             SCC-CCCSSGGGSCHHHHHHHHHHSCSCTTTSCC----HHHHT---TSTTTTTCCCCHH
T ss_pred             cCC-cccCCccccCHHHHHHHHHHcccChhhCCC----HHHHh---cChHHhhhccchh
Confidence            432 11222234688999999994 579999986    55666   8999999998754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.81  E-value=5.7e-21  Score=192.71  Aligned_cols=86  Identities=21%  Similarity=0.366  Sum_probs=75.2

Q ss_pred             EeeeEEEecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLRMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.++..+. ...+|||||||.+|+|.+++..  ...+++..+..++.||+.||.|||+++||||||||+|||++.++.+|
T Consensus       325 v~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~k  403 (535)
T 2h8h_A          325 VQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK  403 (535)
T ss_dssp             CCEEEEEC-SSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             eeEEEEEe-eccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEE
Confidence            33444444 4789999999999999999964  24689999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       404 l~DFG~a~~  412 (535)
T 2h8h_A          404 VADFGLARL  412 (535)
T ss_dssp             ECCTTSTTT
T ss_pred             Eccccccee
Confidence            999999753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.81  E-value=1.9e-20  Score=175.14  Aligned_cols=87  Identities=28%  Similarity=0.392  Sum_probs=78.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ..+..+..+.+...+|+||| +.+|+|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++ ++.+|
T Consensus        89 ~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~k  166 (313)
T 3cek_A           89 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLK  166 (313)
T ss_dssp             TBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEE
T ss_pred             ceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEE
Confidence            34556667888899999999 67899999999888899999999999999999999999999999999999996 58999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+++.
T Consensus       167 L~Dfg~~~~  175 (313)
T 3cek_A          167 LIDFGIANQ  175 (313)
T ss_dssp             ECCCSSSCC
T ss_pred             Eeecccccc
Confidence            999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.81  E-value=1.2e-20  Score=180.11  Aligned_cols=74  Identities=28%  Similarity=0.533  Sum_probs=66.8

Q ss_pred             cEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEec------CCCcEEEEec
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLD------ARGHIKLSDF   87 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~------~~~~~kl~DF   87 (351)
                      .+|+||||+ |++|.+++...  ..+++..+..++.|++.||.|||++ ||+||||||+|||++      ..+.+||+||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Df  182 (373)
T 1q8y_A          104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL  182 (373)
T ss_dssp             EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred             eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccc
Confidence            789999999 89999999763  4589999999999999999999998 999999999999994      3448999999


Q ss_pred             Cccc
Q psy17600         88 GLCT   91 (351)
Q Consensus        88 Gla~   91 (351)
                      |++.
T Consensus       183 g~a~  186 (373)
T 1q8y_A          183 GNAC  186 (373)
T ss_dssp             TTCE
T ss_pred             cccc
Confidence            9974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.81  E-value=3.3e-20  Score=174.09  Aligned_cols=188  Identities=18%  Similarity=0.221  Sum_probs=119.8

Q ss_pred             EeeeEEEecCCcE------EEEEecCCCCCHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy17600          6 CLKQLRMSDPINL------YLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN   73 (351)
Q Consensus         6 ~~~~~~f~~~~~l------ylVmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~N   73 (351)
                      +..+..+.+....      |+||||+.||+|.+++....      .+++..+..++.|++.||.|||++||+||||||+|
T Consensus        88 v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~N  167 (323)
T 3qup_A           88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN  167 (323)
T ss_dssp             CCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcce
Confidence            3344455555444      99999999999999986432      58999999999999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCccccCcCCCc---------ccccccC------CCCCCccc-------------CCCCCCCCCHHH
Q psy17600         74 LLLDARGHIKLSDFGLCTGLKKSHR---------TDFYRDL------SQAKPSDF-------------SYPPFCSENPQE  125 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~~~~~~~~---------~~~~~~~------~~~~~~~~-------------~~~Pf~~~~~~~  125 (351)
                      |+++.++.+||+|||+++.......         +..|..+      .+....|.             +.+||.+.+..+
T Consensus       168 Ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  247 (323)
T 3qup_A          168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE  247 (323)
T ss_dssp             EEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH
Confidence            9999999999999999975432211         0111111      11112221             368999998888


Q ss_pred             HHHHHHcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCC
Q psy17600        126 TYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAA  196 (351)
Q Consensus       126 ~~~~i~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~  196 (351)
                      .+..+.... ....|.  .+++++.++|.+ |..+|.+|.....=.+.+++...|||+.+..++.|.....+
T Consensus       248 ~~~~~~~~~-~~~~~~--~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~~~~~  316 (323)
T 3qup_A          248 IYNYLIGGN-RLKQPP--ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIER  316 (323)
T ss_dssp             HHHHHHTTC-CCCCCT--TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------------
T ss_pred             HHHHHhcCC-CCCCCC--ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCc
Confidence            888887643 233333  478999999999 55799999875433444555558999999888887665443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.81  E-value=1.3e-20  Score=179.75  Aligned_cols=77  Identities=27%  Similarity=0.586  Sum_probs=68.2

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +...+|+||||+. |+|.+.+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus       105 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  182 (362)
T 3pg1_A          105 AMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR  182 (362)
T ss_dssp             TCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC--
T ss_pred             CcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccc
Confidence            3447899999998 6888887654 468999999999999999999999999999999999999999999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.81  E-value=4.7e-21  Score=175.80  Aligned_cols=79  Identities=35%  Similarity=0.690  Sum_probs=71.5

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeccCCCCcEEecCCCcEE
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDSIHKLG-----FIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~al~~lH~~~-----iihrDlkp~Nill~~~~~~k   83 (351)
                      ++...+|+||||++||+|.+++...    ..+++..+..++.|++.||.|||+++     |+||||||+||+++.++.+|
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~k  156 (279)
T 2w5a_A           77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK  156 (279)
T ss_dssp             GGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEE
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEE
Confidence            4567899999999999999999753    34899999999999999999999999     99999999999999999999


Q ss_pred             EEecCccc
Q psy17600         84 LSDFGLCT   91 (351)
Q Consensus        84 l~DFGla~   91 (351)
                      |+|||++.
T Consensus       157 l~dfg~~~  164 (279)
T 2w5a_A          157 LGDFGLAR  164 (279)
T ss_dssp             ECCCCHHH
T ss_pred             EecCchhe
Confidence            99999974

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.81  E-value=1.9e-21  Score=186.68  Aligned_cols=166  Identities=19%  Similarity=0.236  Sum_probs=115.4

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCC-CCCHHHH------HHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKD-TLSEECT------QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~------~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      .++|||||||. |+|.+++...+ .+.+...      ..++.|++.||.|||++||+||||||+|||++.+|.+||+|||
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG  239 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVS  239 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGG
T ss_pred             eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecc
Confidence            44899999999 89999997632 3333333      4555999999999999999999999999999999999999999


Q ss_pred             ccccCcCCC----cccccccC--------CCCCCccc------------CCCCCCCCCHHH--HHHH---HHcCCCceeC
Q psy17600         89 LCTGLKKSH----RTDFYRDL--------SQAKPSDF------------SYPPFCSENPQE--TYRK---VMSWRDTLVF  139 (351)
Q Consensus        89 la~~~~~~~----~~~~~~~~--------~~~~~~~~------------~~~Pf~~~~~~~--~~~~---i~~~~~~~~~  139 (351)
                      +++......    .+..|..+        .+....|.            +.+||.+.++..  .+..   .........+
T Consensus       240 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (371)
T 3q60_A          240 ALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAF  319 (371)
T ss_dssp             GEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCC
T ss_pred             eeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccch
Confidence            997654322    11222211        11222222            267887664321  1111   1111223445


Q ss_pred             CCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        140 PPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       140 p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                      |....++++++++|.++ ..+|.+|.+    ++++.   .||||++++|..
T Consensus       320 ~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l---~hp~f~~~~~~~  363 (371)
T 3q60_A          320 GSCTPLPDFVKTLIGRFLNFDRRRRLL----PLEAM---ETPEFLQLQNEI  363 (371)
T ss_dssp             TTSSCCCHHHHHHHHHHTCSSTTTCCC----HHHHT---TSHHHHHHHHHH
T ss_pred             hhccCCCHHHHHHHHHHcCCChhhCCC----HHHHh---cCHHHHHHHHHH
Confidence            55456899999999995 579999997    45666   899999998874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.81  E-value=1.4e-20  Score=175.83  Aligned_cols=87  Identities=31%  Similarity=0.501  Sum_probs=75.2

Q ss_pred             eEeeeEEEecCCcEEEEEec-CCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy-~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~~   82 (351)
                      ++..+..+.+....|+|||| +.+++|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++ .++.+
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  179 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA  179 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEE
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeE
Confidence            44455567788899999999 78999999998888899999999999999999999999999999999999999 88999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||++.
T Consensus       180 kl~dfg~~~  188 (312)
T 2iwi_A          180 KLIDFGSGA  188 (312)
T ss_dssp             EECCCSSCE
T ss_pred             EEEEcchhh
Confidence            999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.81  E-value=1.3e-19  Score=165.77  Aligned_cols=172  Identities=23%  Similarity=0.356  Sum_probs=126.4

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      .+..+..+.+...+|+||||++||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  146 (276)
T 2yex_A           67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI  146 (276)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             ceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEE
Confidence            44455678888999999999999999999977778999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCcCCC---------cccccccCCC-------CCCccc------------CCCCCCCCCHH-HHHHHHHcCCC
Q psy17600         85 SDFGLCTGLKKSH---------RTDFYRDLSQ-------AKPSDF------------SYPPFCSENPQ-ETYRKVMSWRD  135 (351)
Q Consensus        85 ~DFGla~~~~~~~---------~~~~~~~~~~-------~~~~~~------------~~~Pf~~~~~~-~~~~~i~~~~~  135 (351)
                      +|||++.......         .+..|..+..       ....|.            +..||.+.+.. ..+..+.... 
T Consensus       147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-  225 (276)
T 2yex_A          147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-  225 (276)
T ss_dssp             CCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC-
T ss_pred             eeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc-
Confidence            9999987543211         1122222211       111222            26888765543 3344444321 


Q ss_pred             ceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        136 TLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                       ...+....+++++.++|.++ ..+|.+|.+    ++++.   .||||++.
T Consensus       226 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il---~~~~~~~~  268 (276)
T 2yex_A          226 -TYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIK---KDRWYNKP  268 (276)
T ss_dssp             -TTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHT---TCTTTTCC
T ss_pred             -cccCchhhcCHHHHHHHHHHCCCCchhCCC----HHHHh---cCccccCh
Confidence             12232234789999999995 479999986    56776   88999854

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.81  E-value=2.8e-20  Score=174.67  Aligned_cols=80  Identities=34%  Similarity=0.562  Sum_probs=71.4

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEecCCCcEEEEec
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      .+...+|+||||+. |+|.+++..   .+.+++..+..++.|++.||.|||++|  |+||||||+||+++.++.+||+||
T Consensus       104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence            34456899999996 789888864   467999999999999999999999999  999999999999999999999999


Q ss_pred             CccccC
Q psy17600         88 GLCTGL   93 (351)
Q Consensus        88 Gla~~~   93 (351)
                      |+++..
T Consensus       183 g~~~~~  188 (337)
T 3ll6_A          183 GSATTI  188 (337)
T ss_dssp             TTCBCC
T ss_pred             ccceec
Confidence            998654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.81  E-value=1.9e-20  Score=176.37  Aligned_cols=78  Identities=29%  Similarity=0.523  Sum_probs=71.5

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...+|+||||++||+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus       116 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          116 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             --CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            34789999999999999999875 4589999999999999999999999999999999999999999999999999754

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.81  E-value=3.6e-20  Score=174.26  Aligned_cols=87  Identities=30%  Similarity=0.439  Sum_probs=77.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-----KDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLD   77 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~   77 (351)
                      +++..+..+.+...+|+||||+.| +|.+++..     ...+++..+..++.|++.||.|||++ ||+||||||+||+++
T Consensus        82 niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~  160 (327)
T 3aln_A           82 YIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD  160 (327)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE
T ss_pred             cEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc
Confidence            345566678889999999999985 78777753     56789999999999999999999999 999999999999999


Q ss_pred             CCCcEEEEecCccc
Q psy17600         78 ARGHIKLSDFGLCT   91 (351)
Q Consensus        78 ~~~~~kl~DFGla~   91 (351)
                      .++.+||+|||+++
T Consensus       161 ~~~~~kl~Dfg~~~  174 (327)
T 3aln_A          161 RSGNIKLCDFGISG  174 (327)
T ss_dssp             TTTEEEECCCSSSC
T ss_pred             CCCCEEEccCCCce
Confidence            99999999999974

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.81  E-value=3.1e-20  Score=178.48  Aligned_cols=83  Identities=30%  Similarity=0.505  Sum_probs=71.3

Q ss_pred             EeeeEEEecCCcE------EEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          6 CLKQLRMSDPINL------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         6 ~~~~~~f~~~~~l------ylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      +..+..|.+...+      |+||||+. |+|.+.+.  ..+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus       104 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  180 (371)
T 4exu_A          104 IGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  180 (371)
T ss_dssp             CCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             hhhhhheeccCCcccceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC
Confidence            3444556665544      99999997 68888774  459999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCccc
Q psy17600         80 GHIKLSDFGLCT   91 (351)
Q Consensus        80 ~~~kl~DFGla~   91 (351)
                      +.+||+|||+++
T Consensus       181 ~~~kL~Dfg~a~  192 (371)
T 4exu_A          181 CELKILDFGLAR  192 (371)
T ss_dssp             CCEEECSTTCC-
T ss_pred             CCEEEEecCccc
Confidence            999999999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.81  E-value=1.9e-20  Score=175.09  Aligned_cols=79  Identities=25%  Similarity=0.508  Sum_probs=72.8

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL   89 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGl   89 (351)
                      +...+|+||||+.+|+|.+++..    ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus       101 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~  180 (317)
T 2buj_A          101 AKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS  180 (317)
T ss_dssp             TEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred             CCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence            34578999999999999999875    46799999999999999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         90 CTG   92 (351)
Q Consensus        90 a~~   92 (351)
                      +..
T Consensus       181 ~~~  183 (317)
T 2buj_A          181 MNQ  183 (317)
T ss_dssp             CEE
T ss_pred             chh
Confidence            754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.81  E-value=3e-19  Score=169.67  Aligned_cols=166  Identities=20%  Similarity=0.272  Sum_probs=119.3

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ...+|+|||||.| +|...+... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            4578999999985 777777643 57999999999999999999999999999999999999999999999999998754


Q ss_pred             cCCC-----------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCCC
Q psy17600         94 KKSH-----------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEV  143 (351)
Q Consensus        94 ~~~~-----------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~  143 (351)
                      ....           .+..|..+       .+....|.            +.+||.+.+.......+......+......
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  254 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP  254 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            3111           11222221       12222332            268999988887777665422211110000


Q ss_pred             C----------------------------CCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        144 P----------------------------ISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       144 ~----------------------------~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                      .                            .+++++++|.++ ..||.+|++    ++++.   .||||.+..+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~f~~~~~~  321 (351)
T 3mi9_A          255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDAL---NHDFFWSDPMP  321 (351)
T ss_dssp             TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGGSSSCC
T ss_pred             ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCC----HHHHh---CCCCcCCCCCc
Confidence            0                            267899999995 579999997    56777   88999865443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.81  E-value=3.3e-19  Score=165.09  Aligned_cols=180  Identities=20%  Similarity=0.297  Sum_probs=123.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEe
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK--------KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL   76 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~--------~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill   76 (351)
                      ++..+..+.+...+|+||||++||+|.+++..        ...+++..+..++.|++.||.|||++||+||||||+||++
T Consensus        75 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~  154 (303)
T 2vwi_A           75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL  154 (303)
T ss_dssp             BCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE
T ss_pred             EeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE
Confidence            44556678888999999999999999999873        4568999999999999999999999999999999999999


Q ss_pred             cCCCcEEEEecCccccCcCCC------------cccccccC-------CCCCCccc------------CCCCCCCCCHHH
Q psy17600         77 DARGHIKLSDFGLCTGLKKSH------------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQE  125 (351)
Q Consensus        77 ~~~~~~kl~DFGla~~~~~~~------------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~  125 (351)
                      +.++.+||+|||++.......            .+..|..+       .+....|.            +..||.+.+...
T Consensus       155 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  234 (303)
T 2vwi_A          155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK  234 (303)
T ss_dssp             CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh
Confidence            999999999999986543211            11111111       11222222            368898877666


Q ss_pred             HHHHHHcCCCceeCC-------CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhc
Q psy17600        126 TYRKVMSWRDTLVFP-------PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRE  192 (351)
Q Consensus       126 ~~~~i~~~~~~~~~p-------~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~  192 (351)
                      .......... ...+       .....+++.+++|.++ ..+|.+|..    +.++.   .||||+...+..+.+
T Consensus       235 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll---~h~~~~~~~~~~~~q  301 (303)
T 2vwi_A          235 VLMLTLQNDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELL---RHKFFQKAKNKEFLQ  301 (303)
T ss_dssp             HHHHHHTSSC-CCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCC----HHHHH---TSTTC----------
T ss_pred             HHHHHhccCC-CccccccccchhhhhhhHHHHHHHHHHccCChhhCcC----HHHHh---hChhhhcCCCCcccc
Confidence            5554443221 1111       1123678999999994 579999986    56777   889999988876643

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.81  E-value=3.2e-19  Score=167.23  Aligned_cols=168  Identities=24%  Similarity=0.371  Sum_probs=124.8

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +...+|+||||+. |+|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            5678999999998 69999998653  48999999999999999999999999999999999999999999999999987


Q ss_pred             cCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC---ceeCCC---
Q psy17600         92 GLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRD---TLVFPP---  141 (351)
Q Consensus        92 ~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~---~~~~p~---  141 (351)
                      .......      +..|..      ..+....|.            +.+||.+.+.......+.....   ...+|.   
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA  248 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence            5542211      111211      111222232            3689999888887777653111   001110   


Q ss_pred             -----------------CCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        142 -----------------EVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       142 -----------------~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                                       ...++++++++|.++ ..+|.+|..    +.++.   .||||++++|..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l---~hp~~~~~~~~~  307 (326)
T 1blx_A          249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSAL---SHPYFQDLERCK  307 (326)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHH---TSGGGTTCCCCC
T ss_pred             cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCC----HHHHh---cCccccccchhh
Confidence                             123788999999994 579999986    56777   899999998764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.80  E-value=1.6e-20  Score=173.20  Aligned_cols=84  Identities=26%  Similarity=0.383  Sum_probs=74.4

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      .+..+.+ ..+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|
T Consensus        86 ~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~D  164 (291)
T 1u46_A           86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD  164 (291)
T ss_dssp             EEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECC
T ss_pred             EEEEEcc-CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcc
Confidence            3444444 4589999999999999999764 5689999999999999999999999999999999999999999999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||++..
T Consensus       165 fg~~~~  170 (291)
T 1u46_A          165 FGLMRA  170 (291)
T ss_dssp             CTTCEE
T ss_pred             cccccc
Confidence            999754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.80  E-value=3.5e-19  Score=166.21  Aligned_cols=179  Identities=22%  Similarity=0.328  Sum_probs=133.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      .+..+..+.+...+|+||||+.||+|.+++. ....+++..+..++.|++.||.|||++|++|+||||+||+++.++.+|
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~k  165 (314)
T 3com_A           86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAK  165 (314)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEE
Confidence            4445566788899999999999999999986 456799999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||++.......       .+..|..+      .+....|.            +..||...+.......+.... ...
T Consensus       166 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~  244 (314)
T 3com_A          166 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP-PPT  244 (314)
T ss_dssp             ECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCC
T ss_pred             EeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-Ccc
Confidence            99999987543221       11112111      11222232            368998887766655554321 122


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhh
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR  191 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~  191 (351)
                      ++....++.+..++|.++ ..+|.+|..    ++++.   .||||++..+....
T Consensus       245 ~~~~~~~~~~l~~li~~~l~~dp~~Rpt----~~~ll---~~~~~~~~~~~~~~  291 (314)
T 3com_A          245 FRKPELWSDNFTDFVKQCLVKSPEQRAT----ATQLL---QHPFVRSAKGVSIL  291 (314)
T ss_dssp             CSSGGGSCHHHHHHHHHHTCSCTTTSCC----HHHHT---TSHHHHTCCCGGGG
T ss_pred             cCCcccCCHHHHHHHHHHccCChhhCcC----HHHHH---hCHHHhcCCcchHH
Confidence            222223688999999994 579999986    56666   89999998877654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.80  E-value=3.7e-19  Score=166.92  Aligned_cols=167  Identities=25%  Similarity=0.378  Sum_probs=124.4

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ...+|+||||+.+|+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  178 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  178 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence            56899999999999999999864  5689999999999999999999999999999999999999999999999999875


Q ss_pred             CcCCC-------cccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCCC
Q psy17600         93 LKKSH-------RTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE  142 (351)
Q Consensus        93 ~~~~~-------~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  142 (351)
                      .....       .+..|..+           .+....|.            +.+||.+.+.......+......  ....
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~  256 (326)
T 2x7f_A          179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP--RLKS  256 (326)
T ss_dssp             ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--CCSC
T ss_pred             cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc--cCCc
Confidence            43211       11222211           11222232            26899988887776666543211  1112


Q ss_pred             CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        143 VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       143 ~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      ..++++.+++|.++ ..+|.+|..    ++++.   .||||++..++..
T Consensus       257 ~~~~~~l~~li~~~l~~dp~~Rps----~~~ll---~hp~~~~~~~~~~  298 (326)
T 2x7f_A          257 KKWSKKFQSFIESCLVKNHSQRPA----TEQLM---KHPFIRDQPNERQ  298 (326)
T ss_dssp             SCSCHHHHHHHHHHCCSSGGGSCC----HHHHH---TSHHHHCCTTHHH
T ss_pred             cccCHHHHHHHHHHhccChhhCCC----HHHHh---hChHHhhCccccc
Confidence            34789999999995 479999986    56777   8899998877653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.80  E-value=3.7e-19  Score=164.32  Aligned_cols=169  Identities=22%  Similarity=0.388  Sum_probs=121.9

Q ss_pred             cCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      +...+|+||||++||+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  165 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKN  165 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSC
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhh
Confidence            3567899999999999999998543 578888999999999999999999999999999999999999999999999875


Q ss_pred             CcCCC---------------------cccccccC-------CCCCCcccC---------CCCCCC-CCHHHHHHHHHcCC
Q psy17600         93 LKKSH---------------------RTDFYRDL-------SQAKPSDFS---------YPPFCS-ENPQETYRKVMSWR  134 (351)
Q Consensus        93 ~~~~~---------------------~~~~~~~~-------~~~~~~~~~---------~~Pf~~-~~~~~~~~~i~~~~  134 (351)
                      .....                     .+..|..+       .+....|.|         ..||.. .+.......+... 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~-  244 (303)
T 1zy4_A          166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSV-  244 (303)
T ss_dssp             TTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHST-
T ss_pred             cccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhcccc-
Confidence            53211                     01111111       111222221         246553 3444555666543 


Q ss_pred             CceeCCCCC--CCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhh
Q psy17600        135 DTLVFPPEV--PISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIR  191 (351)
Q Consensus       135 ~~~~~p~~~--~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~  191 (351)
                       ...+|+..  ..++.++++|.++ ..+|.+|.+    ++++.   .||||+...++...
T Consensus       245 -~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll---~h~~~~~~~~~~~~  296 (303)
T 1zy4_A          245 -SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG----ARTLL---NSGWLPVKHQDEVI  296 (303)
T ss_dssp             -TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC----HHHHH---HSSCSCCCCHHHHH
T ss_pred             -ccccCccccccchHHHHHHHHHHHhcCcccCcC----HHHHh---CCCCcCCCChHHHH
Confidence             33444432  3567899999994 579999986    56777   78999998888653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.80  E-value=4.1e-19  Score=164.93  Aligned_cols=171  Identities=19%  Similarity=0.325  Sum_probs=125.7

Q ss_pred             eeeEEE--ecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          7 LKQLRM--SDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         7 ~~~~~f--~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ..+..+  ++...+|+|||||.+| |.+++..  ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+
T Consensus        70 ~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~  148 (305)
T 2wtk_C           70 QLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTL  148 (305)
T ss_dssp             CEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             EEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcE
Confidence            334444  4556899999999987 7777765  3568999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCC---------cccccccCCC--------CCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         83 KLSDFGLCTGLKKSH---------RTDFYRDLSQ--------AKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        83 kl~DFGla~~~~~~~---------~~~~~~~~~~--------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      ||+|||++.......         .+..|..+..        ....|.            +..||.+.+..+.+..+...
T Consensus       149 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~  228 (305)
T 2wtk_C          149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG  228 (305)
T ss_dssp             EECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC
T ss_pred             EeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC
Confidence            999999987543211         1122222110        111222            36899999999988888764


Q ss_pred             CCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        134 RDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                        ...+|.  ..+++..++|.++ ..+|.+|..    ++++.   .||||+......
T Consensus       229 --~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll---~~~~~~~~~~~~  274 (305)
T 2wtk_C          229 --SYAIPG--DCGPPLSDLLKGMLEYEPAKRFS----IRQIR---QHSWFRKKHPPA  274 (305)
T ss_dssp             --CCCCCS--SSCHHHHHHHHHHTCSSTTTSCC----HHHHH---HSHHHHSCCCC-
T ss_pred             --CCCCCC--ccCHHHHHHHHHHccCChhhCCC----HHHHh---cCcccccCCCCc
Confidence              334444  3789999999994 579999986    56777   789998765543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.80  E-value=2.8e-19  Score=167.47  Aligned_cols=190  Identities=18%  Similarity=0.142  Sum_probs=136.2

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL   74 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Ni   74 (351)
                      ++..+..+.+...+|+|||||+||+|.+++...          ..+++..+..++.|++.||.|||++||+||||||+||
T Consensus        90 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NI  169 (322)
T 1p4o_A           90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC  169 (322)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGE
T ss_pred             EeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceE
Confidence            445556678888999999999999999998752          3568899999999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCccccCcCCCc---------ccccccC------CCCCCccc-------------CCCCCCCCCHHHH
Q psy17600         75 LLDARGHIKLSDFGLCTGLKKSHR---------TDFYRDL------SQAKPSDF-------------SYPPFCSENPQET  126 (351)
Q Consensus        75 ll~~~~~~kl~DFGla~~~~~~~~---------~~~~~~~------~~~~~~~~-------------~~~Pf~~~~~~~~  126 (351)
                      +++.++.+||+|||+++.......         +..|..+      .+....|.             +..||.+.+..+.
T Consensus       170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  249 (322)
T 1p4o_A          170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV  249 (322)
T ss_dssp             EECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred             EEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence            999999999999999875432211         1112111      11112221             3689999998888


Q ss_pred             HHHHHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        127 YRKVMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       127 ~~~i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      ...+.... ....|  ..++++..++|.++ ..+|.+|.....=...++++ ..++|+.++|....+...+.|
T Consensus       250 ~~~~~~~~-~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~-~~~~~~~~~~~~~~~~~~~~~  318 (322)
T 1p4o_A          250 LRFVMEGG-LLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEPGFREVSFYYSEENKLPEP  318 (322)
T ss_dssp             HHHHHTTC-CCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG-SCTTHHHHCSTTSTTC-----
T ss_pred             HHHHHcCC-cCCCC--CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh-hccCCcccccccccccCCCCh
Confidence            88887642 22223  34789999999994 57999998754333344444 458888888877666555444

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.80  E-value=3.5e-20  Score=192.00  Aligned_cols=84  Identities=23%  Similarity=0.386  Sum_probs=69.8

Q ss_pred             eEeeeEEEecCCc-----EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          5 ACLKQLRMSDPIN-----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         5 ~~~~~~~f~~~~~-----lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      ++..+..|++...     +|||||||+|++|.+++..  .+++..+..++.|++.||.|||++|||||||||+|||++.+
T Consensus       141 iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~  218 (681)
T 2pzi_A          141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE  218 (681)
T ss_dssp             BCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS
T ss_pred             cCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC
Confidence            3444455555544     7999999999999988754  79999999999999999999999999999999999999875


Q ss_pred             CcEEEEecCccc
Q psy17600         80 GHIKLSDFGLCT   91 (351)
Q Consensus        80 ~~~kl~DFGla~   91 (351)
                       .+||+|||+++
T Consensus       219 -~~kl~DFG~a~  229 (681)
T 2pzi_A          219 -QLKLIDLGAVS  229 (681)
T ss_dssp             -CEEECCCTTCE
T ss_pred             -cEEEEecccch
Confidence             89999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.79  E-value=2.8e-19  Score=164.66  Aligned_cols=171  Identities=22%  Similarity=0.296  Sum_probs=116.7

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLM----KKDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDA   78 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~   78 (351)
                      +.+..+..+.+...+|+||||+.| +|.+++.    ....+++..+..++.|++.||.|||++ ||+||||||+||+++.
T Consensus        67 ~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~  145 (290)
T 3fme_A           67 FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA  145 (290)
T ss_dssp             TBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT
T ss_pred             eEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence            345566678899999999999974 8777664    356799999999999999999999998 9999999999999999


Q ss_pred             CCcEEEEecCccccCcCCCc------ccccccCC----------CCCCccc------------CCCCCCC-CCHHHHHHH
Q psy17600         79 RGHIKLSDFGLCTGLKKSHR------TDFYRDLS----------QAKPSDF------------SYPPFCS-ENPQETYRK  129 (351)
Q Consensus        79 ~~~~kl~DFGla~~~~~~~~------~~~~~~~~----------~~~~~~~------------~~~Pf~~-~~~~~~~~~  129 (351)
                      ++.+||+|||+++.......      +..|..+.          +....|.            +..||.. ..+......
T Consensus       146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  225 (290)
T 3fme_A          146 LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ  225 (290)
T ss_dssp             TCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH
T ss_pred             CCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH
Confidence            99999999999875433221      11121111          1111222            2678875 444444444


Q ss_pred             HHcCCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        130 VMSWRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       130 i~~~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +.... ....+ ...+++++.++|.++ ..+|.+|.+    ++++.   .||||+.
T Consensus       226 ~~~~~-~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt----~~e~l---~hp~f~~  272 (290)
T 3fme_A          226 VVEEP-SPQLP-ADKFSAEFVDFTSQCLKKNSKERPT----YPELM---QHPFFTL  272 (290)
T ss_dssp             HHHSC-CCCCC-TTTSCHHHHHHHHHHTCSSGGGSCC----HHHHT---TSHHHHH
T ss_pred             HhccC-CCCcc-cccCCHHHHHHHHHHhhcChhhCcC----HHHHH---hCccccc
Confidence            44322 22222 234789999999994 579999986    56666   8899964

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.79  E-value=4.7e-19  Score=168.04  Aligned_cols=175  Identities=22%  Similarity=0.401  Sum_probs=125.4

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ...+|+||||+. |+|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        86 ~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           86 FNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             CCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            478999999997 689998876 579999999999999999999999999999999999999999999999999987553


Q ss_pred             CCC-----------------cccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce-
Q psy17600         95 KSH-----------------RTDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL-  137 (351)
Q Consensus        95 ~~~-----------------~~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~-  137 (351)
                      ...                 .+..|..+.       +....|.            +.+||.+.+.......+....+.. 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH  243 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence            211                 111122111       1112222            368999888766555443211100 


Q ss_pred             ---------------------eCCCC------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        138 ---------------------VFPPE------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       138 ---------------------~~p~~------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                                           .++..      ..++++++++|.++ ..+|.+|.+    ++++.   .||||+.+.|..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell---~hp~~~~~~~~~  316 (353)
T 2b9h_A          244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT----AKEAL---EHPYLQTYHDPN  316 (353)
T ss_dssp             STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGTTTCCTT
T ss_pred             hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCC----HHHHh---cCccccccCCcc
Confidence                                 01110      24789999999995 479999986    56777   889999988876


Q ss_pred             hhcCCCCCC
Q psy17600        190 IRERPAAIP  198 (351)
Q Consensus       190 l~~~~~~~~  198 (351)
                      ......+.|
T Consensus       317 ~~~~~~~~~  325 (353)
T 2b9h_A          317 DEPEGEPIP  325 (353)
T ss_dssp             SSCCCCCCC
T ss_pred             cccccCCCC
Confidence            544433433

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.79  E-value=1.2e-19  Score=169.23  Aligned_cols=87  Identities=30%  Similarity=0.484  Sum_probs=74.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKL-GFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~-~iihrDlkp~Nill~~~~~   81 (351)
                      +++..+..+.+...+|+||||+ ++.+..+... ...+++..+..++.|++.||.|||++ ||+||||||+||+++.++.
T Consensus        85 ~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~  163 (318)
T 2dyl_A           85 YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ  163 (318)
T ss_dssp             TBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSC
T ss_pred             ceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCC
Confidence            3455666788899999999999 5566555543 56799999999999999999999995 9999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      +||+|||++.
T Consensus       164 ~kl~dfg~~~  173 (318)
T 2dyl_A          164 IKLCDFGISG  173 (318)
T ss_dssp             EEECCCTTC-
T ss_pred             EEEEECCCch
Confidence            9999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.79  E-value=7.1e-19  Score=168.31  Aligned_cols=161  Identities=22%  Similarity=0.416  Sum_probs=118.9

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCcC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK   95 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~~   95 (351)
                      ..+|+||||+. |+|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus       103 ~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          103 KDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             CCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             ceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            47999999997 599998866 4699999999999999999999999999999999999999999999999999975432


Q ss_pred             CC----------cccccccCC-------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce---------
Q psy17600         96 SH----------RTDFYRDLS-------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL---------  137 (351)
Q Consensus        96 ~~----------~~~~~~~~~-------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~---------  137 (351)
                      ..          .+..|..+.       +....|.            +.+||.+.+..+....+....+..         
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  260 (364)
T 3qyz_A          181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII  260 (364)
T ss_dssp             GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred             CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence            21          122222211       2222232            368999888777666654211100         


Q ss_pred             ---------eCCC---------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        138 ---------VFPP---------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       138 ---------~~p~---------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                               ..|.         ...+++++.++|.+ |..+|.+|.+    ++++.   .||||+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l---~hp~~~~~  320 (364)
T 3qyz_A          261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQAL---AHPYLEQY  320 (364)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCC----HHHHH---TSGGGTTT
T ss_pred             hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCC----HHHHh---cCcchhhc
Confidence                     0010         02368999999999 5579999986    56777   89999876

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.79  E-value=6.9e-19  Score=165.48  Aligned_cols=170  Identities=24%  Similarity=0.338  Sum_probs=127.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPG-GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~g-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~   81 (351)
                      ..+..+..+.+...+|+||||+.+ ++|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++ .++.
T Consensus       109 ~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  188 (320)
T 3a99_A          109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE  188 (320)
T ss_dssp             SBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE
T ss_pred             CceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCC
Confidence            345566678889999999999986 89999998888899999999999999999999999999999999999999 7799


Q ss_pred             EEEEecCccccCcCCCcccccccCCCCC------------Cccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         82 IKLSDFGLCTGLKKSHRTDFYRDLSQAK------------PSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~~~~~~~~~~------------~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      +||+|||++............++..+..            ..|.            +..||...+      .+..  ...
T Consensus       189 ~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~--~~~  260 (320)
T 3a99_A          189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIR--GQV  260 (320)
T ss_dssp             EEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHH--CCC
T ss_pred             EEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhc--ccc
Confidence            9999999987654332222112222221            1222            256775432      1222  223


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      .++.  .+++++.++|.++ ..+|.+|..    ++++.   .||||+++.+..-
T Consensus       261 ~~~~--~~~~~~~~li~~~l~~dp~~Rps----~~~ll---~hp~~~~~~~~~~  305 (320)
T 3a99_A          261 FFRQ--RVSSECQHLIRWCLALRPSDRPT----FEEIQ---NHPWMQDVLLPQE  305 (320)
T ss_dssp             CCSS--CCCHHHHHHHHHHTCSSGGGSCC----HHHHH---TSGGGSSCCCHHH
T ss_pred             cccc--cCCHHHHHHHHHHccCChhhCcC----HHHHh---cCHhhcCccCccc
Confidence            3443  4789999999994 579999986    56777   8899999877643

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.78  E-value=2.6e-19  Score=184.01  Aligned_cols=77  Identities=29%  Similarity=0.461  Sum_probs=70.4

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc---EEEEecC
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH---IKLSDFG   88 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~---~kl~DFG   88 (351)
                      ....|+|||||+||+|.+++....   .+++..+..++.|++.||.|||++||+||||||+||+++.++.   +||+|||
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            677899999999999999998644   5889999999999999999999999999999999999987764   8999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      ++.
T Consensus       170 ~a~  172 (676)
T 3qa8_A          170 YAK  172 (676)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            975

