Psyllid ID: psy1773

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT
Secondary Structure (PSIPRED)
ccccccHHHHHHHcccccccccccccccccccccHHHHHHHccccccccccHHHHcccccccHHHHcccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHcccccccccccccccccEEccccccEEEEcccccccccEccccccEEccccccEEEEEEEEcccccccEEEccccccccEccccHHHHHHHHccccccccccccccccccccccEccccHHHHHHHHcccccccccEEcccccccEccccHHHHHHHHcccccccEcccccccccEccccHHHEHEHHcccccccccccHHHccccEccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccEEEEcccccccEccccHHHHHHHHHccccccEEcccccccccEccccHHHHHHHHcccccccEEEEcccccccEccccHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLginkeyfisstggknskkqqlwscpivncnftsvnlNTFKIHLLkhfdkrpfkcklttanntpcmwgffskhkLLRHmtshdedkkcypcdqkncnkrfTTLSNLKMhmvrhgkpltlcceelgcgrkfqtMKQYSTHLkehsnvsapymcdykgcgksFYLMASLKShqrvhvtnpedlvckgcgkqfkvpcrlREHYKAVHestknfkctydgcklLFSTKSALKrhnkskhlnmrmfpcplvtcgksflrSEHLQEHMLqhnenkpkftcpyqdclmSYVAKSSLYAHLKhvhstnkit
Flexible Loop (DISEMBL)
rfavkkllefaqdtddvsarnVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDedkkcypcdqknCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVhestknfkctydGCKLLFSTKSALKRHNKskhlnmrmfpCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHlkhvhstnkit
Low Complexity Region (SEG)
RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT
Disordered region (IsUnstruct)
******LLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISSTGGK**KKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV*******
Disordered Region (DISOPRED)
*FA**KLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEY*ISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN*I*
Disordered Region (DISEMBL)
RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISS*********QLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH********
Disordered Region (DISPRO)
**************DDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH*KHVH******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEEDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
A2CE44	873	Zinc finger X-linked prot	yes	N/A	0.729	0.300	0.399	4e-47
P98169	803	Zinc finger X-linked prot	yes	N/A	0.729	0.326	0.395	1e-45
Q2QGD7	858	Zinc finger protein ZXDC	no	N/A	0.743	0.311	0.383	2e-45
Q8C8V1	858	Zinc finger protein ZXDC	no	N/A	0.743	0.311	0.381	2e-45
P98168	799	Zinc finger X-linked prot	yes	N/A	0.729	0.327	0.392	1e-44
Q8VHT7	364	Transcription factor IIIA	no	N/A	0.813	0.802	0.301	3e-26
P34694	339	Transcription factor IIIA	N/A	N/A	0.685	0.725	0.303	4e-26
Q8VHT8	363	Transcription factor IIIA	no	N/A	0.791	0.782	0.303	3e-25
P03001	366	Transcription factor IIIA	N/A	N/A	0.685	0.672	0.303	2e-24
P17842	339	Transcription factor IIIA	N/A	N/A	0.679	0.719	0.315	5e-24

>sp|A2CE44|ZXDAB_MOUSE Zinc finger X-linked protein ZXDA/ZXDB OS=Mus musculus GN=Zxda PE=2 SV=1

 Score =  189 bits (479), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/278 (39%), Positives = 149/278 (53%), Gaps = 16/278 (5%)

Query: 78  LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
           L+ CP   C  T    +  K+HLL H     +RPFKC L+      C W F + +KL RH
Sbjct: 339 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSG-----CGWTFTTSYKLKRH 393

Query: 135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
           + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + ST
Sbjct: 394 LQSHDKLRP-FGCPVQGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLST 450

Query: 195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFKVPCRL 252
           H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct: 451 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFACSFPGCSKQYDKACRL 510

Query: 253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
           + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct: 511 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFTCPVEGCGKSFTRAE 568

Query: 313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           HL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 569 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 605

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.
Mus musculus (taxid: 10090)

>sp|P98169|ZXDB_HUMAN Zinc finger X-linked protein ZXDB OS=Homo sapiens GN=ZXDB PE=2 SV=2

 Score =  184 bits (466), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/278 (39%), Positives = 146/278 (52%), Gaps = 16/278 (5%)

Query: 78  LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
           L+ CP   C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct: 270 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGG-----CGWTFTTSYKLKRH 324

Query: 135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
           + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + S 
Sbjct: 325 LQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSA 381

Query: 195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFKVPCRL 252
           H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct: 382 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRL 441

Query: 253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
           + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct: 442 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHDDDRRFMCPVEGCGKSFTRAE 499

Query: 313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           HL+ H + H   KP F CP   C   + A+SSLY H K
Sbjct: 500 HLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSK 536

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|Q2QGD7|ZXDC_HUMAN Zinc finger protein ZXDC OS=Homo sapiens GN=ZXDC PE=1 SV=2

 Score =  183 bits (465), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/284 (38%), Positives = 147/284 (51%), Gaps = 17/284 (5%)

Query: 79  WSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRHM 135
           + CP   C       +  K+HLL H     +RPFKC L       C W F + +KL RH+
Sbjct: 175 YRCPEPQCALAFAKKHQLKVHLLTHGGGQGRRPFKCPLEG-----CGWAFTTSYKLKRHL 229

Query: 136 TSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH 195
            SHD+ +  + C    C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H
Sbjct: 230 QSHDKLRP-FGCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTHAKLSSH 286

Query: 196 LKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFKVPCRLR 253
            + H     PY CD+ GC K+F  +++L SH R H    E   C   GC KQ+   CRL+
Sbjct: 287 QRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLK 346

Query: 254 EHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEH 313
            H ++ H   + F C  D C   F++ S L RH + KH + R F CP+  CGKSF R+EH
Sbjct: 347 IHLRS-HTGERPFICDSDSCGWTFTSMSKLLRHRR-KHDDDRRFTCPVEGCGKSFTRAEH 404

Query: 314 LQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL-KHVHSTN 356
           L+ H + H   KP F CP + C   + A+SSLY H  KHV    
Sbjct: 405 LKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHVQDVG 447

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|Q8C8V1|ZXDC_MOUSE Zinc finger protein ZXDC OS=Mus musculus GN=Zxdc PE=2 SV=1

 Score =  183 bits (464), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 147/283 (51%), Gaps = 16/283 (5%)

Query: 73  SKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHF---DKRPFKCKLTTANNTPCMWGFFSKH 129
           S     + CP   C  +    +  K+HLL H     +RPFKC L       C W F + +
Sbjct: 170 SAGSPAYRCPEPQCALSFAKKHQLKVHLLTHGSLQGRRPFKCPLDG-----CGWAFTTSY 224

Query: 130 KLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTM 189
           KL RH+ SHD+ +  + C    C K+FTT+ NLK HM  H +     CE   C  +F T 
Sbjct: 225 KLKRHLQSHDKLRP-FSCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEV--CAERFPTH 281

Query: 190 KQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFK 247
            + ++H + H     PY CD+ GC K+F  +++L SH R H    E   C   GC KQ+ 
Sbjct: 282 AKLNSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCNKQYD 341

Query: 248 VPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKS 307
             CRL+ H ++ H   + F C  D C   F++ S L RH K KH + R F CP+  CGKS
Sbjct: 342 KACRLKIHLRS-HTGERPFICDSDSCGWTFTSMSKLLRH-KRKHDDDRRFTCPVEGCGKS 399

Query: 308 FLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           F R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 400 FTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSK 441

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Mus musculus (taxid: 10090)

>sp|P98168|ZXDA_HUMAN Zinc finger X-linked protein ZXDA OS=Homo sapiens GN=ZXDA PE=1 SV=2

 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 145/278 (52%), Gaps = 16/278 (5%)

Query: 78  LWSCPIVNCNFTSVNLNTFKIHLLKHF---DKRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
           L+ CP   C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct: 266 LYLCPEALCGQTFAKKHQLKMHLLTHSSSQGQRPFKCPLGG-----CGWTFTTSYKLKRH 320

Query: 135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
           + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  +   
Sbjct: 321 LQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLGA 377

Query: 195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFKVPCRL 252
           H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct: 378 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRL 437

Query: 253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
           + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct: 438 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHDDDRRFMCPVEGCGKSFTRAE 495

Query: 313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           HL+ H + H   KP F CP   C   + A+SSLY H K
Sbjct: 496 HLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSK 532

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|Q8VHT7|TF3A_MOUSE Transcription factor IIIA OS=Mus musculus GN=Gtf3a PE=2 SV=2

 Score =  119 bits (299), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 146/315 (46%), Gaps = 23/315 (7%)

Query: 49  AITEALQSLGINKEYFISSTGGKNSKKQQLWS---CPIVNCNFTSVNLNTFKIHLLKHFD 105
           ++ EA+ SL I  + F+ +  G    +  L S   C   +C+ +         HL KH  
Sbjct: 6   SVAEAVSSLTI-ADAFVGACEGPAPPRPALPSRFICSFPDCSASYNKAWKLDAHLCKHTG 64

Query: 106 KRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMH 165
           +RPF C         C   F   + L RH+  H  +K  + C    CN++F T SNLK H
Sbjct: 65  ERPFVCDYEG-----CGKAFIRDYHLSRHVLIHTGEKP-FVCADDGCNQKFNTKSNLKKH 118

Query: 166 MVR-HGKPL-TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASL 223
           + R HG P     C   GC + F+  +Q  TH  +H++    + C ++GCGK F   + L
Sbjct: 119 IERKHGNPQKQYVCSYEGCKKAFKKHQQLRTHQCQHTSEPL-FRCTHEGCGKHFASPSRL 177

Query: 224 KSHQRVHVTNPEDLVC-KGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSA 282
           K H +VH    E  +C KGC    K    L +H +  H+       T + C+ +F  +  
Sbjct: 178 KRHGKVH----EGYLCQKGCSFMGKTWTELLKHMREAHKED----ITCNVCQRMFKRRDY 229

Query: 283 LKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAK 342
           LK+H K+      ++ CP   CG+++    +LQ H+L  +E K  F C +  C  ++  K
Sbjct: 230 LKQHMKTHAPERDVYRCPRQGCGRTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMK 289

Query: 343 SSLYAHLKHVHSTNK 357
            SL  H   VH  +K
Sbjct: 290 QSLMRH-SVVHDPDK 303

Interacts with the internal control region (ICR) of approximately 50 bases within the 5S RNA genes, is required for correct transcription of these genes by RNA polymerase III. Also binds the transcribed 5S RNA's. May initiate transcription of the 5S ribosomal RNA gene and maintain the stability of transcription of other genes.

Mus musculus (taxid: 10090)

>sp|P34694|TF3A_ANAAE Transcription factor IIIA OS=Anaxyrus americanus GN=gtf3a PE=2 SV=1

 Score =  119 bits (298), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 123/280 (43%), Gaps = 34/280 (12%)

Query: 79  WSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH 138
           + C   +CN T       + HL KH  +RPF C         C  GF + H L RH+ SH
Sbjct: 12  FICSFPDCNATYNKNRKLQAHLCKHTGERPFPCTYEG-----CEKGFVTLHHLNRHVLSH 66

Query: 139 DEDKKCYPCDQKNCNKRFTTLSNLKMHMVR-HGKPLTL-CCEELGCGRKFQTMKQYSTHL 196
             +K C  C+ +NCN  FTT SN+++H  R H  P  +  C    CG++F+   Q   H 
Sbjct: 67  TGEKPCK-CETENCNLAFTTASNMRLHFKRAHSSPAQVYVCYFADCGQQFRKHNQLKIHQ 125

Query: 197 KEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP---------------------- 234
             H+N   P+ C ++GC K +   + LK H++ H   P                      
Sbjct: 126 YIHTN-QQPFKCSHEGCDKCYASPSRLKRHEKTHAGYPCRKDSTCPFVGKTWSDYMKHAA 184

Query: 235 ---EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKH 291
               ++ C  C + FK    L+EH K   E    ++C  + C   ++TK  LK H  + H
Sbjct: 185 ELHSEVTCSICNRTFKRKSFLKEHKKIHREERIVYRCPRENCDRTYTTKFNLKSHILTFH 244

Query: 292 LNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP 331
            N+R F C    CGK+F   + L  H   H+  K K   P
Sbjct: 245 ENLRPFVCEHEGCGKTFAMKQSLDRHFNTHDPEKKKMVKP 284

Interacts with the internal control region (ICR) of approximately 50 bases within the 5S RNA genes, is required for correct transcription of these genes by RNA polymerase III. Also binds the transcribed 5S RNA's.

Anaxyrus americanus (taxid: 8389)

>sp|Q8VHT8|TF3A_RAT Transcription factor IIIA OS=Rattus norvegicus GN=Gtf3a PE=2 SV=2

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 22/306 (7%)

Query: 49  AITEALQSLGINKEYFISSTGGKNSKKQQLWS---CPIVNCNFTSVNLNTFKIHLLKHFD 105
           ++ EA+ SL I  + F+ +  G    +  L S   C   +C+ +         HL KH  
Sbjct: 6   SVAEAVSSLTI-ADAFVRACVGPAPPRPALPSRFICSFPDCSASYNKAWKLDAHLCKHTG 64

Query: 106 KRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMH 165
           +RPF C         C   F   + L RH+  H  +K  + C    CN++F+T SNLK H
Sbjct: 65  ERPFVCDYEG-----CGKAFIRDYHLSRHILIHTGEKP-FVCADNGCNQKFSTKSNLKKH 118

Query: 166 MVR-HGKPL-TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASL 223
           + R H  P     C   GC + F+  +Q  TH  +H+N    + C ++GCGK F   + L
Sbjct: 119 IERKHENPQKQYVCNFEGCKKAFKKHQQLRTHQCQHTNEPL-FRCTHEGCGKHFASPSRL 177

Query: 224 KSHQRVHVTNPEDLVC-KGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSA 282
           K H +VH    E  +C KGC    K    L +H +  H+  +   CT   C+ +F  K  
Sbjct: 178 KRHGKVH----EGYLCQKGCSFVGKTWTELLKHTREAHK--EEVTCTV--CQKMFKRKDH 229

Query: 283 LKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAK 342
           LK+H K+      ++ CP   C +++    +LQ H+L  +E K  F C +  C  ++  K
Sbjct: 230 LKQHMKTHAPERDVYRCPREGCARTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMK 289

Query: 343 SSLYAH 348
            SL  H
Sbjct: 290 QSLMRH 295

Interacts with the internal control region (ICR) of approximately 50 bases within the 5S RNA genes, is required for correct transcription of these genes by RNA polymerase III. Also binds the transcribed 5S RNA's. May initiate transcription of the 5S ribosomal RNA gene and maintain the stability of transcription of other genes.

