Diaphorina citri psyllid: psy1760

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790---
MILPSISPVSVVIPKYKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYKGIPLYKYARSGITIKRKLRYIKIYKITIIDYTIPYLTLRIHCSKGTYIRVLSEDIGKMLGCGAHLKYLRRIGIDKLTLDKNIAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLINIIKIILIYKYMNGDVAEWLKALPC
ccccccccCEEEEccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHEEEEEcccccccccCEEEEcccccccHHHHHHHHHHHccccccccccccccccccccccEEEcccccCEEEEEEEEEEEEEEEEEEcccEEEEEEEEccccHHHHHHHHccccccccccccccccccccccccccCEEEEEEccccHHHHHHHHHHHccccccccccccccccccccccccccEEECccEEEECccCEEEEEccccccccccHHHHHcccccEEEEEEEccccccccHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccccHHHHHHHHccccccccccccccEEEEEEcccccccEEEEEEEEEEEEEccccEEEEEEcccccEEEEEEEEEEEEcccccEEccccccccEEEEccccccccccccccccccccccccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHcEEEEEECcccccccEEEEcccHHHHHHHHHHcccccccccccccEEEEEEEccCECccEEEEEEEcccccHHHHHHHHHcccccCCccCEccccEEEEEEEccccccccccccccccccccCEEEEcccccccccccccccccccccEEEEEcccccHHHHHHccccccccEEEcccccccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEccc
****S*SPVSVVIPKYKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYKGIPLYKYARSGITIKRKLRYIKIYKITIIDYTIPYLTLRIHCSKGTYIRVLSEDIGKMLGCGAHLKYLRRIGIDKLTLDKNIAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLINIIKIILIYKYMNGDVAEWLKALPC
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MILPSISPVSVVIPKYKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYKGIPLYKYARSGITIKRKLRYIKIYKITIIDYTIPYLTLRIHCSKGTYIRVLSEDIGKMLGCGAHLKYLRRIGIDKLTLDKNIAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLINIIKIILIYKYMNGDVAEWLKALPC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GTP-binding protein TypA/BipA Not known; probably interacts with the ribosomes in a GTP dependent manner.confidentP0A3B1
GTP-binding protein TypA/BipA Probably interacts with the ribosomes in a GTP dependent manner. GTPase that mediates interactions between enteropathogenic E.coli (EPEC) and epithelial cells.confidentP0A3B2
GTP-binding protein TypA/BipA Not known; probably interacts with the ribosomes in a GTP dependent manner.confidentP0A3B4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0009570 [CC]chloroplast stromaprobableGO:0005737, GO:0005575, GO:0009536, GO:0043231, GO:0009532, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044435, GO:0044434, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0009507
GO:0009409 [BP]response to coldprobableGO:0009628, GO:0006950, GO:0008150, GO:0050896, GO:0009266
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576
GO:0005525 [MF]GTP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2RDO, chain 7
Confidence level:very confident
Coverage over the Query: 211-243,262-376,387-683
View the alignment between query and template
View the model in PyMOL
Template: 3E3X, chain A
Confidence level:very confident
Coverage over the Query: 508-749,764-790
View the alignment between query and template
View the model in PyMOL
Template: 1K8W, chain A
Confidence level:very confident
Coverage over the Query: 7-214
View the alignment between query and template
View the model in PyMOL