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.76  E-value=3.8e-18  Score=155.71  Aligned_cols=158  Identities=21%  Similarity=0.266  Sum_probs=113.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCCCCcEEecC---
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG---FIHRDIKPDNLLLDA---   78 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~---iihrDlkp~Nill~~---   78 (351)
                      .+..+..+.+...+|+||||++||+|.+++. ...+++..+..++.|++.||.|||++|   |+||||||+||+++.   
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~  146 (271)
T 3dtc_A           68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVE  146 (271)
T ss_dssp             BCCEEEEECCC--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCS
T ss_pred             EeeEEEEEecCCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccc
Confidence            4455667888889999999999999999885 467999999999999999999999999   999999999999986   


Q ss_pred             -----CCcEEEEecCccccCcCCCcccccccCCCC-----------CCccc------------CCCCCCCCCHHHHHHHH
Q psy17600         79 -----RGHIKLSDFGLCTGLKKSHRTDFYRDLSQA-----------KPSDF------------SYPPFCSENPQETYRKV  130 (351)
Q Consensus        79 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~~~-----------~~~~~------------~~~Pf~~~~~~~~~~~i  130 (351)
                           ++.+||+|||++............++..+.           ...|.            +..||.+.+.......+
T Consensus       147 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  226 (271)
T 3dtc_A          147 NGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV  226 (271)
T ss_dssp             SSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH
T ss_pred             cccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh
Confidence                 678999999999755433222111122222           22222            36899998888887777


Q ss_pred             HcCCCceeCCCCCCCCHHHHHHHHH-HhcCccccCC
Q psy17600        131 MSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG  165 (351)
Q Consensus       131 ~~~~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg  165 (351)
                      .........|  ...+++..++|.+ +..+|.+|..
T Consensus       227 ~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps  260 (271)
T 3dtc_A          227 AMNKLALPIP--STCPEPFAKLMEDCWNPDPHSRPS  260 (271)
T ss_dssp             HTSCCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hcCCCCCCCC--cccCHHHHHHHHHHhcCCcccCcC
Confidence            7644333344  3478999999999 4579999976

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.76  E-value=2.2e-18  Score=160.52  Aligned_cols=168  Identities=22%  Similarity=0.352  Sum_probs=121.1

Q ss_pred             ecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec-CCCcEEEEecCccc
Q psy17600         13 SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHIKLSDFGLCT   91 (351)
Q Consensus        13 ~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~-~~~~~kl~DFGla~   91 (351)
                      .+...+|+||||+. |+|.+++.+ +.+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||+++
T Consensus        92 ~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~  169 (320)
T 2i6l_A           92 TELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR  169 (320)
T ss_dssp             CSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred             cccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence            45678999999998 699998854 6799999999999999999999999999999999999997 56799999999997


Q ss_pred             cCcCCC-----c-----ccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce-----
Q psy17600         92 GLKKSH-----R-----TDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL-----  137 (351)
Q Consensus        92 ~~~~~~-----~-----~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~-----  137 (351)
                      ......     .     +..|..+       .+....|.            +.+||.+.+..+....+.......     
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  249 (320)
T 2i6l_A          170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR  249 (320)
T ss_dssp             CC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHH
T ss_pred             ccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhh
Confidence            543211     0     1112111       11112232            368999988887777665421110     


Q ss_pred             ---------------eCCC------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchh
Q psy17600        138 ---------------VFPP------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDH  189 (351)
Q Consensus       138 ---------------~~p~------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~  189 (351)
                                     ..|.      ...++++++++|.+ |..+|.+|..    ++++.   .||||+..+|..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell---~hp~~~~~~~p~  316 (320)
T 2i6l_A          250 QELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT----AEEAL---SHPYMSIYSFPM  316 (320)
T ss_dssp             HHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC----HHHHH---TSHHHHTTCC--
T ss_pred             hhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC----HHHHh---CCcccccccCcc
Confidence                           0010      01378999999999 4579999986    56777   889999988854

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.76  E-value=1.3e-19  Score=176.88  Aligned_cols=75  Identities=17%  Similarity=0.360  Sum_probs=64.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         16 INLYLIMEFLPGGDMMTLLMK-------KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~-------~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      ..+|++|+++ +++|.+++..       ...+++..+..++.|++.||.|||++|||||||||+|||++.++.+||+|||
T Consensus       178 ~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG  256 (413)
T 3dzo_A          178 LSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE  256 (413)
T ss_dssp             CSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred             cceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence            3577888865 6899988841       2346677788888999999999999999999999999999999999999999


Q ss_pred             ccc
Q psy17600         89 LCT   91 (351)
Q Consensus        89 la~   91 (351)
                      +++
T Consensus       257 ~a~  259 (413)
T 3dzo_A          257 HLV  259 (413)
T ss_dssp             GCE
T ss_pred             cee
Confidence            975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.75  E-value=4.9e-18  Score=161.59  Aligned_cols=174  Identities=21%  Similarity=0.334  Sum_probs=122.1

Q ss_pred             EeeeEEEecCC------cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC
Q psy17600          6 CLKQLRMSDPI------NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR   79 (351)
Q Consensus         6 ~~~~~~f~~~~------~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~   79 (351)
                      +..+..+.+..      .+|+||||+. |+|.+++.  ..+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus        86 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~  162 (353)
T 3coi_A           86 IGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  162 (353)
T ss_dssp             CCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT
T ss_pred             ccHhheEecccccccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCC
Confidence            33444555554      3599999997 68887764  359999999999999999999999999999999999999999


Q ss_pred             CcEEEEecCccccCcCCC----ccccccc-------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         80 GHIKLSDFGLCTGLKKSH----RTDFYRD-------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        80 ~~~kl~DFGla~~~~~~~----~~~~~~~-------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      +.+||+|||++.......    .+..|..       ..+....|.            +.+||.+.+..+....+....+.
T Consensus       163 ~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  242 (353)
T 3coi_A          163 CELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV  242 (353)
T ss_dssp             CCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCB
T ss_pred             CcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            999999999987543221    1112221       112222332            36899998877766665431110


Q ss_pred             --------------------------eeCCC-CCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCch
Q psy17600        137 --------------------------LVFPP-EVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDWD  188 (351)
Q Consensus       137 --------------------------~~~p~-~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~  188 (351)
                                                ..++. ....+++++++|.++ ..+|.+|.+    ++++.   .||||+.+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e~l---~hp~f~~~~~~  315 (353)
T 3coi_A          243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQAL---THPFFEPFRDP  315 (353)
T ss_dssp             CCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCC----HHHHH---TSGGGTTTCCG
T ss_pred             CCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCC----HHHHh---cCcchhhccCc
Confidence                                      01111 123689999999995 579999986    56777   89999977654


Q ss_pred             h
Q psy17600        189 H  189 (351)
Q Consensus       189 ~  189 (351)
                      .
T Consensus       316 ~  316 (353)
T 3coi_A          316 E  316 (353)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.66  E-value=1.2e-17  Score=154.99  Aligned_cols=156  Identities=12%  Similarity=0.033  Sum_probs=104.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..+++...+|+|||||+|++|.+++.+ + .....+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus        92 ~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~k  169 (286)
T 3uqc_A           92 GVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVV  169 (286)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEE
T ss_pred             CcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEE
Confidence            345566678888999999999999999999854 3 45667888999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcccccccCCCCCCcccCCCCCCCCCHHHHHHHH-HcCCCceeCC--CCCCCCHHHHHHHHH-HhcC
Q psy17600         84 LSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKV-MSWRDTLVFP--PEVPISEEARETIVR-FCSE  159 (351)
Q Consensus        84 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~Pf~~~~~~~~~~~i-~~~~~~~~~p--~~~~~s~~~~dli~~-l~~~  159 (351)
                      |+++|....  .....+.|..+........+..||.+.+..+..... .........+  ....++++.+++|.+ |..+
T Consensus       170 l~~~~~~~~--~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  247 (286)
T 3uqc_A          170 LAYPATMPD--ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGD  247 (286)
T ss_dssp             ECSCCCCTT--CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTT
T ss_pred             EEeccccCC--CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccC
Confidence            997776432  112223332111111111235677665442211000 0000111110  012478999999999 5579


Q ss_pred             cccc
Q psy17600        160 CDRR  163 (351)
Q Consensus       160 ~~~r  163 (351)
                      |.+|
T Consensus       248 P~~R  251 (286)
T 3uqc_A          248 GGIR  251 (286)
T ss_dssp             SSCC
T ss_pred             CccC
Confidence            9999

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.46  E-value=1.3e-14  Score=134.56  Aligned_cols=71  Identities=15%  Similarity=0.235  Sum_probs=62.0

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ..+|+|||||+||+|.+ +.    .  ..+..++.|++.||.|||++||+||||||+|||++ ++.+||+|||+|....
T Consensus       173 ~~~~lvmE~~~g~~L~~-l~----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~  243 (282)
T 1zar_A          173 EGNAVLMELIDAKELYR-VR----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVG  243 (282)
T ss_dssp             ETTEEEEECCCCEEGGG-CC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEETT
T ss_pred             cceEEEEEecCCCcHHH-cc----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECC
Confidence            56799999999999987 41    1  23456889999999999999999999999999999 9999999999997553

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.46  E-value=2.9e-14  Score=143.84  Aligned_cols=74  Identities=20%  Similarity=0.278  Sum_probs=66.0

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      ...+..+.|||||||+||+|.+++.+        +..++.|++.||.|||++||+||||||+|||++.  .+||+|||+|
T Consensus       407 ~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla  476 (540)
T 3en9_A          407 FDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLG  476 (540)
T ss_dssp             EEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred             EEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccC
Confidence            33466778999999999999999864        5678999999999999999999999999999998  9999999999


Q ss_pred             ccCc
Q psy17600         91 TGLK   94 (351)
Q Consensus        91 ~~~~   94 (351)
                      +...
T Consensus       477 ~~~~  480 (540)
T 3en9_A          477 KISN  480 (540)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            8653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.27  E-value=1.9e-12  Score=118.07  Aligned_cols=73  Identities=18%  Similarity=0.284  Sum_probs=60.2

Q ss_pred             cEEEEEecCCC-C----CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEecCCCcEEEEecCcc
Q psy17600         17 NLYLIMEFLPG-G----DMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGLC   90 (351)
Q Consensus        17 ~lylVmEy~~g-g----~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH-~~~iihrDlkp~Nill~~~~~~kl~DFGla   90 (351)
                      ..||||||+.+ |    .|.+....   .++..+..++.|++.|+.||| +.||+||||||+|||++.  .++|+|||+|
T Consensus       142 ~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a  216 (258)
T 1zth_A          142 KNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQA  216 (258)
T ss_dssp             TTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTC
T ss_pred             CCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECccc
Confidence            56899999942 4    67665422   235567888999999999999 999999999999999988  9999999999


Q ss_pred             ccCc
Q psy17600         91 TGLK   94 (351)
Q Consensus        91 ~~~~   94 (351)
                      ....
T Consensus       217 ~~~~  220 (258)
T 1zth_A          217 VTLR  220 (258)
T ss_dssp             EETT
T ss_pred             ccCC
Confidence            7653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.94  E-value=2.4e-10  Score=110.18  Aligned_cols=69  Identities=17%  Similarity=0.210  Sum_probs=56.5

Q ss_pred             EEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC----------cEEEEecC
Q psy17600         19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG----------HIKLSDFG   88 (351)
Q Consensus        19 ylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~----------~~kl~DFG   88 (351)
                      +|||||+.|++|..+.    ..  ..+..+..|++.+|.+||+.|||||||||.|||++.+|          .+.|+||+
T Consensus       187 ~LVME~i~G~~L~~l~----~~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~  260 (397)
T 4gyi_A          187 TIVMSLVDALPMRQVS----SV--PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFP  260 (397)
T ss_dssp             EEEEECCSCEEGGGCC----CC--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred             eEEEEecCCccHhhhc----cc--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeC
Confidence            6999999999885432    12  23556778999999999999999999999999998776          37899999


Q ss_pred             ccccC
Q psy17600         89 LCTGL   93 (351)
Q Consensus        89 la~~~   93 (351)
                      -+-..
T Consensus       261 Q~V~~  265 (397)
T 4gyi_A          261 QMVSM  265 (397)
T ss_dssp             TCEET
T ss_pred             CcccC
Confidence            76543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.42  E-value=2.2e-08  Score=93.75  Aligned_cols=45  Identities=33%  Similarity=0.670  Sum_probs=40.8

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+.+|||.|||||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       191 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~  235 (311)
T 4aw0_A          191 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR  235 (311)
T ss_dssp             BCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            346799999999999999999999999999999999999888774

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.37  E-value=5.1e-08  Score=92.62  Aligned_cols=44  Identities=41%  Similarity=0.794  Sum_probs=40.1

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~  271 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF  271 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            46789999999999998899999999999999999998877774

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=98.35  E-value=5.8e-08  Score=90.68  Aligned_cols=44  Identities=50%  Similarity=0.926  Sum_probs=40.2

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       184 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~  227 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ  227 (304)
T ss_dssp             CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCC
Confidence            45789999999999999999999999999999999999888774

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.32  E-value=1.2e-07  Score=87.85  Aligned_cols=43  Identities=28%  Similarity=0.634  Sum_probs=37.8

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+|||.|||||++.+ .|+.++|+||+||++|+|+.+.-+|.
T Consensus       188 ~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~  230 (290)
T 3fpq_A          188 KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  230 (290)
T ss_dssp             EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            35689999999998864 69999999999999999999887774

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.31  E-value=8.4e-08  Score=93.52  Aligned_cols=45  Identities=40%  Similarity=0.772  Sum_probs=40.6

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+.+||+.|||||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~  348 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF  348 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            346789999999999999999999999999999999999877774

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.27  E-value=9.2e-07  Score=79.72  Aligned_cols=76  Identities=20%  Similarity=0.104  Sum_probs=58.7

Q ss_pred             EEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------
Q psy17600         11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-----------------------------   61 (351)
Q Consensus        11 ~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-----------------------------   61 (351)
                      ...+....|+||||++|.+|.+.+.     +......++.++..++..||+                             
T Consensus        78 ~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (263)
T 3tm0_A           78 FERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD  152 (263)
T ss_dssp             EEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred             EEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence            3456778999999999999977531     122234566788888899998                             


Q ss_pred             ------------------------------CCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         62 ------------------------------LGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        62 ------------------------------~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                                                    ..++|+|++|.||+++..+.+.|+||+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                          458999999999999865556799999874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.25  E-value=1e-07  Score=90.78  Aligned_cols=43  Identities=33%  Similarity=0.751  Sum_probs=39.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~  226 (350)
T 4b9d_A          184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE  226 (350)
T ss_dssp             HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            4689999999999999899999999999999999999887774

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.21  E-value=1.7e-07  Score=86.21  Aligned_cols=43  Identities=47%  Similarity=0.809  Sum_probs=33.8

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.+..+ +.++|+||+||++|+|+.+.-+|.
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~  213 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD  213 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCC
Confidence            5689999999999988775 678999999999999998877774

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.12  E-value=1.4e-06  Score=77.72  Aligned_cols=28  Identities=18%  Similarity=0.205  Sum_probs=24.8

Q ss_pred             CeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         64 FIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        64 iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ++|+|++|.||+++.++.+.|+||+.+.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            9999999999999876666799999975

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.10  E-value=4.4e-07  Score=93.11  Aligned_cols=44  Identities=39%  Similarity=0.813  Sum_probs=39.1

Q ss_pred             ccCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+|||.|||||++.+ ..|+.++||||+||++|+|+.+.-+|.
T Consensus       348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~  392 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR  392 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            46799999999999974 579999999999999999999888884

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.10  E-value=7.9e-07  Score=86.05  Aligned_cols=45  Identities=40%  Similarity=0.570  Sum_probs=39.2

Q ss_pred             cccCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+.+||+.|+|||++.+. .++.++|+||+||++|+|+.+.-+|.
T Consensus       219 ~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~  264 (398)
T 4b99_A          219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP  264 (398)
T ss_dssp             CCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             cccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCC
Confidence            3467999999999998875 46899999999999999999887774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.00  E-value=6.7e-06  Score=77.77  Aligned_cols=74  Identities=23%  Similarity=0.333  Sum_probs=59.2

Q ss_pred             CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------
Q psy17600         16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK----------------------------------   61 (351)
Q Consensus        16 ~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~----------------------------------   61 (351)
                      ...|+||||++|..+.+..  ...+++.+...+..++..+|..||+                                  
T Consensus       114 g~~~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (359)
T 3dxp_A          114 GRAFYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET  191 (359)
T ss_dssp             SSCEEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred             CCeEEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence            3479999999998774311  1346777777888899999999997                                  


Q ss_pred             ------------------------CCCeeccCCCCcEEecCCCc--EEEEecCccc
Q psy17600         62 ------------------------LGFIHRDIKPDNLLLDARGH--IKLSDFGLCT   91 (351)
Q Consensus        62 ------------------------~~iihrDlkp~Nill~~~~~--~kl~DFGla~   91 (351)
                                              .+++|+|++|.||+++.++.  +.|+||+.|.
T Consensus       192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence                                    35899999999999987753  6899999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.89  E-value=1.1e-06  Score=89.11  Aligned_cols=43  Identities=37%  Similarity=0.549  Sum_probs=39.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~  357 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG  357 (573)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            4589999999999999999999999999999999998877763

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=97.82  E-value=2.6e-06  Score=79.22  Aligned_cols=38  Identities=37%  Similarity=0.667  Sum_probs=32.5

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhh
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~  317 (351)
                      .+.+||+.|||||++.+..|+.++|+||+||++|+|+.
T Consensus       188 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~  225 (299)
T 4g31_A          188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY  225 (299)
T ss_dssp             ----CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred             CCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence            46789999999999999899999999999999999984

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.80  E-value=3.7e-06  Score=79.45  Aligned_cols=43  Identities=28%  Similarity=0.372  Sum_probs=39.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|||||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~  257 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT  257 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCC
Confidence            4689999999999999999999999999999999999888874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=97.67  E-value=9.7e-06  Score=76.38  Aligned_cols=44  Identities=50%  Similarity=1.023  Sum_probs=38.8

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-+|.
T Consensus       163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  206 (337)
T 1o6l_A          163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY  206 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCC
Confidence            35689999999999998889999999999999999998776663

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=97.65  E-value=6.9e-06  Score=79.29  Aligned_cols=44  Identities=45%  Similarity=0.959  Sum_probs=40.0

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       211 ~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~  254 (396)
T 4dc2_A          211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  254 (396)
T ss_dssp             CCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred             ccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence            35689999999999999899999999999999999999887774

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=97.64  E-value=1e-05  Score=75.43  Aligned_cols=42  Identities=50%  Similarity=1.019  Sum_probs=38.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  203 (318)
T 1fot_A          162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF  203 (318)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCC
Confidence            458999999999999888999999999999999999887666

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.64  E-value=8.9e-06  Score=77.57  Aligned_cols=49  Identities=37%  Similarity=0.579  Sum_probs=37.0

Q ss_pred             cccccccCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        275 RRALAYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       275 ~~~~~~~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ++....+.+||+.|+|||++.+. .++.++|+||+||++|+|+.+.-+|.
T Consensus       199 ~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          199 RRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             -------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             ccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence            34455677999999999999875 47889999999999999998877773

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=97.63  E-value=1.1e-05  Score=77.27  Aligned_cols=43  Identities=44%  Similarity=0.959  Sum_probs=38.5

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|
T Consensus       197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf  239 (373)
T 2r5t_A          197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF  239 (373)
T ss_dssp             CSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence            3568999999999999888999999999999999999877666

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=97.61  E-value=8.6e-06  Score=77.25  Aligned_cols=44  Identities=48%  Similarity=0.999  Sum_probs=39.0

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       179 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~  222 (353)
T 2i0e_A          179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE  222 (353)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCC
Confidence            35689999999999998889999999999999999998877663

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=97.60  E-value=9e-06  Score=76.87  Aligned_cols=44  Identities=52%  Similarity=1.063  Sum_probs=39.1

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  219 (345)
T 1xjd_A          176 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH  219 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCC
Confidence            35689999999999998889999999999999999998877763

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=97.58  E-value=1e-05  Score=76.38  Aligned_cols=44  Identities=45%  Similarity=0.959  Sum_probs=39.6

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       168 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  211 (345)
T 3a8x_A          168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  211 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcC
Confidence            35689999999999998889999999999999999999877774

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=97.57  E-value=1e-05  Score=75.17  Aligned_cols=42  Identities=24%  Similarity=0.581  Sum_probs=36.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..+||+.|||||++.+..++.++|+||+||++|||+. +..+|
T Consensus       189 ~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf  231 (299)
T 4asz_A          189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW  231 (299)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             ceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            3469999999999999899999999999999999985 56666

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=97.56  E-value=5.9e-06  Score=78.39  Aligned_cols=44  Identities=52%  Similarity=1.072  Sum_probs=36.4

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       182 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~  225 (353)
T 3txo_A          182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE  225 (353)
T ss_dssp             ----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCC
Confidence            35689999999999988889999999999999999998876663

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.53  E-value=1.2e-05  Score=76.49  Aligned_cols=42  Identities=24%  Similarity=0.551  Sum_probs=37.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..+||+.|||||++.+..|+.++|+||+||++|||+. +..+|
T Consensus       246 ~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf  288 (353)
T 4ase_A          246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY  288 (353)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             cccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCC
Confidence            4579999999999999999999999999999999984 56666

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=97.50  E-value=1.1e-05  Score=78.36  Aligned_cols=44  Identities=55%  Similarity=1.142  Sum_probs=37.0

Q ss_pred             ccCcCCCCcccccccccCC----CCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~----~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..    ++.++|+||+||++|+|+.+.-+|.
T Consensus       227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  274 (410)
T 3v8s_A          227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  274 (410)
T ss_dssp             CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence            3568999999999998665    6788999999999999998877763

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=97.50  E-value=2e-05  Score=79.20  Aligned_cols=43  Identities=40%  Similarity=0.767  Sum_probs=39.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       348 ~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~  390 (543)
T 3c4z_A          348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR  390 (543)
T ss_dssp             CCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCC
Confidence            4589999999999998889999999999999999998877774

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=97.49  E-value=1.5e-05  Score=76.18  Aligned_cols=44  Identities=41%  Similarity=0.614  Sum_probs=36.9

Q ss_pred             ccCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+ ..++.++|+||+||++++|+.+.-+|.
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  232 (388)
T 3oz6_A          188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP  232 (388)
T ss_dssp             --CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence            45689999999999986 568899999999999999998876664

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=97.48  E-value=3e-05  Score=74.49  Aligned_cols=44  Identities=45%  Similarity=0.884  Sum_probs=37.3

Q ss_pred             ccCcCCCCccccccccc---CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~---~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++..   ..++.++|+||+||++|+|+.+..+|.
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  218 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH  218 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence            45689999999999874   357889999999999999998877774

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=97.48  E-value=1.6e-05  Score=74.18  Aligned_cols=43  Identities=21%  Similarity=0.503  Sum_probs=37.4

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...+||+.|||||++.+..++.++|+||+||++|||+. +..+|
T Consensus       205 ~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf  248 (308)
T 4gt4_A          205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY  248 (308)
T ss_dssp             SSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             cccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCC
Confidence            34579999999999999999999999999999999985 55555

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=97.48  E-value=1.7e-05  Score=75.49  Aligned_cols=43  Identities=42%  Similarity=0.788  Sum_probs=38.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~  219 (361)
T 2yab_A          177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  219 (361)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             cCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999988889999999999999999998877774

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.47  E-value=2.3e-05  Score=74.35  Aligned_cols=43  Identities=37%  Similarity=0.768  Sum_probs=38.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  231 (362)
T 2bdw_A          189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW  231 (362)
T ss_dssp             CSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            4579999999999988889999999999999999998876663

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=97.47  E-value=2e-05  Score=74.22  Aligned_cols=42  Identities=24%  Similarity=0.575  Sum_probs=36.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..+||+.|||||++.+..++.++|+||+||++|||+. +..+|
T Consensus       219 ~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf  261 (329)
T 4aoj_A          219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW  261 (329)
T ss_dssp             -CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             cccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCC
Confidence            4579999999999999899999999999999999985 55555

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=97.46  E-value=2e-05  Score=81.17  Aligned_cols=45  Identities=47%  Similarity=0.981  Sum_probs=39.0

Q ss_pred             cccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ....+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-+|.
T Consensus       499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~  543 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE  543 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCC
Confidence            345689999999999988889999999999999999998877763

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=97.43  E-value=1.7e-05  Score=75.09  Aligned_cols=42  Identities=48%  Similarity=1.016  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|
T Consensus       197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  238 (350)
T 1rdq_E          197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF  238 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCC
Confidence            457999999999999888999999999999999999876666

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.42  E-value=1.6e-05  Score=77.82  Aligned_cols=43  Identities=58%  Similarity=1.165  Sum_probs=36.6

Q ss_pred             cCcCCCCcccccccc-----cCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~-----~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.     ...++.++|+||+||++|+|+.+.-+|.
T Consensus       235 ~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~  282 (437)
T 4aw2_A          235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY  282 (437)
T ss_dssp             SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence            458999999999987     3467889999999999999998877763

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.40  E-value=2.6e-05  Score=76.37  Aligned_cols=43  Identities=40%  Similarity=0.824  Sum_probs=38.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       172 ~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~  214 (444)
T 3soa_A          172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW  214 (444)
T ss_dssp             CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence            4579999999999988889999999999999999998877763

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=97.39  E-value=1.8e-05  Score=76.76  Aligned_cols=42  Identities=50%  Similarity=1.136  Sum_probs=35.0

Q ss_pred             cCcCCCCccccccccc-------CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ-------TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-------~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++..       ..++.++|+||+||++|+|+.+.-+|
T Consensus       222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf  270 (412)
T 2vd5_A          222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF  270 (412)
T ss_dssp             SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCC
Confidence            4589999999999873       45788899999999999998877666

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=97.38  E-value=3.1e-05  Score=72.18  Aligned_cols=43  Identities=44%  Similarity=0.970  Sum_probs=38.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-+|.
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  222 (327)
T 3a62_A          180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT  222 (327)
T ss_dssp             TTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCC
Confidence            4579999999999988888999999999999999998776663

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.37  E-value=3.3e-05  Score=72.01  Aligned_cols=43  Identities=42%  Similarity=0.788  Sum_probs=38.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|.
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  218 (326)
T 2y0a_A          176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  218 (326)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             cccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCC
Confidence            4579999999999988889999999999999999998877763

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=97.34  E-value=3.3e-05  Score=75.31  Aligned_cols=44  Identities=50%  Similarity=1.023  Sum_probs=38.9

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++++|+.+.-+|.
T Consensus       307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  350 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY  350 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence            35689999999999988889999999999999999998776663

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.31  E-value=0.00013  Score=67.16  Aligned_cols=72  Identities=21%  Similarity=0.350  Sum_probs=54.1

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q psy17600         18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK------------------------------------   61 (351)
Q Consensus        18 lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~------------------------------------   61 (351)
                      -|+|||+++|..|.....  ..++.++...++.++...+..+|+                                    
T Consensus        91 ~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (304)
T 3sg8_A           91 SFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP  168 (304)
T ss_dssp             SCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred             ceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence            489999999988865332  235666666666677766666664                                    


Q ss_pred             ----------------------CCCeeccCCCCcEEecC--CCcEEEEecCccc
Q psy17600         62 ----------------------LGFIHRDIKPDNLLLDA--RGHIKLSDFGLCT   91 (351)
Q Consensus        62 ----------------------~~iihrDlkp~Nill~~--~~~~kl~DFGla~   91 (351)
                                            ..++|+|++|.||+++.  .+.+.++||+.+.
T Consensus       169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~  222 (304)
T 3sg8_A          169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA  222 (304)
T ss_dssp             HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred             cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence                                  23699999999999987  4567899999875

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.31  E-value=3e-05  Score=72.24  Aligned_cols=43  Identities=23%  Similarity=0.491  Sum_probs=35.5

Q ss_pred             ccCcCCCCcccccccccC---CCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQT---GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~---~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+||+.|||||++.+.   .++.++|+||+||++|||+.+..+|
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf  237 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY  237 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCC
Confidence            356899999999998743   4788999999999999999887776

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=97.29  E-value=3.8e-05  Score=71.51  Aligned_cols=43  Identities=35%  Similarity=0.689  Sum_probs=38.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|.
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  240 (355)
T 2eu9_A          198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ  240 (355)
T ss_dssp             SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence            4579999999999998889999999999999999998877664

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=97.27  E-value=1.8e-05  Score=74.59  Aligned_cols=44  Identities=41%  Similarity=0.770  Sum_probs=38.8

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       178 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  221 (342)
T 2qr7_A          178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA  221 (342)
T ss_dssp             CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCC
Confidence            35589999999999988778889999999999999998877774

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=97.27  E-value=3.2e-05  Score=78.27  Aligned_cols=43  Identities=42%  Similarity=0.871  Sum_probs=38.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       344 ~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~  386 (576)
T 2acx_A          344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ  386 (576)
T ss_dssp             CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSS
T ss_pred             ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence            4589999999999998889999999999999999998877774

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=97.26  E-value=3.5e-05  Score=72.59  Aligned_cols=43  Identities=44%  Similarity=0.882  Sum_probs=35.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  251 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY  251 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence            4579999999999998889999999999999999998877763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.25  E-value=4.3e-05  Score=71.05  Aligned_cols=43  Identities=40%  Similarity=0.736  Sum_probs=38.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+.+..++.
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~  242 (321)
T 2c30_A          200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF  242 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999988888999999999999999998776663

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=97.23  E-value=5.5e-05  Score=68.89  Aligned_cols=42  Identities=31%  Similarity=0.472  Sum_probs=35.6

Q ss_pred             cCcCCCCcccccccccCC-CCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~-~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+.. ++.++|+||+|+++++|+....++
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~  202 (292)
T 3o0g_A          160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred             CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC
Confidence            457899999999988765 788999999999999999766654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=97.22  E-value=5.6e-05  Score=73.40  Aligned_cols=43  Identities=40%  Similarity=0.495  Sum_probs=33.6

Q ss_pred             cccCcCCCCcccccccc-cCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        279 AYSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       279 ~~~~~Gt~~y~aPe~~~-~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ....+||+.|+|||++. ...++.++|+||+||++++|+....+
T Consensus       208 ~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  251 (432)
T 3n9x_A          208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS  251 (432)
T ss_dssp             ---CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred             ccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence            35668999999999864 45689999999999999999964333

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.20  E-value=6.4e-05  Score=71.63  Aligned_cols=43  Identities=40%  Similarity=0.652  Sum_probs=37.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+....+|.
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  289 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL  289 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence            4479999999999988888889999999999999998877764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=97.20  E-value=4.1e-05  Score=71.38  Aligned_cols=43  Identities=44%  Similarity=0.733  Sum_probs=24.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  210 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ  210 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence            4578999999999988889999999999999999998877764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=97.19  E-value=6.9e-05  Score=69.36  Aligned_cols=43  Identities=37%  Similarity=0.594  Sum_probs=36.8

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++|+|+.+..+|.
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  210 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP  210 (317)
T ss_dssp             CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            44789999999998764 57899999999999999998876663

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=97.16  E-value=4.4e-05  Score=71.44  Aligned_cols=43  Identities=42%  Similarity=0.802  Sum_probs=36.9

Q ss_pred             cCcCCCCcccccccccCCCC-CCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYG-PAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~-~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+. .++|+||+||++++|+.+.-+|.
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  215 (328)
T 3fe3_A          172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD  215 (328)
T ss_dssp             TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence            45799999999999887664 68999999999999998877764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=97.15  E-value=3.4e-05  Score=71.89  Aligned_cols=43  Identities=37%  Similarity=0.645  Sum_probs=37.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  204 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            3479999999999988878899999999999999998877663

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=97.15  E-value=7e-05  Score=68.14  Aligned_cols=43  Identities=33%  Similarity=0.566  Sum_probs=34.8

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+. .++.++|+||+|+++++|+.+..+|.
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  202 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP  202 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            34789999999998764 57899999999999999998776663

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=97.14  E-value=7.8e-05  Score=71.49  Aligned_cols=43  Identities=30%  Similarity=0.560  Sum_probs=36.9

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++|+|+.+.-+|.
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  243 (394)
T 4e7w_A          200 SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP  243 (394)
T ss_dssp             SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            45789999999998765 58899999999999999998876664

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=97.14  E-value=8e-05  Score=68.79  Aligned_cols=43  Identities=35%  Similarity=0.595  Sum_probs=36.7

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+.+..+|.
T Consensus       178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  221 (311)
T 3niz_A          178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP  221 (311)
T ss_dssp             CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence            3478999999999876 457899999999999999998876664

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=97.13  E-value=7.8e-05  Score=67.36  Aligned_cols=42  Identities=38%  Similarity=0.792  Sum_probs=37.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+.+..+|
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  207 (284)
T 3kk8_A          166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF  207 (284)
T ss_dssp             CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCC
Confidence            357999999999999888899999999999999999887766

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=97.13  E-value=7e-05  Score=71.35  Aligned_cols=43  Identities=28%  Similarity=0.482  Sum_probs=37.5

Q ss_pred             cCcCCCCccccccccc--CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~--~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+  ..++.++|+||+||++|+|+.+..+|.
T Consensus       194 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  238 (389)
T 3gni_B          194 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  238 (389)
T ss_dssp             TCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            3479999999999987  568999999999999999998877774

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.13  E-value=4.9e-05  Score=72.97  Aligned_cols=42  Identities=31%  Similarity=0.555  Sum_probs=37.6

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  251 (387)
T 1kob_A          210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA  251 (387)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCC
Confidence            469999999999988888999999999999999998877664

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=97.12  E-value=3.9e-05  Score=71.17  Aligned_cols=42  Identities=29%  Similarity=0.455  Sum_probs=31.2

Q ss_pred             cCcCCCCcccccccccC------CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT------GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~------~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+.      .++.++|+||+||++|||+....++
T Consensus       171 ~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             ---CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             cccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            45899999999998754      2456789999999999988665444

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=97.11  E-value=7.5e-05  Score=69.13  Aligned_cols=43  Identities=42%  Similarity=0.788  Sum_probs=37.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  219 (321)
T 2a2a_A          177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  219 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             ccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCC
Confidence            3469999999999988888999999999999999998877663

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.11  E-value=8.1e-05  Score=68.19  Aligned_cols=42  Identities=48%  Similarity=0.846  Sum_probs=37.2

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  208 (304)
T 2jam_A          167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY  208 (304)
T ss_dssp             HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            469999999999988888999999999999999998876663

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.09  E-value=8.7e-05  Score=69.50  Aligned_cols=43  Identities=37%  Similarity=0.621  Sum_probs=36.3

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+...-+|.
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  230 (351)
T 3mi9_A          187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ  230 (351)
T ss_dssp             SSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999876 457899999999999999998766553

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=97.09  E-value=7.2e-05  Score=69.55  Aligned_cols=42  Identities=36%  Similarity=0.763  Sum_probs=36.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+....+|
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  233 (327)
T 3lm5_A          192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF  233 (327)
T ss_dssp             --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            357999999999998888999999999999999999887666

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.08  E-value=7.6e-05  Score=69.51  Aligned_cols=42  Identities=40%  Similarity=0.813  Sum_probs=35.1

Q ss_pred             cCcCCCCccccccccc--CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~--~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+  ..++.++|+||+|+++++|+.+.-+|
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf  276 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF  276 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            4579999999999875  56788999999999999999887766

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=97.07  E-value=8.8e-05  Score=69.01  Aligned_cols=43  Identities=33%  Similarity=0.554  Sum_probs=34.0

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++++|+....+|.
T Consensus       196 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  239 (329)
T 3gbz_A          196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP  239 (329)
T ss_dssp             ----CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence            44789999999999874 47999999999999999998766663

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=97.04  E-value=0.00011  Score=69.43  Aligned_cols=44  Identities=14%  Similarity=0.277  Sum_probs=39.6

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+..++.
T Consensus       243 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  286 (365)
T 3e7e_A          243 TAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV  286 (365)
T ss_dssp             CCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred             eeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence            35679999999999998889999999999999999999887775

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=97.04  E-value=0.00012  Score=67.57  Aligned_cols=43  Identities=44%  Similarity=0.649  Sum_probs=37.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....+|.
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  220 (326)
T 1blx_A          178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  220 (326)
T ss_dssp             CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence            4579999999999988889999999999999999998766653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=97.04  E-value=0.00012  Score=66.32  Aligned_cols=43  Identities=33%  Similarity=0.600  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  213 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD  213 (284)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCC
Confidence            3479999999999998888999999999999999998776663

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=97.03  E-value=0.00011  Score=66.19  Aligned_cols=43  Identities=40%  Similarity=0.786  Sum_probs=19.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+....++.
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  213 (278)
T 3cok_A          171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD  213 (278)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHSSCSSC
T ss_pred             eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            3468999999999988888999999999999999998776664

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=97.00  E-value=0.00014  Score=68.64  Aligned_cols=43  Identities=44%  Similarity=0.889  Sum_probs=35.5