Rattus norvegicus (taxid: 10116)

>sp|P03001|TF3A_XENLA Transcription factor IIIA OS=Xenopus laevis GN=gtf3a PE=1 SV=2

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 121/283 (42%), Gaps = 37/283 (13%)

Query: 79  WSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH 138
           + C   +C          + HL KH  ++PF CK        C  GF S H L RH  +H
Sbjct: 35  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCK-----EEGCEKGFTSLHHLTRHSLTH 89

Query: 139 DEDKKCYPCDQKNCNKRFTTLSNLKMHMVR--HGKPLTLCCEELGCGRKFQTMKQYSTHL 196
             +K  + CD   C+ RFTT +N+K H  R  + K     C    CG+ F+   Q   H 
Sbjct: 90  TGEKN-FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 148

Query: 197 KEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP---------------------- 234
             H+    PY C ++GC K F L + LK H++VH   P                      
Sbjct: 149 FSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 207

Query: 235 ---EDL-VCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSK 290
              +DL VC  C ++F+    LR+H K   +    + C  DGC   ++T   L+ H +S 
Sbjct: 208 ECHQDLAVCDVCNRKFRHKDYLRDHQKTHEKERTVYLCPRDGCDRSYTTAFNLRSHIQSF 267

Query: 291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF--TCP 331
           H   R F C    CGK F   + L+ H + H+  K K    CP
Sbjct: 268 HEEQRPFVCEHAGCGKCFAMKKSLERHSVVHDPEKRKLKEKCP 310

Acts as both a positive transcription factor for 5S RNA genes and a specific RNA binding protein that complexes with 5S RNA in oocytes to form the 7S ribonucleoprotein storage particle. May play an essential role in the developmental change in 5S RNA gene expression. Interacts with the internal control region (ICR) of approximately 50 bases within the 5S RNA genes, is required for correct transcription of these genes by RNA polymerase III. Also binds the transcribed 5S RNA's.

Xenopus laevis (taxid: 8355)

>sp|P17842|TF3A_XENBO Transcription factor IIIA OS=Xenopus borealis GN=gtf3a PE=2 SV=1

 Score =  112 bits (279), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 125/285 (43%), Gaps = 41/285 (14%)

Query: 79  WSCPIVNCNFTSVNLN-TFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTS 137
           + C   +C   S N N   + HL KH  ++PF CK        C  GF S H L RH  +
Sbjct: 13  YICSFADCG-ASYNKNWKLRAHLCKHTGEKPFPCK-----EEGCDKGFTSLHHLTRHSIT 66

Query: 138 HDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLC---CEELGCGRKFQTMKQYST 194
           H  +K  + CD   C+  FTT +N+K H  R    L LC   C   GC + F+   Q   
Sbjct: 67  HTGEKN-FKCDSDKCDLTFTTKANMKKHFNRFHN-LQLCVYVCHFEGCDKAFKKHNQLKV 124

Query: 195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP-------------------- 234
           H   H+    PY C ++GC KSF + + LK H++VH   P                    
Sbjct: 125 HQFTHTQ-QLPYKCPHEGCDKSFSVPSCLKRHEKVHAGYPCKKDDSCLFVGKTWTLYLKH 183

Query: 235 ------EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNK 288
                 E ++C  C + FK    LR H K   +    + C  DGC+  ++T+  L+ H +
Sbjct: 184 VKECHQEPVMCDECKRTFKHKDYLRNHKKTHKKERTVYCCPRDGCERSYTTEFNLQSHMQ 243

Query: 289 SKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF--TCP 331
           S H   R F C    CGKSF   + L+ H + H+  K K    CP
Sbjct: 244 SFHEEQRPFACEHAECGKSFAMKKSLERHSVVHDPEKRKLKEKCP 288

Interacts with the internal control region (ICR) of approximately 50 bases within the 5S RNA genes, is required for correct transcription of these genes by RNA polymerase III. Also binds the transcribed 5S RNA's.

Xenopus borealis (taxid: 8354)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
328788295	1033	PREDICTED: hypothetical protein LOC10057	0.807	0.280	0.421	3e-57
322788189	1004	hypothetical protein SINV_08318 [Solenop	0.807	0.288	0.424	6e-57
332027659	997	Zinc finger X-linked protein ZXDB [Acrom	0.807	0.290	0.424	7e-57
340714417	1026	PREDICTED: hypothetical protein LOC10065	0.807	0.282	0.418	2e-56
350399130	1026	PREDICTED: hypothetical protein LOC10074	0.807	0.282	0.418	2e-56
307176119	945	Zinc finger X-linked protein ZXDB [Campo	0.807	0.306	0.421	1e-55
383863735	1034	PREDICTED: uncharacterized protein LOC10	0.807	0.280	0.415	5e-55
126336475	1087	PREDICTED: zinc finger protein ZXDC-like	0.729	0.241	0.395	5e-48
427792249	591	Putative zxd family zinc finger c, parti	0.740	0.450	0.382	8e-48
427790989	604	Putative zxd family zinc finger c, parti	0.740	0.440	0.382	9e-48

>gi|328788295|ref|XP_003251098.1| PREDICTED: hypothetical protein LOC100577295 [Apis mellifera]

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/306 (42%), Positives = 172/306 (56%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI  +     +  +N K   +W CP  +CN     L   K HLL H+  
Sbjct: 448 EMVISNALEELGITDDNLQPVSVNENGK---IWLCPRDDCNRQFSKLYALKGHLLAHYGV 504

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K Y C+ + CN+RFTT+ NL  H 
Sbjct: 505 RPFKCDFEG-----CAWAFYSEFKLKRHKETHLK-RKDYVCEVEGCNRRFTTIYNLWSHA 558

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   C  KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 559 KLHSRPNRILCQVPDCQEKFQTKRALELHMKTHDQSHAPYICKHEGCGKRYYSSNALTSH 618

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+ GC+  FS+ S LK
Sbjct: 619 QRCHSYKEVDVKCSWPGCGKVFDKPCRLKAHIRS-HTGCKPYLCTFQGCQWAFSSSSKLK 677

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C + +CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 678 RHQK-KHTNERKFVCDVPSCGKAFMRSEHLKEHRLTHKEGR-YFQCCI--CNAKFSAKSS 733

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 734 LYVHIK 739

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322788189|gb|EFZ13971.1| hypothetical protein SINV_08318 [Solenopsis invicta]

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 170/306 (55%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI  +        ++ K   +W CP   CN     L T K HLL H+  
Sbjct: 422 EIVISNALKELGITDDSLQPLCATEHDK---VWLCPRDGCNRQFGRLYTLKGHLLAHYGI 478

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K Y C+ + CN+RFTT+ NL  H 
Sbjct: 479 RPFKCDFEG-----CTWAFYSEFKLKRHKETHLK-RKDYVCEVEGCNRRFTTVYNLWSHA 532

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   CG KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 533 KLHSRPNRIICQVPDCGEKFQTKRALELHMKSHDQRHAPYVCQHEGCGKRYYSSNALTSH 592

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+  CK  FS+ S LK
Sbjct: 593 QRSHSYKEVDIKCSWLGCGKIFDKPCRLKAHMRS-HTGYKPYPCTFQDCKWAFSSSSKLK 651

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C +  CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 652 RHQK-KHTNERKFVCDVPNCGKAFMRSEHLKEHRLTHTEGR-FFQCFM--CAARFSAKSS 707

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 708 LYVHIK 713

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027659|gb|EGI67727.1| Zinc finger X-linked protein ZXDB [Acromyrmex echinatior]

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 170/306 (55%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI  +        ++ K   +W CP   CN     L T K HLL H+  
Sbjct: 422 EIVISNALEELGITDDSLQPLCATEHDK---VWLCPRDGCNRQFGRLYTLKGHLLAHYGV 478

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K Y C+ + CN+RFTT+ NL  H 
Sbjct: 479 RPFKCDFEG-----CTWAFYSEFKLKRHKETHLK-RKDYVCEVEGCNRRFTTVYNLWSHA 532

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   CG KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 533 KLHNRPNRIVCQVPDCGEKFQTKRALELHMKSHDQRHAPYVCQHEGCGKRYYSSNALTSH 592

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+  CK  FS+ S LK
Sbjct: 593 QRSHSYKEVDIKCSWPGCGKIFDKPCRLKAHMRS-HTGYKPYPCTFQDCKWAFSSSSKLK 651

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C +  CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 652 RHQK-KHTNERKFVCDVPDCGKAFMRSEHLKEHRLTHTEGR-FFQCFV--CDARFSAKSS 707

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 708 LYVHIK 713

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714417|ref|XP_003395725.1| PREDICTED: hypothetical protein LOC100650640 [Bombus terrestris]

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/306 (41%), Positives = 173/306 (56%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI+ +     +  ++ K   +W CP  +CN     L   K HLL H+  
Sbjct: 450 EMVISNALEELGISDDNLQPISVNEHGK---IWLCPRDDCNRQFSKLYALKGHLLAHYGV 506

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K Y C+ + CN+RFTT+ NL  H 
Sbjct: 507 RPFKCDFEG-----CAWAFYSEFKLKRHKETHLK-RKDYVCEVEGCNRRFTTIYNLWSHA 560

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   C  KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 561 KLHTRPNRIVCQVPDCQEKFQTKRALELHMKSHDQSHAPYVCKHEGCGKRYYSSNALTSH 620

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+ GC+  FS+ S LK
Sbjct: 621 QRCHSYKEVDVKCSWPGCGKVFDKPCRLKAHIRS-HTGCKPYLCTFQGCQWAFSSSSKLK 679

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C + +CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 680 RHQK-KHTNERKFVCDIPSCGKAFMRSEHLKEHRLTHKEGR-YFQCFI--CNAKFSAKSS 735

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 736 LYVHIK 741

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399130|ref|XP_003485431.1| PREDICTED: hypothetical protein LOC100745564 [Bombus impatiens]

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/306 (41%), Positives = 173/306 (56%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI+ +     +  ++ K   +W CP  +CN     L   K HLL H+  
Sbjct: 450 EMVISNALEELGISDDNLQPISVNEHGK---IWLCPRDDCNRQFSKLYALKGHLLAHYGV 506

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K Y C+ + CN+RFTT+ NL  H 
Sbjct: 507 RPFKCDFEG-----CAWAFYSEFKLKRHKETHLK-RKDYVCEVEGCNRRFTTIYNLWSHA 560

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   C  KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 561 KLHTRPNRIVCQVPDCQEKFQTKRALELHMKSHDQSHAPYVCKHEGCGKRYYSSNALTSH 620

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+ GC+  FS+ S LK
Sbjct: 621 QRCHSYKEVDVKCSWPGCGKVFDKPCRLKAHIRS-HTGCKPYLCTFQGCQWAFSSSSKLK 679

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C + +CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 680 RHQK-KHTNERKFVCDIPSCGKAFMRSEHLKEHRLTHKEGR-YFQCFI--CNAKFSAKSS 735

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 736 LYVHIK 741

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176119|gb|EFN65817.1| Zinc finger X-linked protein ZXDB [Camponotus floridanus]

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/306 (42%), Positives = 168/306 (54%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI  +        ++ K   +W CP   CN     L T K HLL H+  
Sbjct: 357 EIVISNALEELGITDDSLQPVNVTEHDK---VWLCPRAGCNRQFGRLYTLKGHLLAHYGV 413

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K + C  + CN+RFTT+ NL  H 
Sbjct: 414 RPFKCDFQD-----CTWAFYSEFKLKRHKETHLK-RKDHVCQVEGCNRRFTTVYNLWSHE 467

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   CG KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 468 KLHSRPNRIVCQVPNCGEKFQTKRALELHMKSHDQRHAPYVCQHEGCGKRYYSSNALTSH 527

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+  CK  FS+ S LK
Sbjct: 528 QRSHSYKEVDIKCSWPGCGKVFDKPCRLKAHTRS-HTGCKPYHCTFQDCKWAFSSSSKLK 586

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C    CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 587 RHQK-KHTNERKFMCDAPDCGKAFMRSEHLKEHRLTHKEGR-FFQCFV--CDARFSAKSS 642

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 643 LYVHIK 648

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863735|ref|XP_003707335.1| PREDICTED: uncharacterized protein LOC100877567 [Megachile rotundata]

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/306 (41%), Positives = 171/306 (55%), Gaps = 16/306 (5%)

Query: 47  EDAITEALQSLGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK 106
           E  I+ AL+ LGI  +     +    S++ ++W CP  +C      L   K HLL H+  
Sbjct: 448 EMVISNALEELGITDDNLQPIS---ISEQGKVWLCPRDDCKRQFSKLYALKGHLLAHYGV 504

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           RPFKC         C W F+S+ KL RH  +H + +K Y C ++ CN+RFTT+ NL  H 
Sbjct: 505 RPFKCDFEG-----CAWAFYSEFKLKRHKETHLK-RKDYICKREGCNRRFTTIYNLWSHE 558

Query: 167 VRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
             H +P  + C+   C  KFQT +    H+K H    APY+C ++GCGK +Y   +L SH
Sbjct: 559 KLHSRPNRILCQVPDCQEKFQTKRALELHMKSHDQSHAPYVCKHEGCGKRYYSSNALTSH 618

Query: 227 QRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK 284
           QR H     D+ C   GCGK F  PCRL+ H ++ H   K + CT+ GC+  FS+ S LK
Sbjct: 619 QRCHSYKEIDVKCSWPGCGKVFDKPCRLKAHLRS-HTGCKPYLCTFQGCQWAFSSSSKLK 677

Query: 285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS 344
           RH K KH N R F C +  CGK+F+RSEHL+EH L H E +  F C    C   + AKSS
Sbjct: 678 RHQK-KHTNERKFVCDVPACGKAFMRSEHLKEHRLTHKEGR-YFQCFI--CNAKFSAKSS 733

Query: 345 LYAHLK 350
           LY H+K
Sbjct: 734 LYVHIK 739

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|126336475|ref|XP_001377050.1| PREDICTED: zinc finger protein ZXDC-like [Monodelphis domestica]

 Score =  197 bits (502), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 110/278 (39%), Positives = 148/278 (53%), Gaps = 16/278 (5%)

Query: 78  LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
           ++ CP   C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct: 335 VYHCPEPECPQTFPKKHQLKLHLLSHSSTQGQRPFKCPLDG-----CGWSFTTSYKLKRH 389

Query: 135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
           + SHD+ +  + C    C KRFTT+ NLK HM  H +  T  CE   C  +F T  + + 
Sbjct: 390 LQSHDKLRP-FSCPAGGCGKRFTTVYNLKAHMKGHEQENTFKCEV--CAERFPTHAKLAA 446

Query: 195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
           H + H     PY C++ GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct: 447 HQRSHFEPERPYKCEFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCNKQYDKACRL 506

Query: 253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
           + H ++ H   + F C  DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct: 507 KIHLRS-HTGERPFICDSDGCGWSFTSMSKLLRH-KRKHEDDRRFTCPVEGCGKSFTRAE 564

Query: 313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           HL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 565 HLKGHSVTHLGTKP-FECPVEGCCARFSARSSLYIHSK 601

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427792249|gb|JAA61576.1| Putative zxd family zinc finger c, partial [Rhipicephalus pulchellus]

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 107/280 (38%), Positives = 155/280 (55%), Gaps = 14/280 (5%)

Query: 73  SKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLL 132
           S  ++ + C +  C+         ++HLL H   RPFKC +       C W F +++KL 
Sbjct: 163 SAPRRRFPCTLEGCDRVFERGRQLRVHLLSHAACRPFKCAVDG-----CDWAFATEYKLK 217

Query: 133 RHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQY 192
           RH+ +H E KK + CD + C + FTT+ NL+ HM  HG+P+   C   GC + F T ++ 
Sbjct: 218 RHLETH-EGKKDFMCDVEGCGQHFTTVYNLRAHMKLHGRPM-FGCPSPGCSQVFGTRRKM 275

