Diaphorina citri psyllid: psy17672


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MDVEQFRLICQDECGIDATDMILLNNGKHLLEDGSCLKQAGVRDGDIILVAMPGRGPTYHVAQSRHTAPHRSFMTAQLQDPAHVRDLLLACPDQLALLKQNNPRLSEALSTGKDAFTKVFKEQLVEREKRQKQKIKLMNAHPFDTHAQRLIAEEIRQKNVEANMEAAMEYNPETFGSVVMLYINCKVNGYPVKAFVDSGAQTTIMSAKCAERCNIMRLIDTRWAGVAKGVGVQQIIGRIHMVQVAIEKDFLTTSLSILEEQPMDMLLGLDMLRRHECCIDLRKNVLRIGTTGTETKFLPERELPSCARLTSASDEEEYF
ccHHHHHHHHHHHccccccccEEEEccCCcccccccccccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEccCEEEEEEccccccccccHHHHHHcccccccccccccEEcccccEEEEEEEEEEEEEEccEEEEEEEEEcccccccccccHHHHHHccEEEEccccEEEEcccccEECccccccccccccccccccccccc
MDVEQFRLICQDECGIDATDMILLNNGKHLLEDGSCLKQAGVRDGDIILVAMPG**********************QLQDPAHVRDLLLACPDQLALLKQ***************FTKVF************************THAQRLIAEEIRQKNVEANMEAAMEYNPETFGSVVMLYINCKVNGYPVKAFVDSGAQTTIMSAKCAERCNIMRLIDTRWAGVAKGVGVQQIIGRIHMVQVAIEKDFLTTSLSILEEQPMDMLLGLDMLRRHECCIDLRKNVLRIGTTGTETKFLP********************
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MDVEQFRLICQDECGIDATDMILLNNGKHLLEDGSCLKQAGVRDGDIILVAMPGRGPTYHVAQSRHTAPHRSFMTAQLQDPAHVRDLLLACPDQLALLKQNNPRLSEALSTGKDAFTKVFKEQLVEREKRQKQKIKLMNAHPFDTHAQRLIAEEIRQKNVEANMEAAMEYNPETFGSVVMLYINCKVNGYPVKAFVDSGAQTTIMSAKCAERCNIMRLIDTRWAGVAKGVGVQQIIGRIHMVQVAIEKDFLTTSLSILEEQPMDMLLGLDMLRRHECCIDLRKNVLRIGTTGTETKFLPERELPSCARLTSASDEEEYF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein DDI1 homolog 2 very confidentQ497D6
Protein DDI1 homolog 2 confidentQ5TDH0
Protein DDI1 homolog 2 confidentQ6TH22

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0043130 [MF]ubiquitin bindingprobableGO:0003674, GO:0032182, GO:0005488, GO:0005515
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0006508 [BP]proteolysisprobableGO:0044238, GO:0019538, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0004190 [MF]aspartic-type endopeptidase activityprobableGO:0016787, GO:0004175, GO:0070001, GO:0003824, GO:0070011, GO:0003674, GO:0008233

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3S8I, chain A
Confidence level:very confident
Coverage over the Query: 178-304
View the alignment between query and template
View the model in PyMOL
Template: 1V5O, chain A
Confidence level:confident
Coverage over the Query: 1-54
View the alignment between query and template
View the model in PyMOL
Template: 2QSF, chain X
Confidence level:probable
Coverage over the Query: 77-122
View the alignment between query and template
View the model in PyMOL