Q ss_pred             cCcCCCCcccccccccC--CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT--GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~--~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+.  .++.++|+||+||++|+|+....+|.
T Consensus       219 ~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~  263 (355)
T 1vzo_A          219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT  263 (355)
T ss_dssp             GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             CcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence            45799999999998853  46788999999999999998877764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=96.99  E-value=0.00012  Score=66.75  Aligned_cols=43  Identities=40%  Similarity=0.765  Sum_probs=35.2

Q ss_pred             cCcCCCCcccccccccCC---CCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~---~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..   ++.++|+||+|+++|+|+.+..+|.
T Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  241 (298)
T 2zv2_A          196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM  241 (298)
T ss_dssp             CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence            457999999999987654   3667899999999999998876663

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=96.99  E-value=0.00011  Score=69.42  Aligned_cols=44  Identities=41%  Similarity=0.668  Sum_probs=36.9

Q ss_pred             ccCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+. .++.++|+||+|+++++|+....+|.
T Consensus       189 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  233 (364)
T 3qyz_A          189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP  233 (364)
T ss_dssp             CCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCC
Confidence            345899999999987654 47889999999999999998876664

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.98  E-value=6.3e-05  Score=69.18  Aligned_cols=43  Identities=40%  Similarity=0.748  Sum_probs=35.9

Q ss_pred             cCcCCCCccccccccc-----CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-----TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-----~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++..     ..++.++|+||+|+++|+|+....+|.
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  227 (316)
T 2ac3_A          180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV  227 (316)
T ss_dssp             --CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCc
Confidence            4579999999999875     457889999999999999998877774

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.98  E-value=0.00016  Score=65.29  Aligned_cols=43  Identities=37%  Similarity=0.645  Sum_probs=36.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+.+..++.
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  208 (279)
T 3fdn_A          166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE  208 (279)
T ss_dssp             --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCC
Confidence            3479999999999988888999999999999999998766653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=96.98  E-value=0.0001  Score=69.35  Aligned_cols=43  Identities=35%  Similarity=0.578  Sum_probs=37.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+.+.-+|.
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  231 (360)
T 3eqc_A          189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP  231 (360)
T ss_dssp             --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred             CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999998888999999999999999998876663

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=96.97  E-value=6.8e-05  Score=71.00  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=36.9

Q ss_pred             CcCCCCccccccccc--CCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        282 TVGTPDYIAPEVFLQ--TGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~--~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ..||+.|+|||++.+  ..++.++|+||+||++|+|+.+.-+|..
T Consensus       251 ~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  295 (371)
T 3q60_A          251 SSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL  295 (371)
T ss_dssp             GGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred             ccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence            357799999999987  6789999999999999999988777653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=96.97  E-value=0.0001  Score=68.39  Aligned_cols=43  Identities=35%  Similarity=0.634  Sum_probs=34.2

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+.+..+|.
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  202 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP  202 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            3478999999999876 467889999999999999998876663

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=96.96  E-value=9e-05  Score=70.18  Aligned_cols=43  Identities=56%  Similarity=0.893  Sum_probs=33.1

Q ss_pred             cCcCCCCcccccccccCCCCCC-CcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPA-ADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~-~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+..+ +|+||+||++|+|+.+.-+|.
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  219 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE  219 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCC
Confidence            4579999999999988777555 899999999999998877764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.96  E-value=0.00018  Score=67.57  Aligned_cols=42  Identities=36%  Similarity=0.720  Sum_probs=37.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|
T Consensus       218 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  259 (360)
T 3llt_A          218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF  259 (360)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             CccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence            457999999999999888999999999999999999876666

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.94  E-value=0.00016  Score=68.51  Aligned_cols=43  Identities=28%  Similarity=0.559  Sum_probs=38.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       252 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  294 (397)
T 1wak_A          252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE  294 (397)
T ss_dssp             SCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence            4579999999999998889999999999999999998877664

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=96.93  E-value=0.00017  Score=66.20  Aligned_cols=43  Identities=40%  Similarity=0.710  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+.+..++.
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  226 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA  226 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence            4479999999999988888999999999999999998776663

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=96.93  E-value=0.00012  Score=65.94  Aligned_cols=43  Identities=42%  Similarity=0.788  Sum_probs=36.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....++.
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  212 (283)
T 3bhy_A          170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  212 (283)
T ss_dssp             --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence            3468999999999988888999999999999999998776663

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=96.93  E-value=0.00013  Score=68.25  Aligned_cols=42  Identities=33%  Similarity=0.594  Sum_probs=35.0

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+. .++.++|+||+|+++|+|+...-++
T Consensus       171 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~  213 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  213 (346)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence            45799999999998754 4788999999999999999765544

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.92  E-value=0.00013  Score=71.82  Aligned_cols=42  Identities=43%  Similarity=0.742  Sum_probs=36.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ .++.++|+||+||++|+|+.+.-+|.
T Consensus       182 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  223 (486)
T 3mwu_A          182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY  223 (486)
T ss_dssp             CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999875 58889999999999999998877763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=96.92  E-value=0.0002  Score=64.44  Aligned_cols=41  Identities=46%  Similarity=0.887  Sum_probs=34.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+. ++.++|+||+|+++++|+.+.-+|
T Consensus       167 ~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~  207 (277)
T 3f3z_A          167 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF  207 (277)
T ss_dssp             CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCC
Confidence            44799999999988654 888999999999999999876665

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=96.91  E-value=0.00025  Score=68.13  Aligned_cols=43  Identities=44%  Similarity=0.722  Sum_probs=34.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       222 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  264 (400)
T 1nxk_A          222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  264 (400)
T ss_dssp             -----CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999988889999999999999999998877774

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.91  E-value=0.00025  Score=64.30  Aligned_cols=42  Identities=29%  Similarity=0.665  Sum_probs=35.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+ .++.++|+||+|+++++|+....+|.
T Consensus       189 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~  230 (290)
T 1t4h_A          189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  230 (290)
T ss_dssp             ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCC
Confidence            3479999999998764 58889999999999999998766663

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.91  E-value=0.00015  Score=70.79  Aligned_cols=40  Identities=43%  Similarity=0.562  Sum_probs=26.3

Q ss_pred             ccccCcCCCCcccccccc-cCCCCCCCcccccchhhhhhhh
Q psy17600        278 LAYSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       278 ~~~~~~Gt~~y~aPe~~~-~~~~~~~~D~ws~G~i~~~l~~  317 (351)
                      .....+||+.|+|||++. ...++.++|+||+||++|+|+.
T Consensus       239 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          239 QLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             ------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             cccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            345668999999999864 4456777777777777777774

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=96.91  E-value=0.00016  Score=66.22  Aligned_cols=42  Identities=43%  Similarity=0.653  Sum_probs=36.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+...-+|
T Consensus       178 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf  219 (308)
T 3g33_A          178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF  219 (308)
T ss_dssp             GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSC
T ss_pred             CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCC
Confidence            457999999999998888999999999999999998766555

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.90  E-value=0.00016  Score=68.45  Aligned_cols=42  Identities=40%  Similarity=0.902  Sum_probs=34.6

Q ss_pred             cCcCCCCcccccccccC------CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT------GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~------~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+.      .++.++|+||+|+++|+|+.+..+|
T Consensus       258 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf  305 (365)
T 2y7j_A          258 ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF  305 (365)
T ss_dssp             CCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCC
Confidence            45799999999998642      4678899999999999999876666

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=96.90  E-value=0.00017  Score=66.08  Aligned_cols=42  Identities=43%  Similarity=0.867  Sum_probs=37.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  216 (297)
T 3fxz_A          175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (297)
T ss_dssp             CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            457999999999998888999999999999999999877666

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=96.89  E-value=0.0001  Score=66.15  Aligned_cols=43  Identities=33%  Similarity=0.640  Sum_probs=35.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+....++.
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  215 (271)
T 3dtc_A          173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR  215 (271)
T ss_dssp             ---CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTT
T ss_pred             CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            3468999999999988888999999999999999998766663

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=96.89  E-value=0.00022  Score=66.87  Aligned_cols=43  Identities=44%  Similarity=0.628  Sum_probs=36.3

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+.+..+|.
T Consensus       182 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~  225 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK  225 (353)
T ss_dssp             --CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSB
T ss_pred             ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            3478999999999876 568889999999999999998877764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.89  E-value=0.00013  Score=68.24  Aligned_cols=43  Identities=40%  Similarity=0.621  Sum_probs=36.5

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.. ..++.++|+||+|+++++|+.+.-+|.
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  224 (353)
T 2b9h_A          181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP  224 (353)
T ss_dssp             CCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             hccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCC
Confidence            4579999999998765 567889999999999999998776664

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.87  E-value=0.00021  Score=70.44  Aligned_cols=42  Identities=40%  Similarity=0.696  Sum_probs=36.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++. ..++.++|+||+||++|+|+.+.-+|.
T Consensus       197 ~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~  238 (494)
T 3lij_A          197 ERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFG  238 (494)
T ss_dssp             CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCC
Confidence            457999999999876 468999999999999999998876663

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=96.87  E-value=0.00022  Score=70.07  Aligned_cols=43  Identities=44%  Similarity=0.601  Sum_probs=36.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+.+.-+|.
T Consensus       222 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~  264 (464)
T 3ttj_A          222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP  264 (464)
T ss_dssp             ---CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4589999999999998889999999999999999998776663

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=96.87  E-value=0.00013  Score=70.56  Aligned_cols=43  Identities=47%  Similarity=0.853  Sum_probs=31.4

Q ss_pred             cCcCCCCccccccccc---CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~---~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+   ..++.++|+||+|+++|+|+.+..+|.
T Consensus       300 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~  345 (419)
T 3i6u_A          300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS  345 (419)
T ss_dssp             -----CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence            4579999999999864   456778999999999999998776664

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=96.87  E-value=0.0002  Score=68.02  Aligned_cols=43  Identities=37%  Similarity=0.587  Sum_probs=37.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+.+..+|.
T Consensus       217 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  259 (382)
T 2vx3_A          217 QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS  259 (382)
T ss_dssp             SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999998888999999999999999998766663

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=96.85  E-value=0.00016  Score=71.45  Aligned_cols=43  Identities=44%  Similarity=0.828  Sum_probs=36.4

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+ +.++|+||+||++|+|+.+.-+|.
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~  217 (476)
T 2y94_A          174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD  217 (476)
T ss_dssp             CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCC
Confidence            4579999999999987765 678999999999999998766663

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.85  E-value=0.00013  Score=71.71  Aligned_cols=42  Identities=43%  Similarity=0.697  Sum_probs=36.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ .++.++|+||+||++|+|+.+.-+|.
T Consensus       187 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  228 (484)
T 3nyv_A          187 DKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN  228 (484)
T ss_dssp             HHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCC
Confidence            3479999999999865 68999999999999999998877663

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.84  E-value=0.00022  Score=64.84  Aligned_cols=43  Identities=44%  Similarity=0.803  Sum_probs=37.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+.+..++.
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  216 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE  216 (294)
T ss_dssp             CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            3479999999999988888999999999999999998766653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=96.83  E-value=0.00018  Score=64.60  Aligned_cols=43  Identities=28%  Similarity=0.551  Sum_probs=36.3

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+ +.++|+||+|+++++|+.+.-++.
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  209 (276)
T 2yex_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD  209 (276)
T ss_dssp             CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCS
T ss_pred             CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999987664 668999999999999998776664

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=96.82  E-value=0.00022  Score=69.23  Aligned_cols=42  Identities=38%  Similarity=0.644  Sum_probs=37.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|
T Consensus       258 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf  299 (429)
T 3kvw_A          258 TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL  299 (429)
T ss_dssp             SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence            457999999999999888999999999999999999875555

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=96.80  E-value=0.00019  Score=66.15  Aligned_cols=42  Identities=36%  Similarity=0.647  Sum_probs=31.5

Q ss_pred             cCcCCCCcccccccc-----cCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~-----~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.     ...++.++|+||+|+++++|+.+..++
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  234 (326)
T 2x7f_A          188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL  234 (326)
T ss_dssp             ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCC
Confidence            447999999999987     445788899999999999998776655

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.79  E-value=0.0026  Score=58.65  Aligned_cols=29  Identities=31%  Similarity=0.623  Sum_probs=24.5

Q ss_pred             CCeeccCCCCcEEecC---CCcE-EEEecCccc
Q psy17600         63 GFIHRDIKPDNLLLDA---RGHI-KLSDFGLCT   91 (351)
Q Consensus        63 ~iihrDlkp~Nill~~---~~~~-kl~DFGla~   91 (351)
                      .++|+|++|.||+++.   ++.+ .|+||+.+.
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence            4699999999999987   4555 799999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=96.78  E-value=0.00018  Score=65.92  Aligned_cols=42  Identities=33%  Similarity=0.702  Sum_probs=32.4

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+.+..++
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  203 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLW  203 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            3478999999999876 56788999999999999999876665

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.78  E-value=0.00024  Score=70.24  Aligned_cols=42  Identities=45%  Similarity=0.699  Sum_probs=36.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++. ..++.++|+||+||++|+|+.+.-+|.
T Consensus       207 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  248 (504)
T 3q5i_A          207 DRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFG  248 (504)
T ss_dssp             CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence            457999999999876 468999999999999999998877663

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=96.76  E-value=0.00027  Score=66.42  Aligned_cols=42  Identities=40%  Similarity=0.766  Sum_probs=37.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+...-+|
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  233 (351)
T 3c0i_A          192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF  233 (351)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCC
Confidence            457999999999998888899999999999999999876666

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=96.75  E-value=0.00031  Score=66.52  Aligned_cols=43  Identities=44%  Similarity=0.620  Sum_probs=34.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+.+..+|.
T Consensus       185 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  227 (371)
T 2xrw_A          185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP  227 (371)
T ss_dssp             -----CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999998888999999999999999998776663

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=96.75  E-value=0.00018  Score=65.43  Aligned_cols=43  Identities=40%  Similarity=0.695  Sum_probs=34.9

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+ ..++.++|+||+|+++++|+.+..++.
T Consensus       185 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  228 (303)
T 2vwi_A          185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH  228 (303)
T ss_dssp             ---CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            4579999999999875 467889999999999999998776663

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=96.74  E-value=0.0003  Score=64.80  Aligned_cols=42  Identities=40%  Similarity=0.721  Sum_probs=36.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+.+..+|
T Consensus       193 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  234 (339)
T 1z57_A          193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF  234 (339)
T ss_dssp             SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            457999999999998888899999999999999999776665

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=96.74  E-value=0.00024  Score=65.95  Aligned_cols=44  Identities=20%  Similarity=0.220  Sum_probs=38.9

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-+|.
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~  218 (330)
T 2izr_A          175 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ  218 (330)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence            35689999999999998888999999999999999998877764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.73  E-value=0.00024  Score=67.49  Aligned_cols=41  Identities=27%  Similarity=0.579  Sum_probs=33.3

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+||++|+|+. +.-+|
T Consensus       265 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~  306 (370)
T 2psq_A          265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY  306 (370)
T ss_dssp             TTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence            357888999999888788888999999999999886 55444

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=96.72  E-value=0.00021  Score=64.81  Aligned_cols=37  Identities=43%  Similarity=0.736  Sum_probs=28.6

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhh
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~  317 (351)
                      ..+||+.|+|||++.+. .++.++|+||+|+++|+|+.
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             -----CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             cCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence            45799999999998764 57889999999999999985

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=96.71  E-value=0.00035  Score=64.47  Aligned_cols=42  Identities=33%  Similarity=0.648  Sum_probs=34.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++|+|+....+|
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf  239 (309)
T 3p86_A          198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW  239 (309)
T ss_dssp             ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred             cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            457999999999999888899999999999999999876665

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=96.69  E-value=0.00027  Score=64.06  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=38.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....+|..
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 3uzp_A          174 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            45799999999999988889999999999999999988777753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=96.68  E-value=0.00032  Score=65.86  Aligned_cols=43  Identities=30%  Similarity=0.650  Sum_probs=36.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-+|.
T Consensus       194 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  236 (373)
T 1q8y_A          194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE  236 (373)
T ss_dssp             SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            3478999999999988888999999999999999998766664

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=96.68  E-value=0.00031  Score=67.85  Aligned_cols=42  Identities=31%  Similarity=0.642  Sum_probs=35.9

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++|+|+.+.-+|
T Consensus       215 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf  257 (420)
T 1j1b_A          215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF  257 (420)
T ss_dssp             SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCC
Confidence            45799999999998764 6888999999999999999876666

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=96.66  E-value=0.00012  Score=68.46  Aligned_cols=43  Identities=44%  Similarity=0.717  Sum_probs=23.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (336)
T 3fhr_A          188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY  230 (336)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            4478999999999987778889999999999999998776663

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=96.66  E-value=0.00034  Score=64.29  Aligned_cols=39  Identities=36%  Similarity=0.659  Sum_probs=32.9

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA  318 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~  318 (351)
                      ...+||+.|+|||++.+..++.++|+||+|+++++|+.+
T Consensus       234 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~  272 (332)
T 3qd2_B          234 TGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS  272 (332)
T ss_dssp             CSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHc
Confidence            345799999999999888888899999999999999853

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=96.65  E-value=0.00025  Score=64.03  Aligned_cols=41  Identities=39%  Similarity=0.682  Sum_probs=32.3

Q ss_pred             CcCCCCccccccc----ccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVF----LQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~----~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++    .+..++.++|+||+|+++++|+...-++
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  213 (290)
T 3fme_A          169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY  213 (290)
T ss_dssp             -CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred             cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            3699999999996    3456778899999999999998776665

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.65  E-value=0.00031  Score=63.60  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=38.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+.+..+|..
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 4hgt_A          174 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence            45799999999999988889999999999999999988877743

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.65  E-value=0.00046  Score=65.38  Aligned_cols=43  Identities=42%  Similarity=0.614  Sum_probs=36.1

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+||++++|+.+.-+|.
T Consensus       184 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  227 (367)
T 1cm8_A          184 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK  227 (367)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence            4578999999999887 568889999999999999998766663

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=96.65  E-value=0.0003  Score=63.81  Aligned_cols=44  Identities=18%  Similarity=0.205  Sum_probs=38.4

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ....||+.|+|||++.+..++.++|+||+|+++++|+.+.-+|.
T Consensus       176 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  219 (298)
T 1csn_A          176 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  219 (298)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             cCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcc
Confidence            34579999999999988888999999999999999998877764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=96.64  E-value=0.00028  Score=66.85  Aligned_cols=42  Identities=21%  Similarity=0.554  Sum_probs=33.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+||++++|+. +.-+|
T Consensus       245 ~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf  287 (367)
T 3l9p_A          245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY  287 (367)
T ss_dssp             GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            3468899999999888788888888888888888885 44443

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=96.63  E-value=0.00056  Score=62.98  Aligned_cols=41  Identities=39%  Similarity=0.649  Sum_probs=34.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+ .++.++|+||+|+++++|+...+++
T Consensus       215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~  255 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELP  255 (311)
T ss_dssp             CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCC
Confidence            3469999999998875 6888999999999999998775544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=96.63  E-value=0.00031  Score=67.26  Aligned_cols=43  Identities=37%  Similarity=0.588  Sum_probs=34.6

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++|+|+.+..+|.
T Consensus       194 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  237 (405)
T 3rgf_A          194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  237 (405)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             CceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence            45799999999999874 47888999999999999998877774

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.62  E-value=0.00029  Score=65.36  Aligned_cols=41  Identities=24%  Similarity=0.463  Sum_probs=34.2

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||.+.+..++.++|+||+|+++++|+. +..++
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  220 (327)
T 3poz_A          179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  220 (327)
T ss_dssp             -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCc
Confidence            357889999999988888889999999999999986 55555

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=96.62  E-value=0.0002  Score=66.11  Aligned_cols=41  Identities=22%  Similarity=0.455  Sum_probs=33.7

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..|++.|+|||.+.+..++.++|+||+|+++++|+. ..-++
T Consensus       199 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~  240 (323)
T 3qup_A          199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY  240 (323)
T ss_dssp             --CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCc
Confidence            357888999999988888999999999999999987 54444

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=96.61  E-value=0.00033  Score=66.08  Aligned_cols=43  Identities=16%  Similarity=0.112  Sum_probs=38.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|.
T Consensus       220 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~  262 (364)
T 3op5_A          220 CHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE  262 (364)
T ss_dssp             CCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             ccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            4579999999999988888999999999999999998877774

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.59  E-value=0.0047  Score=55.25  Aligned_cols=28  Identities=32%  Similarity=0.402  Sum_probs=24.7

Q ss_pred             CeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         64 FIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        64 iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ++|+|+.+.||+++..+.+-|+||+.+.
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            6899999999999877767799999875

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=96.58  E-value=0.00048  Score=65.34  Aligned_cols=43  Identities=40%  Similarity=0.648  Sum_probs=34.5

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+||++++|+.+.-+|.
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  231 (367)
T 2fst_X          188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  231 (367)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            3579999999999886 567889999999999999998766663

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=96.57  E-value=0.00045  Score=63.07  Aligned_cols=42  Identities=31%  Similarity=0.622  Sum_probs=34.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||.+.+..++.++|+||+|+++|+|+.+..+|
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf  212 (294)
T 4eqm_A          171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF  212 (294)
T ss_dssp             ----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            457999999999999888899999999999999999877766

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=96.57  E-value=0.00047  Score=63.49  Aligned_cols=43  Identities=35%  Similarity=0.723  Sum_probs=33.6

Q ss_pred             cCcCCCCcccccccc--------cCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFL--------QTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~--------~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.        +..++.++|+||+|+++++|+.+..+|.
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  224 (319)
T 4euu_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR  224 (319)
T ss_dssp             CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEE
T ss_pred             ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            457999999999886        3566778888888888888887766663

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=96.56  E-value=0.0002  Score=66.33  Aligned_cols=42  Identities=36%  Similarity=0.627  Sum_probs=34.4

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..+ +.++|+||+|+++++|+.+..++
T Consensus       207 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf  249 (320)
T 3a99_A          207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF  249 (320)
T ss_dssp             CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCC
Confidence            3469999999999876655 56789999999999999876655

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=96.56  E-value=0.00035  Score=65.38  Aligned_cols=44  Identities=16%  Similarity=0.120  Sum_probs=38.0

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ....||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|.
T Consensus       218 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~  261 (345)
T 2v62_A          218 KGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE  261 (345)
T ss_dssp             GCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTG
T ss_pred             cccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            34579999999999988888999999999999999998766663

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=96.55  E-value=0.00019  Score=66.05  Aligned_cols=42  Identities=21%  Similarity=0.504  Sum_probs=35.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. ..-++
T Consensus       199 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~  241 (322)
T 1p4o_A          199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY  241 (322)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             CCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcc
Confidence            3467899999999988888899999999999999987 44444

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=96.55  E-value=0.00035  Score=63.08  Aligned_cols=40  Identities=30%  Similarity=0.543  Sum_probs=32.8

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .||+.|+|||++.+..++.++|+||+|+++++|+. +..+|
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf  218 (281)
T 1mp8_A          178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF  218 (281)
T ss_dssp             -CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCC
Confidence            57888999999988888889999999999999985 54444

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=96.53  E-value=0.00035  Score=63.60  Aligned_cols=43  Identities=42%  Similarity=0.665  Sum_probs=33.4

Q ss_pred             cCcCCCCcccccccc-----cCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~-----~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.     ...++.++|+||+|+++++|+....++.
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  223 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH  223 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCc
Confidence            457999999999984     4567888999999999999987766553

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=96.53  E-value=0.0005  Score=62.99  Aligned_cols=43  Identities=28%  Similarity=0.576  Sum_probs=36.7

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+||+.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~  222 (310)
T 3s95_A          180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD  222 (310)
T ss_dssp             CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSS
T ss_pred             cccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCC
Confidence            3568999999999999888899999999999999998654444

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=96.52  E-value=0.00038  Score=64.00  Aligned_cols=42  Identities=31%  Similarity=0.608  Sum_probs=34.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++|+|+.+..+|
T Consensus       178 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf  219 (311)
T 3ork_A          178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF  219 (311)
T ss_dssp             ----CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            457999999999998888888999999999999999876666

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=96.52  E-value=0.0005  Score=64.50  Aligned_cols=43  Identities=42%  Similarity=0.834  Sum_probs=36.7

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+ +.++|+||+|+++|+|+.+.-+|.
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  209 (336)
T 3h4j_B          166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD  209 (336)
T ss_dssp             CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSB
T ss_pred             cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCC
Confidence            4579999999999987765 678999999999999998877764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.51  E-value=0.00038  Score=64.71  Aligned_cols=41  Identities=24%  Similarity=0.463  Sum_probs=33.5

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||.+.+..++.++|+||+|+++|+|+. ...+|
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~  220 (327)
T 3lzb_A          179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  220 (327)
T ss_dssp             -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCC
Confidence            357888999999988888888999999999999886 55555

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=96.51  E-value=0.00033  Score=64.02  Aligned_cols=43  Identities=33%  Similarity=0.558  Sum_probs=35.7

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+ ..++.++|+||+|+++++|+.+..+|.
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~  226 (320)
T 2i6l_A          183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA  226 (320)
T ss_dssp             GGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCC
Confidence            3468999999998875 567889999999999999998766663

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=96.49  E-value=0.00039  Score=63.19  Aligned_cols=41  Identities=29%  Similarity=0.511  Sum_probs=32.6

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..|++.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~  217 (295)
T 3ugc_A          177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS  217 (295)
T ss_dssp             TTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             CCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccccc
Confidence            35777899999988888888888888888888888654443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=96.48  E-value=0.00039  Score=64.37  Aligned_cols=42  Identities=24%  Similarity=0.446  Sum_probs=33.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++|+|+. +..+|
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~  218 (325)
T 3kex_A          176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY  218 (325)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence            3468889999999988888889999999999999887 55555

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=96.48  E-value=0.00043  Score=63.85  Aligned_cols=43  Identities=33%  Similarity=0.607  Sum_probs=37.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+.+..++.
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~  242 (321)
T 2qkw_B          200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV  242 (321)
T ss_dssp             CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCS
T ss_pred             ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccc
Confidence            3468999999999988889999999999999999998877774

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=96.48  E-value=0.00026  Score=67.14  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=34.7

Q ss_pred             cCcCCCCcccccccccC-----------CCCCCCcccccchhhhhhhhcCccccc
Q psy17600        281 STVGTPDYIAPEVFLQT-----------GYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-----------~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ..+| +.|+|||++.+.           .++.++|+||+||++|+|+.+..+|..
T Consensus       262 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~  315 (377)
T 3byv_A          262 SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITK  315 (377)
T ss_dssp             CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcc
Confidence            4578 999999999877           688888999999999998887777643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.47  E-value=0.00037  Score=62.98  Aligned_cols=36  Identities=22%  Similarity=0.457  Sum_probs=29.5

Q ss_pred             cCCCCccccccccc-CCCCCCCcccccchhhhhhhhc
Q psy17600        283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIA  318 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~  318 (351)
                      .||+.|+|||++.+ ..++.++|+||+|+++++|+..
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  214 (289)
T 4fvq_A          178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG  214 (289)
T ss_dssp             HHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC
Confidence            57888999999876 5577788888888888888864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=96.46  E-value=0.00055  Score=62.87  Aligned_cols=42  Identities=31%  Similarity=0.631  Sum_probs=36.1

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~  204 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD  204 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTT
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCch
Confidence            359999999999988888999999999999999998776663

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.45  E-value=0.00091  Score=61.40  Aligned_cols=42  Identities=36%  Similarity=0.551  Sum_probs=31.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....+|
T Consensus       194 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  235 (309)
T 2h34_A          194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPY  235 (309)
T ss_dssp             ---CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCC
Confidence            346999999999998888889999999999999999776665

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=96.45  E-value=0.00043  Score=62.40  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=33.8

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~  215 (281)
T 3cc6_A          174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF  215 (281)
T ss_dssp             CCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCc
Confidence            357888999999987788888999999999999985 55555

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.45  E-value=0.00036  Score=62.60  Aligned_cols=42  Identities=45%  Similarity=0.884  Sum_probs=28.7

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..+ +.++|+||+|+++++|+....++
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  211 (276)
T 2h6d_A          169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF  211 (276)
T ss_dssp             --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            3468999999999887654 57899999999999999876665

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.45  E-value=0.00034  Score=63.49  Aligned_cols=42  Identities=40%  Similarity=0.614  Sum_probs=34.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++. ..++.++|+||+|+++++|+.+.-+|.
T Consensus       185 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~  226 (285)
T 3is5_A          185 NAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFT  226 (285)
T ss_dssp             --CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCC
Confidence            346999999999875 467889999999999999998766653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.44  E-value=0.00044  Score=63.22  Aligned_cols=42  Identities=24%  Similarity=0.551  Sum_probs=34.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~  251 (316)
T 2xir_A          209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY  251 (316)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCC
Confidence            3467889999999988888889999999999999985 55555

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=96.43  E-value=0.00046  Score=61.83  Aligned_cols=42  Identities=31%  Similarity=0.584  Sum_probs=32.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. ..-++
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~  208 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  208 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCC
Confidence            3457888999999887778888888888888888886 44333

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=96.43  E-value=0.00079  Score=65.39  Aligned_cols=42  Identities=26%  Similarity=0.468  Sum_probs=30.7

Q ss_pred             cCcCCCCccccccccc---CCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~---~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..+||+.|+|||++.+   ..++.++|+||+||++++|+. ..-++
T Consensus       185 ~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf  230 (432)
T 3p23_A          185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF  230 (432)
T ss_dssp             -CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTT
T ss_pred             ccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence            4579999999999873   345667888888888888886 44433

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=96.43  E-value=0.00063  Score=62.74  Aligned_cols=43  Identities=28%  Similarity=0.579  Sum_probs=35.8

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+....++.
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~  232 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  232 (330)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            4478999999999876 567888999999999999988777664

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=96.43  E-value=0.00043  Score=64.41  Aligned_cols=43  Identities=33%  Similarity=0.661  Sum_probs=35.7

Q ss_pred             cCcCCCCcccccccccC-CCCC-CCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGP-AADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~-~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+. .++. ++|+||+|+++++|+....++.
T Consensus       209 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  253 (348)
T 2pml_X          209 GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS  253 (348)
T ss_dssp             SSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence            45799999999999876 5555 8999999999999998766663

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=96.42  E-value=0.00065  Score=61.00  Aligned_cols=41  Identities=32%  Similarity=0.605  Sum_probs=34.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....+
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~  220 (284)
T 2a19_B          180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT  220 (284)
T ss_dssp             CCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSS
T ss_pred             ccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCc
Confidence            34699999999999888888899999999999999855433

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=96.42  E-value=0.00044  Score=64.62  Aligned_cols=42  Identities=24%  Similarity=0.551  Sum_probs=34.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++|+|+. +..++
T Consensus       254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  296 (359)
T 3vhe_A          254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY  296 (359)
T ss_dssp             -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCC
Confidence            4468999999999988888889999999999999985 65555

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=96.41  E-value=0.00045  Score=64.25  Aligned_cols=42  Identities=21%  Similarity=0.517  Sum_probs=34.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. +..+|
T Consensus       233 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  275 (344)
T 1rjb_A          233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  275 (344)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             CccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence            3457889999999988888889999999999999985 65555

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.41  E-value=0.00052  Score=64.30  Aligned_cols=43  Identities=21%  Similarity=0.245  Sum_probs=37.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++|+|+....+|.
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  269 (352)
T 2jii_A          227 PHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT  269 (352)
T ss_dssp             TTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             cccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            4579999999999988888889999999999999997766653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=96.40  E-value=0.00065  Score=65.88  Aligned_cols=37  Identities=27%  Similarity=0.517  Sum_probs=24.6

Q ss_pred             cCcCCCCccccccccc-------CCCCCCCcccccchhhhhhhh
Q psy17600        281 STVGTPDYIAPEVFLQ-------TGYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-------~~~~~~~D~ws~G~i~~~l~~  317 (351)
                      ..+||+.|+|||++.+       ..++.++|+||+||++++|+.
T Consensus       191 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt  234 (434)
T 2rio_A          191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS  234 (434)
T ss_dssp             ----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHh
Confidence            4579999999999875       345666677777777777665

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.40  E-value=0.00049  Score=62.84  Aligned_cols=42  Identities=21%  Similarity=0.510  Sum_probs=34.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       206 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  248 (313)
T 1t46_A          206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY  248 (313)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             CCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence            3457889999999988888888999999999999986 55554

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=96.39  E-value=0.00062  Score=64.64  Aligned_cols=42  Identities=31%  Similarity=0.690  Sum_probs=35.1

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++++|+.+..+|
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  242 (383)
T 3eb0_A          200 AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF  242 (383)
T ss_dssp             CCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence            45789999999998765 4788999999999999999876665

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=96.38  E-value=0.00068  Score=63.33  Aligned_cols=42  Identities=33%  Similarity=0.666  Sum_probs=34.8

Q ss_pred             cCcCCCCcccccccccCC-CCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~-~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+.. ++.++|+||+|+++|+|+.+..+|
T Consensus       190 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf  232 (360)
T 3e3p_A          190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF  232 (360)
T ss_dssp             STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCc
Confidence            457899999999987654 788899999999999999776665

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=96.35  E-value=0.00054  Score=61.05  Aligned_cols=42  Identities=31%  Similarity=0.584  Sum_probs=33.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...|++.|+|||++.+..++.++|+||+|+++++|+. ..-++
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  206 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  206 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCC
Confidence            3457888999999987778888999999999999886 44443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=96.35  E-value=0.00041  Score=64.46  Aligned_cols=40  Identities=30%  Similarity=0.564  Sum_probs=32.0

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .||+.|+|||++.+..++.++|+||+|+++++|+. +..+|
T Consensus       215 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~  255 (325)
T 3kul_A          215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY  255 (325)
T ss_dssp             -CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence            46788999999987778888899999999998886 54444

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.34  E-value=0.00056  Score=62.07  Aligned_cols=42  Identities=48%  Similarity=0.960  Sum_probs=34.1

Q ss_pred             cCcCCCCcccccccc------cCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFL------QTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~------~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.      ...++.++|+||+|+++++|+.+..++
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  229 (298)
T 1phk_A          182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF  229 (298)
T ss_dssp             CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCC
Confidence            347899999999885      335678899999999999999876665

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=96.34  E-value=0.00053  Score=65.53  Aligned_cols=42  Identities=38%  Similarity=0.710  Sum_probs=30.7

Q ss_pred             cCcCCCCcccccccccC-----------CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-----------GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-----------~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+.           .++.++|+||+||++|+|+.+..+|
T Consensus       215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf  267 (390)
T 2zmd_A          215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF  267 (390)
T ss_dssp             CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcc
Confidence            45799999999998752           4566677777777777777665555

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=96.34  E-value=0.00033  Score=63.59  Aligned_cols=38  Identities=34%  Similarity=0.649  Sum_probs=28.2

Q ss_pred             cCcCCCCcccccccccC------CCCCCCcccccchhhhhhhhc
Q psy17600        281 STVGTPDYIAPEVFLQT------GYGPAADWWSLGVIMYEMLIA  318 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~------~~~~~~D~ws~G~i~~~l~~~  318 (351)
                      ..+||+.|+|||++.+.      .++.++|+||+|+++|+|+..
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             CCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence            44799999999998765      233467777777777777755

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=96.34  E-value=0.00056  Score=65.06  Aligned_cols=37  Identities=22%  Similarity=0.495  Sum_probs=30.2

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA  318 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~  318 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++|+|+..
T Consensus       256 ~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~  292 (373)
T 3c1x_A          256 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR  292 (373)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence            3578889999998888888889999999999998863

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=96.33  E-value=0.00053  Score=63.42  Aligned_cols=42  Identities=21%  Similarity=0.521  Sum_probs=34.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       225 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  267 (333)
T 2i1m_A          225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY  267 (333)
T ss_dssp             SCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             CCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCC
Confidence            3457889999999988888889999999999999985 44444

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=96.33  E-value=0.0005  Score=62.64  Aligned_cols=43  Identities=28%  Similarity=0.507  Sum_probs=34.4

Q ss_pred             cCcCCCCcccccccccCC--CCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~--~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..  .+.++|+||+|+++++|+....++.
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  214 (305)
T 2wtk_C          170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE  214 (305)
T ss_dssp             CCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence            346999999999987543  3668999999999999998766653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=96.33  E-value=0.00062  Score=62.39  Aligned_cols=41  Identities=24%  Similarity=0.436  Sum_probs=32.7

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..|++.|+|||.+.+..++.++|+||+|+++++|+. ...++
T Consensus       209 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~  250 (313)
T 3brb_A          209 AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY  250 (313)
T ss_dssp             --CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCC
Confidence            357889999999988888888999999999999987 44444

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=96.32  E-value=0.00052  Score=61.35  Aligned_cols=41  Identities=29%  Similarity=0.570  Sum_probs=32.8

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. ..-++
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  206 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY  206 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCc
Confidence            356788999999988778888999999999999885 44444

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=96.32  E-value=0.00068  Score=61.21  Aligned_cols=42  Identities=29%  Similarity=0.544  Sum_probs=33.7