Query: 193 STHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFKVPC 250
             HL+EH  + APY C  +GCGK++Y   +L SH RVH   PE+L C    CG+ F   C
Sbjct: 276 ELHLREHQELDAPYRCTEEGCGKAYYSSNTLASHLRVHQHRPEELCCPFPECGRAFGRAC 335

Query: 251 RLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLR 310
           +LR H +  H   + + C+   C   F++ S L RH + KH   R + CP   CGK+F+R
Sbjct: 336 KLRLHLRQ-HTGERPYACS--SCSWTFASASKLTRHMR-KHTGDRRYVCPEPGCGKAFMR 391

Query: 311 SEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
            EHL+ H + H+  +P F C +  C   + AKSSLY HLK
Sbjct: 392 PEHLRGHSVVHSGGRP-FACTHPGCSSRFAAKSSLYVHLK 430

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427790989|gb|JAA60946.1| Putative zxd family zinc finger c, partial [Rhipicephalus pulchellus]

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 107/280 (38%), Positives = 155/280 (55%), Gaps = 14/280 (5%)

Query: 73  SKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLL 132
           S  ++ + C +  C+         ++HLL H   RPFKC +       C W F +++KL 
Sbjct: 163 SAPRRRFPCTLEGCDRVFERGRQLRVHLLSHAACRPFKCAVDG-----CDWAFATEYKLK 217

Query: 133 RHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQY 192
           RH+ +H E KK + CD + C + FTT+ NL+ HM  HG+P+   C   GC + F T ++ 
Sbjct: 218 RHLETH-EGKKDFMCDVEGCGQHFTTVYNLRAHMKLHGRPM-FGCPSPGCSQVFGTRRKM 275

Query: 193 STHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC--KGCGKQFKVPC 250
             HL+EH  + APY C  +GCGK++Y   +L SH RVH   PE+L C    CG+ F   C
Sbjct: 276 ELHLREHQELDAPYRCTEEGCGKAYYSSNTLASHLRVHQHRPEELCCPFPECGRAFGRAC 335

Query: 251 RLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLR 310
           +LR H +  H   + + C+   C   F++ S L RH + KH   R + CP   CGK+F+R
Sbjct: 336 KLRLHLRQ-HTGERPYACS--SCSWTFASASKLTRHMR-KHTGDRRYVCPEPGCGKAFMR 391

Query: 311 SEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
            EHL+ H + H+  +P F C +  C   + AKSSLY HLK
Sbjct: 392 PEHLRGHSVVHSGGRP-FACTHPGCSSRFAAKSSLYVHLK 430

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
RGD|1563355	583	Zxdb "zinc finger, X-linked, d	0.729	0.449	0.399	2.4e-51
RGD|1585677	583	LOC683516 "similar to Zinc fin	0.729	0.449	0.399	2.4e-51
RGD|1585685	583	LOC683508 "similar to Zinc fin	0.729	0.449	0.399	2.4e-51
MGI|MGI:3694898	873	Zxdb "zinc finger, X-linked, d	0.729	0.300	0.399	1.1e-50
UNIPROTKB|E2R2S7	779	ZXDB "Uncharacterized protein"	0.746	0.344	0.389	4.5e-50
UNIPROTKB|F1MWD7	749	ZXDC "Uncharacterized protein"	0.727	0.348	0.389	1e-49
UNIPROTKB|G3MYH0	760	ZXDC "Uncharacterized protein"	0.727	0.343	0.389	1.2e-49
UNIPROTKB|F6XMD6	904	ZXDB "Uncharacterized protein"	0.746	0.296	0.389	1.3e-49
UNIPROTKB|P98169	803	ZXDB "Zinc finger X-linked pro	0.746	0.333	0.389	1.7e-49
UNIPROTKB|G3X7S5	814	ZXDB "Uncharacterized protein"	0.746	0.329	0.389	1.9e-49

RGD|1563355 Zxdb "zinc finger, X-linked, duplicated B" [Rattus norvegicus (taxid:10116)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 111/278 (39%), Positives = 149/278 (53%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L+      C W F + +KL RH
Sbjct:    46 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSG-----CGWTFTTSYKLKRH 100

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + ST
Sbjct:   101 LQSHDKLRP-FGCPVEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLST 157

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   158 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFACSFPGCSKQYDKACRL 217

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   218 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFTCPVEGCGKSFTRAE 275

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
             HL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   276 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1585677 LOC683516 "similar to Zinc finger X-linked protein ZXDB" [Rattus norvegicus (taxid:10116)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 111/278 (39%), Positives = 149/278 (53%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L+      C W F + +KL RH
Sbjct:    46 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSG-----CGWTFTTSYKLKRH 100

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + ST
Sbjct:   101 LQSHDKLRP-FGCPVEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLST 157

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   158 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFACSFPGCSKQYDKACRL 217

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   218 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFTCPVEGCGKSFTRAE 275

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
             HL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   276 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1585685 LOC683508 "similar to Zinc finger X-linked protein ZXDB" [Rattus norvegicus (taxid:10116)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 111/278 (39%), Positives = 149/278 (53%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L+      C W F + +KL RH
Sbjct:    46 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSG-----CGWTFTTSYKLKRH 100

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + ST
Sbjct:   101 LQSHDKLRP-FGCPVEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLST 157

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   158 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFACSFPGCSKQYDKACRL 217

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   218 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFTCPVEGCGKSFTRAE 275

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
             HL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   276 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:3694898 Zxdb "zinc finger, X-linked, duplicated B" [Mus musculus (taxid:10090)]

 Score = 533 (192.7 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 111/278 (39%), Positives = 149/278 (53%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L+      C W F + +KL RH
Sbjct:   339 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSG-----CGWTFTTSYKLKRH 393

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + ST
Sbjct:   394 LQSHDKLRP-FGCPVQGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLST 450

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   451 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFACSFPGCSKQYDKACRL 510

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   511 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFTCPVEGCGKSFTRAE 568

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
             HL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   569 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 605

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2R2S7 ZXDB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 524 (189.5 bits), Expect = 4.5e-50, P = 4.5e-50
 Identities = 111/285 (38%), Positives = 150/285 (52%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct:   246 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGG-----CGWTFTTSYKLKRH 300

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + S 
Sbjct:   301 LQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSA 357

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   358 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRL 417

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   418 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFMCPVEGCGKSFTRAE 475

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN 356
             HL+ H + H   KP F CP + C   + A+SSLY H K H+   +
Sbjct:   476 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSKKHLQDVD 519

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MWD7 ZXDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 519 (187.8 bits), Expect = 1.0e-49, P = 1.0e-49
 Identities = 108/277 (38%), Positives = 146/277 (52%)

Query:    79 WSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRHM 135
             + CP   C       +  ++HLL H     +RPFKC L       C W F + +KL RH+
Sbjct:    96 YRCPEPQCALAFAKKHQLQVHLLTHGSGQGRRPFKCPLDG-----CGWAFTTSYKLKRHL 150

Query:   136 TSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH 195
              SHD+ +  + C    C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H
Sbjct:   151 QSHDKLRP-FGCPVGGCGKKFTTVYNLKAHMKAHEQESLFKCEV--CAERFPTHAKLSSH 207

Query:   196 LKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLR 253
              + H     PY CD+ GC K+F  +++L SH R H    E   C   GC KQ+   CRL+
Sbjct:   208 QRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLK 267

Query:   254 EHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEH 313
              H ++ H   + F C  D C   F++ S L RH K KH + R FPCP+  CGKSF R+EH
Sbjct:   268 IHLRS-HTGERPFICDSDSCGWTFTSMSKLLRH-KRKHDDDRRFPCPVEGCGKSFTRAEH 325

Query:   314 LQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
             L+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   326 LKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 361

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3MYH0 ZXDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 519 (187.8 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 108/277 (38%), Positives = 146/277 (52%)

Query:    79 WSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRHM 135
             + CP   C       +  ++HLL H     +RPFKC L       C W F + +KL RH+
Sbjct:    97 YRCPEPQCALAFAKKHQLQVHLLTHGSGQGRRPFKCPLDG-----CGWAFTTSYKLKRHL 151

Query:   136 TSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH 195
              SHD+ +  + C    C K+FTT+ NLK HM  H +     CE   C  +F T  + S+H
Sbjct:   152 QSHDKLRP-FGCPVGGCGKKFTTVYNLKAHMKAHEQESLFKCEV--CAERFPTHAKLSSH 208

Query:   196 LKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLR 253
              + H     PY CD+ GC K+F  +++L SH R H    E   C   GC KQ+   CRL+
Sbjct:   209 QRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLK 268

Query:   254 EHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEH 313
              H ++ H   + F C  D C   F++ S L RH K KH + R FPCP+  CGKSF R+EH
Sbjct:   269 IHLRS-HTGERPFICDSDSCGWTFTSMSKLLRH-KRKHDDDRRFPCPVEGCGKSFTRAEH 326

Query:   314 LQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
             L+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   327 LKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 362

GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0030275 "LRR domain binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F6XMD6 ZXDB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 524 (189.5 bits), Expect = 1.3e-49, P = 1.3e-49
 Identities = 111/285 (38%), Positives = 150/285 (52%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct:   371 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGG-----CGWTFTTSYKLKRH 425

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + S 
Sbjct:   426 LQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSA 482

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   483 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRL 542

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   543 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHEDDRRFMCPVEGCGKSFTRAE 600

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN 356
             HL+ H + H   KP F CP + C   + A+SSLY H K H+   +
Sbjct:   601 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSKKHLQDVD 644

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|P98169 ZXDB "Zinc finger X-linked protein ZXDB" [Homo sapiens (taxid:9606)]

 Score = 520 (188.1 bits), Expect = 1.7e-49, P = 1.7e-49
 Identities = 111/285 (38%), Positives = 149/285 (52%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP   C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct:   270 LYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGG-----CGWTFTTSYKLKRH 324

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + S 
Sbjct:   325 LQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEESFPTQAKLSA 381

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   382 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRL 441

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C +DGC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   442 KIHLRS-HTGERPFLCDFDGCGWNFTSMSKLLRH-KRKHDDDRRFMCPVEGCGKSFTRAE 499

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN 356
             HL+ H + H   KP F CP   C   + A+SSLY H K H+   +
Sbjct:   500 HLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSKKHLQDVD 543

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G3X7S5 ZXDB "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 520 (188.1 bits), Expect = 1.9e-49, P = 1.9e-49
 Identities = 111/285 (38%), Positives = 151/285 (52%)

Query:    78 LWSCPIVNCNFTSVNLNTFKIHLLKHFD---KRPFKCKLTTANNTPCMWGFFSKHKLLRH 134
             L+ CP V C  T    +  K+HLL H     +RPFKC L       C W F + +KL RH
Sbjct:   280 LYLCPEVQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGG-----CGWTFTTSYKLKRH 334

Query:   135 MTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYST 194
             + SHD+ +  + C  + C K FTT+ NLK HM  H +  +  CE   C   F T  + S 
Sbjct:   335 LQSHDKLRP-FGCPAEGCGKSFTTVYNLKAHMKGHEQENSFKCEV--CEDTFPTQAKLSA 391

Query:   195 HLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
             H + H     PY C + GC K+F  +++L SH R H    E   C   GC KQ+   CRL
Sbjct:   392 HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRL 451

Query:   253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE 312
             + H ++ H   + F C ++GC   F++ S L RH K KH + R F CP+  CGKSF R+E
Sbjct:   452 KIHLRS-HTGERPFLCDFEGCGWNFTSMSKLLRH-KRKHDDDRRFMCPVEGCGKSFTRAE 509

Query:   313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN 356
             HL+ H + H   KP F CP + C   + A+SSLY H K H+   +
Sbjct:   510 HLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSKKHLQDVD 553

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	359
pfam01756	186	pfam01756, ACOX, Acyl-CoA oxidase	4e-07
cd01150	610	cd01150, AXO, Peroxisomal acyl-CoA oxidase	7e-05

>gnl|CDD|201956 pfam01756, ACOX, Acyl-CoA oxidase

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 1   RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYED---EEDAITEALQSL 57
            + +K   E   +  D + + VLT+LA LY+ W LEKH   F        D I +  + +
Sbjct: 58  LYLLKAFYERINEIADPALKPVLTRLAKLYALWILEKHSGDFLRFGYLSPDQIDQVREQI 117

This is a family of Acyl-CoA oxidases EC:1.3.3.6. Acyl-coA oxidase converts acyl-CoA into trans-2- enoyl-CoA. Length = 186

>gnl|CDD|173839 cd01150, AXO, Peroxisomal acyl-CoA oxidase

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 1   RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYED 45
              +++  E  ++  D S R VL +L  LY+ W LE+H+A F E 
Sbjct: 505 YTVLQRFHESVEEIVDPSVRAVLKRLCDLYALWLLEEHIADFLEG 549

Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. AXO is generally a homodimer, but it has been reported to form a different type of oligomer in yeast. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase acts on straight-chain fatty acids and prostanoids; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase has the greatest activity for 2-methyl branched side chains of bile precursors. Pristanoyl-CoA oxidase, acts on 2-methyl branched fatty acids. AXO has an additional domain, C-terminal to the region with similarity to acyl-CoA dehydrogenases, which is included in this alignment. Length = 610

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
KOG3608|consensus	467		99.97
KOG3608|consensus	467		99.96
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.93
KOG3623|consensus	1007		99.86
KOG3623|consensus	1007		99.85
KOG1074|consensus	958		99.8
KOG3576|consensus	267		99.68
KOG3576|consensus	267		99.61
PHA00733	128	hypothetical protein	99.13
PLN03086	567	PRLI-interacting factor K; Provisional	99.08
PLN03086	567	PRLI-interacting factor K; Provisional	99.07
PHA00733	128	hypothetical protein	99.04
PHA02768	55	hypothetical protein; Provisional	98.83
PHA02768	55	hypothetical protein; Provisional	98.69
KOG3993|consensus	500		98.59
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.59
KOG3993|consensus	500		98.37
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.36
PHA00616	44	hypothetical protein	98.27
PHA00616	44	hypothetical protein	98.23
PHA00732	79	hypothetical protein	98.2
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.14
PHA00732	79	hypothetical protein	98.03
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.99
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.75
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.71
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.69
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.69
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.6
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.53
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.46
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.35
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.34
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.92
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.86
KOG4173|consensus	253		96.69
smart00355	26	ZnF_C2H2 zinc finger.	96.68
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.48
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.35
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.3
smart00355	26	ZnF_C2H2 zinc finger.	96.28
KOG4173|consensus	253		96.27
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.14
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.04
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.99
KOG2231|consensus	669		95.83
COG5048	467	FOG: Zn-finger [General function prediction only]	95.72
KOG2231|consensus	669		95.62
KOG1146|consensus	1406		95.56
KOG1146|consensus	1406		95.24
COG5048	467	FOG: Zn-finger [General function prediction only]	95.23
KOG2482|consensus	423		95.13
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.07
PRK04860	160	hypothetical protein; Provisional	95.05
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.81
PRK04860	160	hypothetical protein; Provisional	94.18
KOG2482|consensus	423		93.7
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.93
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.62
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.66
KOG4377|consensus	480		87.51
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	86.93
KOG2785|consensus	390		85.86
COG4049	65	Uncharacterized protein containing archaeal-type C	85.56
COG4049	65	Uncharacterized protein containing archaeal-type C	84.32
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	83.49
KOG2893|consensus	341		82.55
KOG2785|consensus	390		81.86
KOG2893|consensus	341		81.64

>KOG3608|consensus

Probab=99.97  E-value=4.5e-31  Score=217.82  Aligned_cols=264  Identities=24%  Similarity=0.436  Sum_probs=226.7

Q ss_pred             eeeccCCCCCCcccC-hhHHHhHHhhhC-----------------CCCccccccCC------------CCCccchhhccc
Q psy1773          78 LWSCPIVNCNFTSVN-LNTFKIHLLKHF-----------------DKRPFKCKLTT------------ANNTPCMWGFFS  127 (359)
Q Consensus        78 ~~~C~~~~C~~~~~~-~~~l~~H~~~h~-----------------~~~~~~C~~~~------------~~~~~C~~~f~~  127 (359)
                      .++|.|..|++...+ ...|.+|.-.|-                 +..+-.|++-.            +.|.+|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            589999999998877 578999976552                 11111111111            124679999999


Q ss_pred             HHHHHhhhhhcCC------------CCCccccCCCccchhhcCHHHHHHHHHHhCCCCccccccccchhhcCChHHHHHH
Q psy1773         128 KHKLLRHMTSHDE------------DKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTH  195 (359)
Q Consensus       128 ~~~l~~H~~~~~~------------~~~~~~c~c~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H  195 (359)
                      ...+..|+..|..            ++..+.|.|..|.+.+.+++.|+.|++.|++++...|..  |+..|.++..|..|
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~--Cg~~F~~~tkl~DH  226 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPH--CGELFRTKTKLFDH  226 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecch--HHHHhccccHHHHH
Confidence            9999999877642            225689999999999999999999999999999999999  99999999999999


Q ss_pred             HHHcCC-CCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcC
Q psy1773         196 LKEHSN-VSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCK  274 (359)
Q Consensus       196 ~~~h~~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~  274 (359)
                      .+..+. ...+|.|..  |.|.|.+...|..|+..|.   .-|+|+.|+.+....++|..|++..|+..+||+|  +.|+
T Consensus       227 ~rRqt~l~~n~fqC~~--C~KrFaTeklL~~Hv~rHv---n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKC--d~Cd  299 (467)
T KOG3608|consen  227 LRRQTELNTNSFQCAQ--CFKRFATEKLLKSHVVRHV---NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKC--DECD  299 (467)
T ss_pred             HHhhhhhcCCchHHHH--HHHHHhHHHHHHHHHHHhh---hcccccccccCCCChHHHHHHHHhhhccCCCccc--cchh
Confidence            876542 246899986  9999999999999999994   4599999999999999999999999999999999  4699


Q ss_pred             ccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhc-CC-CCceeccCCCccccccchhhHHHHHhhh
Q psy1773         275 LLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN-EN-KPKFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       275 ~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      +.|.+.+.|.+|.. .|+ +..|.|..+.|..+|.+...+.+|++.++ |. .++|.|-.  |++.|++..+|.+|+...
T Consensus       300 ~~c~~esdL~kH~~-~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~--Cdr~ft~G~~L~~HL~kk  375 (467)
T KOG3608|consen  300 TRCVRESDLAKHVQ-VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHC--CDRFFTSGKSLSAHLMKK  375 (467)
T ss_pred             hhhccHHHHHHHHH-hcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeec--chhhhccchhHHHHHHHh
Confidence            99999999999998 688 67799999899999999999999998877 33 33799999  999999999999999988


Q ss_pred             cC
Q psy1773         353 HS  354 (359)
Q Consensus       353 h~  354 (359)
                      |+
T Consensus       376 H~  377 (467)
T KOG3608|consen  376 HG  377 (467)
T ss_pred             hc
Confidence            85

>KOG3608|consensus

Probab=99.96  E-value=5.2e-29  Score=205.67  Aligned_cols=233  Identities=24%  Similarity=0.478  Sum_probs=205.1

Q ss_pred             CCCCCeeeccCCCCCCcccChhHHHhHHhhhCC------------CCc-cccccCCCCCccchhhcccHHHHHhhhhhcC
Q psy1773          73 SKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFD------------KRP-FKCKLTTANNTPCMWGFFSKHKLLRHMTSHD  139 (359)
Q Consensus        73 ~~~~~~~~C~~~~C~~~~~~~~~l~~H~~~h~~------------~~~-~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~~  139 (359)
                      ......|.|.|-.|+..|.++..|..|+..|..            ++| +.|.+     ..|-+.|.++..|++|+++|+
T Consensus       129 p~~g~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W-----~~Ct~~~~~k~~LreH~r~Hs  203 (467)
T KOG3608|consen  129 PALGQNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNW-----AMCTKHMGNKYRLREHIRTHS  203 (467)
T ss_pred             ccchhhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccc-----hhhhhhhccHHHHHHHHHhcC
Confidence            334677999999999999999999999988852            222 44554     569999999999999999999


Q ss_pred             CCCCccccCCCccchhhcCHHHHHHHHHHh--CCCCccccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccc
Q psy1773         140 EDKKCYPCDQKNCNKRFTTLSNLKMHMVRH--GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSF  217 (359)
Q Consensus       140 ~~~~~~~c~c~~C~~~f~~~~~l~~H~~~h--~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f  217 (359)
                      +++ ...|  +.||..|+++..|..|++..  ....+|.|..  |.+.|.+...|..|+..|.   ..|.|++  |..+.
T Consensus       204 ~eK-vvAC--p~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~--C~KrFaTeklL~~Hv~rHv---n~ykCpl--Cdmtc  273 (467)
T KOG3608|consen  204 NEK-VVAC--PHCGELFRTKTKLFDHLRRQTELNTNSFQCAQ--CFKRFATEKLLKSHVVRHV---NCYKCPL--CDMTC  273 (467)
T ss_pred             CCe-EEec--chHHHHhccccHHHHHHHhhhhhcCCchHHHH--HHHHHhHHHHHHHHHHHhh---hcccccc--cccCC
Confidence            994 4445  59999999999999998864  3456899999  9999999999999999996   4699997  99999


Q ss_pred             cChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCC--c
Q psy1773         218 YLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNM--R  295 (359)
Q Consensus       218 ~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~--~  295 (359)
                      ...++|.+|++.-|...+||+|+.|++.|.+.+.|.+|.. +|+ +..|+|..+.|.++|.+...|++|++.+|.|.  .
T Consensus       274 ~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~  351 (467)
T KOG3608|consen  274 SSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPI  351 (467)
T ss_pred             CChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCC
Confidence            9999999999997788999999999999999999999988 898 77899998899999999999999999888654  4


Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +|.|-.  |++.|++..+|..|++..++-
T Consensus       352 ~Y~CH~--Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  352 LYACHC--CDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             ceeeec--chhhhccchhHHHHHHHhhcc
Confidence            699999  999999999999998776653

>KOG1074|consensus

Probab=99.95  E-value=2.4e-29  Score=228.94  Aligned_cols=196  Identities=22%  Similarity=0.418  Sum_probs=150.6

Q ss_pred             CCccchhhcCHHHHHHHHHHhCCCCccccccccchhhcCChHHHHHHHHHcCCC---CCCcccc---CCCCCccccChHH
Q psy1773         149 QKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV---SAPYMCD---YKGCGKSFYLMAS  222 (359)
Q Consensus       149 c~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~~C~---~~~C~~~f~~~~~  222 (359)
                      |-+|.++.+.++.|+.|+++|++++||+|.+  |++.|.++.+|+.|+-.|...   ..++.|+   +  |-+.|...-.
T Consensus       608 CiiC~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~kftn~V~  683 (958)
T KOG1074|consen  608 CIICLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQKKFTNAVT  683 (958)
T ss_pred             eeeeeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhh--hccccccccc
Confidence            8889999999999999999999999999999  999999999999999888641   2457888   7  9999999999


Q ss_pred             HHHHhhhhcCCCCc------------cccCCcCccCCChHHHHHHHHHHcc----------------CCC----cccccc
Q psy1773         223 LKSHQRVHVTNPED------------LVCKGCGKQFKVPCRLREHYKAVHE----------------STK----NFKCTY  270 (359)
Q Consensus       223 l~~H~~~h~~~~~~------------~~C~~C~~~f~~~~~l~~H~~~~H~----------------~~~----~~~C~~  270 (359)
                      |..|+++|.++..+            -.|..|.+.|.....+..++. .|.                ++.    +..+- 
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~s-e~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~-  761 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQIS-EQPSPESEPDEQMDERTETEELDVTPPPPEN-  761 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhh-ccCCcccCCcccccccccccccccCCCcccc-
Confidence            99999998533222            468899999988888877765 341                111    22232 


Q ss_pred             CCcCccccChHhhhcccccc----------------------ccC-----------------------------------
Q psy1773         271 DGCKLLFSTKSALKRHNKSK----------------------HLN-----------------------------------  293 (359)
Q Consensus       271 ~~C~~~f~~~~~l~~H~~~~----------------------H~~-----------------------------------  293 (359)
                       .|+..+.....+..+-...                      +++                                   
T Consensus       762 -~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg  840 (958)
T KOG1074|consen  762 -SCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEG  840 (958)
T ss_pred             -ccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccc
Confidence             2555544433333222110                      000                                   


Q ss_pred             ------------------------------------CcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccc
Q psy1773         294 ------------------------------------MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLM  337 (359)
Q Consensus       294 ------------------------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~  337 (359)
                                                          .....|.+  |++.|...++|..|+|+|+++| ||.|.+  |++
T Consensus       841 ~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~v--Cgk~FsSSsALqiH~rTHtg~K-PF~C~f--C~~  915 (958)
T KOG1074|consen  841 LATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNV--CGKQFSSSAALEIHMRTHTGPK-PFFCHF--CEE  915 (958)
T ss_pred             cccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhcc--chhcccchHHHHHhhhcCCCCC-Cccchh--hhh
Confidence                                                01166998  9999999999999999999999 699999  999


Q ss_pred             cccchhhHHHHHhhhcCCC
Q psy1773         338 SYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       338 ~f~~~~~l~~H~~~hh~~~  356 (359)
                      .|..+.+|+.||.+|+..+
T Consensus       916 aFttrgnLKvHMgtH~w~q  934 (958)
T KOG1074|consen  916 AFTTRGNLKVHMGTHMWVQ  934 (958)
T ss_pred             hhhhhhhhhhhhccccccC
Confidence            9999999999999998654

>KOG2462|consensus

Probab=99.95  E-value=2.2e-28  Score=197.14  Aligned_cols=136  Identities=33%  Similarity=0.640  Sum_probs=123.1

Q ss_pred             CCCccccCCCCCccccChHHHHHHhhhhcC--CCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccCh
Q psy1773         203 SAPYMCDYKGCGKSFYLMASLKSHQRVHVT--NPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTK  280 (359)
Q Consensus       203 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~  280 (359)
                      ...|.|+  +||+.+.+.++|.+|..+|-.  ..+.+.|+.|+|+|.+...|..|++ +|+  -+++|.+  ||+.|..+
T Consensus       128 ~~r~~c~--eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHir-TH~--l~c~C~i--CGKaFSRP  200 (279)
T KOG2462|consen  128 HPRYKCP--ECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIR-THT--LPCECGI--CGKAFSRP  200 (279)
T ss_pred             CCceecc--ccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhh-ccC--CCccccc--ccccccch
Confidence            4558887  599999999999999999842  3467999999999999999999988 786  6789987  99999999


Q ss_pred             HhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhh
Q psy1773         281 SALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       281 ~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      +-|+.|+| .|+|++||.|+.  |++.|.++++|+.||++|.+.| +|.|..  |+++|..++.|.+|...
T Consensus       201 WLLQGHiR-THTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K-~~qC~~--C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  201 WLLQGHIR-THTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVK-KHQCPR--CGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHhhcccc-cccCCCCccCCc--ccchhcchHHHHHHHHhhcCCc-cccCcc--hhhHHHHHHHHHHhhhh
Confidence            99999999 699999999998  9999999999999999999999 799999  99999999999999753

>KOG2462|consensus

Probab=99.93  E-value=8.5e-27  Score=187.98  Aligned_cols=133  Identities=35%  Similarity=0.707  Sum_probs=106.9

Q ss_pred             cccccccchhhcCChHHHHHHHHHcCC--CCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHH
Q psy1773         175 LCCEELGCGRKFQTMKQYSTHLKEHSN--VSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRL  252 (359)
Q Consensus       175 ~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l  252 (359)
                      |.|..  |++.+.+..+|.+|..+|..  ..+.+.|.+  |++.+.+...|..|+++|.   -+++|.+|||.|.....|
T Consensus       131 ~~c~e--Cgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~---l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  131 YKCPE--CGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT---LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             eeccc--cccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC---CCcccccccccccchHHh
Confidence            55555  55555555555555555532  145688886  9999999999999999992   578899999999999999


Q ss_pred             HHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHh
Q psy1773         253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQ  320 (359)
Q Consensus       253 ~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  320 (359)
                      +-|++ .|+|||||.|+.  |+++|..+++|+.||+ .|.+.++|+|..  |+|+|...+-|.+|...
T Consensus       204 QGHiR-THTGEKPF~C~h--C~kAFADRSNLRAHmQ-THS~~K~~qC~~--C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  204 QGHIR-THTGEKPFSCPH--CGKAFADRSNLRAHMQ-THSDVKKHQCPR--CGKSFALKSYLNKHSES  265 (279)
T ss_pred             hcccc-cccCCCCccCCc--ccchhcchHHHHHHHH-hhcCCccccCcc--hhhHHHHHHHHHHhhhh
Confidence            99988 899999999976  9999999999999998 599999999988  99999999999998654

>KOG3623|consensus

Probab=99.86  E-value=5.6e-22  Score=178.39  Aligned_cols=112  Identities=29%  Similarity=0.556  Sum_probs=95.0

Q ss_pred             CCeeeccCCCCCCcccChhHHHhHHhh-h-CCCCccccccCCCCCccchhhcccHHHHHhhhhhcCCCCC----------
Q psy1773          76 QQLWSCPIVNCNFTSVNLNTFKIHLLK-H-FDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKK----------  143 (359)
Q Consensus        76 ~~~~~C~~~~C~~~~~~~~~l~~H~~~-h-~~~~~~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~~----------  143 (359)
                      .....|+  .|...++....|+.|++- | ..+.-|.|.+       |.++|..+..|.+||.+|.....          
T Consensus       208 sqlltcp--ycdrgykrltslkeHikyrhekne~nfsC~l-------CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~  278 (1007)
T KOG3623|consen  208 SQLLTCP--YCDRGYKRLTSLKEHIKYRHEKNEPNFSCML-------CSYTFAYRTQLERHMQLHKPGGDQAISLTQSAL  278 (1007)
T ss_pred             hhhhcch--hHHHHHHHHHHHHHHHHHHHhhCCCCCcchh-------hhhhhhhHHHHHHHHHhhcCCCcccccccchhh
Confidence            4567899  799999999999999874 3 3466699999       99999999999999998864321          