Q ss_pred             cCcCCCCcccccccc--cCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFL--QTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~--~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.  ...++.++|+||+|+++|+|+....+|
T Consensus       185 ~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  228 (287)
T 4f0f_A          185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF  228 (287)
T ss_dssp             CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence            357999999999984  344677889999999999998776666

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=96.31  E-value=0.00084  Score=61.78  Aligned_cols=43  Identities=30%  Similarity=0.550  Sum_probs=22.2

Q ss_pred             cCcCCCCccccccc---ccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVF---LQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~---~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++   .+..++.++|+||+|+++++|+....+|.
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  254 (337)
T 3ll6_A          209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE  254 (337)
T ss_dssp             ---------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             cccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence            45699999999998   44556778999999999999987766664

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=96.31  E-value=0.00049  Score=64.28  Aligned_cols=42  Identities=40%  Similarity=0.742  Sum_probs=28.7

Q ss_pred             cCcCCCCccccccccc-----------CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ-----------TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-----------~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+           ..++.++|+||+|+++++|+.+..+|
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf  220 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF  220 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcc
Confidence            4579999999999865           34556677777777777777655554

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=96.30  E-value=0.00075  Score=63.44  Aligned_cols=42  Identities=40%  Similarity=0.655  Sum_probs=33.9

Q ss_pred             cCcCCCCcccccccc---cCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~---~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.   ...++.++|+||+|+++++|+....++
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~  253 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  253 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            357999999999985   345778889999999999988776555

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=96.30  E-value=0.00067  Score=63.36  Aligned_cols=43  Identities=40%  Similarity=0.832  Sum_probs=36.6

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+ +.++|+||+|+++|+|+....+|.
T Consensus       188 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  231 (335)
T 3dls_A          188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC  231 (335)
T ss_dssp             EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred             ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchh
Confidence            3579999999999987766 678899999999999998877764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=96.29  E-value=0.00067  Score=61.12  Aligned_cols=41  Identities=22%  Similarity=0.544  Sum_probs=32.2

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. ..-++
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~  222 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY  222 (283)
T ss_dssp             TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            357888999999887778888888888888888874 54444

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=96.29  E-value=0.00061  Score=63.13  Aligned_cols=42  Identities=19%  Similarity=0.528  Sum_probs=33.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++|+|+. +..++
T Consensus       235 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          235 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             -CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            3468899999999888788888999999999999985 54444

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=96.27  E-value=0.00054  Score=63.63  Aligned_cols=43  Identities=28%  Similarity=0.551  Sum_probs=36.3

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..+ +.++|+||+|+++|+|+.+..+|.
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  209 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD  209 (323)
T ss_dssp             SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred             CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence            4579999999999987665 668999999999999998777764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=96.27  E-value=0.00063  Score=62.88  Aligned_cols=42  Identities=21%  Similarity=0.554  Sum_probs=33.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       204 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  246 (327)
T 2yfx_A          204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY  246 (327)
T ss_dssp             GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            3468999999999988788888999999999999885 44443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=96.27  E-value=0.00073  Score=61.20  Aligned_cols=42  Identities=21%  Similarity=0.347  Sum_probs=34.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+....++
T Consensus       187 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~  228 (298)
T 3pls_A          187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP  228 (298)
T ss_dssp             CTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred             CCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence            346788999999998888888899999999999998754444

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=96.26  E-value=0.00048  Score=62.96  Aligned_cols=41  Identities=22%  Similarity=0.477  Sum_probs=33.6

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. +.-++
T Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  253 (314)
T 2ivs_A          212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY  253 (314)
T ss_dssp             CCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence            457889999999988778888999999999999886 54444

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=96.26  E-value=0.00063  Score=61.10  Aligned_cols=41  Identities=39%  Similarity=0.756  Sum_probs=34.5

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  216 (279)
T 2w5a_A          176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF  216 (279)
T ss_dssp             HHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            46899999999998878888899999999999998775555

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=96.26  E-value=0.0007  Score=64.30  Aligned_cols=41  Identities=24%  Similarity=0.557  Sum_probs=31.8

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. ...++
T Consensus       253 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~  294 (382)
T 3tt0_A          253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY  294 (382)
T ss_dssp             CCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence            357788999998887777888888888888888886 44444

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=96.26  E-value=0.00048  Score=63.53  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=36.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+.+..+|.
T Consensus       194 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          194 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            3469999999999988788889999999999999998777663

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=96.26  E-value=0.001  Score=62.98  Aligned_cols=42  Identities=45%  Similarity=0.659  Sum_probs=35.6

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+.+..+|
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf  242 (371)
T 4exu_A          200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF  242 (371)
T ss_dssp             CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence            4578999999999886 56788899999999999999876666

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.26  E-value=0.00033  Score=64.88  Aligned_cols=43  Identities=33%  Similarity=0.522  Sum_probs=31.1

Q ss_pred             cCcCCCCccccccccc-------CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-------TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-------~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+       ..++.++|+||+|+++|+|+..-.++.
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~  236 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF  236 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence            4579999999999876       234456777777777777776644443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=96.24  E-value=0.00065  Score=61.09  Aligned_cols=40  Identities=20%  Similarity=0.517  Sum_probs=32.9

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .+++.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~  215 (278)
T 1byg_A          175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  215 (278)
T ss_dssp             -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCC
Confidence            57889999999988788888999999999999985 55554

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=96.21  E-value=0.00071  Score=61.05  Aligned_cols=41  Identities=20%  Similarity=0.447  Sum_probs=33.4

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||.+.+..++.++|+||+|+++++|+. ...++
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~  213 (288)
T 3kfa_A          172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY  213 (288)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            357888999999988888888999999999999886 44444

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.21  E-value=0.00078  Score=62.68  Aligned_cols=40  Identities=25%  Similarity=0.541  Sum_probs=32.4

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       211 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf  251 (333)
T 1mqb_A          211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY  251 (333)
T ss_dssp             CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCc
Confidence            46788999999887778888899999999999885 54444

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=96.21  E-value=0.00048  Score=65.42  Aligned_cols=39  Identities=23%  Similarity=0.556  Sum_probs=29.7

Q ss_pred             CCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       284 Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      +++.|+|||++....++.++|+||+|+++++|+. +..++
T Consensus       277 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~  316 (377)
T 3cbl_A          277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY  316 (377)
T ss_dssp             EEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            5667999998877777778888888888888875 44444

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.20  E-value=0.0012  Score=61.00  Aligned_cols=39  Identities=33%  Similarity=0.534  Sum_probs=30.6

Q ss_pred             cCcCCCCcccccccccCCCCCC------CcccccchhhhhhhhcC
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPA------ADWWSLGVIMYEMLIAP  319 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~------~D~ws~G~i~~~l~~~~  319 (351)
                      ..+||+.|+|||++.+......      +|+||+|+++|+|+...
T Consensus       205 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~  249 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRC  249 (337)
T ss_dssp             SSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             CCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhcc
Confidence            4579999999999987665555      78888888888887653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.19  E-value=0.00074  Score=61.31  Aligned_cols=41  Identities=20%  Similarity=0.423  Sum_probs=33.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++++|+....+
T Consensus       191 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~  231 (298)
T 3f66_A          191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP  231 (298)
T ss_dssp             -CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            34688899999999888888899999999999999874443

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=96.19  E-value=0.0011  Score=61.06  Aligned_cols=41  Identities=34%  Similarity=0.699  Sum_probs=19.3

Q ss_pred             CcCCCCccccccc----ccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVF----LQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~----~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++    .+..++.++|+||+|+++++|+.+..++
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  229 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY  229 (327)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHHSCCCS
T ss_pred             CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            3689999999998    3455777888888888888888766655

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.18  E-value=0.00055  Score=61.97  Aligned_cols=41  Identities=27%  Similarity=0.450  Sum_probs=34.2

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. +..+|
T Consensus       173 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  214 (287)
T 1u59_A          173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY  214 (287)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence            357899999999987778888999999999999985 65555

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.18  E-value=0.001  Score=60.59  Aligned_cols=42  Identities=40%  Similarity=0.665  Sum_probs=36.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  219 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH  219 (303)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCC
Confidence            457999999999998888888999999999999998775555

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=96.17  E-value=0.0008  Score=59.86  Aligned_cols=41  Identities=27%  Similarity=0.595  Sum_probs=32.7

Q ss_pred             CcCCCCcccccccccCCCCC---CCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGP---AADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~---~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++.+..++.   ++|+||+|+++++|+.+..+|
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~  211 (271)
T 3kmu_A          168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF  211 (271)
T ss_dssp             CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTT
T ss_pred             ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            46899999999988765544   689999999999988766555

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=96.17  E-value=0.00057  Score=65.88  Aligned_cols=43  Identities=28%  Similarity=0.332  Sum_probs=32.6

Q ss_pred             ccCcCCCCccccccc----------ccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVF----------LQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~----------~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+| +.|+|||++          ....++.++|+||+||++|+|+....+|.
T Consensus       266 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~  318 (413)
T 3dzo_A          266 VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT  318 (413)
T ss_dssp             CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred             ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            34578 999999998          33446668888888888888887766663

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=96.17  E-value=0.00078  Score=65.68  Aligned_cols=40  Identities=20%  Similarity=0.403  Sum_probs=27.4

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .+++.|+|||++....++.++|+||+|+++++|+. +..+|
T Consensus       346 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~  386 (454)
T 1qcf_A          346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY  386 (454)
T ss_dssp             SSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCC
Confidence            45667777777776667777777777777777775 44444

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.16  E-value=0.00051  Score=62.47  Aligned_cols=38  Identities=32%  Similarity=0.497  Sum_probs=31.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA  318 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~  318 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+..
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  225 (302)
T 4e5w_A          188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY  225 (302)
T ss_dssp             CTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHc
Confidence            34688889999998877777888888888888888854

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=96.16  E-value=0.0011  Score=62.16  Aligned_cols=42  Identities=36%  Similarity=0.593  Sum_probs=32.5

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+ ..++.++|+||+|+++++|+.+..+|
T Consensus       192 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf  234 (362)
T 3pg1_A          192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF  234 (362)
T ss_dssp             ----CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             eecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCC
Confidence            3478999999999876 56788899999999999998776666

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.15  E-value=0.0011  Score=61.50  Aligned_cols=42  Identities=36%  Similarity=0.710  Sum_probs=34.3

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+. .++.++|+||+|+++++|+.+..+|
T Consensus       183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  225 (331)
T 4aaa_A          183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF  225 (331)
T ss_dssp             -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCC
Confidence            34789999999998765 5788899999999999998776555

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=96.14  E-value=0.00079  Score=63.92  Aligned_cols=40  Identities=20%  Similarity=0.498  Sum_probs=29.7

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .+++.|+|||++.+..++.++|+||+|+++++|+. +..+|
T Consensus       211 ~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~  251 (373)
T 2qol_A          211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY  251 (373)
T ss_dssp             ---CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTT
T ss_pred             CcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCC
Confidence            46778999999888788888899999999888875 54444

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=96.13  E-value=0.00042  Score=64.17  Aligned_cols=43  Identities=26%  Similarity=0.391  Sum_probs=32.8

Q ss_pred             cCcCCCCcccccccccC-----CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-----GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-----~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+.     .++.++|+||+|+++|+|+....+|.
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~  239 (322)
T 3soc_A          192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD  239 (322)
T ss_dssp             TCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSS
T ss_pred             cCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCC
Confidence            35799999999998763     34456788888888888887766653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.12  E-value=0.00062  Score=63.20  Aligned_cols=41  Identities=27%  Similarity=0.579  Sum_probs=33.0

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. +..++
T Consensus       219 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  260 (334)
T 2pvf_A          219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY  260 (334)
T ss_dssp             CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCc
Confidence            357888999999887778888899999999999886 54444

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=96.11  E-value=0.00062  Score=62.95  Aligned_cols=40  Identities=23%  Similarity=0.419  Sum_probs=32.3

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .+++.|+|||++.+..++.++|+||+|+++++|+. +.-++
T Consensus       202 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf  242 (327)
T 1fvr_A          202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  242 (327)
T ss_dssp             -CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCC
Confidence            57889999999887777888999999999999885 55444

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=96.10  E-value=0.0015  Score=59.79  Aligned_cols=41  Identities=32%  Similarity=0.596  Sum_probs=31.7

Q ss_pred             CcCCCCcccccccccCC---CCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~---~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++.+..   ++.++|+||+|+++++|+....++
T Consensus       203 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~  246 (317)
T 2buj_A          203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY  246 (317)
T ss_dssp             HHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCCh
Confidence            36899999999987543   577888888888888888665554

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=96.08  E-value=0.00064  Score=61.10  Aligned_cols=41  Identities=20%  Similarity=0.379  Sum_probs=33.0

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..|++.|+|||++.+..++.++|+||+|+++++|+. +.-++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~  211 (279)
T 1qpc_A          170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY  211 (279)
T ss_dssp             CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence            357889999999887777888899999999999886 44444

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.08  E-value=0.00096  Score=65.01  Aligned_cols=40  Identities=20%  Similarity=0.517  Sum_probs=31.5

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .+++.|+|||++.+..++.++|+||+|+++++|+. +..+|
T Consensus       347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~  387 (450)
T 1k9a_A          347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  387 (450)
T ss_dssp             CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            56778899998887778888888888888888885 55555

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.08  E-value=0.0008  Score=60.30  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=30.3

Q ss_pred             CcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcC
Q psy17600        282 TVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAP  319 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~  319 (351)
                      ..||+.|+|||++.+. .++.++|+||+|+++++|+...
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~  228 (289)
T 1x8b_A          190 EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE  228 (289)
T ss_dssp             CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred             cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence            3589999999998765 4556889999999999887543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=96.07  E-value=0.0011  Score=61.69  Aligned_cols=42  Identities=45%  Similarity=0.844  Sum_probs=36.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+|+++++|+....+|
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  241 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF  241 (335)
T ss_dssp             CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCC
Confidence            357999999999998888888999999999999999876665

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=96.06  E-value=0.00061  Score=61.82  Aligned_cols=40  Identities=25%  Similarity=0.497  Sum_probs=32.7

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .|++.|+|||.+.+..++.++|+||+|+++++|+. +..++
T Consensus       181 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  221 (291)
T 1xbb_A          181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY  221 (291)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             CCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCC
Confidence            46788999999887777888899999999999886 55554

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=96.04  E-value=0.001  Score=60.23  Aligned_cols=42  Identities=24%  Similarity=0.543  Sum_probs=31.3

Q ss_pred             cCcCCCCcccccccc---cCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~---~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.   +..++.++|+||+|+++++|+....+|
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~  225 (289)
T 3og7_A          181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY  225 (289)
T ss_dssp             ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCc
Confidence            346999999999986   445666888888888888888766555

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=96.03  E-value=0.00056  Score=61.95  Aligned_cols=40  Identities=45%  Similarity=0.775  Sum_probs=33.8

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++.+ .++.++|+||+|+++++|+.+..++
T Consensus       183 ~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~  222 (287)
T 2wei_A          183 RIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF  222 (287)
T ss_dssp             HHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCC
Confidence            358899999998865 4788999999999999999876665

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.02  E-value=0.0011  Score=65.46  Aligned_cols=44  Identities=20%  Similarity=0.223  Sum_probs=39.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ  324 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~~  324 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|..
T Consensus       172 ~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~  215 (483)
T 3sv0_A          172 NLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG  215 (483)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            45799999999999988899999999999999999988777743

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=96.01  E-value=0.00066  Score=61.28  Aligned_cols=41  Identities=27%  Similarity=0.490  Sum_probs=32.1

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++++|+. ...++
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  225 (291)
T 1u46_A          184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW  225 (291)
T ss_dssp             --CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            457888999999887777888899999999999886 54444

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=95.98  E-value=0.0011  Score=64.68  Aligned_cols=40  Identities=23%  Similarity=0.399  Sum_probs=28.0

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .|++.|+|||++....++.++|+||+|+++++|+. +..++
T Consensus       342 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~  382 (452)
T 1fmk_A          342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY  382 (452)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             cccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCC
Confidence            45677888887777677777788888888887775 43333

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=95.97  E-value=0.0011  Score=67.50  Aligned_cols=30  Identities=37%  Similarity=0.602  Sum_probs=18.5

Q ss_pred             hhcCcccccCCCCCcccchhhhHHHHHHhh
Q psy17600        316 LIAPEVFLQTGYGPAADWWSLGVIMYEMLI  345 (351)
Q Consensus       316 ~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~  345 (351)
                      ++|||++....|+.++|||||||++|||+.
T Consensus       505 y~APE~~~~~~~~~~sDvwSlGv~l~ellt  534 (613)
T 2ozo_A          505 WYAPECINFRKFSSRSDVWSYGVTMWEALS  534 (613)
T ss_dssp             TSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eeCHhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence            456666655556666666666666666664

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=95.93  E-value=0.0014  Score=60.27  Aligned_cols=42  Identities=48%  Similarity=0.860  Sum_probs=33.8

Q ss_pred             CcCCCCcccccccc---cCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        282 TVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~---~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+||+.|+|||++.   ...++.++|+||+|+++|+|+....+|.
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  220 (322)
T 2ycf_A          176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS  220 (322)
T ss_dssp             HHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            46999999999974   3456778899999999999987766663

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=95.93  E-value=0.00077  Score=62.18  Aligned_cols=42  Identities=29%  Similarity=0.422  Sum_probs=33.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       196 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~  237 (318)
T 3lxp_A          196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS  237 (318)
T ss_dssp             -CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             CCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcc
Confidence            345888899999998877788889999999999988654444

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=95.91  E-value=0.0008  Score=62.19  Aligned_cols=42  Identities=24%  Similarity=0.433  Sum_probs=34.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~  230 (327)
T 3lxl_A          189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS  230 (327)
T ss_dssp             CCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             cCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCC
Confidence            346888999999998877788889999999999988765544

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=95.90  E-value=0.0013  Score=60.11  Aligned_cols=42  Identities=45%  Similarity=0.833  Sum_probs=34.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...|++.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       195 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  236 (310)
T 2wqm_A          195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  236 (310)
T ss_dssp             ----CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            346899999999998888888999999999999999876665

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=95.90  E-value=0.00079  Score=62.25  Aligned_cols=41  Identities=29%  Similarity=0.511  Sum_probs=33.1

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..|++.|+|||++.+..++.++|+||+|+++++|+....++
T Consensus       208 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~  248 (326)
T 2w1i_A          208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS  248 (326)
T ss_dssp             CSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGG
T ss_pred             CCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence            35778899999988777788899999999999988764443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=95.90  E-value=0.0012  Score=67.32  Aligned_cols=30  Identities=33%  Similarity=0.633  Sum_probs=25.5

Q ss_pred             hhcCcccccCCCCCcccchhhhHHHHHHhh
Q psy17600        316 LIAPEVFLQTGYGPAADWWSLGVIMYEMLI  345 (351)
Q Consensus       316 ~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~  345 (351)
                      ++|||++.+..|+.++|||||||++|||+.
T Consensus       538 y~APE~~~~~~~~~~sDvwSlGv~l~ellt  567 (635)
T 4fl3_A          538 WYAPECINYYKFSSKSDVWSFGVLMWEAFS  567 (635)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eeChhhhcCCCCCcHHHHHHHHHHHHHHHh
Confidence            678888888788888888888888888886

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=95.89  E-value=0.0014  Score=60.14  Aligned_cols=42  Identities=40%  Similarity=0.742  Sum_probs=28.5

Q ss_pred             cCcCCCCccccccccc-----------CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQ-----------TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-----------~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+           ..++.++|+||+|+++++|+.+..++
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf  239 (313)
T 3cek_A          187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF  239 (313)
T ss_dssp             ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCch
Confidence            3469999999999875           24555677777777777777665554

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=95.87  E-value=0.00096  Score=65.90  Aligned_cols=40  Identities=20%  Similarity=0.453  Sum_probs=27.0

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      .+++.|+|||++....++.++|+||+|+++++|+. +..++
T Consensus       380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~  420 (495)
T 1opk_A          380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY  420 (495)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCC
Confidence            45667777777776666777777777777777775 43333

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=95.82  E-value=0.0016  Score=59.44  Aligned_cols=41  Identities=32%  Similarity=0.584  Sum_probs=28.4

Q ss_pred             CcCCCCcccccccc-----cCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~-----~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..||+.|+|||++.     ...++.++|+||+|+++++|+....+|
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  229 (318)
T 2dyl_A          184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY  229 (318)
T ss_dssp             ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCC
Confidence            46899999999984     345677788888888888888765554

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=95.78  E-value=0.0014  Score=65.38  Aligned_cols=35  Identities=26%  Similarity=0.446  Sum_probs=22.4

Q ss_pred             cCCCCcccccccccCCCCCCCcccccchhhhhhhh
Q psy17600        283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       283 ~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~  317 (351)
                      .++..|+|||++....++.++|+||+|+++++|+.
T Consensus       425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t  459 (535)
T 2h8h_A          425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT  459 (535)
T ss_dssp             TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred             cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence            35556777776665556666666666666666664

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=95.74  E-value=0.0013  Score=59.44  Aligned_cols=43  Identities=42%  Similarity=0.699  Sum_probs=34.7

Q ss_pred             cCcCCCCcccccccccCC--CCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~--~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...||+.|+|||++.+..  ++.++|+||+|+++++|+.+..+|.
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  226 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY  226 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTG
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence            346899999999987643  6778999999999999987766653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	351
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-34
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-33
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.002
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-33
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.001
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-33
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-30
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-09
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-29
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-28
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-05
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-26
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-24
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-24
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.001
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-23
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-23
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-22
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-22
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-21
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-20
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-07
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-07
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-06
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-19
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	0.002
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-19
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-17
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-05
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.001
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-16
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-16
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-16
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-15
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.003
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.003
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.002
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-06
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	0.002
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-13
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-12
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.001
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.004
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.003

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  126 bits (317), Expect = 3e-34
 Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 34/245 (13%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +++IM+++ GG++ +LL K         +FY AE  LA++ +H    I+RD+KP+N
Sbjct: 75  DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN 134

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDFS--------- 114
           +LLD  GHIK++DFG    +     T          +        K  D+          
Sbjct: 135 ILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 194

Query: 115 ---YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSAR-G 169
              Y PF   N  +TY K+++    L FPP    +E+ ++ + R    +  +RLG+ + G
Sbjct: 195 LAGYTPFYDSNTMKTYEKILNAE--LRFPPF--FNEDVKDLLSRLITRDLSQRLGNLQNG 250

Query: 170 VEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
            E++K+     +F+ V W+ +  R       P   +   DTS FD +P+  +        
Sbjct: 251 TEDVKN---HPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGED 307

Query: 227 QDGEI 231
              ++
Sbjct: 308 PYADL 312

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.9 bits (116), Expect = 4e-07
 Identities = 23/52 (44%), Positives = 30/52 (57%)

Query: 265 KRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           K     + K    + Y+  GTPDYIAPEV     Y  + DWWS G+++YEML
Sbjct: 144 KITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           IAPEV     Y  + DWWS G+++YEML
Sbjct: 168 IAPEVVSTKPYNKSIDWWSFGILIYEML 195

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  123 bits (310), Expect = 5e-33
 Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 33/236 (13%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
             D  NLY++ME++ GG+M + L +    SE   +FY A+  L  + +H L  I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDF----------YRDLSQAKPSDFS------- 114
           +NLL+D +G+I+++DFG    +K    T                   K  D+        
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229

Query: 115 -----YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSAR 168
                YPPF ++ P + Y K++S +  + FP     S + ++ +         +R G+ +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 285

Query: 169 -GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIP 221
            GV ++K+    ++F   DW  I +R    P   + K   DTSNFDD+ + ++ + 
Sbjct: 286 NGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVS 338

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           ++  GTP+ +APE+ L  GY  A DWW+LGV++YEM 
Sbjct: 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (86), Expect = 0.002
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 297 TGYGPAADWWSLGVIMYEML--IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           T +G A         +      +APE+ L  GY  A DWW+LGV++YEM 
Sbjct: 183 TDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  123 bits (309), Expect = 9e-33
 Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 35/286 (12%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
            P  L  I++ + GGD+   L +    SE   +FY AE  L ++ +H    ++RD+KP N
Sbjct: 78  TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN 137

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQA------------KPSDF-------- 113
           +LLD  GH+++SD GL     K                           +D+        
Sbjct: 138 ILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 197

Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA- 167
                + PF     ++ +          V  P+   S E R  +      + +RRLG   
Sbjct: 198 KLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD-SFSPELRSLLEGLLQRDVNRRLGCLG 256

Query: 168 RGVEELKSLGACQFFRGVDWDHIRER---PAAIPVQVKSIDDTSNFDDFPDVKLEIPSAP 224
           RG +E+K      FFR +DW  +  +   P  IP     ++    FD     + +     
Sbjct: 257 RGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIP-PRGEVNAADAFDIGSFDEEDTKGIK 312

Query: 225 LPQDGEIIYKDWVF-INYTFKRFEANSPFEFSLSSTNPMDSKRRAE 269
           L    + +Y+++   I+  +++  A + F+   + T+ ++++++ +
Sbjct: 313 LLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTK 358

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.1 bits (106), Expect = 6e-06
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 271 WKKNRRALAYSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEVF 322
                +   +++VGT  Y+APEV      Y  +ADW+SLG +++++L     F
Sbjct: 154 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 206

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 295 LQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           L   +       S+G   Y       +     Y  +ADW+SLG +++++L
Sbjct: 153 LACDFSKKKPHASVGTHGYMA--PEVLQKGVAYDSSADWFSLGCMLFKLL 200

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 9e-33
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 42/267 (15%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
                 L  +ME+  GG++   L ++   +EE  +FY AE   A++ +H    ++RDIK 
Sbjct: 74  FQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAKPSDF----- 113
           +NL+LD  GHIK++DFGLC        T             +   D    +  D+     
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193

Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                     PF +++ +  +  ++   + + FP    +S EA+  +      +  +RLG
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLG 249

Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIPS 222
                 +E+      +FF  ++W  + ++    P   QV S  DT  FDD    +    +
Sbjct: 250 GGPSDAKEVME---HRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITIT 306

Query: 223 APLPQDGEII------YKDWVFINYTF 243
            P   D   +       +  +F ++ +
Sbjct: 307 PPDRYDSLGLLELDQREEQEMFEDFDY 333

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 3e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +  A   +  GTP+Y+APEV     YG A DWW LGV+MYEM+
Sbjct: 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 2e-30
 Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 41/259 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
              NL+ +ME+L GGD+M  +            FY AE  L +  +H  G ++RD+K DN
Sbjct: 74  TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 133

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR-------TDFYRDLSQAKPSDFSY----------- 115
           +LLD  GHIK++DFG+C               T  Y          +++           
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193

Query: 116 -------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA 167
                   PF  ++ +E +  +    D   +P    + +EA++ +V+ F  E ++RLG  
Sbjct: 194 YEMLIGQSPFHGQDEEELFHSIR--MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGVR 249

Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIPSAPL 225
               +++       FR ++W+ +  +    P   +VKS  D SNFD   +   E P    
Sbjct: 250 ---GDIR---QHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD--KEFLNEKPRLSF 301

Query: 226 PQDGEIIYKDW-VFINYTF 243
                I   D  +F N++F
Sbjct: 302 ADRALINSMDQNMFRNFSF 320

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 7e-09
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 12/86 (13%)

Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
           I+Y+D    N    +       +F +   N +   +              +  GTPDYIA
Sbjct: 124 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT------------NTFCGTPDYIA 171

Query: 291 PEVFLQTGYGPAADWWSLGVIMYEML 316
           PE+ L   Y  + DWWS GV++YEML
Sbjct: 172 PEILLGQKYNHSVDWWSFGVLLYEML 197

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 15/27 (55%), Positives = 19/27 (70%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APE+ L   Y  + DWWS GV++YEML
Sbjct: 171 APEILLGQKYNHSVDWWSFGVLLYEML 197

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 1e-29
 Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 33/210 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   LY  + +   G+++  + K  +  E CT+FY AE   A++ +H  G IHRD+KP+N
Sbjct: 79  DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 138

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDF---------YRDLSQAKPSDFS---------- 114
           +LL+   HI+++DFG    L    +            Y                      
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 198

Query: 115 --------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                    PPF + N    ++K++  +    FP +     +AR+ + +    +  +RL 
Sbjct: 199 IIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPEK--FFPKARDLVEKLLVLDATKRL- 253

Query: 166 SARGVEELKSLGACQFFRGVDWDHIRERPA 195
               +E    L A  FF  V W+++ ++  
Sbjct: 254 GCEEMEGYGPLKAHPFFESVTWENLHQQTP 283

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 2e-09
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)

Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
           II++D    N            +F  +     +SK+          A A S VGT  Y++
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----------ARANSFVGTAQYVS 178

Query: 291 PEVFLQTGYGPAADWWSLGVIMYEML 316
           PE+  +     ++D W+LG I+Y+++
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLV 204

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 8/28 (28%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++PE+  +     ++D W+LG I+Y+++
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLV 204

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  108 bits (271), Expect = 4e-28
 Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 30/172 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
                +L+ + +  G++   L +K TLSE+ T+  +      I ++HKL  +HRD+KP+N
Sbjct: 81  TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN 140

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYR------------------DLSQAKPSD--- 112
           +LLD   +IKL+DFG    L    +                            K  D   
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200

Query: 113 ---------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                       PPF         R +MS       P     S+  ++ + R
Sbjct: 201 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 47.8 bits (113), Expect = 6e-07
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFL------QTGYGPAADWWSLGVIMYEML 316
           S + +         GTP Y+APE+          GYG   D WS GVIMY +L
Sbjct: 157 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 209

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 305 WWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
             +   +  E++         GYG   D WS GVIMY +L
Sbjct: 170 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 209

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 5e-26
 Identities = 52/165 (31%), Positives = 71/165 (43%), Gaps = 27/165 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           D   +YLI+E+ P G +   L K     E+ T  YI E A A+   H    IHRDIKP+N
Sbjct: 77  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 136

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR-----TDFYRDLSQAKPSDFSY------------- 115
           LLL + G +K++DFG       S R     T  Y      +                   
Sbjct: 137 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 196

Query: 116 -----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                PPF +   QETY+++   R    FP    ++E AR+ I R
Sbjct: 197 FLVGKPPFEANTYQETYKRIS--RVEFTFPDF--VTEGARDLISR 237

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +  GT DY+ PE+     +    D WSLGV+ YE L
Sbjct: 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 198

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 305 WWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
               G + Y   + PE+     +    D WSLGV+ YE L
Sbjct: 162 TTLCGTLDY---LPPEMIEGRMHDEKVDLWSLGVLCYEFL 198

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (247), Expect = 1e-24
 Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 32/173 (18%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
              NL++++EF  GG +  ++++ +  L+E   Q    +T  A++ +H    IHRD+K  
Sbjct: 80  YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 139

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTD--------------FYRDLSQAKPSDFS---- 114
           N+L    G IKL+DFG+     ++ +                   + S+ +P D+     
Sbjct: 140 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 199

Query: 115 ------------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                        PP    NP     K+    +          S   ++ + +
Sbjct: 200 SLGITLIEMAEIEPPHHELNPMRVLLKIAK-SEPPTLAQPSRWSSNFKDFLKK 251

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)

Query: 279 AYSTVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEML 316
             S +GTP ++APEV +        Y   AD WSLG+ + EM 
Sbjct: 167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 209

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 2e-24
 Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 35/225 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               L+LI++++ GG++ T L +++  +E   Q Y+ E  LA++ +HKLG I+RDIK +N
Sbjct: 100 TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLEN 159

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQA----------------KPSD----- 112
           +LLD+ GH+ L+DFGL            Y                      K  D     
Sbjct: 160 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 219

Query: 113 -------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRL 164
                      PF  +  + +  ++         P    +S  A++ I R    +  +RL
Sbjct: 220 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 279

Query: 165 GSAR-GVEELKSLGACQFFRGVDWDHIRER--PAAIPVQVKSIDD 206
           G      +E+K      FF+ ++WD +  +  PA     ++   D
Sbjct: 280 GCGPRDADEIK---EHLFFQKINWDDLAAKKVPAPFKPVIRDELD 321

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFL--QTGYGPAADWWSLGVIMYEML 316
           ++ +  +    AY   GT +Y+AP++     +G+  A DWWSLGV+MYE+L
Sbjct: 176 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 226

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 305 WWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
            +     +  M         +G+  A DWWSLGV+MYE+L
Sbjct: 187 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 226

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 97.8 bits (243), Expect = 1e-23
 Identities = 41/240 (17%), Positives = 89/240 (37%), Gaps = 37/240 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   + +I EF+ GG++   +  +   +SE+    Y+ +    +  +H+  ++H D+KP+
Sbjct: 94  DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 153

Query: 73  NLLLDAR--GHIKLSDFGLCTGLKKSHRTDF------YRDLSQAKPSDFSY--------- 115
           N++   +    +KL DFGL   L              +     A+     Y         
Sbjct: 154 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 213

Query: 116 ---------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                     PF  EN  ET R V S    +       ISE+ ++ I +   ++ + R+ 
Sbjct: 214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM- 272

Query: 166 SARGVEELKSLGACQFFRGVDW-DHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAP 224
               + +        +    +      + P++   +++     + +D +P+    +    
Sbjct: 273 ---TIHQALE---HPWLTPGNAPGRDSQIPSSRYTKIRDSIK-TKYDAWPEPLPPLGRIS 325

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 52.0 bits (124), Expect = 4e-08
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +   + +     T GT ++ APEV      G   D WS+GV+ Y +L
Sbjct: 173 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 219

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APEV      G   D WS+GV+ Y +L
Sbjct: 192 AAPEVAEGKPVGYYTDMWSVGVLSYILL 219

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 97.1 bits (241), Expect = 2e-23
 Identities = 46/229 (20%), Positives = 82/229 (35%), Gaps = 36/229 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           D   + LI+EFL GG++   +  +D  +SE     Y+ +    +  +H+   +H DIKP+
Sbjct: 97  DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 156

Query: 73  NLLLDAR--GHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSY--------- 115
           N++ + +    +K+ DFGL T L           T  +            +         
Sbjct: 157 NIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 216

Query: 116 ---------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                     PF  E+  ET + V              +S EA++ I      E  +RL 
Sbjct: 217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL- 275

Query: 166 SARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFP 214
               V +        + +G D  ++  R  +             + D+P
Sbjct: 276 ---TVHDALE---HPWLKG-DHSNLTSRIPSSRYNKIRQKIKEKYADWP 317

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 52.8 bits (126), Expect = 2e-08
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           + K N   +   T  T ++ APE+  +   G   D W++GV+ Y +L
Sbjct: 176 ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 222

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 305 WWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
             +     +    APE+  +   G   D W++GV+ Y +L
Sbjct: 186 KVTTATAEF---AAPEIVDREPVGFYTDMWAIGVLGYVLL 222

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.5 bits (232), Expect = 1e-22
 Identities = 29/89 (32%), Positives = 48/89 (53%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
             YL +E+  GG++   +     + E   Q +  +    +  +H +G  HRDIKP+NLLL
Sbjct: 77  IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 136

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDL 105
           D R ++K+SDFGL T  + ++R      +
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKM 165

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 9e-10
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
           NR  L     GT  Y+APE+  +  +     D WS G+++  ML
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 200

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.9 bits (233), Expect = 2e-22
 Identities = 31/166 (18%), Positives = 50/166 (30%), Gaps = 26/166 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
                +L+ME+  G     L + K  L E             +  +H    IHRD+K  N
Sbjct: 86  REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 145

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR---TDFYRDLSQAKPSDFS---------------- 114
           +LL   G +KL DFG  + +  ++    T ++         D                  
Sbjct: 146 ILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205

Query: 115 -----YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                 PP  + N       +       +       SE  R  +  
Sbjct: 206 ELAERKPPLFNMNAMSALYHIAQNESPALQSGH--WSEYFRNFVDS 249

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 11/65 (16%)

Query: 279 AYSTVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
           A S VGTP ++APEV L   +  Y    D WSLG+   E+             P  +  +
Sbjct: 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA--------ERKPPLFNMNA 219

Query: 336 LGVIM 340
           +  + 
Sbjct: 220 MSALY 224

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 4e-22
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPD 72
               + + ME + GG +  +L K   + E+            +  +  K   +HRD+KP 
Sbjct: 75  SDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHRTDF 101
           N+L+++RG IKL DFG+   L  S    F
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANSF 163

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 8e-11
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +A S VGT  Y++PE    T Y   +D WS+G+ + EM 
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++PE    T Y   +D WS+G+ + EM 
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMA 197

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (224), Expect = 1e-21
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 41/174 (23%)

Query: 18  LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG-----FIHRD 68
           LY++ME+  GGD+ +++ K    +  L EE     + +  LA+   H+        +HRD
Sbjct: 80  LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 139

Query: 69  IKPDNLLLDARGHIKLSDFGLCTGLKK--SHRTDFYRDLSQAKPSDFS------------ 114
           +KP N+ LD + ++KL DFGL   L    S    F        P   +            
Sbjct: 140 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 199

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVR 155
                       PPF + + +E   K+   +        +P   S+E  E I R
Sbjct: 200 LGCLLYELCALMPPFTAFSQKELAGKIREGK-----FRRIPYRYSDELNEIITR 248

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 9e-09
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            A + VGTP Y++PE   +  Y   +D WSLG ++YE+
Sbjct: 170 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 207

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           ++PE   +  Y   +D WSLG ++YE+
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYEL 207

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.2 bits (218), Expect = 2e-20
 Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 36/226 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
              +LYLIM+ + GG++   +++K   +E      I +   A+  +H LG +HRD+KP+N
Sbjct: 78  SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPEN 137

Query: 74  LLL---DARGHIKLSDFGLCTGLKKSHR------TDFYR--DLSQAKPSDFS-------- 114
           LL    D    I +SDFGL               T  Y   ++   KP   +        
Sbjct: 138 LLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 197

Query: 115 --------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                   YPPF  EN  + + +++        P    IS+ A++ I      + ++R  
Sbjct: 198 IAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF- 256

Query: 166 SARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFD 211
                E+        +  G D    +    ++  Q+K     S + 
Sbjct: 257 ---TCEQALQ---HPWIAG-DTALDKNIHQSVSEQIKKNFAKSKWK 295

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S  ++  ++  +  GTP Y+APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 157 SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 203

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  Q  Y  A D WS+GVI Y +L
Sbjct: 176 VAPEVLAQKPYSKAVDCWSIGVIAYILL 203

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (216), Expect = 2e-20
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 38/196 (19%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L ++ ++  G  +   L   +T            +TA  +D +H    IHRD+K +N+ 
Sbjct: 77  QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136

Query: 76  LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQA------------------KPSD-FSY- 115
           L     +K+ DFGL T   +   +  +  LS +                    SD +++ 
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196

Query: 116 ----------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC----- 160
                      P+ + N ++    +       + P    +     + + R  +EC     
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 254

Query: 161 DRRLGSARGVEELKSL 176
           D R    + +  ++ L
Sbjct: 255 DERPLFPQILASIELL 270

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 1e-07
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 281 STVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEML 316
              G+  ++APEV     +  Y   +D ++ G+++YE++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 3e-20
 Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 37/203 (18%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           +  L+ME    G +   L +   + ++     + + ++ +  + +  F+HRD+   N+LL
Sbjct: 81  SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 140

Query: 77  DARGHIKLSDFGLCTGLKKSHRTD----------------FYRDLSQAKPSD-------- 112
             + + K+SDFGL   L+                             +  SD        
Sbjct: 141 VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 200

Query: 113 -----FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGS 166
                +   P+      E    +    + +  P   P   E  + +   +  + + R G 
Sbjct: 201 WEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCP--REMYDLMNLCWTYDVENRPGF 257

Query: 167 ARGVEELKSLGACQFFRGVDWDH 189
           A     L++     ++  V+  H
Sbjct: 258 AAVELRLRNY----YYDVVNEGH 276

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 1e-07
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                   + APE      +   +D WS GV+M+E  
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 204

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE      +   +D WS GV+M+E  
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAF 204

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 4e-20
 Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 29/168 (17%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
               L+++ME+L GG +  ++ +     E        E   A++ +H    IHRDIK DN
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTETCM-DEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHR-------TDFYRDLSQAKPSDFS------------ 114
           +LL   G +KL+DFG C  +            T ++          +             
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206

Query: 115 ------YPPFCSENPQET-YRKVMSWRDTLVFPPEVPISEEARETIVR 155
                  PP+ +ENP    Y    +    L  P +  +S   R+ + R
Sbjct: 207 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK--LSAIFRDFLNR 252

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 2e-09
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             + VGTP ++APEV  +  YGP  D WSLG++  EM+
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APEV  +  YGP  D WSLG++  EM+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 7e-20
 Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 27/169 (15%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
               L +I EF+ G D+   +      L+E     Y+ +   A+  +H     H DI+P+
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPE 131

Query: 73  NLLLDAR--GHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSD------ 112
           N++   R    IK+ +FG    LK                 + ++    +  +D      
Sbjct: 132 NIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGT 191

Query: 113 ------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                     PF +E  Q+    +M+   T        IS EA + + R
Sbjct: 192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                 P+Y APEV        A D WSLG ++Y +L
Sbjct: 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 319 PEVFLQTGYGPAADWWSLGVIMYEML 344
           PEV        A D WSLG ++Y +L
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLL 197

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 9e-20
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 28/169 (16%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIK 70
                + L+ E +  G + T L +   +  +  + +  +    +  +H      IHRD+K
Sbjct: 82  KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141

Query: 71  PDNLLLDAR-GHIKLSDFGLCTGLKKSHRTDF-----YRDLSQAK-----PSD------- 112
            DN+ +    G +K+ D GL T  + S          +      +       D       
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMC 201

Query: 113 -----FSYPPFC-SENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                 S  P+   +N  + YR+V S      F        E +E I  
Sbjct: 202 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK--VAIPEVKEIIEG 248

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-11
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 9/73 (12%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAA 331
              R + A + +GTP+++APE+  +  Y  + D ++ G+ M EM         T   P +
Sbjct: 163 TLKRASFAKAVIGTPEFMAPEM-YEEKYDESVDVYAFGMCMLEMA--------TSEYPYS 213

Query: 332 DWWSLGVIMYEML 344
           +  +   I   + 
Sbjct: 214 ECQNAAQIYRRVT 226

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 1e-19
 Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 33/172 (19%)

Query: 17  NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            L ++ME L GG++ + +  +     +E      +     AI  +H +   HRD+KP+NL
Sbjct: 83  CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 142

Query: 75  LLDAR---GHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFS----------- 114
           L  ++     +KL+DFG        +       T +Y       P  +            
Sbjct: 143 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 202

Query: 115 -------YPPFCSENPQET----YRKVMSWRDTLVFPPEVPISEEARETIVR 155
                  YPPF S +          ++   +     P    +SEE +  I  
Sbjct: 203 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 254

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 5e-07
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
            +   TP Y+APEV     Y  + D WSLGVIMY +
Sbjct: 171 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 206

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 8e-05
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
           +APEV     Y  + D WSLGVIMY +
Sbjct: 180 VAPEVLGPEKYDKSCDMWSLGVIMYIL 206

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 2e-19
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 34/191 (17%)

Query: 17  NLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            L L+ME   GG +   L+ K++ +        + + ++ +  + +  F+HRD+   N+L
Sbjct: 82  ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVL 141

Query: 76  LDARGHIKLSDFGLCTGLKKSHRT----------------DFYRDLSQAKPSD------- 112
           L  R + K+SDFGL   L                      +       +  SD       
Sbjct: 142 LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT 201

Query: 113 ------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLG 165
                 +   P+      E    +   +  +  PPE P   E    +   +  + + R  
Sbjct: 202 MWEALSYGQKPYKKMKGPEVMAFIEQGKR-MECPPECP--PELYALMSDCWIYKWEDRPD 258

Query: 166 SARGVEELKSL 176
                + +++ 
Sbjct: 259 FLTVEQRMRAC 269

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 8e-07
 Identities = 12/50 (24%), Positives = 19/50 (38%)

Query: 267 RAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +A     +      +      + APE      +   +D WS GV M+E L
Sbjct: 157 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 206

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
           APE      +   +D WS GV M+E L
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEAL 206

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (205), Expect = 5e-19
 Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 29/191 (15%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
           + +   LY++ E++  G ++  L  +    L  +C   +  +   A++ +    F+HRD+
Sbjct: 70  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 129

Query: 70  KPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSD------- 112
              N+L+      K+SDFGL      +  T          +  R+   +  SD       
Sbjct: 130 AARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 189

Query: 113 ------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
                 F   P+     ++   +V      +  P   P      E +      +   R  
Sbjct: 190 LWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAPDGCP--PAVYEVMKNCWHLDAAMRPS 246

Query: 166 SARGVEELKSL 176
             +  E+L+ +
Sbjct: 247 FLQLREQLEHI 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 4e-08
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +      + APE   +  +   +D WS G++++E+ 
Sbjct: 158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 194

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE   +  +   +D WS G++++E+ 
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIY 194

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 8e-18
 Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 32/169 (18%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            + ++ E  P G ++  L K            Y  + A  +  +    FIHRD+   NLL
Sbjct: 84  PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 143

Query: 76  LDARGHIKLSDFGLCTGLKKSHRT----------------DFYRDLSQAKPSD------- 112
           L  R  +K+ DFGL   L ++                   +  +  + +  SD       
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203

Query: 113 ------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                 +   P+   N  +   K+    + L  P + P  ++    +V+
Sbjct: 204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP--QDIYNVMVQ 250

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 4e-06
 Identities = 12/50 (24%), Positives = 19/50 (38%)

Query: 267 RAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           RA     +   +         + APE      +  A+D W  GV ++EM 
Sbjct: 159 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 9e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE      +  A+D W  GV ++EM 
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMF 208

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 9e-18
 Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 36/214 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
           +  ++ LI+E + GG++   L +K++L+EE    ++ +    +  +H L   H D+KP+N
Sbjct: 84  NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN 143

Query: 74  LLLDARG----HIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSYP------- 116
           ++L  R      IK+ DFGL   +   +       T  +                     
Sbjct: 144 IMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 203

Query: 117 -----------PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRL 164
                      PF  +  QET   V +             S  A++ I R    +  +R+
Sbjct: 204 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 263

Query: 165 GSARGVEELKSLGACQFFRGVDWDHIRERPAAIP 198
                +++        + +  D         + P
Sbjct: 264 ----TIQDSL---QHPWIKPKDTQQALSSAWSHP 290

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-08
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +  GTP+++APE+      G  AD WS+GVI Y +L
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 8e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE+      G  AD WS+GVI Y +L
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILL 210

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.6 bits (193), Expect = 4e-17
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 36/198 (18%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           ++    + +I EF+  G + + L + D   +       +   A  +  +  + ++HRD+ 
Sbjct: 96  VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA 155

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFY------------------RDLSQAKPSD 112
             N+L+++    K+SDFGL   L+       Y                  +       SD
Sbjct: 156 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 215

Query: 113 -------------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS- 158
                        +   P+     Q+    +         PP +       + ++     
Sbjct: 216 VWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPPPMDCPSALHQLMLDCWQK 272

Query: 159 ECDRRLGSARGVEELKSL 176
           + + R    + V  L  +
Sbjct: 273 DRNHRPKFGQIVNTLDKM 290

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 12/53 (22%), Positives = 22/53 (41%)

Query: 264 SKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           S+   +         A        + APE      +  A+D WS G++M+E++
Sbjct: 175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 227

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 7e-04
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 307 SLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +LG  +     APE      +  A+D WS G++M+E++
Sbjct: 190 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 227

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 78.2 bits (192), Expect = 4e-17
 Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 29/184 (15%)

Query: 18  LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
            Y++ME++ G  +  ++  +  ++ +     IA+   A++  H+ G IHRD+KP N+++ 
Sbjct: 86  PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 145

Query: 78  ARGHIKLSDFGLCTGLKKSHR----------TDFYRDLSQAKPSDFS------------- 114
           A   +K+ DFG+   +  S            T  Y    QA+                  
Sbjct: 146 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 205

Query: 115 -----YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSAR 168
                 PPF  ++P     + +             +S +    +++      + R  +A 
Sbjct: 206 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 265

Query: 169 GVEE 172
            +  
Sbjct: 266 EMRA 269

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 54.0 bits (129), Expect = 7e-09
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +   N      + +GT  Y++PE          +D +SLG ++YE+L
Sbjct: 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 208

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++PE          +D +SLG ++YE+L
Sbjct: 181 LSPEQARGDSVDARSDVYSLGCVLYEVL 208

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 7e-17
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 32/189 (16%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            +++IME    G++ + L  +  +L       Y  + + A+  +    F+HRDI   N+L
Sbjct: 81  PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL 140

Query: 76  LDARGHIKLSDFGLCTGLKKSHRT--------------DFYRDLSQAKPSD--------- 112
           + +   +KL DFGL   ++ S                 +          SD         
Sbjct: 141 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 200

Query: 113 ----FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA 167
                   PF      +   ++ +  + L  PP  P        + + +  +  RR    
Sbjct: 201 EILMHGVKPFQGVKNNDVIGRIENG-ERLPMPPNCP--PTLYSLMTKCWAYDPSRRPRFT 257

Query: 168 RGVEELKSL 176
               +L ++
Sbjct: 258 ELKAQLSTI 266

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 12/49 (24%), Positives = 21/49 (42%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +   + +    A        ++APE      +  A+D W  GV M+E+L
Sbjct: 155 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 1e-16
 Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            +Y+I E++  G ++  L       L+        A+ A  +  I +  +IHRD++  N+
Sbjct: 81  PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140

Query: 75  LLDARGHIKLSDFGLCTGLKKSHRT--------------DFYRDLSQAKPSD-FSY---- 115
           L+      K++DFGL   ++ +  T              +     +    SD +S+    
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200

Query: 116 --------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                    P+      E  + +      +V P   P  EE  + +  
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCP--EELYQLMRL 245

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 10/49 (20%), Positives = 19/49 (38%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           A   + N             + APE      +   +D WS G+++ E++
Sbjct: 156 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 2e-16
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 31/171 (18%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +    +++I E++  G ++  L   +     +       +   A++ +    F+HRD+  
Sbjct: 69  TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 128

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRT--------------DFYRDLSQAKPSD----- 112
            N L++ +G +K+SDFGL   +     T              +       +  SD     
Sbjct: 129 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188

Query: 113 --------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                       P+      ET   +      L  P      E+    +  
Sbjct: 189 VLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYRPHLAS--EKVYTIMYS 236

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +     +  PEV + + +   +D W+ GV+M+E+ 
Sbjct: 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
             PEV + + +   +D W+ GV+M+E+ 
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 3e-16
 Identities = 26/193 (13%), Positives = 53/193 (27%), Gaps = 53/193 (27%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKK-----------------------DTLSEECTQFYIA 50
               +YLI E+   GD++  L  K                       + L+ E    +  
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171

Query: 51  ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR---------TDF 101
           + A  ++ +     +HRD+   N+L+     +K+ DFGL   +                 
Sbjct: 172 QVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 231

Query: 102 YRDLSQAKPSDFSY-------------------PPFCSENPQETYRKVMSWRDTLVFPPE 142
           +          ++                     P+        + K++     +  P  
Sbjct: 232 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY 291

Query: 143 VPISEEARETIVR 155
               EE    +  
Sbjct: 292 AT--EEIYIIMQS 302

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 8e-06
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             +   +  +      ++APE   +  Y   +D WS G++++E+ 
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 260

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.5 bits (185), Expect = 4e-16
 Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 33/194 (17%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           +     Y+I EF+  G+++  L + +   +S     +   + + A++ + K  FIHRD+ 
Sbjct: 83  TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 142

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRTDF--------YRDLSQAKPSDFS-------- 114
             N L+     +K++DFGL   +     T          +        + FS        
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202

Query: 115 -----------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDR 162
                        P+   +  + Y  +      +  P   P  E+  E +   +      
Sbjct: 203 GVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCP--EKVYELMRACWQWNPSD 259

Query: 163 RLGSARGVEELKSL 176
           R   A   +  +++
Sbjct: 260 RPSFAEIHQAFETM 273

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 8/49 (16%), Positives = 18/49 (36%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +     +             + APE      +   +D W+ GV+++E+ 
Sbjct: 162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 5e-16
 Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 45/202 (22%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIH 60
            LYL +E+ P G+++  L K                  TLS +    + A+ A  +D + 
Sbjct: 85  YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQA 108
           +  FIHRD+   N+L+      K++DFGL  G +   +             +        
Sbjct: 145 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT 204

Query: 109 KPSD-FSY------------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
             SD +SY             P+C     E Y K+            +   +E  + + +
Sbjct: 205 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR---LEKPLNCDDEVYDLMRQ 261

Query: 156 -FCSECDRRLGSARGVEELKSL 176
            +  +   R   A+ +  L  +
Sbjct: 262 CWREKPYERPSFAQILVSLNRM 283

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                   ++A E    + Y   +D WS GV+++E++
Sbjct: 184 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.3 bits (184), Expect = 6e-16
 Identities = 26/196 (13%), Positives = 52/196 (26%), Gaps = 55/196 (28%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD------------------------TLSEECTQF 47
            +    + L+ E++  GD+   L                             LS      
Sbjct: 85  CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC 144

Query: 48  YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR--------- 98
              + A  +  + +  F+HRD+   N L+     +K++DFGL   +  +           
Sbjct: 145 IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI 204

Query: 99  TDFYRDLSQAKPSDFSY-------------------PPFCSENPQETYRKVMSWRDTLVF 139
              +        + ++                     P+     +E    V    + L  
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD-GNILAC 263

Query: 140 PPEVPISEEARETIVR 155
           P   P   E    +  
Sbjct: 264 PENCP--LELYNLMRL 277

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 3e-06
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +      ++ PE      Y   +D W+ GV+++E+ 
Sbjct: 201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 236

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (89), Expect = 7e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
            PE      Y   +D W+ GV+++E+ 
Sbjct: 210 PPESIFYNRYTTESDVWAYGVVLWEIF 236

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 6e-16
 Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 32/195 (16%)

Query: 12  MSDPINLYLIMEFL-PGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
              P +  LI+E   P  D+   + ++  L EE  + +  +   A+   H  G +HRDIK
Sbjct: 78  FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 137

Query: 71  PDNLLLDA-RGHIKLSDFGLCTGLKKSHRTDF-----YRDLSQAKPSDFS---------- 114
            +N+L+D  RG +KL DFG    LK +  TDF     Y      +   +           
Sbjct: 138 DENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 197

Query: 115 ---YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
              Y   C + P E   +++  R  + F     +S E +  I          R       
Sbjct: 198 ILLYDMVCGDIPFEHDEEII--RGQVFFRQR--VSSECQHLIRWCLALRPSDRP----TF 249

Query: 171 EELKSLGACQFFRGV 185
           EE++      + + V
Sbjct: 250 EEIQ---NHPWMQDV 261

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
               GT  Y  PE      Y G +A  WSLG+++Y+M+
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 1e-15
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 9/124 (7%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH--------KLGFIH 66
              L+L+ ++   G +   L  + T++ E        TA  +  +H        K    H
Sbjct: 73  WTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131

Query: 67  RDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQET 126
           RD+K  N+L+   G   ++D GL      +  T       +     +  P    ++    
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 191

Query: 127 YRKV 130
           + + 
Sbjct: 192 HFES 195

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 22/79 (27%)

Query: 266 RRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT 325
            R +S            VGT  Y+APEV   +                            
Sbjct: 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK----------------------HF 193

Query: 326 GYGPAADWWSLGVIMYEML 344
                AD +++G++ +E+ 
Sbjct: 194 ESFKRADIYAMGLVFWEIA 212

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 2e-15
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 30/149 (20%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
               ++  L G D+  LL K   LS +   +++ +    +  IH    +HRD+KP NLLL
Sbjct: 84  KDVYLVTHLMGADLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 142

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRD-------------LSQAKPSDFS--------- 114
           +    +K+ DFGL       H    +               +  +K    S         
Sbjct: 143 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 202

Query: 115 -------YPPFCSENPQETYRKVMSWRDT 136
                   P F  ++  +    ++    +
Sbjct: 203 LAEMLSNRPIFPGKHYLDQLNHILGILGS 231

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 4e-05
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 267 RAESWKKNRRALAYSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           R      +        V T  Y APE+ L   GY  + D WS+G I+ EML
Sbjct: 157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 207

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 2e-15
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
            +Y++ E++  G ++  L  +    L         A+ A  +  + ++ ++HRD++  N+
Sbjct: 85  PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 144

Query: 75  LLDARGHIKLSDFGLCTGLKKSHRT--------------DFYRDLSQAKPSD-------- 112
           L+      K++DFGL   ++ +  T              +          SD        
Sbjct: 145 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 204

Query: 113 -----FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR 155
                    P+     +E   +V      +  PPE P  E   + + +
Sbjct: 205 TELTTKGRVPYPGMVNREVLDQVERGYR-MPCPPECP--ESLHDLMCQ 249

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 5e-07
 Identities = 11/49 (22%), Positives = 19/49 (38%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           A   + N             + APE  L   +   +D WS G+++ E+ 
Sbjct: 160 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE  L   +   +D WS G+++ E+ 
Sbjct: 181 TAPEAALYGRFTIKSDVWSFGILLTELT 208

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-14
 Identities = 36/231 (15%), Positives = 78/231 (33%), Gaps = 35/231 (15%)

Query: 17  NLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
            + LI + +P G ++  +   KD +  +    +  + A  ++ +     +HRD+   N+L
Sbjct: 84  TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 143

Query: 76  LDARGHIKLSDFGLCTGLKKSHR---------TDFYRDLSQAKPSDFSY----------- 115
           +    H+K++DFGL   L    +            +  L       +++           
Sbjct: 144 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 203

Query: 116 --------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGS 166
                    P+      E    +    + L  PP      +    +V+ +  + D R   
Sbjct: 204 WELMTFGSKPYDGIPASEISSILEK-GERLPQPPICT--IDVYMIMVKCWMIDADSRPKF 260

Query: 167 ARGVEELKSLGA-CQFFRGVDWDHIRERPAAI-PVQVKSIDDTSNFDDFPD 215
              + E   +    Q +  +  D     P+       +++ D  + DD  D
Sbjct: 261 RELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVD 311

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 7e-06
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            + +   A        ++A E  L   Y   +D WS GV ++E++
Sbjct: 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 25/198 (12%), Positives = 65/198 (32%), Gaps = 26/198 (13%)

Query: 171 EELKSLGACQF---FRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLPQ 227
           +++K LG+  F   ++G+      +    IPV +K + + ++     ++  E        
Sbjct: 12  KKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEILDEAYVMASVD 69

Query: 228 DGEIIYKDWVFIN----YTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTV 283
           +  +     + +        +        ++     + + S+       +  + + Y   
Sbjct: 70  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129

Query: 284 GTPDY--IAPEVFLQTGYGPA---------------ADWWSLGVIMYEMLIAPEVFLQTG 326
               +  +A    L                       ++ + G  +    +A E  L   
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189

Query: 327 YGPAADWWSLGVIMYEML 344
           Y   +D WS GV ++E++
Sbjct: 190 YTHQSDVWSYGVTVWELM 207

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 32/192 (16%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAET-ALAIDSIHKLGFIHRDIKPD 72
           +   + L+ EF+  G +   L  +  L    T   +       +  + +   IHRD+   
Sbjct: 71  EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 130

Query: 73  NLLLDARGHIKLSDFGLCTGLKKSHR--------TDFYRDLSQAKPSDFS---------- 114
           N L+     IK+SDFG+   +                +        S +S          
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 190

Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRL 164
                      P+ + +  E    + +    L  P     S    + +     E  + R 
Sbjct: 191 LMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRLA--STHVYQIMNHCWKERPEDRP 247

Query: 165 GSARGVEELKSL 176
             +R + +L  +
Sbjct: 248 AFSRLLRQLAEI 259

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 4e-08
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
             T     + +PEVF  + Y   +D WS GV+M+E+ 
Sbjct: 160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            +PEVF  + Y   +D WS GV+M+E+ 
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 2e-14
 Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 28/186 (15%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKL 62
           +      R      L L+ E +       L    +  +  E  +  + +    +D +H  
Sbjct: 76  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 135

Query: 63  GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSY- 115
             +HRD+KP N+L+ + G IKL+DFGL               T +YR       S ++  
Sbjct: 136 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP 195

Query: 116 -----------------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
                            P F   +  +   K++   D +  P E     +       F S
Sbjct: 196 VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL---DVIGLPGEEDWPRDVALPRQAFHS 252

Query: 159 ECDRRL 164
           +  + +
Sbjct: 253 KSAQPI 258

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 3e-08
 Identities = 18/37 (48%), Positives = 20/37 (54%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            S V T  Y APEV LQ+ Y    D WS+G I  EM 
Sbjct: 173 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 209

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APEV LQ+ Y    D WS+G I  EM 
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMF 209

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 4e-14
 Identities = 27/189 (14%), Positives = 53/189 (28%), Gaps = 48/189 (25%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKD------------------TLSEECTQFYIAETAL 54
           +      +I E+   GD++  L +K                    L  E    +  + A 
Sbjct: 97  TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 156

Query: 55  AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR---------TDFYRDL 105
            +  +     IHRD+   N+LL      K+ DFGL   +K                +   
Sbjct: 157 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216

Query: 106 SQAKPSDFSY-------------------PPFCSENPQETYRKVMSWRDTLVFPPEVPIS 146
                  +++                    P+        + K++     ++ P   P  
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-- 274

Query: 147 EEARETIVR 155
            E  + +  
Sbjct: 275 AEMYDIMKT 283

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 10/54 (18%), Positives = 21/54 (38%)

Query: 263 DSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           D     +    +   +  +      ++APE      Y   +D WS G+ ++E+ 
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 4e-14
 Identities = 34/162 (20%), Positives = 53/162 (32%), Gaps = 29/162 (17%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLL---MKKDTLSEECTQFYIAETALAIDSIH 60
           Y         D + L L+++++P             K TL     + Y+ +   ++  IH
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139

Query: 61  KLGFIHRDIKPDNLLLDARG-HIKLSDFGLCTGLKKSHRTDFY-------------RDLS 106
             G  HRDIKP NLLLD     +KL DFG    L +      Y                 
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD 199

Query: 107 QAKPSD------------FSYPPFCSENPQETYRKVMSWRDT 136
                D               P F  ++  +   +++    T
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 9e-05
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEML 316
            S + +  Y APE+      Y  + D WS G ++ E+L
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.002
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 310 VIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +          +F  T Y  + D WS G ++ E+L
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.1 bits (168), Expect = 5e-14
 Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 27/192 (14%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +     L L+ E L       L + +  L     + ++ +    I   H    +HRD+KP
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR----------DLSQAKPSDFS------- 114
            NLL++  G +K++DFGL        R   +            L  +K    +       
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVG 188

Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLG 165
                     P F   +  +   ++     T        ++E  +        E      
Sbjct: 189 CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWES 248

Query: 166 SARGV-EELKSL 176
             +G+ E    L
Sbjct: 249 FLKGLDESGIDL 260

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 41.4 bits (96), Expect = 9e-05
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
              + T  Y AP+V + +  Y    D WS+G I  EM+
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 7e-14
 Identities = 37/205 (18%), Positives = 69/205 (33%), Gaps = 47/205 (22%)

Query: 17  NLYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIH 60
            L +I+EF   G++ T L                + KD L+ E    Y  + A  ++ + 
Sbjct: 92  PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 151

Query: 61  KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR---------TDFYRDLSQAKPS 111
               IHRD+   N+LL  +  +K+ DFGL   + K               +         
Sbjct: 152 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 211

Query: 112 DFSY-------------------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARET 152
            ++                     P+      E + + +     +  P     + E  +T
Sbjct: 212 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TTPEMYQT 269

Query: 153 IVR-FCSECDRRLGSARGVEELKSL 176
           ++  +  E  +R   +  VE L +L
Sbjct: 270 MLDCWHGEPSQRPTFSELVEHLGNL 294

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 7e-04
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                  ++APE      Y   +D WS GV+++E+ 
Sbjct: 195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 230

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 7e-14
 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 26/191 (13%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
                N+ L+ +F+     + +      L+    + Y+  T   ++ +H+   +HRD+KP
Sbjct: 69  FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP 128

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHR-------TDFYRDLSQA-------KPSD----- 112
           +NLLLD  G +KL+DFGL       +R       T +YR               D     
Sbjct: 129 NNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVG 188

Query: 113 -------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLG 165
                     P    ++  +   ++     T        +         +          
Sbjct: 189 CILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHI 248

Query: 166 SARGVEELKSL 176
            +   ++L  L
Sbjct: 249 FSAAGDDLLDL 259

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 282 TVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVF 322
            V T  Y APE+      YG   D W++G I+ E+L+     
Sbjct: 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL 201

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 299 YGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +G     ++  V+         +F    YG   D W++G I+ E+L
Sbjct: 150 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 195

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 7e-14
 Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 34/196 (17%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           +S    + +I E++  G +   L +KD   S       +   A  +  +  + ++HRD+ 
Sbjct: 78  ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLA 137

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRT----------------DFYRDLSQAKPSD-- 112
             N+L+++    K+SDFGL   L+                     +          SD  
Sbjct: 138 ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVW 197

Query: 113 -----------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-EC 160
                      +   P+   +  E  + +    D    P  +       + +++    E 
Sbjct: 198 SFGIVMWEVMTYGERPYWELSNHEVMKAI---NDGFRLPTPMDCPSAIYQLMMQCWQQER 254

Query: 161 DRRLGSARGVEELKSL 176
            RR   A  V  L  L
Sbjct: 255 ARRPKFADIVSILDKL 270

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 7e-06
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
                  + APE      +  A+D WS G++M+E++   E  
Sbjct: 172 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 213

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            APE      +  A+D WS G++M+E++
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVM 207

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 1e-13
 Identities = 25/178 (14%), Positives = 51/178 (28%), Gaps = 30/178 (16%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
           ++YL+ +F        L       +    +  +      +  IH+   +HRD+K  N+L+
Sbjct: 91  SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 150

Query: 77  DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQA------------------KPSDF----- 113
              G +KL+DFGL      +  +   R  ++                    P D      
Sbjct: 151 TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 210

Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRL 164
                    P       Q     +     ++       +        +       R++
Sbjct: 211 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV 268

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 6e-06
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 266 RRAESWKKNRRALAYSTVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
           R     K ++     + V T  Y  PE+ L +  YGP  D W  G IM EM 
Sbjct: 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 216

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 1e-13
 Identities = 29/197 (14%), Positives = 69/197 (35%), Gaps = 35/197 (17%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIK 70
           +    +  +++ ++  GD+   +  +              + A  +  +    F+HRD+ 
Sbjct: 98  LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLA 157

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP-----------------SD- 112
             N +LD +  +K++DFGL   +        +       P                 SD 
Sbjct: 158 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 217

Query: 113 FSY------------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSE 159
           +S+            PP+   N  +    ++  R  L+ P   P  +   E +++ +  +
Sbjct: 218 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LLQPEYCP--DPLYEVMLKCWHPK 274

Query: 160 CDRRLGSARGVEELKSL 176
            + R   +  V  + ++
Sbjct: 275 AEMRPSFSELVSRISAI 291

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 4e-07
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
                  ++A E      +   +D WS GV+++E++
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 309 GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           G  +    +A E      +   +D WS GV+++E++
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 2e-13
 Identities = 48/261 (18%), Positives = 82/261 (31%), Gaps = 35/261 (13%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG 63
                   + D  + YL+M F+  G  +  LMK + L E+  QF + +    +  IH  G
Sbjct: 84  DVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 141

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTD-----------FYRDLSQAKPSD 112
            IHRD+KP NL ++    +K+ DFGL                          +   +  D
Sbjct: 142 IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVD 201

Query: 113 ------------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC 160
                            F   +  +  +++M    T   P E     ++ E         
Sbjct: 202 IWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT--PPAEFVQRLQSDEAKNYMKGLP 259

Query: 161 DRRLGSARGVEELKSLGACQFFRG-VDWDHIRERPAAIPVQ----VKSIDDTSNFDDFP- 214
           +        +    S  A       +  D   +R  A         +S+ DT +      
Sbjct: 260 ELEKKDFASILTNASPLAVNLLEKMLVLDA-EQRVTAGEALAHPYFESLHDTEDEPQVQK 318

Query: 215 -DVKLEIPSAPLPQDGEIIYK 234
            D   +     L +   + YK
Sbjct: 319 YDDSFDDVDRTLDEWKRVTYK 339

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 8e-05
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 256 LSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYE 314
           L+     + K       +   +     V T  Y APEV L    Y    D WS+G IM E
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211

Query: 315 ML 316
           M+
Sbjct: 212 MI 213

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 64.9 bits (157), Expect = 2e-12
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
              L+ E +   D   L     TL++   +FY+ E   A+D  H +G +HRD+KP N+++
Sbjct: 106 TPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162

Query: 77  DARG-HIKLSDFGLCTGLKKSHRTDFY 102
           D     ++L D+GL          +  
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVR 189

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEML 316
              V +  +  PE+ +    Y  + D WSLG ++  M+
Sbjct: 187 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 4e-12
 Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 48/210 (22%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLM----------------KKDTLSEECTQFYIAETALA 55
            +    LY+I+E+   G++   L                  ++ LS +       + A  
Sbjct: 88  CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147

Query: 56  IDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHR---------------TD 100
           ++ +     IHRD+   N+L+     +K++DFGL   +                     +
Sbjct: 148 MEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 207

Query: 101 FYRDLSQAKPSD-------------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISE 147
              D      SD                 P+     +E ++ +      +  P     + 
Sbjct: 208 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDKPSN--CTN 264

Query: 148 EARETIVRFCSEC-DRRLGSARGVEELKSL 176
           E    +         +R    + VE+L  +
Sbjct: 265 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
            +      ++APE      Y   +D WS GV+++E+ 
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.002
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           +APE      Y   +D WS GV+++E+ 
Sbjct: 204 MAPEALFDRIYTHQSDVWSFGVLLWEIF 231

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 6e-12
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 15/173 (8%)

Query: 17  NLYLIMEFLPGGDMMTLLMKKD----------TLSEECTQFYIAETALAIDSIHKLGFIH 66
              +IME +  GD+ + L                S         E A  +  ++   F+H
Sbjct: 97  PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 156

Query: 67  RDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQET 126
           RD+   N ++     +K+ DFG+   + ++             P  +  P    +    T
Sbjct: 157 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--KGLLPVRWMSPESLKDGVFTT 214

Query: 127 YRKVMSWRDTL---VFPPEVPISEEARETIVRFCSECDRRLGSARGVEELKSL 176
           Y  V S+   L       E P    + E ++RF  E           + L  L
Sbjct: 215 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 267

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 8/34 (23%), Positives = 18/34 (52%)

Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           +    +++PE      +   +D WS GV+++E+ 
Sbjct: 196 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 229

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 6e-12
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 5/128 (3%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
           +     L L+ EF               L  E  + ++ +    +   H    +HRD+KP
Sbjct: 70  LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP 129

Query: 72  DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVM 131
            NLL++  G +KL++FGL        R       S    + +  PP      +     + 
Sbjct: 130 QNLLINRNGELKLANFGLARAFGIPVRC-----YSAEVVTLWYRPPDVLFGAKLYSTSID 184

Query: 132 SWRDTLVF 139
            W    +F
Sbjct: 185 MWSAGCIF 192

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 283 VGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
           V T  Y  P+V      Y  + D WS G I  E+ 
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.004
 Identities = 9/35 (25%), Positives = 13/35 (37%)

Query: 310 VIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
           V+         +F    Y  + D WS G I  E+ 
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 62.9 bits (152), Expect = 7e-12
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
            + ++  L+++ L       L +     S +       +    + SIH+   ++RDIKPD
Sbjct: 71  QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPD 130

Query: 73  NLLLDA-----RGHIKLSDFGLCTGLKKS 96
           N L+          I + DFG+    +  
Sbjct: 131 NFLIGRPNSKNANMIYVVDFGMVKFYRDP 159

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 13/86 (15%), Positives = 28/86 (32%)

Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
           ++Y+D    N+   R  + +     +     +   R   + +        +  GT  Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181

Query: 291 PEVFLQTGYGPAADWWSLGVIMYEML 316
               L        D  +LG +    L
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFL 207

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 46.7 bits (110), Expect = 2e-06
 Identities = 5/28 (17%), Positives = 9/28 (32%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
           ++    L        D  +LG +    L
Sbjct: 180 MSINTHLGREQSRRDDLEALGHVFMYFL 207

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (150), Expect = 2e-11
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 27/156 (17%)

Query: 5   ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGF 64
               Q  + +  ++YL+ME +       + M+ D    E   + + +    I  +H  G 
Sbjct: 84  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGI 140

Query: 65  IHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFY------------RDLSQAKPSD 112
           IHRD+KP N+++ +   +K+ DFGL      S     Y              +   +  D
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200

Query: 113 FS------------YPPFCSENPQETYRKVMSWRDT 136
                            F   +  + + KV+    T
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 2e-04
 Identities = 18/37 (48%), Positives = 20/37 (54%)

Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
              V T  Y APEV L  GY    D WS+G IM EM+
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 2e-10
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 24/183 (13%)

Query: 4   YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG 63
                  R  +  N   ++  L G D+  + +K   L+++  QF I +    +  IH   
Sbjct: 83  LDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSAD 141

Query: 64  FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSY-------- 115
            IHRD+KP NL ++    +K+ DFGL                 +A     ++        
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201

Query: 116 ---------------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC 160
                            F   +  +  + ++    T        IS E+    ++  ++ 
Sbjct: 202 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 261

Query: 161 DRR 163
            + 
Sbjct: 262 PKM 264

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
              V T  Y APE+ L    Y    D WS+G IM E+L
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.3 bits (140), Expect = 3e-10
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 3/93 (3%)