Q ss_pred             ccccCCCccchhhcCHHHHHHHHHHhCCCCccccccccchhhcCChHHHHHHHHH
Q psy1773         144 CYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKE  198 (359)
Q Consensus       144 ~~~c~c~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  198 (359)
                      ..++.|.+|||.|..+..|+.|+++|.|++||.|..  |.+.|.....+-.|+..
T Consensus       279 lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpn--CkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  279 LRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPN--CKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hccccccccchhhhhHHHHHhhheeecCCCCcCCcc--cccccccCCcccccccc
Confidence            123334499999999999999999999999999999  99999999999999854

>KOG3623|consensus

Probab=99.85  E-value=4.4e-22  Score=179.05  Aligned_cols=80  Identities=33%  Similarity=0.679  Sum_probs=75.2

Q ss_pred             CccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchh
Q psy1773         264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKS  343 (359)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~  343 (359)
                      .+|.|.  .|+++|...++|.+|.- .|+|.+||+|.+  |.|.|+.+-.|..|+|.|.|+| ||+|..  |+++|....
T Consensus       893 gmyaCD--qCDK~FqKqSSLaRHKY-EHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEK-PfQCdK--ClKRFSHSG  964 (1007)
T KOG3623|consen  893 GMYACD--QCDKAFQKQSSLARHKY-EHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEK-PFQCDK--CLKRFSHSG  964 (1007)
T ss_pred             ccchHH--HHHHHHHhhHHHHHhhh-hhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCC-cchhhh--hhhhccccc
Confidence            468995  59999999999999988 799999999999  9999999999999999999999 799999  999999999


Q ss_pred             hHHHHHhh
Q psy1773         344 SLYAHLKH  351 (359)
Q Consensus       344 ~l~~H~~~  351 (359)
                      ++.+||..
T Consensus       965 SYSQHMNH  972 (1007)
T KOG3623|consen  965 SYSQHMNH  972 (1007)
T ss_pred             chHhhhcc
Confidence            99999863

>KOG1074|consensus

Probab=99.80  E-value=2e-20  Score=171.33  Aligned_cols=244  Identities=23%  Similarity=0.374  Sum_probs=175.4

Q ss_pred             eeeCCCCCCCCCCCeeeccCCCCCCcccChhHHHhHHhhhCCCCccccccCCCCCccchhhcccHHHHHhhhhhcCCCCC
Q psy1773          64 FISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKK  143 (359)
Q Consensus        64 ~~~~~~~~~~~~~~~~~C~~~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~~  143 (359)
                      ..+.++........+-+|.  .|.++.+-.+.|+.|+++|+|++||+|++       |++.|.++.+|+.||..|... .
T Consensus       591 l~slv~~~~~~~TdPNqCi--iC~rVlSC~saLqmHyrtHtGERPFkCKi-------CgRAFtTkGNLkaH~~vHka~-p  660 (958)
T KOG1074|consen  591 LTSLVENSENKRTDPNQCI--ICLRVLSCPSALQMHYRTHTGERPFKCKI-------CGRAFTTKGNLKAHMSVHKAK-P  660 (958)
T ss_pred             ccccccccccccCCcccee--eeeecccchhhhhhhhhcccCcCcccccc-------ccchhccccchhhcccccccC-c
Confidence            3344444455667788999  59999999999999999999999999999       999999999999999998765 2


Q ss_pred             c--cccCCC---ccchhhcCHHHHHHHHHHhCCCC-------------ccccccccchhhcCChHHHHHHHHHcCCC---
Q psy1773         144 C--YPCDQK---NCNKRFTTLSNLKMHMVRHGKPL-------------TLCCEELGCGRKFQTMKQYSTHLKEHSNV---  202 (359)
Q Consensus       144 ~--~~c~c~---~C~~~f~~~~~l~~H~~~h~~~~-------------~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---  202 (359)
                      +  ....|+   +|.+.|...-.|..|+++|.+..             .-+|..  |.+.|.....+..++..+.+.   
T Consensus       661 ~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~--~qk~~~~a~~f~~~~se~~~~~s~  738 (958)
T KOG1074|consen  661 PARVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSS--CQKTFSDARSFSQQISEQPSPESE  738 (958)
T ss_pred             cccccccCCchhhhcccccccccccceEEeecCCCCCCCcccccccchhcccch--hhhcccccccchhhhhccCCcccC
Confidence            2  244577   89999999999999999987321             246777  999998888888888776320   


Q ss_pred             ------------CC----CccccCCCCCccccChHHHHHHhhhh----------------------cCCCCcc-ccCCcC
Q psy1773         203 ------------SA----PYMCDYKGCGKSFYLMASLKSHQRVH----------------------VTNPEDL-VCKGCG  243 (359)
Q Consensus       203 ------------~~----~~~C~~~~C~~~f~~~~~l~~H~~~h----------------------~~~~~~~-~C~~C~  243 (359)
                                  +.    +..+..  |+..+.....+..+-..+                      ...+++. .+.+++
T Consensus       739 ~~~~~~~~t~t~~~~~tp~~~e~~--~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~  816 (958)
T KOG1074|consen  739 PDEQMDERTETEELDVTPPPPENS--CGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPG  816 (958)
T ss_pred             CcccccccccccccccCCCccccc--cccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCC
Confidence                        11    344443  776666554443332111                      0223444 566655


Q ss_pred             ccCCChHH----HHHHHH-------------HHccC------------------------CCccccccCCcCccccChHh
Q psy1773         244 KQFKVPCR----LREHYK-------------AVHES------------------------TKNFKCTYDGCKLLFSTKSA  282 (359)
Q Consensus       244 ~~f~~~~~----l~~H~~-------------~~H~~------------------------~~~~~C~~~~C~~~f~~~~~  282 (359)
                      ......-.    |..-..             ..+.+                        .....|.+  |++.|.+.++
T Consensus       817 ~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~v--Cgk~FsSSsA  894 (958)
T KOG1074|consen  817 EILAPSVNMDPVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNV--CGKQFSSSAA  894 (958)
T ss_pred             cCCccccccCchhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhcc--chhcccchHH
Confidence            43322110    000000             00000                        01267987  9999999999


Q ss_pred             hhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCC
Q psy1773         283 LKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP  326 (359)
Q Consensus       283 l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  326 (359)
                      |..|++ .|++++||.|.+  |++.|..+..|+.||.+|....+
T Consensus       895 LqiH~r-THtg~KPF~C~f--C~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  895 LEIHMR-THTGPKPFFCHF--CEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             HHHhhh-cCCCCCCccchh--hhhhhhhhhhhhhhhccccccCC
Confidence            999999 699999999999  99999999999999999987763

>KOG3576|consensus

Probab=99.68  E-value=1.7e-17  Score=127.41  Aligned_cols=114  Identities=30%  Similarity=0.604  Sum_probs=90.1

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHH
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEH  313 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~  313 (359)
                      ...|.|.+|+|.|.....|.+|++ -|...+.|-|..  ||+.|...-.|++|++ .|+|.+||+|..  |+++|..+-+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~--cgkgfndtfdlkrh~r-thtgvrpykc~~--c~kaftqrcs  188 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTF--CGKGFNDTFDLKRHTR-THTGVRPYKCSL--CEKAFTQRCS  188 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhh--ccCcccchhhhhhhhc-cccCccccchhh--hhHHHHhhcc
Confidence            355788888888888888888877 788888888876  8888888888888888 588888888887  8888888888


Q ss_pred             HHHHHHhhcCCC----------CceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         314 LQEHMLQHNENK----------PKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       314 l~~H~~~h~~~~----------~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      |..|++..+|..          +.|.|+.  ||..-.....+..|++.||+.
T Consensus       189 leshl~kvhgv~~~yaykerr~kl~vced--cg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  189 LESHLKKVHGVQHQYAYKERRAKLYVCED--CGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHHHHHHcCchHHHHHHHhhhheeeecc--cCCCCCChhHHHHHHHhcCCC
Confidence            888876655421          1588887  888888888888888888865

>KOG3576|consensus

Probab=99.61  E-value=1.4e-16  Score=122.50  Aligned_cols=112  Identities=29%  Similarity=0.612  Sum_probs=56.7

Q ss_pred             ccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhc
Q psy1773         206 YMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKR  285 (359)
Q Consensus       206 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~  285 (359)
                      |.|.+  |++.|.....|.+|++.| ...+.+.|..||+.|.....|++|++ +|+|.+||+|..  |+++|+.+-+|..
T Consensus       118 ftCrv--CgK~F~lQRmlnrh~kch-~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~--c~kaftqrcsles  191 (267)
T KOG3576|consen  118 FTCRV--CGKKFGLQRMLNRHLKCH-SDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSL--CEKAFTQRCSLES  191 (267)
T ss_pred             eeeeh--hhhhhhHHHHHHHHhhhc-cHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhh--hhHHHHhhccHHH
Confidence            44443  444444444444444444 23344444444444444444444444 444444444433  4444444444444


Q ss_pred             ccccccc----------CCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         286 HNKSKHL----------NMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       286 H~~~~H~----------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      |++.+|.          ..+.|.|..  ||.+-.....+..|+..|+..-
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vced--cg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCED--CGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecc--cCCCCCChhHHHHHHHhcCCCC
Confidence            4444443          234566766  7777777777777777666544

>PHA00733 hypothetical protein

Probab=99.13  E-value=6.7e-11  Score=88.34  Aligned_cols=81  Identities=22%  Similarity=0.363  Sum_probs=55.3

Q ss_pred             CccccccCCcCccccChHhhhcc------ccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccc
Q psy1773         264 KNFKCTYDGCKLLFSTKSALKRH------NKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLM  337 (359)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H------~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~  337 (359)
                      +++.|.+  |+..|..+..|..+      +.  +.+.+||.|+.  |++.|.+...|..|++.|  +. +|.|+.  |++
T Consensus        39 ~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~--~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~-~~~C~~--CgK  107 (128)
T PHA00733         39 KRLIRAV--VKTLIYNPQLLDESSYLYKLLT--SKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EH-SKVCPV--CGK  107 (128)
T ss_pred             hhHHHHH--HhhhccChhhhcchHHHHhhcc--cCCCCCccCCC--CCCcCCCHHHHHHHHhcC--Cc-CccCCC--CCC
Confidence            4455554  55555554444333      22  33467788887  888888888888888776  23 588887  888


Q ss_pred             cccchhhHHHHHhhhcCC
Q psy1773         338 SYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       338 ~f~~~~~l~~H~~~hh~~  355 (359)
                      +|.....|.+|+...|+.
T Consensus       108 ~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        108 EFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             ccCCHHHHHHHHHHhcCc
Confidence            888888888888887764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.08  E-value=7.1e-10  Score=101.71  Aligned_cols=98  Identities=23%  Similarity=0.494  Sum_probs=44.3

Q ss_pred             ccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCC--------
Q psy1773         176 CCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFK--------  247 (359)
Q Consensus       176 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~--------  247 (359)
                      .|+.  |++.|. ...|..|+..++   .++.|+   ||+.+ .+..|..|+.+| ...+++.|..|++.|.        
T Consensus       455 ~C~~--Cgk~f~-~s~LekH~~~~H---kpv~Cp---Cg~~~-~R~~L~~H~~th-Cp~Kpi~C~fC~~~v~~g~~~~d~  523 (567)
T PLN03086        455 HCEK--CGQAFQ-QGEMEKHMKVFH---EPLQCP---CGVVL-EKEQMVQHQAST-CPLRLITCRFCGDMVQAGGSAMDV  523 (567)
T ss_pred             cCCC--CCCccc-hHHHHHHHHhcC---CCccCC---CCCCc-chhHHHhhhhcc-CCCCceeCCCCCCccccCccccch
Confidence            4444  555443 344455555443   345553   55433 334555555544 2234555555555542        


Q ss_pred             --ChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccc
Q psy1773         248 --VPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKS  289 (359)
Q Consensus       248 --~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  289 (359)
                        ..+.|..|.. .+ |.+++.|..  ||+.+..+ .|..|+..
T Consensus       524 ~d~~s~Lt~HE~-~C-G~rt~~C~~--Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        524 RDRLRGMSEHES-IC-GSRTAPCDS--CGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             hhhhhhHHHHHH-hc-CCcceEccc--cCCeeeeh-hHHHHHHH
Confidence              1234555543 22 455555533  55554433 34444433

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.07  E-value=5.2e-10  Score=102.60  Aligned_cols=149  Identities=23%  Similarity=0.515  Sum_probs=105.8

Q ss_pred             cccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHH
Q psy1773         175 LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLRE  254 (359)
Q Consensus       175 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~  254 (359)
                      -.|..  |..... ...|..|...-.  .....|+...|+..|.. ..+.          ..+.|+.|++.|. ...|..
T Consensus       408 V~C~N--C~~~i~-l~~l~lHe~~C~--r~~V~Cp~~~Cg~v~~r-~el~----------~H~~C~~Cgk~f~-~s~Lek  470 (567)
T PLN03086        408 VECRN--CKHYIP-SRSIALHEAYCS--RHNVVCPHDGCGIVLRV-EEAK----------NHVHCEKCGQAFQ-QGEMEK  470 (567)
T ss_pred             EECCC--CCCccc-hhHHHHHHhhCC--CcceeCCcccccceeec-cccc----------cCccCCCCCCccc-hHHHHH
Confidence            35666  666544 344456664432  23455753348888733 2223          3357999999986 677899


Q ss_pred             HHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccC----------ChHHHHHHHHhhcCC
Q psy1773         255 HYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFL----------RSEHLQEHMLQHNEN  324 (359)
Q Consensus       255 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~----------~~~~l~~H~~~h~~~  324 (359)
                      |++ +|.  +++.|+   |+..+ .+..|..|+. .|.+.+++.|+.  |++.|.          ..+.|..|..+. |.
T Consensus       471 H~~-~~H--kpv~Cp---Cg~~~-~R~~L~~H~~-thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~  539 (567)
T PLN03086        471 HMK-VFH--EPLQCP---CGVVL-EKEQMVQHQA-STCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GS  539 (567)
T ss_pred             HHH-hcC--CCccCC---CCCCc-chhHHHhhhh-ccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CC
Confidence            987 553  789995   98655 6688999987 688999999998  999885          245789998885 77


Q ss_pred             CCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         325 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       325 ~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      + ++.|..  ||+.+..+ .|..|+...|..
T Consensus       540 r-t~~C~~--Cgk~Vrlr-dm~~H~~~~h~~  566 (567)
T PLN03086        540 R-TAPCDS--CGRSVMLK-EMDIHQIAVHQK  566 (567)
T ss_pred             c-ceEccc--cCCeeeeh-hHHHHHHHhhcC
Confidence            7 699988  99988765 478888887764

>PHA00733 hypothetical protein

Probab=99.04  E-value=2.7e-10  Score=85.09  Aligned_cols=84  Identities=21%  Similarity=0.424  Sum_probs=64.2

Q ss_pred             CCCccccCCcCccCCChHHHHHH--HH--HHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCccc
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREH--YK--AVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSF  308 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H--~~--~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f  308 (359)
                      ..+++.|.+|...|.....|..+  +.  ..+.+.+||.|+.  |++.|.+...|..|++ .|  ..+|.|+.  |++.|
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r-~h--~~~~~C~~--CgK~F  109 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIR-YT--EHSKVCPV--CGKEF  109 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHh-cC--CcCccCCC--CCCcc
Confidence            35678888888888777666655  11  1234578899965  9999999999999988 35  35689988  99999