Query: 13  SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
           ++     ++ME L               S +       +    I+ IH   FIHRD+KPD
Sbjct: 73  AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPD 132

Query: 73  NLL---LDARGHIKLSDFGLCTGLKKSHRTDFY 102
           N L         + + DFGL    + +      
Sbjct: 133 NFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.3 bits (127), Expect = 1e-08
 Identities = 9/49 (18%), Positives = 15/49 (30%)

Query: 268 AESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
           A + +        +  GT  Y +    L        D  SLG ++    
Sbjct: 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 207

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.7 bits (102), Expect = 2e-05
 Identities = 5/28 (17%), Positives = 8/28 (28%)

Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
            +    L        D  SLG ++    
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFN 207

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-09
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 12  MSDPINLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
           +     LYL+ EFL       +     T +     + Y+ +    +   H    +HRD+K
Sbjct: 70  IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLK 129

Query: 71  PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
           P NLL++  G IKL+DFGL        RT  + 
Sbjct: 130 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 1e-06
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 280 YSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
              V T  Y APE+ L   Y   A D WSLG I  EM+
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
           APE+ L   Y   A D WSLG I  EM+
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMV 197

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.2 bits (119), Expect = 6e-08
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 8/90 (8%)

Query: 14  DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
                 ++ME +   ++  +         E     +      +   +  G +H D+   N
Sbjct: 81  AWEGNAVLMELIDAKELYRV-------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYN 133

Query: 74  LLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
           +L+   G I + DF     + +    +   
Sbjct: 134 VLVSEEG-IWIIDFPQSVEVGEEGWREILE 162

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (98), Expect = 5e-05
 Identities = 17/69 (24%), Positives = 29/69 (42%)

Query: 248 ANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWS 307
            N   E   S  N +  K               +++ T +Y +PEV L   +G  AD WS
Sbjct: 155 ENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 214

Query: 308 LGVIMYEML 316
              +++E++
Sbjct: 215 TACLIFELI 223

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (91), Expect = 4e-04
 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 15  PINLYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIH-KLGFIHRDIK 70
           P  ++++M F   G+ +  L+KK     +     +    +  L +D +H + G IH DIK
Sbjct: 94  PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK 153

Query: 71  PDNLLLDARG------HIKLSDFGLCTGLKKSH 97
           P+N+L++          IK++D G      + +
Sbjct: 154 PENVLMEIVDSPENLIQIKIADLGNACWYDEHY 186

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.6 bits (83), Expect = 0.003
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 305 WWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
             S+    Y    +PEV L   +G  AD WS   +++E++
Sbjct: 187 TNSIQTREY---RSPEVLLGAPWGCGADIWSTACLIFELI 223

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	351
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.96
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.95
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.95
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.95
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.95
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.94
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.93
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.93
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.93
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.92
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.92
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.92
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.92
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.92
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.91
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.9
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.9
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.9
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.9
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.9
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.89
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.89
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.89
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.89
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.89
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.88
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.88
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.88
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.88
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.85
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.85
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.85
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.83
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.74
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.38
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.18
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.17
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.17
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.15
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.14
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.11
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.08
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.05
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	97.95
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.94
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.92
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.89
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.88
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	97.76
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.72
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	97.69
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	97.68
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	97.68
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	97.64
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.57
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.57
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.56
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	97.48
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	97.42
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	97.42
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	97.38
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	97.37
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.33
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.32
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.32
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	97.3
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	97.28
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.27
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	97.26
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	97.25
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.25
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	97.23
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.23
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.21
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	97.2
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.19
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.12
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.12
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.1
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	97.1
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.08
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	97.08
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.03
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.02
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.01
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	96.93
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	96.86
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	96.83
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	96.79
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	96.79
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	96.76
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	96.67
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.57
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	96.5
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	96.42
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.11
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.35
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	90.49
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	85.0
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	83.58

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-35  Score=279.60  Aligned_cols=202  Identities=27%  Similarity=0.514  Sum_probs=168.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||+||+|..++.+.+.+++..++.|+.|++.||+|||++|||||||||+|||++.+|++|
T Consensus        66 ~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vk  145 (337)
T d1o6la_          66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK  145 (337)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             CEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEE
Confidence            56778889999999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--cccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH--RTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~--~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+......  .....+++.           +....|+            +.+||.+.+..++++.+..  ..+.
T Consensus       146 l~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~--~~~~  223 (337)
T d1o6la_         146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--EEIR  223 (337)
T ss_dssp             ECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC
T ss_pred             EeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc--CCCC
Confidence            99999998653321  112222222           3333443            2799999999999999987  4567


Q ss_pred             CCCCCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~  212 (351)
                      +|..  +|++++|+|.++ ..||.+|++.. .++++++   .||||+++||+.+.++..  |+.|.+.+..|+++|++
T Consensus       224 ~p~~--~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil---~Hp~f~~i~~~~l~~~~~~~p~~P~~~~~~~~~~f~~  296 (337)
T d1o6la_         224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM---EHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD  296 (337)
T ss_dssp             CCTT--SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCH
T ss_pred             CCcc--CCHHHHHHHHhhccCCchhhcccccccHHHHH---cCcccccCCHHHHHhCCCCCCCCCCCCChhhhhhcCc
Confidence            7764  899999999994 57999999975 3578888   889999999999987754  44467788999999985

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.3e-34  Score=266.35  Aligned_cols=208  Identities=31%  Similarity=0.628  Sum_probs=157.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||.||+|..++.....+++..++.++.||+.||.|||++|||||||||+|||++.+|.+|
T Consensus        65 nIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vk  144 (316)
T d1fota_          65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIK  144 (316)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEE
T ss_pred             ChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEE
Confidence            56778888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSHR----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~~----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      |+|||+|+.......    |..|..      ..+....|+            +.+||.+.+..+++.+|...  ...+|+
T Consensus       145 L~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~p~  222 (316)
T d1fota_         145 ITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--ELRFPP  222 (316)
T ss_dssp             ECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CCCCCT
T ss_pred             EecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC--CCCCCC
Confidence            999999987643321    112211      223333343            37999999999999999874  456665


Q ss_pred             CCCCCHHHHHHHHHHh-cCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCC--c-ccCCCCcCCCCCCCCCC
Q psy17600        142 EVPISEEARETIVRFC-SECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIP--V-QVKSIDDTSNFDDFPDV  216 (351)
Q Consensus       142 ~~~~s~~~~dli~~l~-~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~--~-~~~~~~d~~~f~~~~~~  216 (351)
                      .  +|++++++|.+++ .+|.+|++.. ..++++.   .||||++++|+.|.++...+|  | ...+..|+++|+++++.
T Consensus       223 ~--~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il---~Hp~f~~i~~~~l~~~~~~~p~~p~~~~~~~d~~~f~~~~~~  297 (316)
T d1fota_         223 F--FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK---NHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEE  297 (316)
T ss_dssp             T--SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHH---TSGGGSSCCHHHHHTTCSCCSCCCCC----------------
T ss_pred             C--CCHHHHHHHHHHhhhCHHhccccchhhHHHHH---cCcccccCCHHHHHhCCCCcCCCCCcCCCcchhhhcCCCccc
Confidence            4  7899999999955 7999999875 4788888   889999999999977754433  2 34567899999988765


Q ss_pred             CC
Q psy17600        217 KL  218 (351)
Q Consensus       217 ~~  218 (351)
                      +.
T Consensus       298 ~~  299 (316)
T d1fota_         298 DI  299 (316)
T ss_dssp             CC
T ss_pred             cc
Confidence            44

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-33  Score=264.12  Aligned_cols=207  Identities=31%  Similarity=0.612  Sum_probs=170.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+||||+.||+|..++.+.+.+++..++.++.||+.||.|||++|||||||||+|||++.+|++|
T Consensus       102 nIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ik  181 (350)
T d1rdqe_         102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ  181 (350)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred             cEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEE
Confidence            56777888999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC
Q psy17600         84 LSDFGLCTGLKKSHR----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP  141 (351)
Q Consensus        84 l~DFGla~~~~~~~~----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~  141 (351)
                      |+|||+|+.+.....    +..|..      ..+....|+            +.+||.+.+...++.+|...  .+.+|.
T Consensus       182 L~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~p~  259 (350)
T d1rdqe_         182 VTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPS  259 (350)
T ss_dssp             ECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCT
T ss_pred             eeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC--CCCCCc
Confidence            999999987653321    222221      122333343            37999999999999999874  455555


Q ss_pred             CCCCCHHHHHHHHHH-hcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCCCCCCC
Q psy17600        142 EVPISEEARETIVRF-CSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDDFPDVK  217 (351)
Q Consensus       142 ~~~~s~~~~dli~~l-~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~~~~~~  217 (351)
                        .+|++++++|.++ ..||.+|++.. ..++++.   .||||+++||+.+.++..  |+.|.+.+..|++||+++.+.+
T Consensus       260 --~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell---~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~~d~s~~~~~~~~~  334 (350)
T d1rdqe_         260 --HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK---NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE  334 (350)
T ss_dssp             --TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCCCCCC
T ss_pred             --cCCHHHHHHHHHHhhhCHHhccccccccHHHHH---cCccccCCCHHHHHhcCCCcCccCCCCCcchhhhcCCCCccc
Confidence              4899999999995 57999998764 4688888   889999999999987754  4445677889999999877544

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-33  Score=260.72  Aligned_cols=199  Identities=30%  Similarity=0.564  Sum_probs=149.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.....+++..++.++.||+.||+|||++|||||||||+|||++.++++|
T Consensus        64 ~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~k  143 (320)
T d1xjda_          64 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIK  143 (320)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             cEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCcee
Confidence            56778889999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC--c-----cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCcee
Q psy17600         84 LSDFGLCTGLKKSH--R-----TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLV  138 (351)
Q Consensus        84 l~DFGla~~~~~~~--~-----~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~  138 (351)
                      |+|||+|+......  .     |..|..      ..+....|+            +.+||.+.++.+++.+|..  ..+.
T Consensus       144 l~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~  221 (320)
T d1xjda_         144 IADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNPF  221 (320)
T ss_dssp             ECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC
T ss_pred             ccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC
Confidence            99999998543221  1     112211      122333343            3799999999999999986  3456


Q ss_pred             CCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCC--CCCcccCCCCcCCCCCC
Q psy17600        139 FPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPA--AIPVQVKSIDDTSNFDD  212 (351)
Q Consensus       139 ~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~--~~~~~~~~~~d~~~f~~  212 (351)
                      +|..  +|++++++|.+ |..+|.+|++..   .+++   .||||++++|+.+..+..  |+.|.+++..|.+||+.
T Consensus       222 ~p~~--~s~~~~dli~~~L~~dP~~R~s~~---~~l~---~hpff~~~~~~~l~~~~~~pp~~p~~~~~~d~~~f~~  290 (320)
T d1xjda_         222 YPRW--LEKEAKDLLVKLFVREPEKRLGVR---GDIR---QHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK  290 (320)
T ss_dssp             CCTT--SCHHHHHHHHHHSCSSGGGSBTTB---SCGG---GSGGGTTCCHHHHHTTCSCC-----------------
T ss_pred             CCcc--CCHHHHHHHHHhcccCCCCCcCHH---HHHH---hCchhccCCHHHHHhcCCCCCCCCCCCCccchhhcCh
Confidence            6654  79999999999 558999999853   2455   899999999999976644  44567888999999975

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-33  Score=256.96  Aligned_cols=186  Identities=30%  Similarity=0.593  Sum_probs=152.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++..++|||||||+||+|.+++...+.+++..++.++.|++.||+|||++|||||||||+|||++.+|.+|
T Consensus        69 nIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vk  148 (288)
T d1uu3a_          69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQ  148 (288)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEE
T ss_pred             CeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEE
Confidence            56777888999999999999999999999999889999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC---------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         84 LSDFGLCTGLKKSH---------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        84 l~DFGla~~~~~~~---------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      |+|||+|+.+....         .|..|..      ..+....|+            +.+||.+.+..+++++|...  .
T Consensus       149 l~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--~  226 (288)
T d1uu3a_         149 ITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E  226 (288)
T ss_dssp             ECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT--C
T ss_pred             ecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC--C
Confidence            99999998654221         1222221      122223333            37999999999999999874  4


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCC--CChHHHhcCCCCCCccCCCchhhhcCCCC
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSA--RGVEELKSLGACQFFRGVDWDHIRERPAA  196 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~--~~~~~i~~~~~h~ff~~idw~~l~~~~~~  196 (351)
                      +.+|..  +|++++++|.+ |..||.+|++..  .+..+++   +||||+++||+.|.++.+|
T Consensus       227 ~~~p~~--~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~---~Hpff~~i~w~~l~~~~pP  284 (288)
T d1uu3a_         227 YDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLK---AHPFFESVTWENLHQQTPP  284 (288)
T ss_dssp             CCCCTT--CCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHH---TSGGGTTCCCTTGGGSCCC
T ss_pred             CCCCcc--CCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHH---cCCccCCCCHHHhhcCCCC
Confidence            567754  89999999999 558999999864  2444566   8999999999999887654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=1.4e-31  Score=255.77  Aligned_cols=188  Identities=29%  Similarity=0.546  Sum_probs=148.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.+...+++..++.++.||+.||.|||++|||||||||+|||++.+|.+|
T Consensus        68 nIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iK  147 (364)
T d1omwa3          68 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR  147 (364)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEE
T ss_pred             cEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEE
Confidence            46777888999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-----cccccc-------CCCCCCccc------------CCCCCCCCCHHH---HHHHHHcCCCc
Q psy17600         84 LSDFGLCTGLKKSHR-----TDFYRD-------LSQAKPSDF------------SYPPFCSENPQE---TYRKVMSWRDT  136 (351)
Q Consensus        84 l~DFGla~~~~~~~~-----~~~~~~-------~~~~~~~~~------------~~~Pf~~~~~~~---~~~~i~~~~~~  136 (351)
                      |+|||+|+.+.....     |..|..       ..+....|+            +.+||.+.+...   +.+.+..  ..
T Consensus       148 l~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~--~~  225 (364)
T d1omwa3         148 ISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MA  225 (364)
T ss_dssp             ECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSS--CC
T ss_pred             EeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc--CC
Confidence            999999986654332     222221       122333343            278998765433   3333332  33


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCC-CCChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGS-ARGVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~-~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      ..+|.  .+|++++++|.+ |..||.+|++. ..++++++   .||||+++||+.+..++.++|
T Consensus       226 ~~~~~--~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil---~Hp~f~~i~~~~~~~~~~~~p  284 (364)
T d1omwa3         226 VELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK---ESPFFRSLDWQMVFLQKYPPP  284 (364)
T ss_dssp             CCCCS--SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHH---TSGGGTTCCHHHHHTTCSCCS
T ss_pred             CCCCC--CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHH---cCccccCCCHHHHhcCCCCcC
Confidence            44454  389999999999 55899999996 35688888   889999999999977654433

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-31  Score=242.69  Aligned_cols=90  Identities=31%  Similarity=0.499  Sum_probs=84.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|||||||+||+|.+++.+.+.+++..++.++.|++.||+|||++|||||||||+|||++.++.+|
T Consensus        64 nIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~K  143 (271)
T d1nvra_          64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLK  143 (271)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEE
T ss_pred             CEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEE
Confidence            46677888999999999999999999999998888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccC
Q psy17600         84 LSDFGLCTGL   93 (351)
Q Consensus        84 l~DFGla~~~   93 (351)
                      |+|||+|+.+
T Consensus       144 L~DFG~a~~~  153 (271)
T d1nvra_         144 ISDFGLATVF  153 (271)
T ss_dssp             ECCCTTCEEC
T ss_pred             Eccchhheee
Confidence            9999998643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-30  Score=244.16  Aligned_cols=88  Identities=26%  Similarity=0.421  Sum_probs=82.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..|++..++|||||||+||+|.+++.+.+.+++..++.++.|++.||.|||+ +|||||||||+|||++.+|.+
T Consensus        65 nIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~v  144 (322)
T d1s9ja_          65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI  144 (322)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCE
T ss_pred             CCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCE
Confidence            4677788899999999999999999999999988899999999999999999999997 599999999999999999999


Q ss_pred             EEEecCccc
Q psy17600         83 KLSDFGLCT   91 (351)
Q Consensus        83 kl~DFGla~   91 (351)
                      ||+|||+|+
T Consensus       145 kl~DFGla~  153 (322)
T d1s9ja_         145 KLCDFGVSG  153 (322)
T ss_dssp             EECCCCCCH
T ss_pred             EEeeCCCcc
Confidence            999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-29  Score=230.01  Aligned_cols=169  Identities=32%  Similarity=0.476  Sum_probs=141.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++|||||||||+|||++.++.+|
T Consensus        67 nIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~k  146 (263)
T d2j4za1          67 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK  146 (263)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             CCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEe
Confidence            46677888999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcccccccC-----------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCC
Q psy17600         84 LSDFGLCTGLKKSHRTDFYRDL-----------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFP  140 (351)
Q Consensus        84 l~DFGla~~~~~~~~~~~~~~~-----------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p  140 (351)
                      |+|||+|+...........++.           .+....|+            +.+||.+.+..+++.+|...  .+.+|
T Consensus       147 l~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~p  224 (263)
T d2j4za1         147 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFP  224 (263)
T ss_dssp             ECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCC
T ss_pred             ecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCC
Confidence            9999999876544332222222           23334443            37999999999999999863  45566


Q ss_pred             CCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        141 PEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       141 ~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      ..  +|++++++|.+ |..+|.+|.+    ++++.   .||||.
T Consensus       225 ~~--~s~~~~~li~~~L~~dp~~R~t----~~eil---~hp~~~  259 (263)
T d2j4za1         225 DF--VTEGARDLISRLLKHNPSQRPM----LREVL---EHPWIT  259 (263)
T ss_dssp             TT--SCHHHHHHHHHHTCSSGGGSCC----HHHHH---TCHHHH
T ss_pred             cc--CCHHHHHHHHHHccCCHhHCcC----HHHHH---cCcCcC
Confidence            54  79999999999 5579999985    67777   889996

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-28  Score=228.63  Aligned_cols=188  Identities=21%  Similarity=0.322  Sum_probs=139.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC---
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG---   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~---   80 (351)
                      +++.++..|++...+|||||||+||+|.+++.+.+.+++..++.++.|++.||.|||+++|+||||||+|||++.++   
T Consensus        74 nIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~  153 (293)
T d1jksa_          74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK  153 (293)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSS
T ss_pred             CCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcc
Confidence            56677888999999999999999999999998888999999999999999999999999999999999999998776   


Q ss_pred             -cEEEEecCccccCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC
Q psy17600         81 -HIKLSDFGLCTGLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        81 -~~kl~DFGla~~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                       .+|++|||+|+.......      +..|..      ..+....|+            +.+||.+.+..+++.+|.....
T Consensus       154 ~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~  233 (293)
T d1jksa_         154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY  233 (293)
T ss_dssp             CCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC
T ss_pred             cceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC
Confidence             599999999986543321      112221      122233333            2799999999999999987543


Q ss_pred             ceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhhhcCCCCCC
Q psy17600        136 TLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIP  198 (351)
Q Consensus       136 ~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~  198 (351)
                      ....+....+|++++++|.+ |..+|.+|.+    ++++.   .||||++.+|+.........|
T Consensus       234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil---~hp~~~~~~~~~~l~~~~~~P  290 (293)
T d1jksa_         234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSL---QHPWIKPKDTQQALSSAWSHP  290 (293)
T ss_dssp             CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---HSTTTCC-------------C
T ss_pred             CCCchhcCCCCHHHHHHHHHHccCChhHCcC----HHHHh---cCcccCCCChhHhhccCCCCc
Confidence            22221123479999999999 5579999985    67787   789999999998876654433

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.95  E-value=2.4e-28  Score=224.68  Aligned_cols=174  Identities=28%  Similarity=0.405  Sum_probs=142.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++..++|||||||+||+|.+++..++.+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        71 nIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~k  150 (277)
T d1phka_          71 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIK  150 (277)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred             CeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeE
Confidence            56778889999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc------ccccccC------------CCCCCccc------------CCCCCCCCCHHHHHHHHHcC
Q psy17600         84 LSDFGLCTGLKKSHR------TDFYRDL------------SQAKPSDF------------SYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~------~~~~~~~------------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      |+|||+|+.+.....      +..|..+            .+....|+            +..||.+.+....++.|...
T Consensus       151 l~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~  230 (277)
T d1phka_         151 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG  230 (277)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhC
Confidence            999999986543221      1111111            11222343            27999999999999999986


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ...+..|....+|++++++|.+ |..+|.+|..    ++++.   .||||+.
T Consensus       231 ~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s----~~eil---~h~~~~~  275 (277)
T d1phka_         231 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEAL---AHPFFQQ  275 (277)
T ss_dssp             CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHT---TSGGGCT
T ss_pred             CCCCCCcccccCCHHHHHHHHHHccCChhHCcC----HHHHH---cCHHHHH
Confidence            5555555545689999999999 5579999996    56776   8999985

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-28  Score=231.26  Aligned_cols=198  Identities=28%  Similarity=0.588  Sum_probs=150.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++...+|+|||||.||+|.+++...+.+++..++.++.|++.||+|+|+++|+||||||+|||++.+|.+|
T Consensus        90 nIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vk  169 (322)
T d1vzoa_          90 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV  169 (322)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             eEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEE
Confidence            45667788999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcc---cccccC-------------CCCCCccc------------CCCCCCCCCHHHHHHHHHcC--
Q psy17600         84 LSDFGLCTGLKKSHRT---DFYRDL-------------SQAKPSDF------------SYPPFCSENPQETYRKVMSW--  133 (351)
Q Consensus        84 l~DFGla~~~~~~~~~---~~~~~~-------------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~--  133 (351)
                      |+|||+|+.+......   ...+..             .+....|.            +..||.+.+.......+...  
T Consensus       170 L~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~  249 (322)
T d1vzoa_         170 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL  249 (322)
T ss_dssp             ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred             EeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc
Confidence            9999999765322111   111111             11222333            36899876654444333321  


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCC-CChHHHhcCCCCCCccCCCchhhhcCCCCCC--cccCCCCc
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIP--VQVKSIDD  206 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~-~~~~~i~~~~~h~ff~~idw~~l~~~~~~~~--~~~~~~~d  206 (351)
                      .....+|.  ..|++++++|.+ |..+|.+|++.. ..++++.   .||||++++|+.+..+..++|  |.+++..|
T Consensus       250 ~~~~~~~~--~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil---~Hpff~~i~~~~l~~~~~~~p~~p~~~~~~~  321 (322)
T d1vzoa_         250 KSEPPYPQ--EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK---EHLFFQKINWDDLAAKKVPAPFKPVIRDELD  321 (322)
T ss_dssp             HCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHH---TSGGGTTCCHHHHHTTCSCCSCCCCCCC-CC
T ss_pred             cCCCCCcc--cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHH---cCHhhcCCCHHHHHhCCCCcCCCCCCCCCCC
Confidence            12334444  379999999999 557999999875 3678888   899999999999988765554  45666655

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=5.9e-28  Score=225.27  Aligned_cols=174  Identities=25%  Similarity=0.394  Sum_probs=133.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec---CCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD---ARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~---~~~   80 (351)
                      +++.++..|++...+|||||||+||+|.+++.+.+.+++..++.++.|++.||.|||++|||||||||+|||+.   .++
T Consensus        68 nIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~  147 (307)
T d1a06a_          68 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS  147 (307)
T ss_dssp             TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC
T ss_pred             CCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCc
Confidence            45677888999999999999999999999999888999999999999999999999999999999999999995   578


Q ss_pred             cEEEEecCccccCcCCCc-ccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR-TDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~-~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+|+....... ....++..           +....|+            +.+||.+.+..+++..|......
T Consensus       148 ~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~  227 (307)
T d1a06a_         148 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE  227 (307)
T ss_dssp             CEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCC
T ss_pred             eEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC
Confidence            999999999976543221 11222222           2333333            37999999999999999986555


Q ss_pred             eeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        137 LVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +..|....+|++++++|.++ ..+|.+|.+    ++++.   .||||++
T Consensus       228 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil---~hp~~~~  269 (307)
T d1a06a_         228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQAL---QHPWIAG  269 (307)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHH---HSTTTTS
T ss_pred             CCCccccCCCHHHHHHHHHHccCCHhHCcC----HHHHh---cCHhhCC
Confidence            44454456899999999994 579999985    67787   7899985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.3e-28  Score=222.51  Aligned_cols=171  Identities=26%  Similarity=0.406  Sum_probs=133.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|||||||+||+|.+++.+ ..+++..++.++.|++.||.|||++|||||||||+|||++.+|.+|
T Consensus        78 nIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vk  156 (293)
T d1yhwa1          78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK  156 (293)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEe
Confidence            456677789999999999999999999998866 4699999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCC-Cce
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWR-DTL  137 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~-~~~  137 (351)
                      |+|||+|+.+....       .|..|..      ..+....|.            +.+||.+.+..+....+.... ..+
T Consensus       157 l~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~  236 (293)
T d1yhwa1         157 LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL  236 (293)
T ss_dssp             ECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC
T ss_pred             eccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            99999998654322       1222221      122333343            379999998887776665432 223


Q ss_pred             eCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 VFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ..|.  .+|++++++|.+ |..+|.+|++    ++++.   .||||+.
T Consensus       237 ~~~~--~~s~~~~~li~~~L~~dP~~R~s----~~eil---~Hp~~~~  275 (293)
T d1yhwa1         237 QNPE--KLSAIFRDFLNRCLDMDVEKRGS----AKELL---QHQFLKI  275 (293)
T ss_dssp             SSGG--GSCHHHHHHHHHHTCSSTTTSCC----HHHHT---TCGGGGG
T ss_pred             CCcc--cCCHHHHHHHHHHccCChhHCcC----HHHHh---cCHhhCC
Confidence            3333  479999999999 5579999985    56777   8899973

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.95  E-value=1.2e-27  Score=227.10  Aligned_cols=180  Identities=21%  Similarity=0.329  Sum_probs=142.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC--CC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA--RG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~--~~   80 (351)
                      +++.++..|++...+|||||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++|||||||||+|||++.  ++
T Consensus        84 nIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~  163 (350)
T d1koaa2          84 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN  163 (350)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSC
T ss_pred             CCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCC
Confidence            466778889999999999999999999999854 457999999999999999999999999999999999999964  57


Q ss_pred             cEEEEecCccccCcCCCcc-cccccCCCC-----------CCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHRT-DFYRDLSQA-----------KPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~~-~~~~~~~~~-----------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+|+.+...... ...++..|.           ...|+            +.+||.+.+..+++.+|......
T Consensus       164 ~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~  243 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN  243 (350)
T ss_dssp             CEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             eEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            8999999999876543221 112222222           22332            37999999999999999875433


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCchhh
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDWDHI  190 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw~~l  190 (351)
                      +..+....+|++++++|.+ |..||.+|++    ++++.   .||||+..+|...
T Consensus       244 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~eil---~hp~~~~~~~~~~  291 (350)
T d1koaa2         244 MDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQAL---EHPWLTPGNAPGR  291 (350)
T ss_dssp             SCCGGGGGCCHHHHHHHHHHCCSSGGGSCC----HHHHH---HSTTTSCTTCCSC
T ss_pred             CCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHh---cCcccCCCCCCCc
Confidence            3222223589999999999 5589999986    56777   7899998887654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-28  Score=225.94  Aligned_cols=88  Identities=34%  Similarity=0.615  Sum_probs=70.9

Q ss_pred             eEeeeEEEec--CCcEEEEEecCCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeccCCCCc
Q psy17600          5 ACLKQLRMSD--PINLYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG-----FIHRDIKPDN   73 (351)
Q Consensus         5 ~~~~~~~f~~--~~~lylVmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~-----iihrDlkp~N   73 (351)
                      ++..+..+.+  ...+|+|||||+||+|.+++.+    ...+++..++.++.|++.||.|||+++     ||||||||+|
T Consensus        65 Iv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~N  144 (269)
T d2java1          65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN  144 (269)
T ss_dssp             BCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGG
T ss_pred             EeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhh
Confidence            4445555644  5679999999999999998863    467999999999999999999999976     9999999999


Q ss_pred             EEecCCCcEEEEecCcccc
Q psy17600         74 LLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~~   92 (351)
                      ||++.++.+||+|||+|+.
T Consensus       145 Ill~~~~~vkl~DFG~a~~  163 (269)
T d2java1         145 VFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EEECTTSCEEECCHHHHHH
T ss_pred             cCcCCCCcEEEeeccceee
Confidence            9999999999999999854

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-28  Score=224.19  Aligned_cols=85  Identities=25%  Similarity=0.336  Sum_probs=77.8

Q ss_pred             eeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEe
Q psy17600          8 KQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSD   86 (351)
Q Consensus         8 ~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~D   86 (351)
                      .++.+.+...+|||||||+||+|.+++... ..+++..+..++.|++.||+|||+++||||||||+|||++.++.+||+|
T Consensus        68 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~D  147 (276)
T d1uwha_          68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGD  147 (276)
T ss_dssp             CEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECC
T ss_pred             eeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcc
Confidence            455677788899999999999999999754 5699999999999999999999999999999999999999999999999


Q ss_pred             cCcccc
Q psy17600         87 FGLCTG   92 (351)
Q Consensus        87 FGla~~   92 (351)
                      ||+|+.
T Consensus       148 FGla~~  153 (276)
T d1uwha_         148 FGLATV  153 (276)
T ss_dssp             CCCSCC
T ss_pred             ccceee
Confidence            999853

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-28  Score=230.17  Aligned_cols=89  Identities=26%  Similarity=0.458  Sum_probs=77.9

Q ss_pred             ceEeeeEEEec----CCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec
Q psy17600          4 YACLKQLRMSD----PINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD   77 (351)
Q Consensus         4 ~~~~~~~~f~~----~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~   77 (351)
                      +.+.++..|++    ...+|||||||+||+|.+++.+.  ..+++.+++.++.|++.||.|||++||+||||||+|||++
T Consensus        66 nIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~  145 (335)
T d2ozaa1          66 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT  145 (335)
T ss_dssp             TBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred             CCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccc
Confidence            34556666765    46799999999999999999864  3689999999999999999999999999999999999997


Q ss_pred             C---CCcEEEEecCcccc
Q psy17600         78 A---RGHIKLSDFGLCTG   92 (351)
Q Consensus        78 ~---~~~~kl~DFGla~~   92 (351)
                      .   .+.+||+|||+|+.
T Consensus       146 ~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1         146 SKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             CSSTTCCEEECCCTTCEE
T ss_pred             cccccccccccccceeee
Confidence            5   56799999999853

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-28  Score=229.66  Aligned_cols=90  Identities=23%  Similarity=0.318  Sum_probs=81.9

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-----------------------CCCHHHHHHHHHHHHHHHHHH
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-----------------------TLSEECTQFYIAETALAIDSI   59 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-----------------------~l~e~~~~~~~~qi~~al~~l   59 (351)
                      .+++.++..|++...+|+|||||+||+|.++|....                       .+++..+..++.|++.||.||
T Consensus       101 pnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL  180 (325)
T d1rjba_         101 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL  180 (325)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            356777888999999999999999999999997542                       478899999999999999999


Q ss_pred             HHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         60 HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        60 H~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |+++||||||||+|||++.++.+||+|||+|+.
T Consensus       181 H~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~  213 (325)
T d1rjba_         181 EFKSCVHRDLAARNVLVTHGKVVKICDFGLARD  213 (325)
T ss_dssp             HHTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred             HhCCeeeccCchhccccccCCeEEEeecccccc
Confidence            999999999999999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-26  Score=213.02  Aligned_cols=171  Identities=22%  Similarity=0.315  Sum_probs=132.2

Q ss_pred             ceEeeeEEEec----CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCCCCcEEec
Q psy17600          4 YACLKQLRMSD----PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDNLLLD   77 (351)
Q Consensus         4 ~~~~~~~~f~~----~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~--iihrDlkp~Nill~   77 (351)
                      +++..+..|++    ...+|||||||+||+|.+++.+...+++..++.++.||+.||+|||+++  ||||||||+|||++
T Consensus        69 nIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~  148 (270)
T d1t4ha_          69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT  148 (270)
T ss_dssp             TBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES
T ss_pred             CeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee
Confidence            34555556654    4568999999999999999998889999999999999999999999998  99999999999996


Q ss_pred             -CCCcEEEEecCccccCcCCCcccccccCCCCCCc----------cc------------CCCCCCCC-CHHHHHHHHHcC
Q psy17600         78 -ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS----------DF------------SYPPFCSE-NPQETYRKVMSW  133 (351)
Q Consensus        78 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~----------~~------------~~~Pf~~~-~~~~~~~~i~~~  133 (351)
                       .++.+||+|||+|+...........+++.|..|+          |.            +..||.+. +...+++.+...
T Consensus       149 ~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~  228 (270)
T d1t4ha_         149 GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG  228 (270)
T ss_dssp             STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred             CCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcC
Confidence             5789999999999865443333333344444333          22            26899764 566777888765


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCcc
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFR  183 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~  183 (351)
                      .....++.  ..+++++++|.+ |..+|++|.+    ++++.   .||||+
T Consensus       229 ~~~~~~~~--~~~~~~~~li~~~l~~dp~~R~s----~~ell---~Hp~fk  270 (270)
T d1t4ha_         229 VKPASFDK--VAIPEVKEIIEGCIRQNKDERYS----IKDLL---NHAFFQ  270 (270)
T ss_dssp             CCCGGGGG--CCCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGC
T ss_pred             CCCcccCc--cCCHHHHHHHHHHccCCHhHCcC----HHHHh---CCcccC
Confidence            44344443  378999999999 4579999985    67887   889996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=7.9e-27  Score=221.56  Aligned_cols=175  Identities=25%  Similarity=0.377  Sum_probs=137.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEec--CCC
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD--ARG   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~--~~~   80 (351)
                      +++.++..|++...+|||||||+||+|.+.+.+.+ .+++.+++.++.||+.||.|||++|||||||||+|||++  .++
T Consensus        87 nIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~  166 (352)
T d1koba_          87 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS  166 (352)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC
T ss_pred             CCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCC
Confidence            45677788999999999999999999998876544 699999999999999999999999999999999999997  568


Q ss_pred             cEEEEecCccccCcCCCc------cccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+|+.+.....      +..|..      ..+....|.            +.+||.+.+..+++..|......
T Consensus       167 ~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  246 (352)
T d1koba_         167 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE  246 (352)
T ss_dssp             CEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC
T ss_pred             eEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            999999999987654322      112221      112222332            37999999999999999875433


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      +..+....+|++++++|.+ |..+|.+|.+    ++++.   .||||++.
T Consensus       247 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~eil---~Hp~~~~~  289 (352)
T d1koba_         247 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDAL---EHPWLKGD  289 (352)
T ss_dssp             CCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---TSTTTSSC
T ss_pred             CCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHh---cCHhhCCC
Confidence            2222223589999999999 5579999986    56777   88999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.4e-27  Score=215.86  Aligned_cols=173  Identities=22%  Similarity=0.314  Sum_probs=135.6

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..|++...+|||||||+||+|.+++.+ .+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+
T Consensus        70 nIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~  149 (288)
T d2jfla1          70 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI  149 (288)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             CCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCE
Confidence            456677889999999999999999999998765 4679999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCC-------CcccccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHc
Q psy17600         83 KLSDFGLCTGLKKS-------HRTDFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMS  132 (351)
Q Consensus        83 kl~DFGla~~~~~~-------~~~~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~  132 (351)
                      ||+|||+|+.....       ..+..|..+.           +....|.            +.+||.+.++.+++.++..
T Consensus       150 Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~  229 (288)
T d2jfla1         150 KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK  229 (288)
T ss_dssp             EECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHH
T ss_pred             EEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence            99999998754321       1222232211           2222343            2699999999999888887


Q ss_pred             CCCceeCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        133 WRDTLVFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       133 ~~~~~~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      ... ..++....+|++++++|.++ ..+|.+|.+    ++++.   .||||+.
T Consensus       230 ~~~-~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~ell---~hp~~~~  274 (288)
T d2jfla1         230 SEP-PTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLL---QHPFVTV  274 (288)
T ss_dssp             SCC-CCCSSGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHT---TSGGGCC
T ss_pred             CCC-CCCCccccCCHHHHHHHHHHccCChhHCcC----HHHHh---cCcccCC
Confidence            532 12222234799999999995 579999986    56776   8899974

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.7e-27  Score=219.95  Aligned_cols=89  Identities=24%  Similarity=0.371  Sum_probs=81.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      +++..+..|.+...+|+|||||++|+|..++.+.  ..+++..+..++.|++.||.|||++|||||||||+|||++.++.
T Consensus        74 nIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~  153 (287)
T d1opja_          74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL  153 (287)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             CEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCc
Confidence            4566777889999999999999999999999764  56899999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccc
Q psy17600         82 IKLSDFGLCTG   92 (351)
Q Consensus        82 ~kl~DFGla~~   92 (351)
                      +||+|||+|+.
T Consensus       154 ~Kl~DFG~a~~  164 (287)
T d1opja_         154 VKVADFGLSRL  164 (287)
T ss_dssp             EEECCCCCTTT
T ss_pred             EEEccccceee
Confidence            99999999853