Q ss_pred             CChHHHHHHHHhhcC
Q psy1773         309 LRSEHLQEHMLQHNE  323 (359)
Q Consensus       309 ~~~~~l~~H~~~h~~  323 (359)
                      .....|..|+...++
T Consensus       110 ~~~~sL~~H~~~~h~  124 (128)
T PHA00733        110 RNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCHHHHHHHHHHhcC
Confidence            999999999887765

>PHA02768 hypothetical protein; Provisional

Probab=98.83  E-value=2e-09  Score=65.78  Aligned_cols=44  Identities=18%  Similarity=0.579  Sum_probs=37.8

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHH
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLY  346 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~  346 (359)
                      .|.|+.  ||+.|+..++|..|+++|+  + +|.|..  |++.|...+.|.
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k-~~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--T-NLKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--C-cccCCc--ccceecccceeE
Confidence            488988  9999999999999999998  4 689988  999998877664

>PHA02768 hypothetical protein; Provisional

Probab=98.69  E-value=1e-08  Score=62.70  Aligned_cols=43  Identities=21%  Similarity=0.387  Sum_probs=29.5

Q ss_pred             cccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhh
Q psy1773         237 LVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALK  284 (359)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~  284 (359)
                      |.|+.||+.|...+.|..|++ +|+  ++|+|..  |++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r-~H~--k~~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLR-KHN--TNLKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHH-hcC--CcccCCc--ccceecccceeE
Confidence            667777777777777777766 566  5677754  777777666554

>KOG3993|consensus

Probab=98.59  E-value=1.3e-08  Score=87.68  Aligned_cols=199  Identities=17%  Similarity=0.235  Sum_probs=114.4

Q ss_pred             cccCCCccchhhcCHHHHHHHHHHhCCCCccccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccccChHHHH
Q psy1773         145 YPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLK  224 (359)
Q Consensus       145 ~~c~c~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~  224 (359)
                      |.|.  .|...|.+.-.|.+|.-.-.-...|+|.+  |++.|.-..+|..|.+.|......-.-..+.=.+...+....+
T Consensus       268 yiCq--LCK~kYeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  268 YICQ--LCKEKYEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHH--HHHHhhhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            4555  78888888888888854333334588888  8888888888888888875311100000000000000000111


Q ss_pred             HHhhh-hcCCCCccccCCcCccCCChHHHHHHHHHHccCCCc----------------cccccCCcCccccChHhhhccc
Q psy1773         225 SHQRV-HVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKN----------------FKCTYDGCKLLFSTKSALKRHN  287 (359)
Q Consensus       225 ~H~~~-h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~----------------~~C~~~~C~~~f~~~~~l~~H~  287 (359)
                      .-.+. -......|.|..|++.|.....|+.|..+.|.....                +.|.  .|+-.+.....--.+.
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~--~~a~h~~a~~~~g~~v  421 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQ--AVATHSSASDSHGDEV  421 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhccccccccc--ccccccccccccccce
Confidence            11100 001224689999999999999999997633332211                2232  2443333333222222


Q ss_pred             cccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         288 KSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       288 ~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      ..+-.....-.|+.  |+..+.++..--.+.+.-..+. .|.|.+  |...|.+...|.+|+..-|.
T Consensus       422 l~~a~sael~~pp~--~~~ppsss~~sgg~~rlg~~~q-~f~~ky--~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  422 LYVAGSAELELPPY--DGSPPSSSGSSGGYGRLGIAEQ-GFTCKY--CPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             eeeeccccccCCCC--CCCCcccCCCCCccccccchhh-cccccc--chHhhhcCcchHhHhhhcCh
Confidence            21111122345777  8877777766666666555666 699999  99999999999999887764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.59  E-value=4.2e-08  Score=51.11  Aligned_cols=26  Identities=38%  Similarity=0.874  Sum_probs=22.1

Q ss_pred             HHHHHHHhhcCCCCceeccCCCccccccc
Q psy1773         313 HLQEHMLQHNENKPKFTCPYQDCLMSYVA  341 (359)
Q Consensus       313 ~l~~H~~~h~~~~~~~~C~~~~C~~~f~~  341 (359)
                      +|.+|+++|++++ ||.|+.  |+++|.+
T Consensus         1 ~l~~H~~~H~~~k-~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEK-PYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSS-SEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCC-CCCCCC--CcCeeCc
Confidence            5788999999998 699988  9998863

...

>KOG3993|consensus

Probab=98.37  E-value=4.3e-08  Score=84.53  Aligned_cols=197  Identities=19%  Similarity=0.246  Sum_probs=111.9

Q ss_pred             ccccccCCCCCccchhhcccHHHHHhhhhhcCCCCCccccCCCccchhhcCHHHHHHHHHHhCCCCccc-cccccchhhc
Q psy1773         108 PFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLC-CEELGCGRKF  186 (359)
Q Consensus       108 ~~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~c~c~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~~~C~~~f  186 (359)
                      .|.|.+       |...|.+...|.+|.-.---. .-|.|.  +|+|+|+...+|..|.+-|.....-- -...-=.+..
T Consensus       267 dyiCqL-------CK~kYeD~F~LAQHrC~RIV~-vEYrCP--EC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~  336 (500)
T KOG3993|consen  267 DYICQL-------CKEKYEDAFALAQHRCPRIVH-VEYRCP--ECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAV  336 (500)
T ss_pred             HHHHHH-------HHHhhhhHHHHhhccCCeeEE-eeecCC--cccccccCchhhhhhhcccCCchhhhhcCCCChhhhh
Confidence            388998       999999999999986332211 225665  99999999999999988875432110 0000000000


Q ss_pred             CChHHHHHHHHH-cCCCCCCccccCCCCCccccChHHHHHHhhhhcCCCC----------------ccccCCcCccCCCh
Q psy1773         187 QTMKQYSTHLKE-HSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPE----------------DLVCKGCGKQFKVP  249 (359)
Q Consensus       187 ~~~~~l~~H~~~-h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------~~~C~~C~~~f~~~  249 (359)
                      .+....+.-.+. ....+.-|.|.+  |++.|.....|+.|+.+|+....                -+-|..|.-.+...
T Consensus       337 ~~rae~~ea~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~  414 (500)
T KOG3993|consen  337 ETRAEVQEAERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSAS  414 (500)
T ss_pred             hhhhhhhhccccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccc
Confidence            011000000000 001134688987  99999999999999888743211                13355555444432


Q ss_pred             HHHHHHHHHHcc-CCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         250 CRLREHYKAVHE-STKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       250 ~~l~~H~~~~H~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      ..--.+.. .+. ...-..|++  |+..+.++..--.+.+. -..+..|.|.+  |.-.|.+...|.+|+..-|
T Consensus       415 ~~~g~~vl-~~a~sael~~pp~--~~~ppsss~~sgg~~rl-g~~~q~f~~ky--~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  415 DSHGDEVL-YVAGSAELELPPY--DGSPPSSSGSSGGYGRL-GIAEQGFTCKY--CPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             ccccccee-eeeccccccCCCC--CCCCcccCCCCCccccc-cchhhcccccc--chHhhhcCcchHhHhhhcC
Confidence            21111111 011 111234655  77777776665555542 33445689998  9999999999999886644

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.36  E-value=2e-07  Score=48.54  Aligned_cols=26  Identities=27%  Similarity=0.694  Sum_probs=23.1

Q ss_pred             HHHhHHhhhCCCCccccccCCCCCccchhhccc
Q psy1773          95 TFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFS  127 (359)
Q Consensus        95 ~l~~H~~~h~~~~~~~C~~~~~~~~~C~~~f~~  127 (359)
                      +|..|+++|++++||.|++       |++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~-------C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY-------CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS-------SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC-------CcCeeCc
Confidence            4889999999999999998       9998863

...

>PHA00616 hypothetical protein

Probab=98.27  E-value=4.1e-07  Score=52.81  Aligned_cols=34  Identities=32%  Similarity=0.711  Sum_probs=25.9

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      ||+|+.  ||+.|...+.|..|++.||+++ ++.|+.
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~-~~~~~~   34 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQN-KLTLEY   34 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCC-ccceeE
Confidence            577877  8888888888888888888877 577654

>PHA00616 hypothetical protein

Probab=98.23  E-value=5.4e-07  Score=52.34  Aligned_cols=31  Identities=32%  Similarity=0.535  Sum_probs=28.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCCCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT  359 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~~~  359 (359)
                      ||+|+.  ||+.|..++.|.+|++.||+++..+
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCccc
Confidence            599999  9999999999999999999998753

>PHA00732 hypothetical protein

Probab=98.20  E-value=1.2e-06  Score=59.22  Aligned_cols=49  Identities=35%  Similarity=0.732  Sum_probs=31.7

Q ss_pred             ccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ||.|..  |++.|.+...|..|++..|.   ++.|+.  |++.|.   .|..|.+++.+
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~---~~~C~~--CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHT---LTKCPV--CNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccC---CCccCC--CCCEeC---ChhhhhcccCC
Confidence            466754  77777777777777763344   256776  777776   46677765544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.14  E-value=4.4e-06  Score=52.36  Aligned_cols=52  Identities=31%  Similarity=0.632  Sum_probs=38.4

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhh-cCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQH-NENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      .|.|++  |++ .-+...|..|.... ..+...+.|++  |...+.  .+|.+|+..+|+
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhcC
Confidence            488888  998 45567888887654 44433688988  988655  488889888875

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.03  E-value=3.3e-06  Score=57.05  Aligned_cols=45  Identities=24%  Similarity=0.429  Sum_probs=24.4

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccc
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNK  288 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~  288 (359)
                      ||.|..|++.|.+...|..|++..|.+   +.|+.  |++.|.   .|..|+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~--CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPV--CNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCC--CCCEeC---Chhhhhc
Confidence            355666666666666666665422432   35643  666665   3555554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.99  E-value=6.4e-06  Score=51.61  Aligned_cols=50  Identities=26%  Similarity=0.610  Sum_probs=23.1

Q ss_pred             cccccCCcCccccChHhhhccccccccCC-cccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         266 FKCTYDGCKLLFSTKSALKRHNKSKHLNM-RMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       266 ~~C~~~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      |.||+  |++ ..+...|..|....|..+ +.+.|++  |...+.  .+|..|+..++
T Consensus         3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            44554  555 233444555544444432 2355555  554333  25555555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.75  E-value=2.1e-05  Score=39.66  Aligned_cols=22  Identities=36%  Similarity=0.854  Sum_probs=13.2

Q ss_pred             eeccCCCccccccchhhHHHHHhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      |.|+.  |++.|.+...|.+|++.
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhH
Confidence            45655  66666666666666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.71  E-value=1.8e-05  Score=39.90  Aligned_cols=23  Identities=48%  Similarity=1.123  Sum_probs=17.6

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      |.|+.  |++.|.+...|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            56777  888888888888887764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.69  E-value=1.8e-05  Score=66.14  Aligned_cols=75  Identities=28%  Similarity=0.514  Sum_probs=40.3

Q ss_pred             CccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchh
Q psy1773         264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKS  343 (359)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~  343 (359)
                      +||+|++++|.+.+.+...|+.|+..-|...+...=+-+.=-..|            -..+| ||+|++  |++++....
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F------------~~~~K-PYrCev--C~KRYKNlN  412 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF------------SAKDK-PYRCEV--CDKRYKNLN  412 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc------------cccCC-ceeccc--cchhhccCc
Confidence            566666666666666666666665422221111111100000111            12334 799999  999999988


Q ss_pred             hHHHHHhhhc
Q psy1773         344 SLYAHLKHVH  353 (359)
Q Consensus       344 ~l~~H~~~hh  353 (359)
                      .|+-|...-|
T Consensus       413 GLKYHr~Hsh  422 (423)
T COG5189         413 GLKYHRKHSH  422 (423)
T ss_pred             cceecccccC
Confidence            8888865433

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.69  E-value=3.1e-05  Score=39.39  Aligned_cols=24  Identities=42%  Similarity=0.837  Sum_probs=14.1

Q ss_pred             eeccCCCccccccchhhHHHHHhhhc
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      |.|++  |++.|.+...|..|+++||
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            45666  6666666666666666655

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.60  E-value=3.4e-05  Score=55.56  Aligned_cols=73  Identities=27%  Similarity=0.387  Sum_probs=18.6

Q ss_pred             ccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHH
Q psy1773         238 VCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEH  317 (359)
Q Consensus       238 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H  317 (359)
                      .|..|+..|.+...|..|+...|.-..+       ....+.....+..+++.  .....+.|.+  |++.|.+...|..|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-------~~~~l~~~~~~~~~~~~--~~~~~~~C~~--C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-------DQKYLVDPNRLLNYLRK--KVKESFRCPY--CNKTFRSREALQEH   69 (100)
T ss_dssp             ---------------------------------------------------------SSEEBSS--SS-EESSHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc-------ccccccccccccccccc--ccCCCCCCCc--cCCCCcCHHHHHHH
Confidence            3777888888888888887766653322       11122244444444431  2223578887  88888888888888


Q ss_pred             HHhh
Q psy1773         318 MLQH  321 (359)
Q Consensus       318 ~~~h  321 (359)
                      |+.+
T Consensus        70 m~~~   73 (100)
T PF12756_consen   70 MRSK   73 (100)
T ss_dssp             HHHT
T ss_pred             HcCc
Confidence            8764

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.53  E-value=5.8e-05  Score=39.70  Aligned_cols=26  Identities=27%  Similarity=0.456  Sum_probs=16.7

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      ||.|..  |++.|.+...|..|++.|++
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhcC
Confidence            366666  66666666666666666654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.49  E-value=6.8e-05  Score=53.97  Aligned_cols=74  Identities=26%  Similarity=0.506  Sum_probs=22.1

Q ss_pred             ccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHH
Q psy1773         267 KCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLY  346 (359)
Q Consensus       267 ~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~  346 (359)
                      +|.+  |+..|.+...|..|+...|.-..+       ....+.....+..+++.-...  .+.|.+  |++.|.+...|.
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~~-------~~~~l~~~~~~~~~~~~~~~~--~~~C~~--C~~~f~s~~~l~   67 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDIP-------DQKYLVDPNRLLNYLRKKVKE--SFRCPY--CNKTFRSREALQ   67 (100)
T ss_dssp             ---------------------------------------------------------S--SEEBSS--SS-EESSHHHHH
T ss_pred             Cccc--cccccccccccccccccccccccc-------cccccccccccccccccccCC--CCCCCc--cCCCCcCHHHHH
Confidence            4877  999999999999999877764332       112233445555555443332  499999  999999999999


Q ss_pred             HHHhhhc
Q psy1773         347 AHLKHVH  353 (359)
Q Consensus       347 ~H~~~hh  353 (359)
                      .|++.++
T Consensus        68 ~Hm~~~~   74 (100)
T PF12756_consen   68 EHMRSKH   74 (100)
T ss_dssp             HHHHHTT
T ss_pred             HHHcCcc
Confidence            9999753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.46  E-value=8.5e-05  Score=37.72  Aligned_cols=24  Identities=50%  Similarity=1.110  Sum_probs=17.7

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      |.|++  |++.|.+...|..|+++|+
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            56887  8888888888888888764

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.35  E-value=9.5e-05  Score=38.87  Aligned_cols=26  Identities=38%  Similarity=0.680  Sum_probs=20.1

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ||.|..  |++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhcC
Confidence            477877  88888888888888877754

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.34  E-value=4e-05  Score=64.14  Aligned_cols=26  Identities=35%  Similarity=0.691  Sum_probs=17.2

Q ss_pred             CCCccccCCCCCccccChHHHHHHhh
Q psy1773         203 SAPYMCDYKGCGKSFYLMASLKSHQR  228 (359)
Q Consensus       203 ~~~~~C~~~~C~~~f~~~~~l~~H~~  228 (359)
                      ++||.|++..|.|.+.+...|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhh
Confidence            36677766667777666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.92  E-value=0.00074  Score=40.19  Aligned_cols=40  Identities=28%  Similarity=0.498  Sum_probs=20.8

Q ss_pred             hccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         284 KRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       284 ~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      ..+.+.++..+.|-.|++  |+..+.+..+|++|+.++|+.+
T Consensus        12 ~~~~k~~~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             ----CCCCTTS--EE-TT--T--EESSHHHHHHHHHHHTTTS
T ss_pred             hhHHHHhhccCCCCCCCc--chhhccchhhHHHHHHHHhccc
Confidence            334443445566667777  7777777777777777766665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.86  E-value=0.00084  Score=34.05  Aligned_cols=24  Identities=46%  Similarity=0.783  Sum_probs=15.9

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |.|+.  |++... +..|.+|++.+|+
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhCc
Confidence            56777  777776 7777777777764

>KOG4173|consensus

Probab=96.69  E-value=0.00055  Score=53.75  Aligned_cols=87  Identities=23%  Similarity=0.434  Sum_probs=57.7

Q ss_pred             CccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHc---------cCCCccccccCCcCc
Q psy1773         205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH---------ESTKNFKCTYDGCKL  275 (359)
Q Consensus       205 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---------~~~~~~~C~~~~C~~  275 (359)
                      .+.|++..|...|.+-..+..|..+-|++    .|.+|.+.|.+...|..|+...|         .|...|+|-+++|+.
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            35566656666666666666665443333    47777777777777777765555         245568888888888


Q ss_pred             cccChHhhhccccccccCCc
Q psy1773         276 LFSTKSALKRHNKSKHLNMR  295 (359)
Q Consensus       276 ~f~~~~~l~~H~~~~H~~~~  295 (359)
                      .|.+...-..|+-..|.-..
T Consensus       155 KFkT~r~RkdH~I~~Hk~Pa  174 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKYPA  174 (253)
T ss_pred             hhhhhhhhhhHHHHhccCCc
Confidence            88888888888776675433

>smart00355 ZnF_C2H2 zinc finger

Probab=96.68  E-value=0.0022  Score=32.95  Aligned_cols=23  Identities=48%  Similarity=0.988  Sum_probs=12.4

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      |.|+.  |++.|.....|..|++.|
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHh
Confidence            34554  555555555555555544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.48  E-value=0.0018  Score=55.20  Aligned_cols=129  Identities=26%  Similarity=0.538  Sum_probs=64.8

Q ss_pred             cccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCC---cccc------ChHHHHHHhhhhcCC---CCccccCCc
Q psy1773         175 LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCG---KSFY------LMASLKSHQRVHVTN---PEDLVCKGC  242 (359)
Q Consensus       175 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~---~~f~------~~~~l~~H~~~h~~~---~~~~~C~~C  242 (359)
                      |.|+...|......-..|..|.+..++   .+.|.+  |-   +.|.      ++..|..|...-..+   ..--.|..|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~---~~~C~~--C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG---FVLCSE--CIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC---cEEhHh--hhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc
Confidence            666665566666666777777776654   245553  42   2222      334455554432111   011246666


Q ss_pred             CccCCChHHHHHHHHHHccCCCccccccCCcCcc-------ccChHhhhccccccccCCcccCCCCCCcC----cccCCh
Q psy1773         243 GKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLL-------FSTKSALKRHNKSKHLNMRMFPCPLVTCG----KSFLRS  311 (359)
Q Consensus       243 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~~H~~~~~~~C~~~~C~----~~f~~~  311 (359)
                      ...|-+-..|.+|++..|.     .|-+  |+..       |.+..+|..|.+..|     |.|.++.|-    ..|...
T Consensus       227 ~~~FYdDDEL~~HcR~~HE-----~ChI--CD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~qtc~~~k~~vf~~~  294 (493)
T COG5236         227 KIYFYDDDELRRHCRLRHE-----ACHI--CDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTFQTCRVGKCYVFPYH  294 (493)
T ss_pred             cceecChHHHHHHHHhhhh-----hhhh--hhccCccchhhhhCHHHHHHHhhcCc-----eEEEEEEEecCcEEEeccH
Confidence            6666666666666665553     3443  4432       444555555554322     344332231    245555


Q ss_pred             HHHHHHHHh
Q psy1773         312 EHLQEHMLQ  320 (359)
Q Consensus       312 ~~l~~H~~~  320 (359)
                      ..|..|+..
T Consensus       295 ~el~~h~~~  303 (493)
T COG5236         295 TELLEHLTR  303 (493)
T ss_pred             HHHHHHHHH
Confidence            555555533

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.35  E-value=0.0051  Score=52.47  Aligned_cols=132  Identities=24%  Similarity=0.522  Sum_probs=76.5

Q ss_pred             cccCCCccchhhcCHHHHHHHHHHhCCCCccccccccch---h------hcCChHHHHHHHHHcCCC---CCCccccCCC
Q psy1773         145 YPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCG---R------KFQTMKQYSTHLKEHSNV---SAPYMCDYKG  212 (359)
Q Consensus       145 ~~c~c~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~---~------~f~~~~~l~~H~~~h~~~---~~~~~C~~~~  212 (359)
                      |.|+-.-|..+......|..|.+..++.  +.|..  |-   +      ...++..|+.|...-..+   ..--.|.+  
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~--C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F--  225 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSE--CIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF--  225 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHh--hhcCcccCccceeeeecccccccccCCccccCcCCCchhhh--
Confidence            5666556666666677777887764432  33444  32   2      223445555555432211   11235776  


Q ss_pred             CCccccChHHHHHHhhhhcCCCCccccCCcCc-------cCCChHHHHHHHHHHccCCCccccccCCcC----ccccChH
Q psy1773         213 CGKSFYLMASLKSHQRVHVTNPEDLVCKGCGK-------QFKVPCRLREHYKAVHESTKNFKCTYDGCK----LLFSTKS  281 (359)
Q Consensus       213 C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~----~~f~~~~  281 (359)
                      |...|.+-..|..|.+..|.     .|.+|++       -|.+...|..|.+..|     |.|.+..|-    ..|....
T Consensus       226 C~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~qtc~~~k~~vf~~~~  295 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTFQTCRVGKCYVFPYHT  295 (493)
T ss_pred             ccceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCc-----eEEEEEEEecCcEEEeccHH
Confidence            77788888888888776532     2555543       4667777777766433     555443232    4577777


Q ss_pred             hhhcccccccc
Q psy1773         282 ALKRHNKSKHL  292 (359)
Q Consensus       282 ~l~~H~~~~H~  292 (359)
                      .|+.|+...|.
T Consensus       296 el~~h~~~~h~  306 (493)
T COG5236         296 ELLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHHhh
Confidence            78888765564

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.30  E-value=0.0029  Score=37.73  Aligned_cols=40  Identities=20%  Similarity=0.306  Sum_probs=26.2

Q ss_pred             HHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         315 QEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       315 ~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ..+.+.+.....|-.|++  |+..+.+..+|.+|+...|+.+
T Consensus        12 ~~~~k~~~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             ----CCCCTTS--EE-TT--T--EESSHHHHHHHHHHHTTTS
T ss_pred             hhHHHHhhccCCCCCCCc--chhhccchhhHHHHHHHHhccc
Confidence            455666655555899999  9999999999999999998754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.28  E-value=0.0035  Score=32.12  Aligned_cols=24  Identities=29%  Similarity=0.657  Sum_probs=21.3

Q ss_pred             eeccCCCccccccchhhHHHHHhhhc
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      |.|..  |++.|.+...|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            57988  9999999999999999553

>KOG4173|consensus

Probab=96.27  E-value=0.0013  Score=51.70  Aligned_cols=71  Identities=28%  Similarity=0.581  Sum_probs=33.7

Q ss_pred             cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccccccc---------CCcccCCCCCCcCcccCChH
Q psy1773         242 CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHL---------NMRMFPCPLVTCGKSFLRSE  312 (359)
Q Consensus       242 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~---------~~~~~~C~~~~C~~~f~~~~  312 (359)
                      |...|.+...+..|+...|++    .|..  |.+.|.+..-|..|+..-|.         |...|.|-+.+|+..|.+..
T Consensus        87 c~~~~d~lD~~E~hY~~~h~~----sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r  160 (253)
T KOG4173|consen   87 CCQVFDALDDYEHHYHTLHGN----SCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSR  160 (253)
T ss_pred             hHHHHhhhhhHHHhhhhcccc----hhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhh
Confidence            444555555555554434432    3443  55555555555555443231         23345555445555555555


Q ss_pred             HHHHHH
Q psy1773         313 HLQEHM  318 (359)
Q Consensus       313 ~l~~H~  318 (359)
                      .-..|+
T Consensus       161 ~RkdH~  166 (253)
T KOG4173|consen  161 DRKDHM  166 (253)
T ss_pred             hhhhHH
Confidence            555554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.14  E-value=0.0027  Score=32.47  Aligned_cols=16  Identities=38%  Similarity=0.764  Sum_probs=7.4

Q ss_pred             cCcccCChHHHHHHHH
Q psy1773         304 CGKSFLRSEHLQEHML  319 (359)
Q Consensus       304 C~~~f~~~~~l~~H~~  319 (359)
                      |++.|.+...|..|++
T Consensus         6 C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    6 CNKSFSSENSLRQHLR   21 (25)
T ss_dssp             TTEEESSHHHHHHHHT
T ss_pred             CCCCcCCHHHHHHHHC
Confidence            4444444444444443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.04  E-value=0.0049  Score=31.48  Aligned_cols=23  Identities=35%  Similarity=0.678  Sum_probs=21.0

Q ss_pred             eeccCCCccccccchhhHHHHHhhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      |.|.+  |+..|.+...|..|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            68999  999999999999999864

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.99  E-value=0.0045  Score=31.28  Aligned_cols=24  Identities=29%  Similarity=0.718  Sum_probs=16.2

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      |+|+.  |+.... ...|.+|++.|++
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhCc
Confidence            56777  887777 7788888877653

>KOG2231|consensus

Probab=95.83  E-value=0.017  Score=54.79  Aligned_cols=128  Identities=22%  Similarity=0.386  Sum_probs=76.0

Q ss_pred             ccccCCCCCcccc---------------ChHHHHHHhhhhcCCCCccccCCcCc---------cCCChHHHHHHHHHHcc
Q psy1773         206 YMCDYKGCGKSFY---------------LMASLKSHQRVHVTNPEDLVCKGCGK---------QFKVPCRLREHYKAVHE  261 (359)
Q Consensus       206 ~~C~~~~C~~~f~---------------~~~~l~~H~~~h~~~~~~~~C~~C~~---------~f~~~~~l~~H~~~~H~  261 (359)
                      +.|.+  |++.|.               +...|++|+.-.|   +.+.|.+|-.         ..-+...|..|++.--.
T Consensus       100 ~~C~~--C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H---~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~  174 (669)
T KOG2231|consen  100 HSCHI--CDRRFRALYNKKECLHCTEFKSVENLKNHMRDQH---KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP  174 (669)
T ss_pred             hhcCc--cccchhhhcccCCCccccchhHHHHHHHHHHHhh---hhhccccccccceeeeeeeehehHHHHHHHHhcCCC
Confidence            67886  888773               6677888884432   3355555532         12234567777552111


Q ss_pred             CCC----ccccccCCcCccccChHhhhccccccccCCcccCCCC----CCcCcccCChHHHHHHHHhhcCCCCceeccCC
Q psy1773         262 STK----NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL----VTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQ  333 (359)
Q Consensus       262 ~~~----~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~----~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~  333 (359)
                      +++    --.|.+  |...|.....|..|++..|     |.|.+    .+++..|.....|..|-|.+|     |.|+.+
T Consensus       175 d~~s~rGhp~C~~--C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H-----flCE~~  242 (669)
T KOG2231|consen  175 DDESCRGHPLCKF--CHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH-----FLCEEE  242 (669)
T ss_pred             ccccccCCccchh--hhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC-----cccccc
Confidence            121    135776  8889999999999988655     45555    113567888888999888764     566633


Q ss_pred             Cccc-cccchhhHHHHHh
Q psy1773         334 DCLM-SYVAKSSLYAHLK  350 (359)
Q Consensus       334 ~C~~-~f~~~~~l~~H~~  350 (359)
                      -|.- .|..-..+..|++
T Consensus       243 ~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  243 FCRTKKFYVAFELEIELK  260 (669)
T ss_pred             ccccceeeehhHHHHHHH
Confidence            3553 2332224444444

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.72  E-value=0.0026  Score=59.11  Aligned_cols=61  Identities=28%  Similarity=0.526  Sum_probs=52.1

Q ss_pred             CCCCCeeeccCCCCCCcccChhHHHhHHhhhCCCCccccccCCCCCccchhhcccHHHHHhhhhhcCC
Q psy1773          73 SKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDE  140 (359)
Q Consensus        73 ~~~~~~~~C~~~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~~~  140 (359)
                      ......+.|+  .|...|........|.+.+.++.++.|...+     |...+.....+..|...++.
T Consensus        28 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~   88 (467)
T COG5048          28 SNAPRPDSCP--NCTDSFSRLEHLTRHIRSHTGEKPSQCSYSG-----CDKSFSRPLELSRHLRTHHN   88 (467)
T ss_pred             ccCCchhhcc--cccccccccchhhhhcccccccCCccccccc-----cccccCCcchhhhhcccccc
Confidence            3456678899  7999999999999999999999999999855     89999999999888877654

>KOG2231|consensus

Probab=95.62  E-value=0.03  Score=53.23  Aligned_cols=139  Identities=23%  Similarity=0.478  Sum_probs=89.9

Q ss_pred             cccccccchhhcC---------------ChHHHHHHHHHcCCCCCCccccCCCCC---------ccccChHHHHHHhhhh
Q psy1773         175 LCCEELGCGRKFQ---------------TMKQYSTHLKEHSNVSAPYMCDYKGCG---------KSFYLMASLKSHQRVH  230 (359)
Q Consensus       175 ~~C~~~~C~~~f~---------------~~~~l~~H~~~h~~~~~~~~C~~~~C~---------~~f~~~~~l~~H~~~h  230 (359)
                      +.|..  |++.|.               +...|+.|+...|.   -+.|.+  |-         ....+...|.+|+..-
T Consensus       100 ~~C~~--C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~---~~~c~l--C~~~~kif~~e~k~Yt~~el~~h~~~g  172 (669)
T KOG2231|consen  100 HSCHI--CDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK---LHLCSL--CLQNLKIFINERKLYTRAELNLHLMFG  172 (669)
T ss_pred             hhcCc--cccchhhhcccCCCccccchhHHHHHHHHHHHhhh---hhcccc--ccccceeeeeeeehehHHHHHHHHhcC
Confidence            67999  998884               78899999966653   255554  32         2233566788887654