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.6e-27  Score=221.47  Aligned_cols=90  Identities=20%  Similarity=0.327  Sum_probs=78.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..+.+...+|+|||||+||+|.+++... +.+++.++..++.||+.||.|||+++||||||||+|||++.++.+
T Consensus        88 nIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~  167 (299)
T d1jpaa_          88 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVC  167 (299)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             CCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcE
Confidence            4567777888999999999999999999988764 568999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+|+.+
T Consensus       168 Kl~DFGla~~~  178 (299)
T d1jpaa_         168 KVSDFGLSRFL  178 (299)
T ss_dssp             EECCC------
T ss_pred             EECCcccceEc
Confidence            99999998643

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-27  Score=220.78  Aligned_cols=81  Identities=31%  Similarity=0.431  Sum_probs=68.2

Q ss_pred             EecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q psy17600         12 MSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL   75 (351)
Q Consensus        12 f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nil   75 (351)
                      +++...+|+|||||+||+|.+++...                ..+++.++..++.||+.||.|||+++||||||||+|||
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NIL  166 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  166 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcccee
Confidence            34456799999999999999999753                24789999999999999999999999999999999999


Q ss_pred             ecCCCcEEEEecCcccc
Q psy17600         76 LDARGHIKLSDFGLCTG   92 (351)
Q Consensus        76 l~~~~~~kl~DFGla~~   92 (351)
                      ++.++.+||+|||+|+.
T Consensus       167 l~~~~~~Kl~DFGla~~  183 (299)
T d1ywna1         167 LSEKNVVKICDFGLARD  183 (299)
T ss_dssp             ECGGGCEEECC------
T ss_pred             ECCCCcEEEccCcchhh
Confidence            99999999999999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.1e-27  Score=219.64  Aligned_cols=174  Identities=22%  Similarity=0.309  Sum_probs=136.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC--C
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR--G   80 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~--~   80 (351)
                      +++.++..|++..++|||||||+||+|.+++.+.+ .+++.+++.++.||+.||+|||++||+||||||+|||++.+  +
T Consensus        62 nIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~  141 (321)
T d1tkia_          62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS  141 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCC
T ss_pred             CCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCce
Confidence            46677788999999999999999999999997654 69999999999999999999999999999999999999854  4


Q ss_pred             cEEEEecCccccCcCCCcc-cccccCC-----------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         81 HIKLSDFGLCTGLKKSHRT-DFYRDLS-----------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~~-~~~~~~~-----------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      .+||+|||+++........ ..+.+..           +....|.            +.+||.+.+..+++.+|......
T Consensus       142 ~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~  221 (321)
T d1tkia_         142 TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT  221 (321)
T ss_dssp             CEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred             EEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            8999999999865433211 1111111           2222333            37999999999999999875432


Q ss_pred             eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        137 LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       137 ~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +..+....+|++++++|.+ |..||.+|++    ++++.   .||||+.
T Consensus       222 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~eil---~hp~~~~  263 (321)
T d1tkia_         222 FDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEAL---QHPWLKQ  263 (321)
T ss_dssp             CCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHH---HSHHHHS
T ss_pred             CChhhccCCCHHHHHHHHHHccCChhHCcC----HHHHh---cCHhhcc
Confidence            2222223489999999999 5579999995    56777   7899963

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.7e-26  Score=215.54  Aligned_cols=172  Identities=20%  Similarity=0.206  Sum_probs=137.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|+|||||.||+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||++.++.+|
T Consensus        76 nIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~K  155 (309)
T d1u5ra_          76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK  155 (309)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEE
T ss_pred             CEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEE
Confidence            46677778999999999999999999988888888899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC---cccccccCC---------CCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeC
Q psy17600         84 LSDFGLCTGLKKSH---RTDFYRDLS---------QAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVF  139 (351)
Q Consensus        84 l~DFGla~~~~~~~---~~~~~~~~~---------~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~  139 (351)
                      |+|||+|+......   .|..|..+.         +....|.            +.+||.+.+..+...++.....  ..
T Consensus       156 l~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~--~~  233 (309)
T d1u5ra_         156 LGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PA  233 (309)
T ss_dssp             ECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--CC
T ss_pred             EeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC--CC
Confidence            99999998654322   233333221         2223333            2689999999888888876432  22


Q ss_pred             CCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        140 PPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       140 p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                      +....+|++++++|.+ |..+|.+|.+    ++++.   .||||..
T Consensus       234 ~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell---~Hp~~~~  272 (309)
T d1u5ra_         234 LQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLL---KHRFVLR  272 (309)
T ss_dssp             CSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHT---TCHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHCcCChhHCcC----HHHHH---hCHHhcC
Confidence            2233579999999999 5689999986    56776   8899963

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-27  Score=213.87  Aligned_cols=89  Identities=20%  Similarity=0.243  Sum_probs=78.2

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+.+...+|+|||||++|+|.+++... ..+++..+..++.|++.||.|+|+++|+||||||+|||++.++.+
T Consensus        61 nIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~  140 (263)
T d1sm2a_          61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI  140 (263)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCE
T ss_pred             CcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCe
Confidence            4566777788899999999999999999998754 568899999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+++.
T Consensus       141 Kl~DFGla~~  150 (263)
T d1sm2a_         141 KVSDFGMTRF  150 (263)
T ss_dssp             EECSCC----
T ss_pred             Eecccchhee
Confidence            9999999753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.3e-27  Score=217.00  Aligned_cols=88  Identities=22%  Similarity=0.328  Sum_probs=79.3

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL   84 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl   84 (351)
                      ++.++..+++ +.+|||||||+||+|.+++.+...+++..+..++.||+.||.|||+++||||||||+|||++.++.+||
T Consensus        70 Iv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl  148 (277)
T d1xbba_          70 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI  148 (277)
T ss_dssp             BCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             CceEEEEecc-CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccc
Confidence            4445555554 568999999999999999999889999999999999999999999999999999999999999999999


Q ss_pred             EecCccccC
Q psy17600         85 SDFGLCTGL   93 (351)
Q Consensus        85 ~DFGla~~~   93 (351)
                      +|||+++.+
T Consensus       149 ~DFGla~~~  157 (277)
T d1xbba_         149 SDFGLSKAL  157 (277)
T ss_dssp             CCCTTCEEC
T ss_pred             cchhhhhhc
Confidence            999998643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=4.9e-27  Score=215.46  Aligned_cols=88  Identities=24%  Similarity=0.431  Sum_probs=78.3

Q ss_pred             eEeeeEEEecCC----cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          5 ACLKQLRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         5 ~~~~~~~f~~~~----~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      ++..+..+++..    .+|||||||+||+|..++...+.+++.+++.++.|++.||.|||++|||||||||+|||++.++
T Consensus        69 iv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~  148 (277)
T d1o6ya_          69 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN  148 (277)
T ss_dssp             BCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTS
T ss_pred             CCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccc
Confidence            344555555443    3899999999999999998888999999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccc
Q psy17600         81 HIKLSDFGLCTG   92 (351)
Q Consensus        81 ~~kl~DFGla~~   92 (351)
                      ..+++|||+++.
T Consensus       149 ~~~l~d~~~~~~  160 (277)
T d1o6ya_         149 AVKVMDFGIARA  160 (277)
T ss_dssp             CEEECCCTTCEE
T ss_pred             cceeehhhhhhh
Confidence            999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.5e-26  Score=213.41  Aligned_cols=88  Identities=25%  Similarity=0.408  Sum_probs=77.6

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++.++..+++ +.+|||||||+||+|.+++.. ...+++..+..++.|++.||.|||+++||||||||+|||++.++.+|
T Consensus        71 Iv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~K  149 (285)
T d1u59a_          71 IVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAK  149 (285)
T ss_dssp             BCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEE
T ss_pred             EeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCcee
Confidence            4445555654 569999999999999998764 35799999999999999999999999999999999999999999999


Q ss_pred             EEecCccccC
Q psy17600         84 LSDFGLCTGL   93 (351)
Q Consensus        84 l~DFGla~~~   93 (351)
                      |+|||+|+.+
T Consensus       150 l~DFGla~~~  159 (285)
T d1u59a_         150 ISDFGLSKAL  159 (285)
T ss_dssp             ECCCTTCEEC
T ss_pred             eccchhhhcc
Confidence            9999998644

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-26  Score=212.05  Aligned_cols=84  Identities=24%  Similarity=0.400  Sum_probs=74.4

Q ss_pred             EEEecCCcEEEEEecCCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEec
Q psy17600         10 LRMSDPINLYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDF   87 (351)
Q Consensus        10 ~~f~~~~~lylVmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DF   87 (351)
                      +.+.....+|+|||||++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        74 ~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DF  153 (272)
T d1qpca_          74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF  153 (272)
T ss_dssp             EEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccc
Confidence            3445567789999999999999877532  35899999999999999999999999999999999999999999999999


Q ss_pred             CccccC
Q psy17600         88 GLCTGL   93 (351)
Q Consensus        88 Gla~~~   93 (351)
                      |+|+.+
T Consensus       154 Gla~~~  159 (272)
T d1qpca_         154 GLARLI  159 (272)
T ss_dssp             TTCEEC
T ss_pred             cceEEc
Confidence            998643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.6e-26  Score=208.69  Aligned_cols=90  Identities=22%  Similarity=0.316  Sum_probs=79.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+.+...+|+|||||.+|++.+.+... ..+++..+..++.|++.||.|||+++||||||||+|||++.++.+
T Consensus        70 nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~  149 (283)
T d1mqba_          70 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVC  149 (283)
T ss_dssp             TBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             CEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeE
Confidence            4566777888999999999999999999988654 579999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+++.+
T Consensus       150 Kl~DFGla~~~  160 (283)
T d1mqba_         150 KVSDFGLSRVL  160 (283)
T ss_dssp             EECCCCC----
T ss_pred             EEcccchhhcc
Confidence            99999998643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.2e-25  Score=200.64  Aligned_cols=167  Identities=24%  Similarity=0.347  Sum_probs=129.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCC-Cc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPG-GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GH   81 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~g-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~-~~   81 (351)
                      .++..+..|+++..+|+||||+.+ +++.+++.+...+++..++.++.|++.||.|||++|||||||||+|||++.+ +.
T Consensus        70 nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~  149 (273)
T d1xwsa_          70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE  149 (273)
T ss_dssp             SBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE
T ss_pred             CccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCe
Confidence            366777889999999999999976 6888898888899999999999999999999999999999999999999854 79


Q ss_pred             EEEEecCccccCcCCCcccccccCCCC------------CCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         82 IKLSDFGLCTGLKKSHRTDFYRDLSQA------------KPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        82 ~kl~DFGla~~~~~~~~~~~~~~~~~~------------~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      +||+|||+|+.......+...++..+.            ...|.            +..||.+.+      .+..  ..+
T Consensus       150 vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~--~~~  221 (273)
T d1xwsa_         150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIR--GQV  221 (273)
T ss_dssp             EEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHH--CCC
T ss_pred             EEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhh--ccc
Confidence            999999999865443333322222222            22332            268887532      3333  344


Q ss_pred             eCCCCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        138 VFPPEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       138 ~~p~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      .+|..  +|++++++|.++ ..||.+|.+    ++++.   .||||+++-.
T Consensus       222 ~~~~~--~s~~~~~li~~~L~~dp~~R~s----~~eil---~hp~~~~~~~  263 (273)
T d1xwsa_         222 FFRQR--VSSECQHLIRWCLALRPSDRPT----FEEIQ---NHPWMQDVLL  263 (273)
T ss_dssp             CCSSC--CCHHHHHHHHHHTCSSGGGSCC----HHHHH---TSGGGSSCCC
T ss_pred             CCCCC--CCHHHHHHHHHHccCCHhHCcC----HHHHh---cCHhhCCCCC
Confidence            55654  899999999995 579999985    67787   8899997643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.7e-25  Score=204.87  Aligned_cols=174  Identities=21%  Similarity=0.310  Sum_probs=133.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++.++..|++..++|||||||.|+++..+......+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        61 nIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~K  140 (299)
T d1ua2a_          61 NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLK  140 (299)
T ss_dssp             TBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             CEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccc
Confidence            45677888999999999999999998887777677899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCC-------cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         84 LSDFGLCTGLKKSH-------RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        84 l~DFGla~~~~~~~-------~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      |+|||+|+......       .+..|..+       .+....|.            +.+||.+.+..+...+|....+..
T Consensus       141 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~  220 (299)
T d1ua2a_         141 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP  220 (299)
T ss_dssp             ECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             cccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCC
Confidence            99999997654322       12222221       12222333            268999999988887776421100


Q ss_pred             ------------------eCCCC------CCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 ------------------VFPPE------VPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ------------------~~p~~------~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                                        .+|..      ..+|++++|||.+ |..||.+|.+    ++++.   +||||++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s----a~e~L---~Hp~f~~  285 (299)
T d1ua2a_         221 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQAL---KMKYFSN  285 (299)
T ss_dssp             CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHH---TSGGGTS
T ss_pred             ChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC----HHHHh---CCHhhCC
Confidence                              01110      1368999999999 5689999986    66777   8899985

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.1e-25  Score=205.75  Aligned_cols=90  Identities=22%  Similarity=0.323  Sum_probs=82.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHKLGFIHR   67 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qi~~al~~lH~~~iihr   67 (351)
                      .++..+..+.+...+|+|||||.+|+|.++|....                .+++..+..++.|++.||+|||+++||||
T Consensus        80 nIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHr  159 (299)
T d1fgka_          80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR  159 (299)
T ss_dssp             TBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             eEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEee
Confidence            56677788899999999999999999999997542                48999999999999999999999999999


Q ss_pred             cCCCCcEEecCCCcEEEEecCccccC
Q psy17600         68 DIKPDNLLLDARGHIKLSDFGLCTGL   93 (351)
Q Consensus        68 Dlkp~Nill~~~~~~kl~DFGla~~~   93 (351)
                      ||||+|||++.++.+||+|||+++..
T Consensus       160 DiKp~NiLl~~~~~~kl~dfg~~~~~  185 (299)
T d1fgka_         160 DLAARNVLVTEDNVMKIADFGLARDI  185 (299)
T ss_dssp             CCSGGGEEECTTCCEEECSTTCCCCG
T ss_pred             eecccceeecCCCCeEeccchhhccc
Confidence            99999999999999999999997643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-25  Score=201.83  Aligned_cols=90  Identities=20%  Similarity=0.367  Sum_probs=81.5

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      .+++.++..+.+...+|+|||||++|+|..++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++.
T Consensus        59 pnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~  138 (258)
T d1k2pa_          59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV  138 (258)
T ss_dssp             TTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCC
T ss_pred             CceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCc
Confidence            3566777788899999999999999999998764 456899999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccc
Q psy17600         82 IKLSDFGLCTG   92 (351)
Q Consensus        82 ~kl~DFGla~~   92 (351)
                      +||+|||+++.
T Consensus       139 ~kl~DfG~a~~  149 (258)
T d1k2pa_         139 VKVSDFGLSRY  149 (258)
T ss_dssp             EEECCCSSCCB
T ss_pred             EEECcchhhee
Confidence            99999999754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.5e-25  Score=206.25  Aligned_cols=89  Identities=29%  Similarity=0.438  Sum_probs=82.2

Q ss_pred             CceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q psy17600          3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHKLGFIH   66 (351)
Q Consensus         3 ~~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qi~~al~~lH~~~iih   66 (351)
                      .+++..+..+.+...+|+|||||+||+|.++|.+.                ..+++..+..++.||+.||.|+|+++|||
T Consensus        71 pnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiH  150 (309)
T d1fvra_          71 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIH  150 (309)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccc
Confidence            35677788899999999999999999999999754                56899999999999999999999999999


Q ss_pred             ccCCCCcEEecCCCcEEEEecCccc
Q psy17600         67 RDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        67 rDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      |||||+|||++.++.+||+|||+|+
T Consensus       151 rDlkp~NIL~~~~~~~kl~DfG~a~  175 (309)
T d1fvra_         151 RDLAARNILVGENYVAKIADFGLSR  175 (309)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             cccccceEEEcCCCceEEccccccc
Confidence            9999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.1e-24  Score=198.70  Aligned_cols=175  Identities=23%  Similarity=0.334  Sum_probs=127.9

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..|++..++|+|||||.++.+...... ...+++..++.++.|++.||+|||++|||||||||+|||++.++.+
T Consensus        62 ~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~  141 (298)
T d1gz8a_          62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI  141 (298)
T ss_dssp             TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred             cEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcc
Confidence            456678889999999999999976544443333 4569999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCCc--ccccccCCC------------CCCccc------------CCCCCCCCCHHHHHHHHHcCCCc
Q psy17600         83 KLSDFGLCTGLKKSHR--TDFYRDLSQ------------AKPSDF------------SYPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        83 kl~DFGla~~~~~~~~--~~~~~~~~~------------~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      ||+|||+|+.......  ....++..+            ....|.            +..||.+.+..+...++......
T Consensus       142 kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~  221 (298)
T d1gz8a_         142 KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT  221 (298)
T ss_dssp             EECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             eeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9999999975433221  111112111            222332            37999999887776665431110


Q ss_pred             ---e-------------eCCC---------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        137 ---L-------------VFPP---------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       137 ---~-------------~~p~---------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                         .             .+|.         ..++|++++|+|.+ |..||.+|.+    ++++.   .||||+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t----~~ell---~H~ff~~~  289 (298)
T d1gz8a_         222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AKAAL---AHPFFQDV  289 (298)
T ss_dssp             CCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCC----HHHHH---TSGGGTTC
T ss_pred             CchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcC----HHHHh---CCHhhccC
Confidence               0             0111         12468999999999 5579999985    66777   88999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.1e-25  Score=204.10  Aligned_cols=87  Identities=25%  Similarity=0.382  Sum_probs=71.9

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      ++.++..++ ...+|+|||||++|+|..++.. ...+++..+..++.|++.||.|||+++||||||||+||+++.++.+|
T Consensus        70 Iv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~K  148 (273)
T d1mp8a_          70 IVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK  148 (273)
T ss_dssp             BCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEE
T ss_pred             EeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEE
Confidence            344445554 5789999999999999998765 45789999999999999999999999999999999999999999999


Q ss_pred             EEecCcccc
Q psy17600         84 LSDFGLCTG   92 (351)
Q Consensus        84 l~DFGla~~   92 (351)
                      |+|||+|+.
T Consensus       149 l~DfG~a~~  157 (273)
T d1mp8a_         149 LGDFGLSRY  157 (273)
T ss_dssp             ECC------
T ss_pred             Eccchhhee
Confidence            999999853

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=1.6e-24  Score=200.28  Aligned_cols=88  Identities=24%  Similarity=0.322  Sum_probs=77.5

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC-----
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-----   78 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~-----   78 (351)
                      .+..+..+++....|+||||| ||+|.+++... ..+++..+..++.|++.||+|||++|||||||||+|||++.     
T Consensus        63 i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~  141 (293)
T d1csna_          63 IPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKN  141 (293)
T ss_dssp             CCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTT
T ss_pred             CCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCccccc
Confidence            345566788899999999999 78999988765 46899999999999999999999999999999999999974     


Q ss_pred             CCcEEEEecCccccC
Q psy17600         79 RGHIKLSDFGLCTGL   93 (351)
Q Consensus        79 ~~~~kl~DFGla~~~   93 (351)
                      ++.+||+|||+|+..
T Consensus       142 ~~~vkl~DFG~a~~~  156 (293)
T d1csna_         142 ANMIYVVDFGMVKFY  156 (293)
T ss_dssp             TTCEEECCCTTCEES
T ss_pred             CCceEEcccceeEEc
Confidence            578999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=4.1e-25  Score=205.01  Aligned_cols=89  Identities=21%  Similarity=0.285  Sum_probs=79.8

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC------------------------CCCHHHHHHHHHHHHHHHHHH
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD------------------------TLSEECTQFYIAETALAIDSI   59 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~------------------------~l~e~~~~~~~~qi~~al~~l   59 (351)
                      ..+..+..+.+...+|+|||||++|+|.+++....                        .+++..+..++.|++.||+||
T Consensus        77 niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yl  156 (301)
T d1lufa_          77 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  156 (301)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhc
Confidence            34566777889999999999999999999996532                        378889999999999999999


Q ss_pred             HHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         60 HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        60 H~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      |+++||||||||+|||++.++.+||+|||+|+.
T Consensus       157 H~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~  189 (301)
T d1lufa_         157 SERKFVHRDLATRNCLVGENMVVKIADFGLSRN  189 (301)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSCHHH
T ss_pred             ccCCeEeeEEcccceEECCCCcEEEccchhhee
Confidence            999999999999999999999999999999753

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.5e-25  Score=204.21  Aligned_cols=89  Identities=24%  Similarity=0.250  Sum_probs=81.3

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKD------------------TLSEECTQFYIAETALAIDSIHKLGFI   65 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~------------------~l~e~~~~~~~~qi~~al~~lH~~~ii   65 (351)
                      .++..+..+++...+|+|||||+||+|.+++.+..                  .+++..+..++.||+.|+.|||++++|
T Consensus        88 nIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~iv  167 (311)
T d1t46a_          88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI  167 (311)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45667778899999999999999999999997543                  588999999999999999999999999


Q ss_pred             eccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         66 HRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        66 hrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ||||||+||+++.++.+|++|||+++.
T Consensus       168 HrDLKp~NIl~~~~~~~ki~DfG~~~~  194 (311)
T d1t46a_         168 HRDLAARNILLTHGRITKICDFGLARD  194 (311)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSC
T ss_pred             ecccccccccccccCcccccccchhee
Confidence            999999999999999999999999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.1e-25  Score=201.40  Aligned_cols=87  Identities=21%  Similarity=0.357  Sum_probs=75.7

Q ss_pred             eEeeeEEEecCCcEEEEEecCCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          5 ACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK--KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         5 ~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      ++..+..++ .+.+|+|||||++|+|..++..  ...+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        74 Iv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~  152 (285)
T d1fmka3          74 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC  152 (285)
T ss_dssp             BCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             EeEEEEEEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcE
Confidence            444555554 4668999999999999988753  3569999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+|+.
T Consensus       153 kl~DfGla~~  162 (285)
T d1fmka3         153 KVADFGLARL  162 (285)
T ss_dssp             EECCCCTTC-
T ss_pred             EEcccchhhh
Confidence            9999999753

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-24  Score=202.67  Aligned_cols=88  Identities=20%  Similarity=0.381  Sum_probs=77.0

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++.++..+.+ ...|++|||+.+|+|.+.+... ..+++..+..++.||+.||.|||+++||||||||+|||++.++++
T Consensus        72 nIv~l~g~~~~-~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~  150 (317)
T d1xkka_          72 HVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV  150 (317)
T ss_dssp             TBCCEEEEEES-SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEE
T ss_pred             CEeeEEEEEec-CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCe
Confidence            34555555655 5688999999999999888754 578999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccc
Q psy17600         83 KLSDFGLCTG   92 (351)
Q Consensus        83 kl~DFGla~~   92 (351)
                      ||+|||+|+.
T Consensus       151 kl~DFGla~~  160 (317)
T d1xkka_         151 KITDFGLAKL  160 (317)
T ss_dssp             EECCCSHHHH
T ss_pred             Eeecccccee
Confidence            9999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=3.6e-24  Score=198.06  Aligned_cols=86  Identities=26%  Similarity=0.378  Sum_probs=72.1

Q ss_pred             eeeEEEecCCcEEEEEecCCCCCHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC---CCcE
Q psy17600          7 LKQLRMSDPINLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA---RGHI   82 (351)
Q Consensus         7 ~~~~~f~~~~~lylVmEy~~gg~L~~~l-~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~---~~~~   82 (351)
                      .....+.+....|+|||||. |+|...+ .....+++..+..++.|++.||+|||++|||||||||+|||++.   +..+
T Consensus        67 ~~~~~~~~~~~~~ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~v  145 (299)
T d1ckia_          67 TIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV  145 (299)
T ss_dssp             CEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCE
T ss_pred             EEEEEEecCCEEEEEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCcee
Confidence            34556778889999999995 5555555 44568999999999999999999999999999999999999753   4579


Q ss_pred             EEEecCccccC
Q psy17600         83 KLSDFGLCTGL   93 (351)
Q Consensus        83 kl~DFGla~~~   93 (351)
                      ||+|||+|+.+
T Consensus       146 kl~DFG~a~~~  156 (299)
T d1ckia_         146 YIIDFGLAKKY  156 (299)
T ss_dssp             EECCCSSCEEC
T ss_pred             eeeccCcceec
Confidence            99999998754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=1.1e-23  Score=193.66  Aligned_cols=174  Identities=20%  Similarity=0.281  Sum_probs=131.1

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +++..+..|++...+|++|||+.++.+..+....+.+++..++.++.|++.||+|||++|||||||||+|||++.++.+|
T Consensus        61 nIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~k  140 (286)
T d1ob3a_          61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELK  140 (286)
T ss_dssp             TBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             cEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEE
Confidence            45677888999999999999999888888877778899999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCc-------cccccc-------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         84 LSDFGLCTGLKKSHR-------TDFYRD-------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        84 l~DFGla~~~~~~~~-------~~~~~~-------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      ++|||+|........       +..|..       ..+....|.            +.+||.+.+..+...++....+..
T Consensus       141 l~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~  220 (286)
T d1ob3a_         141 IADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP  220 (286)
T ss_dssp             ECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCC
Confidence            999999875432211       111111       112223332            379999998888776654311110


Q ss_pred             ---------e-------CC---------CCCCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        138 ---------V-------FP---------PEVPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       138 ---------~-------~p---------~~~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                               .       ++         ....+|++++|+|.++ ..||++|.+    ++++.   .||||++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s----~~ell---~Hp~f~~  286 (286)
T d1ob3a_         221 NSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQAL---EHAYFKE  286 (286)
T ss_dssp             CTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHH---TSGGGGC
T ss_pred             ChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcC----HHHHh---cCcccCc
Confidence                     0       00         0123689999999994 579999986    56777   8899974

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.89  E-value=1.1e-23  Score=197.17  Aligned_cols=175  Identities=21%  Similarity=0.304  Sum_probs=121.6

Q ss_pred             ceEeeeEEEe--cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-
Q psy17600          4 YACLKQLRMS--DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-   80 (351)
Q Consensus         4 ~~~~~~~~f~--~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-   80 (351)
                      +++..+..|+  +...+|+|||||.+|+|..+.   +.+++..++.++.||+.||.|||++|||||||||+|||++.++ 
T Consensus        91 nIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~  167 (328)
T d3bqca1          91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR  167 (328)
T ss_dssp             TBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             CCcEEEEEEEecCCCceeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCC
Confidence            3444555666  446799999999999997764   5699999999999999999999999999999999999998765 


Q ss_pred             cEEEEecCccccCcCCCc------ccccccC-------CCCCCccc------------CCCCCCCCC-HHHHHHHHHcC-
Q psy17600         81 HIKLSDFGLCTGLKKSHR------TDFYRDL-------SQAKPSDF------------SYPPFCSEN-PQETYRKVMSW-  133 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~------~~~~~~~-------~~~~~~~~------------~~~Pf~~~~-~~~~~~~i~~~-  133 (351)
                      .+||+|||+|+.......      +..|..+       .+....|.            +..||...+ .......+... 
T Consensus       168 ~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~  247 (328)
T d3bqca1         168 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL  247 (328)
T ss_dssp             EEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred             eeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHH
Confidence            689999999976543221      2222221       12222332            257776543 33222222110 


Q ss_pred             --------------CCc------------------eeCCCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCC
Q psy17600        134 --------------RDT------------------LVFPPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQ  180 (351)
Q Consensus       134 --------------~~~------------------~~~p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~  180 (351)
                                    ...                  ...+....+|++++|||.+ |..||.+|++    ++++.   .||
T Consensus       248 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~e~L---~Hp  320 (328)
T d3bqca1         248 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----AREAM---EHP  320 (328)
T ss_dssp             CHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSG
T ss_pred             CCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcC----HHHHh---cCc
Confidence                          000                  0001112378999999999 5579999996    67887   899


Q ss_pred             CccCCCch
Q psy17600        181 FFRGVDWD  188 (351)
Q Consensus       181 ff~~idw~  188 (351)
                      ||+++.|+
T Consensus       321 ~F~~v~~~  328 (328)
T d3bqca1         321 YFYTVVKD  328 (328)
T ss_dssp             GGTTSCCC
T ss_pred             ccCCCCCC
Confidence            99999996

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.7e-24  Score=199.80  Aligned_cols=76  Identities=25%  Similarity=0.431  Sum_probs=70.3

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeeccCCCCcEEecCCCcEEEEecC
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK--------LGFIHRDIKPDNLLLDARGHIKLSDFG   88 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~--------~~iihrDlkp~Nill~~~~~~kl~DFG   88 (351)
                      .+|+|||||++|+|..++.+. .+++.....++.|++.||.|+|+        +|||||||||+|||++.++.+||+|||
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG  153 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecC
Confidence            689999999999999999775 68899999999999999999996        599999999999999999999999999


Q ss_pred             ccccC
Q psy17600         89 LCTGL   93 (351)
Q Consensus        89 la~~~   93 (351)
                      +++..
T Consensus       154 l~~~~  158 (303)
T d1vjya_         154 LAVRH  158 (303)
T ss_dssp             TCEEE
T ss_pred             ccccc
Confidence            98643

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7e-23  Score=189.61  Aligned_cols=167  Identities=22%  Similarity=0.334  Sum_probs=124.4

Q ss_pred             cCCcEEEEEecCCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         14 DPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      ....+|++||||.+|.+..... ....+++..++.++.|++.||+|||++|||||||||+|||++.++.+||+|||+++.
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  165 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence            3457999999999887765544 345689999999999999999999999999999999999999999999999999875


Q ss_pred             CcCCC------ccccccc------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCc---eeCC-----
Q psy17600         93 LKKSH------RTDFYRD------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDT---LVFP-----  140 (351)
Q Consensus        93 ~~~~~------~~~~~~~------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~---~~~p-----  140 (351)
                      .....      .|..|..      ..+....|+            +.+||.+.+..+...+|......   ..+|     
T Consensus       166 ~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (305)
T d1blxa_         166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  245 (305)
T ss_dssp             CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred             hcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccc
Confidence            43222      1222222      122333333            27999999998888777542110   0010     


Q ss_pred             ---------------CCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        141 ---------------PEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       141 ---------------~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                                     ....+|++++|||.+ |..||.+|.+    ++++.   .||||+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~s----a~e~L---~Hpff~~i~~  301 (305)
T d1blxa_         246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSAL---SHPYFQDLER  301 (305)
T ss_dssp             CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHH---TSGGGTTCCC
T ss_pred             hhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHh---cChhhcCchh
Confidence                           012378999999999 5579999986    56777   8999999876

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.1e-24  Score=195.44  Aligned_cols=87  Identities=23%  Similarity=0.452  Sum_probs=74.0

Q ss_pred             eEeeeEEE-ecCCcEEEEEecCCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCc
Q psy17600          5 ACLKQLRM-SDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGH   81 (351)
Q Consensus         5 ~~~~~~~f-~~~~~lylVmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~   81 (351)
                      ++..+..+ ++...+|+|||||++|+|.+++.+..  .+++..+..++.||+.||.|||+++|+||||||+||+++.++.
T Consensus        62 Iv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~  141 (262)
T d1byga_          62 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV  141 (262)
T ss_dssp             BCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC
T ss_pred             EeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCC
Confidence            44455444 45677999999999999999996543  4899999999999999999999999999999999999999999


Q ss_pred             EEEEecCccc
Q psy17600         82 IKLSDFGLCT   91 (351)
Q Consensus        82 ~kl~DFGla~   91 (351)
                      +|++|||+++
T Consensus       142 ~kl~dfg~s~  151 (262)
T d1byga_         142 AKVSDFGLTK  151 (262)
T ss_dssp             EEECCCCC--
T ss_pred             Eeecccccce
Confidence            9999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.9e-23  Score=194.22  Aligned_cols=165  Identities=27%  Similarity=0.398  Sum_probs=118.6

Q ss_pred             cCCcEEEEEecCCCCCHHHH---HHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC-cEEEEecCc
Q psy17600         14 DPINLYLIMEFLPGGDMMTL---LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG-HIKLSDFGL   89 (351)
Q Consensus        14 ~~~~lylVmEy~~gg~L~~~---l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~-~~kl~DFGl   89 (351)
                      +...+|||||||++|.+..+   ......+++.+++.++.|++.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus        90 ~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~  169 (350)
T d1q5ka_          90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS  169 (350)
T ss_dssp             SCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred             CceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccc
Confidence            44568999999987644333   23456799999999999999999999999999999999999999875 899999999


Q ss_pred             cccCcCCCc------ccccc-------cCCCCCCccc------------CCCCCCCCCHHHHHHHHHcCC----------
Q psy17600         90 CTGLKKSHR------TDFYR-------DLSQAKPSDF------------SYPPFCSENPQETYRKVMSWR----------  134 (351)
Q Consensus        90 a~~~~~~~~------~~~~~-------~~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~----------  134 (351)
                      ++.+.....      +..|.       ...+....|.            +.+||.+.+..+.+..|....          
T Consensus       170 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             CEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             hhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence            986543221      11111       1122333333            279999988877776664311          


Q ss_pred             -----CceeCCC----------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        135 -----DTLVFPP----------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       135 -----~~~~~p~----------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                           ....+|.          ....|+++.|||.+ |..||.+|++    +.++.   .||||+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L---~Hp~f~~~  309 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEAC---AHSFFDEL  309 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGGGG
T ss_pred             hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC----HHHHh---cCHhhccc
Confidence                 1111221          12368999999999 5579999986    56777   88999754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.2e-23  Score=194.31  Aligned_cols=88  Identities=17%  Similarity=0.290  Sum_probs=75.9

Q ss_pred             EeeeEE-EecCCcEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          6 CLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         6 ~~~~~~-f~~~~~lylVmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +..+.. ++.+..+|+|||||++|+|.+++... ..+++..+..++.|++.||.|+|+.+|+||||||+|||++.++.+|
T Consensus        91 v~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~k  170 (311)
T d1r0pa_          91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVK  170 (311)
T ss_dssp             CCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEE
T ss_pred             eEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEE
Confidence            334444 34567899999999999999988754 3567888889999999999999999999999999999999999999


Q ss_pred             EEecCccccC
Q psy17600         84 LSDFGLCTGL   93 (351)
Q Consensus        84 l~DFGla~~~   93 (351)
                      |+|||+++.+
T Consensus       171 L~DFG~~~~~  180 (311)
T d1r0pa_         171 VADFGLARDM  180 (311)
T ss_dssp             ECSSGGGCCT
T ss_pred             Eecccchhhc
Confidence            9999998643

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.2e-23  Score=196.78  Aligned_cols=74  Identities=34%  Similarity=0.645  Sum_probs=66.6

Q ss_pred             cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCcccc
Q psy17600         17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        17 ~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~   92 (351)
                      .+|+ |||+.||+|.+++.. ..+++..++.++.|++.||+|||++|||||||||+|||++.++.+||+|||+|+.
T Consensus        85 ~~~l-~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_          85 DVYL-VTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             CEEE-EEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEE-EEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence            3455 456779999999976 4699999999999999999999999999999999999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.7e-22  Score=185.39  Aligned_cols=175  Identities=19%  Similarity=0.284  Sum_probs=131.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIK   83 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~k   83 (351)
                      +.+..+..|.+...+|+|||++.|++|..++...+.+++..++.++.|++.||+|||++|||||||||+|||++.++.+|
T Consensus        62 niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~k  141 (292)
T d1unla_          62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK  141 (292)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCcee
Confidence            45566778999999999999999999999998888999999999999999999999999999999999999999999999


Q ss_pred             EEecCccccCcCCCcc-------ccccc-------CCCCCCcccC-------------CCCCCCCCHHHHHHHHHcCCCc
Q psy17600         84 LSDFGLCTGLKKSHRT-------DFYRD-------LSQAKPSDFS-------------YPPFCSENPQETYRKVMSWRDT  136 (351)
Q Consensus        84 l~DFGla~~~~~~~~~-------~~~~~-------~~~~~~~~~~-------------~~Pf~~~~~~~~~~~i~~~~~~  136 (351)
                      |+|||.|+........       ..+..       ..+....|.|             .|+|.+.+..+.+.++......
T Consensus       142 l~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~  221 (292)
T d1unla_         142 LANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT  221 (292)
T ss_dssp             ECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCC
T ss_pred             eeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCC
Confidence            9999999865432211       11111       1122233322             3557777877777765432111


Q ss_pred             ee---------C----------------CCCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        137 LV---------F----------------PPEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       137 ~~---------~----------------p~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      ..         .                .....+|++++|||.+ |..||.+|++    ++++.   .||||+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~s----a~e~L---~Hp~f~~~  289 (292)
T d1unla_         222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEAL---QHPYFSDF  289 (292)
T ss_dssp             CCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHT---TSGGGSSC
T ss_pred             CChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcC----HHHHh---cChhhcCC
Confidence            00         0                0112368899999999 5579999986    56777   88999863

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-23  Score=195.37  Aligned_cols=89  Identities=21%  Similarity=0.248  Sum_probs=79.4

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN   73 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~~----------~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~N   73 (351)
                      .++..+..+.....+|+|||||++|+|.+++...          ..+++..+..++.|++.||.|||+++|+||||||+|
T Consensus        84 nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~N  163 (308)
T d1p4oa_          84 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN  163 (308)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred             CEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCc
Confidence            4566677788899999999999999999988642          246888899999999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCcccc
Q psy17600         74 LLLDARGHIKLSDFGLCTG   92 (351)
Q Consensus        74 ill~~~~~~kl~DFGla~~   92 (351)
                      ||++.++++||+|||+|+.
T Consensus       164 iLld~~~~~Kl~DFGla~~  182 (308)
T d1p4oa_         164 CMVAEDFTVKIGDFGMTRD  182 (308)
T ss_dssp             EEECTTCCEEECCTTCCCG
T ss_pred             eeecCCceEEEeeccccee
Confidence            9999999999999999854

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-21  Score=183.77  Aligned_cols=175  Identities=23%  Similarity=0.364  Sum_probs=125.8

Q ss_pred             eEeeeEEEecCC------cEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          5 ACLKQLRMSDPI------NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         5 ~~~~~~~f~~~~------~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      .+.++..|.+..      .+|+||||| |++|..++.. ..+++..++.++.|++.||.|||++|||||||||+|||++.
T Consensus        79 iv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~  156 (346)
T d1cm8a_          79 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE  156 (346)
T ss_dssp             BCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             eeEEEEEeccCccccccceEEEEEecc-cccHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccc
Confidence            344555666544      579999999 6677776654 67999999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCccccCcCCC----cccccccC-------CCCCCccc------------CCCCCCCCCHHHHHHHHHcCCC
Q psy17600         79 RGHIKLSDFGLCTGLKKSH----RTDFYRDL-------SQAKPSDF------------SYPPFCSENPQETYRKVMSWRD  135 (351)
Q Consensus        79 ~~~~kl~DFGla~~~~~~~----~~~~~~~~-------~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~  135 (351)
                      ++.+|++|||+|+......    .+..|..+       .+....|.            +.+||.+.+.......+.....
T Consensus       157 ~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~  236 (346)
T d1cm8a_         157 DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG  236 (346)
T ss_dssp             TCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             ccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccC
Confidence            9999999999998654322    12222221       12233333            3789998887766554433111


Q ss_pred             ce--------------------------eCC-CCCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCCCc
Q psy17600        136 TL--------------------------VFP-PEVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGVDW  187 (351)
Q Consensus       136 ~~--------------------------~~p-~~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~idw  187 (351)
                      ..                          .++ ....+|++++|||.+ |..||.+|.+    ++++.   .||||+++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~eiL---~Hp~f~~~~~  309 (346)
T d1cm8a_         237 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEAL---AHPYFESLHD  309 (346)
T ss_dssp             CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHHH---HSGGGTTTC-
T ss_pred             CCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcC----HHHHh---cChhhCcCCC
Confidence            10                          000 012478999999999 5579999986    56777   7899998875


Q ss_pred             h
Q psy17600        188 D  188 (351)
Q Consensus       188 ~  188 (351)
                      .
T Consensus       310 ~  310 (346)
T d1cm8a_         310 T  310 (346)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.6e-21  Score=181.57  Aligned_cols=163  Identities=19%  Similarity=0.244  Sum_probs=119.0

Q ss_pred             CCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        15 ~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      ...+|+|||||.++.+.........+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence            45799999999988877666666789999999999999999999999999999999999999999999999999997543


Q ss_pred             CCC-----------ccccccc-------CCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCceeCCC---
Q psy17600         95 KSH-----------RTDFYRD-------LSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPP---  141 (351)
Q Consensus        95 ~~~-----------~~~~~~~-------~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~~~p~---  141 (351)
                      ...           .|..|..       ..+....|.            +.+||.+.+.......+........-..   
T Consensus       169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (318)
T d3blha1         169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN  248 (318)
T ss_dssp             C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccc
Confidence            211           1222221       122333343            3799999888877766554221111000   


Q ss_pred             --------------C-----------CCCCHHHHHHHHHH-hcCccccCCCCCChHHHhcCCCCCCccC
Q psy17600        142 --------------E-----------VPISEEARETIVRF-CSECDRRLGSARGVEELKSLGACQFFRG  184 (351)
Q Consensus       142 --------------~-----------~~~s~~~~dli~~l-~~~~~~rlg~~~~~~~i~~~~~h~ff~~  184 (351)
                                    .           ...+++++|||.++ ..||++|++    ++++.   .||||+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~s----a~elL---~Hpff~~  310 (318)
T d3blha1         249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDAL---NHDFFWS  310 (318)
T ss_dssp             CCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCC----HHHHH---HSGGGSS
T ss_pred             cchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHH---cChhhcc
Confidence                          0           01377899999995 479999996    66777   8899974

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=9.4e-22  Score=185.20  Aligned_cols=172  Identities=20%  Similarity=0.311  Sum_probs=121.7

Q ss_pred             EeeeEEEecC-----CcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCC
Q psy17600          6 CLKQLRMSDP-----INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARG   80 (351)
Q Consensus         6 ~~~~~~f~~~-----~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~   80 (351)
                      +..+..|+..     ...+++|||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|
T Consensus        80 v~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~  158 (348)
T d2gfsa1          80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC  158 (348)
T ss_dssp             CCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             eeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccc
Confidence            3444555532     344667788889999998854 5799999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccCcCCCcc----cccc-------cCCCCCCccc------------CCCCCCCCCHHHHHHHHHcCCCce
Q psy17600         81 HIKLSDFGLCTGLKKSHRT----DFYR-------DLSQAKPSDF------------SYPPFCSENPQETYRKVMSWRDTL  137 (351)
Q Consensus        81 ~~kl~DFGla~~~~~~~~~----~~~~-------~~~~~~~~~~------------~~~Pf~~~~~~~~~~~i~~~~~~~  137 (351)
                      .+|++|||++........+    ..|.       ...+....|.            +.+||.+.+.......|.......
T Consensus       159 ~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~  238 (348)
T d2gfsa1         159 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP  238 (348)
T ss_dssp             CEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             cccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9999999998755432211    1111       1122333343            379999998888777765432211


Q ss_pred             e---------------------CCC------CCCCCHHHHHHHHH-HhcCccccCCCCCChHHHhcCCCCCCccCC
Q psy17600        138 V---------------------FPP------EVPISEEARETIVR-FCSECDRRLGSARGVEELKSLGACQFFRGV  185 (351)
Q Consensus       138 ~---------------------~p~------~~~~s~~~~dli~~-l~~~~~~rlg~~~~~~~i~~~~~h~ff~~i  185 (351)
                      .                     .+.      ...+|++++|||.+ |..||.+|.+    ++++.   .||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~elL---~Hp~f~~~  307 (348)
T d2gfsa1         239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQAL---AHAYFAQY  307 (348)
T ss_dssp             CHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHH---TSGGGTTT
T ss_pred             ChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcC----HHHHh---cCHhhCCC
Confidence            0                     000      12478999999999 5579999986    66777   88999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.5e-22  Score=188.46  Aligned_cols=84  Identities=25%  Similarity=0.475  Sum_probs=70.0

Q ss_pred             eEeeeEEEe------cCCcEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecC
Q psy17600          5 ACLKQLRMS------DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA   78 (351)
Q Consensus         5 ~~~~~~~f~------~~~~lylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~   78 (351)
                      ++..+..|.      +...+|+|||||.|+.+ +.+  ...+++..++.++.|++.||.|||++||+||||||+|||++.
T Consensus        78 Iv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~-~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~  154 (355)
T d2b1pa1          78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLC-QVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS  154 (355)
T ss_dssp             BCCCSEEECSCCSTTTCCEEEEEEECCSEEHH-HHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             eeEEEEEEecccccccCceeEEEEeccchHHH-Hhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccc
Confidence            344455564      44789999999976544 444  356999999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCccc
Q psy17600         79 RGHIKLSDFGLCT   91 (351)
Q Consensus        79 ~~~~kl~DFGla~   91 (351)
                      ++.+|++|||+++
T Consensus       155 ~~~~kl~df~~~~  167 (355)
T d2b1pa1         155 DCTLKILDFGLAR  167 (355)
T ss_dssp             TCCEEECCCCC--
T ss_pred             ccceeeechhhhh
Confidence            9999999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2e-20  Score=170.79  Aligned_cols=159  Identities=20%  Similarity=0.277  Sum_probs=121.5

Q ss_pred             ceEeeeEEEecCCcEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcE
Q psy17600          4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHI   82 (351)
Q Consensus         4 ~~~~~~~~f~~~~~lylVmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~   82 (351)
                      +++..+..+.+ ..+|+|||||++|+|.+.+.. .+.+++..+..++.|++.||.|||+++|+||||||+||+++.++.+
T Consensus        72 nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~v  150 (273)
T d1u46a_          72 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV  150 (273)
T ss_dssp             TBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE
T ss_pred             CEEEEEEEEee-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccce
Confidence            34555666765 578999999999999987764 4579999999999999999999999999999999999999999999


Q ss_pred             EEEecCccccCcCCCccc----c-cccCCCCC-----------Ccc-------------cCCCCCCCCCHHHHHHHHHcC
Q psy17600         83 KLSDFGLCTGLKKSHRTD----F-YRDLSQAK-----------PSD-------------FSYPPFCSENPQETYRKVMSW  133 (351)
Q Consensus        83 kl~DFGla~~~~~~~~~~----~-~~~~~~~~-----------~~~-------------~~~~Pf~~~~~~~~~~~i~~~  133 (351)
                      ||+|||+++.+.......    . .+...+..           ..|             ++.+||.+.+..++..+|...
T Consensus       151 kl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~  230 (273)
T d1u46a_         151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE  230 (273)
T ss_dssp             EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred             eeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhC
Confidence            999999998654332110    0 01111111           112             137999999999999999875


Q ss_pred             CCceeCCCCCCCCHHHHHHHHH-HhcCccccCC
Q psy17600        134 RDTLVFPPEVPISEEARETIVR-FCSECDRRLG  165 (351)
Q Consensus       134 ~~~~~~p~~~~~s~~~~dli~~-l~~~~~~rlg  165 (351)
                      ...+..|  ..++++++++|.+ +..+|++|..
T Consensus       231 ~~~~~~~--~~~~~~l~~li~~cl~~dp~~RPt  261 (273)
T d1u46a_         231 GERLPRP--EDCPQDIYNVMVQCWAHKPEDRPT  261 (273)
T ss_dssp             CCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCc--ccccHHHHHHHHHHcCCChhHCcC
Confidence            4333333  3578999999999 5579999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=9.7e-19  Score=164.84  Aligned_cols=83  Identities=25%  Similarity=0.436  Sum_probs=67.2

Q ss_pred             eEEEecCCcEEEEEecCCCCCHHHHH-H--hCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEEecCCCc---
Q psy17600          9 QLRMSDPINLYLIMEFLPGGDMMTLL-M--KKDTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGH---   81 (351)
Q Consensus         9 ~~~f~~~~~lylVmEy~~gg~L~~~l-~--~~~~l~e~~~~~~~~qi~~al~~lH~-~~iihrDlkp~Nill~~~~~---   81 (351)
                      ...+++....+++|+++.+++..... .  ....+++..++.++.|++.||.|||+ .||+||||||+|||++.++.   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          88 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             EeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccc
Confidence            44566778888999888766543332 2  34578999999999999999999998 89999999999999986653   


Q ss_pred             ---EEEEecCccc
Q psy17600         82 ---IKLSDFGLCT   91 (351)
Q Consensus        82 ---~kl~DFGla~   91 (351)
                         ++++|||.+.
T Consensus       168 ~~~~kl~dfg~s~  180 (362)
T d1q8ya_         168 LIQIKIADLGNAC  180 (362)
T ss_dssp             EEEEEECCCTTCE
T ss_pred             cceeeEeeccccc
Confidence               8999999864

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.38  E-value=8e-14  Score=119.40  Aligned_cols=68  Identities=16%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             EEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEecCCCcEEEEecCccccCc
Q psy17600         19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLK   94 (351)
Q Consensus        19 ylVmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~iihrDlkp~Nill~~~~~~kl~DFGla~~~~   94 (351)
                      +++|||+.++.+..       +++..+..++.|++.|+.|||++||+||||||+|||++.+ .++|+|||+|....
T Consensus        86 ~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2          86 AVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             EEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             EEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccCC
Confidence            69999999876532       4555667889999999999999999999999999999865 48999999987654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.7e-07  Score=86.40  Aligned_cols=43  Identities=51%  Similarity=1.047  Sum_probs=38.4

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+||+.|+|||++.+..|+.++|+||+||++|+|+.+.-+|
T Consensus       163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf  205 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCC
Confidence            3568999999999999999999999999999999999876555

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=7.8e-08  Score=86.81  Aligned_cols=44  Identities=32%  Similarity=0.667  Sum_probs=38.3

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  211 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR  211 (288)
T ss_dssp             --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCC
Confidence            35689999999999998889999999999999999998877763

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.17  E-value=1.6e-07  Score=85.73  Aligned_cols=43  Identities=49%  Similarity=0.995  Sum_probs=39.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.+..++.++|+||+||++|+|+.+..+|.
T Consensus       160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~  202 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY  202 (316)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCC
Confidence            4689999999999998889999999999999999999888774

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.2e-07  Score=84.41  Aligned_cols=43  Identities=37%  Similarity=0.653  Sum_probs=38.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  205 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE  205 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCC
Confidence            4579999999999999889999999999999999999877764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.14  E-value=1.4e-07  Score=85.93  Aligned_cols=43  Identities=47%  Similarity=0.837  Sum_probs=35.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  210 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY  210 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCC
Confidence            4579999999999999899999999999999999998887763

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=2.1e-07  Score=84.19  Aligned_cols=44  Identities=43%  Similarity=0.844  Sum_probs=39.4

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~  217 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL  217 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCC
Confidence            35589999999999999889999999999999999998877774

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=2.2e-07  Score=83.90  Aligned_cols=44  Identities=43%  Similarity=0.620  Sum_probs=39.3

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       173 ~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~  216 (305)
T d1blxa_         173 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  216 (305)
T ss_dssp             CCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCC
Confidence            35689999999999999999999999999999999998876663

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=3.4e-07  Score=81.68  Aligned_cols=42  Identities=29%  Similarity=0.665  Sum_probs=36.9

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.+ .++.++|+||+||++|+|+.+.-+|.
T Consensus       172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~  213 (270)
T d1t4ha_         172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  213 (270)
T ss_dssp             ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCC
Confidence            5689999999998865 58999999999999999998877764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=2.3e-07  Score=85.96  Aligned_cols=43  Identities=47%  Similarity=1.008  Sum_probs=39.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~  239 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF  239 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCC
Confidence            4679999999999999899999999999999999998877764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=5.3e-07  Score=82.38  Aligned_cols=43  Identities=53%  Similarity=1.098  Sum_probs=38.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~  204 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH  204 (320)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCC
Confidence            4579999999999999999999999999999999998877773

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=7.6e-07  Score=80.11  Aligned_cols=43  Identities=40%  Similarity=0.632  Sum_probs=35.1

Q ss_pred             cCcCCCCcccccccc-----cCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~-----~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.     ...++.++|+||+||++|+|+.+.-+|.
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~  216 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH  216 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCC
Confidence            568999999999985     3457788999999999999988766663

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.94  E-value=6.8e-07  Score=83.16  Aligned_cols=43  Identities=40%  Similarity=0.848  Sum_probs=37.9

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.. ..++.++|+||+||++|+|+.+.-+|.
T Consensus       164 ~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~  207 (364)
T d1omwa3         164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR  207 (364)
T ss_dssp             SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCC
Confidence            4579999999999875 468999999999999999999888874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=7.9e-07  Score=79.95  Aligned_cols=43  Identities=42%  Similarity=0.788  Sum_probs=38.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+...-+|.
T Consensus       175 ~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  217 (293)
T d1jksa_         175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  217 (293)
T ss_dssp             CCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCC
Confidence            4579999999999998889999999999999999998877774

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.89  E-value=7.7e-07  Score=80.88  Aligned_cols=43  Identities=40%  Similarity=0.641  Sum_probs=35.8

Q ss_pred             cCcCCCCccccccccc---CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~---~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+   ..|+.++|+||+||++|+|+.+.-+|.
T Consensus       170 ~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~  215 (309)
T d1u5ra_         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF  215 (309)
T ss_dssp             CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCC
Confidence            4579999999999864   347888999999999999998776664

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.88  E-value=6e-07  Score=83.09  Aligned_cols=43  Identities=37%  Similarity=0.549  Sum_probs=38.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~  226 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG  226 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCC
Confidence            4579999999999999889999999999999999998877763

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=2.1e-06  Score=78.16  Aligned_cols=44  Identities=34%  Similarity=0.554  Sum_probs=38.1

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      .+.+||+.|+|||++.+..|+.++|+||+||++|+|+.+.-+|.
T Consensus       161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~  204 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP  204 (322)
T ss_dssp             ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSS
T ss_pred             ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            35689999999999999899999999999999999998877774

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.3e-06  Score=77.72  Aligned_cols=43  Identities=35%  Similarity=0.591  Sum_probs=35.2

Q ss_pred             cCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||++.+..+ +.++|+||+||++|+|+.+.-+|.
T Consensus       168 ~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  211 (273)
T d1xwsa_         168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE  211 (273)
T ss_dssp             CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCC
Confidence            4679999999999987654 566899999999999988776664

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=2.6e-06  Score=75.62  Aligned_cols=43  Identities=37%  Similarity=0.719  Sum_probs=36.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+....+|.
T Consensus       173 ~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~  215 (269)
T d2java1         173 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT  215 (269)
T ss_dssp             ---CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCC
Confidence            4689999999999988889999999999999999998877763

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=2.8e-06  Score=76.33  Aligned_cols=42  Identities=33%  Similarity=0.594  Sum_probs=35.5

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++... .++.++|+||+||++|+|+.+.-+|
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf  201 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  201 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCC
Confidence            45899999999998754 5788999999999999999875444

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=97.68  E-value=2.2e-06  Score=79.29  Aligned_cols=43  Identities=30%  Similarity=0.535  Sum_probs=38.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  229 (352)
T d1koba_         187 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA  229 (352)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             eccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence            4579999999999998889999999999999999998877764

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.64  E-value=4.2e-06  Score=74.60  Aligned_cols=42  Identities=48%  Similarity=0.943  Sum_probs=29.9

Q ss_pred             cCcCCCCcccccccccC------CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT------GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~------~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+.      .++.++|+||+||++|+|+.+.-+|
T Consensus       168 ~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf  215 (277)
T d1phka_         168 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF  215 (277)
T ss_dssp             CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCC
Confidence            45799999999998642      3455677777777777777665555

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=7e-06  Score=74.15  Aligned_cols=43  Identities=37%  Similarity=0.619  Sum_probs=36.2

Q ss_pred             ccCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      .+.+||+.|+|||++.+. .++.++|+||+||++++|+...-+|
T Consensus       179 ~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf  222 (318)
T d3blha1         179 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM  222 (318)
T ss_dssp             CSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCC
Confidence            345899999999998865 6788999999999999999776555

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.57  E-value=4.9e-06  Score=73.83  Aligned_cols=43  Identities=30%  Similarity=0.577  Sum_probs=32.8

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|
T Consensus       172 ~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf  214 (277)
T d1o6ya_         172 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF  214 (277)
T ss_dssp             -------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCC
Confidence            3568999999999998888899999999999999999887666

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=5.8e-06  Score=75.74  Aligned_cols=43  Identities=44%  Similarity=0.722  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+.+.-+|.
T Consensus       172 ~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~  214 (335)
T d2ozaa1         172 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  214 (335)
T ss_dssp             CCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCE
T ss_pred             cccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCC
Confidence            4579999999999988888999999999999999998877774

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=6.7e-06  Score=73.06  Aligned_cols=44  Identities=27%  Similarity=0.528  Sum_probs=37.1

Q ss_pred             ccCcCCCCcccccccccCCC-CCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~-~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..+ +.++|+||+||++|+|+.+.-+|.
T Consensus       163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~  207 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD  207 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred             cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCC
Confidence            45689999999999987765 567899999999999998776663

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=1.1e-05  Score=71.10  Aligned_cols=41  Identities=32%  Similarity=0.616  Sum_probs=32.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ...||+.|+|||++.+..++.++|+||+||++|||+..-.+
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~  201 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI  201 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCC
Confidence            34799999999999988899999999999999999854333

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=9.6e-06  Score=73.78  Aligned_cols=42  Identities=21%  Similarity=0.517  Sum_probs=36.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      +..||+.|+|||++.+..++.++|+||+||++|+|+. +.-+|
T Consensus       225 ~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf  267 (325)
T d1rjba_         225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  267 (325)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             cccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCC
Confidence            4568999999999998889999999999999999984 55555

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=5.6e-06  Score=75.36  Aligned_cols=43  Identities=37%  Similarity=0.645  Sum_probs=38.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||.+.+..++.++|+||+||++|+|+.+..+|.
T Consensus       162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~  204 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCC
Confidence            4579999999999998889999999999999999998877763

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.37  E-value=1.2e-05  Score=72.22  Aligned_cols=41  Identities=24%  Similarity=0.497  Sum_probs=32.6

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ..||+.|+|||.+.+..++.++|+||+||++|||+. +.-+|
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf  234 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY  234 (299)
T ss_dssp             ---CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCC
Confidence            468999999999988888999999999999999984 44444

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=1.5e-05  Score=71.32  Aligned_cols=39  Identities=26%  Similarity=0.533  Sum_probs=34.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcC
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAP  319 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~  319 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++|+|+...
T Consensus       195 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~  233 (299)
T d1ywna1         195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG  233 (299)
T ss_dssp             SCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCC
Confidence            457999999999999888999999999999999998543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=1.4e-05  Score=70.66  Aligned_cols=37  Identities=30%  Similarity=0.532  Sum_probs=31.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~  317 (351)
                      ...||+.|+|||++.+..++.++|+||+||++|+|+.
T Consensus       168 ~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt  204 (273)
T d1mp8a_         168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  204 (273)
T ss_dssp             ---CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred             ceecCcccchhhHhccCCCCCccccccchHHHHHHHh
Confidence            3468999999999998889999999999999999885

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=2e-05  Score=71.97  Aligned_cols=42  Identities=43%  Similarity=0.622  Sum_probs=36.0

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+. .++.++|+||+||++|+|+...-+|
T Consensus       177 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf  219 (346)
T d1cm8a_         177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF  219 (346)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCC
Confidence            45799999999998864 5688999999999999999876665

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=1.7e-05  Score=70.50  Aligned_cols=41  Identities=27%  Similarity=0.474  Sum_probs=33.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ...||+.|+|||++.+..++.++|+||+||++|||+..-.+
T Consensus       172 ~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~  212 (283)
T d1mqba_         172 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER  212 (283)
T ss_dssp             --CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCC
Confidence            34689999999999888889999999999999999864333

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=2.4e-05  Score=69.98  Aligned_cols=43  Identities=42%  Similarity=0.609  Sum_probs=36.6

Q ss_pred             cCcCCCCcccccccccCC-CCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~-~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.... ++.++|+||+||++|+|+.+.-+|.
T Consensus       161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~  204 (298)
T d1gz8a_         161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP  204 (298)
T ss_dssp             CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCC
Confidence            457999999999987765 4788999999999999998877663

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=1.8e-05  Score=69.73  Aligned_cols=40  Identities=23%  Similarity=0.498  Sum_probs=32.8

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ..||+.|+|||++.+..++.++|+||+|+++|||+..-++
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~  199 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  199 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCC
Confidence            3688999999999888889999999999999999864343

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=2.8e-05  Score=71.28  Aligned_cols=43  Identities=33%  Similarity=0.624  Sum_probs=37.0

Q ss_pred             cCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +.+||+.|+|||.+.+ ..++.++|+||+||++|+|+.+..+|.
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~  224 (350)
T d1q5ka_         181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  224 (350)
T ss_dssp             SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             cccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCC
Confidence            4589999999998875 468999999999999999998876663

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=1.5e-05  Score=71.14  Aligned_cols=42  Identities=19%  Similarity=0.343  Sum_probs=35.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+||++|+|+..-.++
T Consensus       175 ~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~  216 (287)
T d1opja_         175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  216 (287)
T ss_dssp             TEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence            346899999999999888999999999999999998654443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=2e-05  Score=71.22  Aligned_cols=36  Identities=28%  Similarity=0.477  Sum_probs=32.0

Q ss_pred             CcCCCCcccccccccCCCCCCCcccccchhhhhhhh
Q psy17600        282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI  317 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~  317 (351)
                      ..||+.|+|||++.+..++.++|+||+||++|||+.
T Consensus       173 ~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t  208 (317)
T d1xkka_         173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  208 (317)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCccccChHHHhcCCCChhhhhhhHHHHHHHHHH
Confidence            468999999999998889999999999999999985

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=1.4e-05  Score=70.68  Aligned_cols=41  Identities=20%  Similarity=0.390  Sum_probs=35.0

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ...||+.|+|||++.+..++.++|+||+||++|+|+....+
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~  209 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCC
Confidence            45799999999999888889999999999999999864333

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=1.3e-05  Score=71.22  Aligned_cols=42  Identities=24%  Similarity=0.464  Sum_probs=34.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+||++|||+. +.-+|
T Consensus       169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf  211 (277)
T d1xbba_         169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY  211 (277)
T ss_dssp             --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCC
Confidence            3468999999999988888899999999999999884 45554

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=1.8e-05  Score=70.71  Aligned_cols=42  Identities=26%  Similarity=0.448  Sum_probs=35.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++....++.++|+||+||++|||+. +.-+|
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf  213 (285)
T d1u59a_         171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY  213 (285)
T ss_dssp             SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCC
Confidence            4468999999999988888999999999999999884 45555

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=2.6e-05  Score=69.25  Aligned_cols=43  Identities=23%  Similarity=0.496  Sum_probs=34.1

Q ss_pred             ccCcCCCCcccccccccC---CCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQT---GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~---~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      .+.+||+.|+|||++.+.   .++.++|+||+||++|||+.+..+|
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf  209 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY  209 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCC
Confidence            345799999999998643   3677889999999999999776666

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.19  E-value=2.4e-05  Score=70.21  Aligned_cols=40  Identities=20%  Similarity=0.473  Sum_probs=34.2

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPE  320 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e  320 (351)
                      +..||+.|+|||.+.+..++.++|+||+||++|||+...+
T Consensus       201 ~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~  240 (301)
T d1lufa_         201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL  240 (301)
T ss_dssp             -CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCC
Confidence            4578999999999998889999999999999999986543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=4.5e-05  Score=69.17  Aligned_cols=44  Identities=45%  Similarity=0.927  Sum_probs=35.8

Q ss_pred             ccCcCCCCcccccccccC--CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQT--GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~--~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ....|++.|++||.+.+.  .++.++|+||+||++|+|+.+.-+|.
T Consensus       188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~  233 (322)
T d1vzoa_         188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT  233 (322)
T ss_dssp             CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence            345799999999998764  35778999999999999998887774

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.12  E-value=3.2e-05  Score=69.03  Aligned_cols=44  Identities=18%  Similarity=0.195  Sum_probs=38.9

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+||++++|+.+.-++.
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~  214 (299)
T d1ckia_         171 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ  214 (299)
T ss_dssp             CSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             CCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCccc
Confidence            35689999999999998889999999999999999998776663

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=1.5e-05  Score=70.71  Aligned_cols=42  Identities=26%  Similarity=0.477  Sum_probs=34.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...|++.|+|||++.+..++.++|+||+|+++|||+. +..+|
T Consensus       173 ~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf  215 (273)
T d1u46a_         173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW  215 (273)
T ss_dssp             ---CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCC
Confidence            3457889999999998888999999999999999985 55555

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=3.7e-05  Score=67.51  Aligned_cols=42  Identities=21%  Similarity=0.534  Sum_probs=35.6

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||++.+..++.++|+||+|+++|||+. +..+|
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf  202 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY  202 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCC
Confidence            3579999999999998888999999999999999985 45444

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=3.9e-05  Score=68.73  Aligned_cols=42  Identities=24%  Similarity=0.551  Sum_probs=35.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhh-cCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI-APEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~-~~e~~  322 (351)
                      ...||+.|+|||.+.+..++.++|+||+|+++|+|+. ..-++
T Consensus       196 ~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~  238 (299)
T d1fgka_         196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY  238 (299)
T ss_dssp             TSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCC
Confidence            4578999999999998889999999999999999985 34444

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.08  E-value=3.8e-05  Score=68.56  Aligned_cols=44  Identities=18%  Similarity=0.205  Sum_probs=39.0

Q ss_pred             ccCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ...+||+.|+|||++.+..++.++|+||+|+++|+|+.+.-++.
T Consensus       171 ~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~  214 (293)
T d1csna_         171 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  214 (293)
T ss_dssp             CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             CceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCC
Confidence            35689999999999998889999999999999999998776664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=4.4e-05  Score=68.06  Aligned_cols=42  Identities=24%  Similarity=0.364  Sum_probs=33.7

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||++....++.++|+||+|+++|+|+..-.++
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~  214 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  214 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCC
Confidence            346999999999999888899999999999999998543333

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=6.5e-05  Score=68.85  Aligned_cols=42  Identities=45%  Similarity=0.634  Sum_probs=34.4

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+...-+|
T Consensus       177 ~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF  218 (355)
T d2b1pa1         177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF  218 (355)
T ss_dssp             ----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCC
Confidence            457999999999999888999999999999999999876555

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=4.8e-05  Score=68.47  Aligned_cols=41  Identities=22%  Similarity=0.457  Sum_probs=34.3

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+..-.+
T Consensus       206 ~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p  246 (311)
T d1t46a_         206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS  246 (311)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCC
Confidence            45799999999999888888899999999999999853333

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=96.93  E-value=7.2e-05  Score=67.58  Aligned_cols=43  Identities=28%  Similarity=0.564  Sum_probs=36.9

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||.+.+. .++.++|+||+||++++|+....+|.
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~  231 (328)
T d3bqca1         188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  231 (328)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCC
Confidence            45799999999998865 47889999999999999998877664

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=96.86  E-value=8.4e-05  Score=65.76  Aligned_cols=42  Identities=33%  Similarity=0.597  Sum_probs=33.5

Q ss_pred             cCcCCCCcccccccccC-CCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~-~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+|++.|+|||.+.+. .++.++|+||+||++++|+.+.-+|
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf  201 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF  201 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCC
Confidence            34689999999998764 4688999999999999999776555

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00015  Score=65.95  Aligned_cols=43  Identities=42%  Similarity=0.690  Sum_probs=33.9

Q ss_pred             ccCcCCCCccccccccc-CCCCCCCcccccchhhhhhhhcCccc
Q psy17600        280 YSTVGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       280 ~~~~Gt~~y~aPe~~~~-~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...+||+.|+|||++.. ..++.++|+||+||++|+|+.+.-+|
T Consensus       170 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf  213 (345)
T d1pmea_         170 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF  213 (345)
T ss_dssp             CCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCC
Confidence            45689999999999854 45677888888888888888776555

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.79  E-value=0.00011  Score=66.90  Aligned_cols=43  Identities=30%  Similarity=0.650  Sum_probs=37.8

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      ..+||+.|+|||++.+..++.++|+||+||++++|+.+.-+|.
T Consensus       188 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~  230 (362)
T d1q8ya_         188 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE  230 (362)
T ss_dssp             SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             cccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCC
Confidence            4579999999999998889999999999999999998776664

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=6.3e-05  Score=67.58  Aligned_cols=41  Identities=22%  Similarity=0.342  Sum_probs=34.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCcc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEV  321 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~  321 (351)
                      ...||+.|+|||.+....++.++|+||+||++|+|+..-.+
T Consensus       185 ~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~  225 (309)
T d1fvra_         185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  225 (309)
T ss_dssp             ---CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCC
Confidence            34689999999999988899999999999999999875544

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00012  Score=65.85  Aligned_cols=42  Identities=19%  Similarity=0.383  Sum_probs=36.5

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ...||+.|+|||.+....++.++|+||+|+++|||+..-.++
T Consensus       193 ~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~  234 (311)
T d1r0pa_         193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP  234 (311)
T ss_dssp             CSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCC
Confidence            457999999999999888999999999999999998665554

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=9.6e-05  Score=67.17  Aligned_cols=43  Identities=40%  Similarity=0.609  Sum_probs=35.8

Q ss_pred             cCcCCCCcccccccccCC-CCCCCcccccchhhhhhhhcCcccc
Q psy17600        281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVFL  323 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~-~~~~~D~ws~G~i~~~l~~~~e~~~  323 (351)
                      +..||+.|+|||+..+.. ++.++|+||+||++|+|+.+.-+|.
T Consensus       177 ~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~  220 (348)
T d2gfsa1         177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  220 (348)
T ss_dssp             SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCC
Confidence            457999999999877654 5889999999999999998876663

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00012  Score=65.64  Aligned_cols=42  Identities=29%  Similarity=0.426  Sum_probs=30.2

Q ss_pred             cCcCCCCcccccccccCC------CCCCCcccccchhhhhhhhcCccc
Q psy17600        281 STVGTPDYIAPEVFLQTG------YGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~------~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+||+.|+|||++....      ++.++|+||+||++|||+....++
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~  218 (303)
T d1vjya_         171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             -CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             ceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCC
Confidence            457999999999987532      344678888888888877665444

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0002  Score=64.23  Aligned_cols=40  Identities=23%  Similarity=0.494  Sum_probs=34.1

Q ss_pred             cCcCCCCcccccccccCCCCCCCcccccchhhhhhhhcCc
Q psy17600        281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPE  320 (351)
Q Consensus       281 ~~~Gt~~y~aPe~~~~~~~~~~~D~ws~G~i~~~l~~~~e  320 (351)
                      ..+||+.|+|||.+.+..++.++|+||+|+++++|+..-+
T Consensus       194 ~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~  233 (308)
T d1p4oa_         194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE  233 (308)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSC
T ss_pred             ceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCC
Confidence            3468999999999998888889999999999999986543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00028  Score=62.10  Aligned_cols=41  Identities=32%  Similarity=0.474  Sum_probs=33.7

Q ss_pred             CcCCCCcccccccccCC-CCCCCcccccchhhhhhhhcCccc
Q psy17600        282 TVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVF  322 (351)
Q Consensus       282 ~~Gt~~y~aPe~~~~~~-~~~~~D~ws~G~i~~~l~~~~e~~  322 (351)
                      ..+++.|.+||++.... ++.++|+||+||++++|+..-.++
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  202 (292)
T d1unla_         161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred             eccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCC
Confidence            35788899999887654 688899999999999998776665

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.11  E-value=0.0036  Score=53.53  Aligned_cols=28  Identities=21%  Similarity=0.362  Sum_probs=24.5

Q ss_pred             CeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         64 FIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        64 iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      ++|+|+.|.||+++.++.+-|+||+.+.
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEeeccCcceeecCCceEEEeechhcc
Confidence            7899999999999876666799999875

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.35  E-value=0.033  Score=50.82  Aligned_cols=28  Identities=18%  Similarity=0.311  Sum_probs=24.5

Q ss_pred             CCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         63 GFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        63 ~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .++|+|+.|.|||++.++ ++|+||-+|.
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhcc
Confidence            589999999999998765 8999998875

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.49  E-value=0.028  Score=49.33  Aligned_cols=30  Identities=30%  Similarity=0.398  Sum_probs=26.9

Q ss_pred             CCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        62 ~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .|+||.|+.+.|++++.+...-++||+.|.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            479999999999999988777899999875

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=85.00  E-value=0.29  Score=42.86  Aligned_cols=28  Identities=21%  Similarity=0.271  Sum_probs=23.0

Q ss_pred             CCCeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        62 ~~iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      .++||.|+.+.|||++. + ..++||+-|.
T Consensus       192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~~  219 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD-G-PMFVDLDDAR  219 (325)
T ss_dssp             CEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred             ceeecCCCCcccEEEeC-C-ceEEechhcc
Confidence            36899999999999974 3 4589999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=83.58  E-value=0.15  Score=42.49  Aligned_cols=28  Identities=18%  Similarity=0.205  Sum_probs=24.7

Q ss_pred             CeeccCCCCcEEecCCCcEEEEecCccc
Q psy17600         64 FIHRDIKPDNLLLDARGHIKLSDFGLCT   91 (351)
Q Consensus        64 iihrDlkp~Nill~~~~~~kl~DFGla~   91 (351)
                      +||+|+.|.||+++.++.+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            7999999999999877667799999874