Q ss_pred             cCCCC----ccccCCcCccCCChHHHHHHHHHHccCCCcccccc----CCcCccccChHhhhccccccccCCcccCCCCC
Q psy1773         231 VTNPE----DLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY----DGCKLLFSTKSALKRHNKSKHLNMRMFPCPLV  302 (359)
Q Consensus       231 ~~~~~----~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~----~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~  302 (359)
                      -.+++    --.|..|...|.....|.+|++..|     |.|.+    ++++.-|.....|..|.+..|     |.|...
T Consensus       173 d~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H-----flCE~~  242 (669)
T KOG2231|consen  173 DPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH-----FLCEEE  242 (669)
T ss_pred             CCccccccCCccchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC-----cccccc
Confidence            22222    2469999999999999999998555     45554    124566788889999998766     677743


Q ss_pred             CcC-cccCChHHHHHHHH----hhcCCCCceecc
Q psy1773         303 TCG-KSFLRSEHLQEHML----QHNENKPKFTCP  331 (359)
Q Consensus       303 ~C~-~~f~~~~~l~~H~~----~h~~~~~~~~C~  331 (359)
                      .|. +.|...-.+..|++    .+.-++ .|.|.
T Consensus       243 ~C~~~~f~~~~~~ei~lk~~~~~~~~e~-~~~~~  275 (669)
T KOG2231|consen  243 FCRTKKFYVAFELEIELKAHNRFIQHEK-CYICR  275 (669)
T ss_pred             ccccceeeehhHHHHHHHhhccccchhe-eccCC
Confidence            364 44544444444444    333344 46663

>KOG1146|consensus

Probab=95.56  E-value=0.0044  Score=62.23  Aligned_cols=104  Identities=22%  Similarity=0.409  Sum_probs=60.7

Q ss_pred             cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccccccc------------------------CCccc
Q psy1773         242 CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHL------------------------NMRMF  297 (359)
Q Consensus       242 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~------------------------~~~~~  297 (359)
                      |+..+.....+..|+...|+-.+.|+|+.  |+..|+....|-.|++.+|.                        +-++|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~  519 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPY  519 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCc--cchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcc
Confidence            33344444444444444444455555543  55555555555555554332                        23467


Q ss_pred             CCCCCCcCcccCChHHHHHHHHhh--c----------------------------------------CCCCceeccCCCc
Q psy1773         298 PCPLVTCGKSFLRSEHLQEHMLQH--N----------------------------------------ENKPKFTCPYQDC  335 (359)
Q Consensus       298 ~C~~~~C~~~f~~~~~l~~H~~~h--~----------------------------------------~~~~~~~C~~~~C  335 (359)
                      .|..  |..++..+..|.+|+..-  -                                        ..++.+.|.+  |
T Consensus       520 ~C~~--C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~v--c  595 (1406)
T KOG1146|consen  520 PCRA--CNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEV--C  595 (1406)
T ss_pred             ccee--eeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhh--h
Confidence            7777  888888888887776532  1                                        1123577888  8


Q ss_pred             cccccchhhHHHHHhh
Q psy1773         336 LMSYVAKSSLYAHLKH  351 (359)
Q Consensus       336 ~~~f~~~~~l~~H~~~  351 (359)
                      ++.-.-..+|..|+..
T Consensus       596 ~yetniarnlrihmts  611 (1406)
T KOG1146|consen  596 SYETNIARNLRIHMTA  611 (1406)
T ss_pred             cchhhhhhcccccccc
Confidence            8877777777777653

>KOG1146|consensus

Probab=95.24  E-value=0.011  Score=59.66  Aligned_cols=74  Identities=23%  Similarity=0.442  Sum_probs=64.0

Q ss_pred             cCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhc-------------------------CCCCc
Q psy1773         273 CKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN-------------------------ENKPK  327 (359)
Q Consensus       273 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~  327 (359)
                      |+..+.+...+..|+...|...+.|+|+.  |+..|+....|..|||..|                         +.+ +
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~-p  518 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGK-P  518 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCc--cchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCC-c
Confidence            56667777888888888888889999999  9999999999999999833                         223 7


Q ss_pred             eeccCCCccccccchhhHHHHHhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      |.|..  |..++..+.+|..|++.
T Consensus       519 ~~C~~--C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRA--CNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccee--eeeeeecchHHHHHHHH
Confidence            99999  99999999999999864

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.23  E-value=0.0042  Score=57.73  Aligned_cols=64  Identities=22%  Similarity=0.312  Sum_probs=38.2

Q ss_pred             CCccccCCCCCccccChHHHHHHhhhhcCC-CCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         204 APYMCDYKGCGKSFYLMASLKSHQRVHVTN-PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       204 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      ..+.+....|...+.....+..|...+... ...+.+..|.+.|.....+..|++ .|....++.|
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  449 (467)
T COG5048         385 KKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKK-IHTNHAPLLC  449 (467)
T ss_pred             ccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccc-ccccCCceee
Confidence            444444444666666666666666555221 124566777777777777777766 6666666555

>KOG2482|consensus

Probab=95.13  E-value=0.026  Score=48.27  Aligned_cols=159  Identities=21%  Similarity=0.305  Sum_probs=94.0

Q ss_pred             hHHHHHHHHHcCCCCCCccccCCCCCcccc-ChHHHHHHhh-hhcCC--------------------CCccccCCcCccC
Q psy1773         189 MKQYSTHLKEHSNVSAPYMCDYKGCGKSFY-LMASLKSHQR-VHVTN--------------------PEDLVCKGCGKQF  246 (359)
Q Consensus       189 ~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~-~~~~l~~H~~-~h~~~--------------------~~~~~C~~C~~~f  246 (359)
                      +..|..+++.-.+.....+|-+  |...+. .++....|+- +|.-.                    -..+.|-.|.+.|
T Consensus       128 ~eaLeqqQ~Eredt~fslqClF--Cn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekif  205 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLF--CNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIF  205 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEE--ecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeecccc
Confidence            4566667666655456778988  886654 4555666653 34211                    1237899999999


Q ss_pred             CChHHHHHHHHHH-ccCCCcccccc--------CCcCccccCh-Hhh-----hccccc--------cccCCcc--cCCCC
Q psy1773         247 KVPCRLREHYKAV-HESTKNFKCTY--------DGCKLLFSTK-SAL-----KRHNKS--------KHLNMRM--FPCPL  301 (359)
Q Consensus       247 ~~~~~l~~H~~~~-H~~~~~~~C~~--------~~C~~~f~~~-~~l-----~~H~~~--------~H~~~~~--~~C~~  301 (359)
                      +.+..|+.||+.. |....|-.=.+        -+=|++..-. +.+     ..+...        .+ +..+  ..|-.
T Consensus       206 rdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed-~a~a~~v~CLf  284 (423)
T KOG2482|consen  206 RDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNED-DAEALSVVCLF  284 (423)
T ss_pred             CCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcC-CCCccceEEEe
Confidence            9999999999743 43333311111        1122221111 111     011110        00 1112  58988


Q ss_pred             CCcCcccCChHHHHHHHHhhcC--------C----------------CCceeccCCCccccccchhhHHHHHhhh
Q psy1773         302 VTCGKSFLRSEHLQEHMLQHNE--------N----------------KPKFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       302 ~~C~~~f~~~~~l~~H~~~h~~--------~----------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                        |.....+...|..||.+.|.        +                +-.+.|...+|.-.|.....|..||..+
T Consensus       285 --C~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  285 --CTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             --eccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence              99999999999999987651        0                0023333344999999999999998654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.07  E-value=0.0081  Score=31.36  Aligned_cols=22  Identities=27%  Similarity=0.590  Sum_probs=13.4

Q ss_pred             eeccCCCccccccchhhHHHHHhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      |.|..  |++.|.+...|..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            55666  66666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.05  E-value=0.012  Score=45.83  Aligned_cols=40  Identities=18%  Similarity=0.368  Sum_probs=32.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchh
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKS  343 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~  343 (359)
                      -+|.|.   |+.   ....+.+|.++|++++ +|.|..  |+..|....
T Consensus       118 ~~Y~C~---C~~---~~~~~rrH~ri~~g~~-~YrC~~--C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK---CQE---HQLTVRRHNRVVRGEA-VYRCRR--CGETLVFKG  157 (160)
T ss_pred             EEEEcC---CCC---eeCHHHHHHHHhcCCc-cEECCC--CCceeEEec
Confidence            368895   887   7788899999999988 699988  998886543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.81  E-value=0.009  Score=31.17  Aligned_cols=21  Identities=38%  Similarity=0.774  Sum_probs=10.7

Q ss_pred             cCCCCCCcCcccCChHHHHHHHH
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHML  319 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~  319 (359)
                      |.|..  |++.|.+...|..|++
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTT
T ss_pred             CCccc--CCCCcCCHHHHHHHHc
Confidence            34554  5555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.18  E-value=0.027  Score=43.94  Aligned_cols=37  Identities=22%  Similarity=0.504  Sum_probs=22.6

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccC
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFST  279 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~  279 (359)
                      +|.|. |+.   ....+.+|.+ +|+++++|.|..  |+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~r-i~~g~~~YrC~~--C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNR-VVRGEAVYRCRR--CGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHH-HhcCCccEECCC--CCceeEE
Confidence            46665 665   4555666655 666666666653  6666543

>KOG2482|consensus

Probab=93.70  E-value=0.15  Score=43.83  Aligned_cols=54  Identities=26%  Similarity=0.378  Sum_probs=38.9

Q ss_pred             CccccccccchhhcC-ChHHHHHHHHHcCCC---------------------CCCccccCCCCCccccChHHHHHHhhhh
Q psy1773         173 LTLCCEELGCGRKFQ-TMKQYSTHLKEHSNV---------------------SAPYMCDYKGCGKSFYLMASLKSHQRVH  230 (359)
Q Consensus       173 ~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~~---------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h  230 (359)
                      ...+|-.  |...+. +.+....|+-..++-                     -..++|-+  |.+.|+.+..|+.||+.-
T Consensus       143 fslqClF--Cn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLy--CekifrdkntLkeHMrkK  218 (423)
T KOG2482|consen  143 FSLQCLF--CNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLY--CEKIFRDKNTLKEHMRKK  218 (423)
T ss_pred             eeeEEEE--ecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeee--eccccCCcHHHHHHHHhc
Confidence            3467888  977664 466677776554320                     12378988  999999999999999863

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.12  E-value=0.11  Score=28.76  Aligned_cols=23  Identities=35%  Similarity=0.670  Sum_probs=17.3

Q ss_pred             ceeccCCCccccccchhhHHHHHhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      +|.|.+  |+..|.+...+..|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            477887  88888877777777654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.93  E-value=0.18  Score=25.66  Aligned_cols=19  Identities=42%  Similarity=1.230  Sum_probs=9.7

Q ss_pred             CCCCCCcCcccCChHHHHHHHH
Q psy1773         298 PCPLVTCGKSFLRSEHLQEHML  319 (359)
Q Consensus       298 ~C~~~~C~~~f~~~~~l~~H~~  319 (359)
                      .|+.  ||+.| ....|..|+.
T Consensus         4 ~C~~--CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPI--CGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCC--CCCEE-CHHHHHHHHH
Confidence            4554  55555 4445555543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.62  E-value=0.14  Score=28.35  Aligned_cols=23  Identities=26%  Similarity=0.564  Sum_probs=19.3

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHh
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQ  320 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~  320 (359)
                      +|.|++  |++.|.+...+..|+..
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            578988  99999988888888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.66  E-value=0.21  Score=25.41  Aligned_cols=21  Identities=29%  Similarity=0.536  Sum_probs=17.7

Q ss_pred             eeccCCCccccccchhhHHHHHhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      ..|+.  ||+.| ....|.+|+..
T Consensus         3 ~~C~~--CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPI--CGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCC--CCCEE-CHHHHHHHHHh
Confidence            57999  99999 67889999763

>KOG4377|consensus

Probab=87.51  E-value=0.41  Score=42.35  Aligned_cols=28  Identities=18%  Similarity=0.383  Sum_probs=24.3

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      -|.|...||+..|.+.+.+..|.+.|-.
T Consensus       401 hfhc~r~Gc~~tl~s~sqm~shkrkheR  428 (480)
T KOG4377|consen  401 HFHCDRLGCEATLYSVSQMASHKRKHER  428 (480)
T ss_pred             eeeecccCCceEEEehhhhhhhhhhhhh
Confidence            4789999999999999999999887743

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=86.93  E-value=1.3  Score=32.24  Aligned_cols=26  Identities=23%  Similarity=0.533  Sum_probs=23.4

Q ss_pred             ceec----cCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTC----PYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C----~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      -|.|    ..  |++.+.+...+.+|++.+|+
T Consensus        80 G~~C~~~~~~--C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPH--CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCC--CCcEeccHHHHHHHHHHhcC
Confidence            3889    77  99999999999999999986

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=85.86  E-value=3  Score=36.93  Aligned_cols=22  Identities=18%  Similarity=0.166  Sum_probs=17.6

Q ss_pred             CCCccchhhcccHHHHHhhhhh
Q psy1773         116 ANNTPCMWGFFSKHKLLRHMTS  137 (359)
Q Consensus       116 ~~~~~C~~~f~~~~~l~~H~~~  137 (359)
                      ++|..|...|.+...-+.|+++
T Consensus         4 ftC~tC~v~F~~ad~Qr~HyKS   25 (390)
T KOG2785|consen    4 FTCNTCNVEFDDADEQRAHYKS   25 (390)
T ss_pred             ceeeceeeeeccHHHHHHHhhh
Confidence            3444599999999999999875

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=85.56  E-value=0.46  Score=28.98  Aligned_cols=28  Identities=29%  Similarity=0.468  Sum_probs=18.2

Q ss_pred             CCCccccCCcCccCCChHHHHHHHHHHc
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREHYKAVH  260 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H  260 (359)
                      ++.-+.|+.|+..|....++.+|+...|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4455667777777777777777765444

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.32  E-value=0.53  Score=28.73  Aligned_cols=24  Identities=29%  Similarity=0.663  Sum_probs=11.7

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHH
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHML  319 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~  319 (359)
                      +.-+.|+-  |+..|....++.+|..
T Consensus        15 E~~lrCPR--C~~~FR~~K~Y~RHVN   38 (65)
T COG4049          15 EEFLRCPR--CGMVFRRRKDYIRHVN   38 (65)
T ss_pred             ceeeeCCc--hhHHHHHhHHHHHHhh
Confidence            33444544  5555555555555543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=83.49  E-value=1.2  Score=32.47  Aligned_cols=82  Identities=16%  Similarity=0.293  Sum_probs=48.3

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCccccc-c----CCcCccccChHhhh---------ccccccccCCcccCC-
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT-Y----DGCKLLFSTKSALK---------RHNKSKHLNMRMFPC-  299 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~----~~C~~~f~~~~~l~---------~H~~~~H~~~~~~~C-  299 (359)
                      +...|..|+....- +.+..|++..|...+...-. +    ..-.........+.         ..+. .+   ..|.| 
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp-~~---~G~~C~   84 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLP-VY---DGYRCQ   84 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCC-CC---CCeeee
Confidence            56789999988776 88999999666533211100 0    00000000111110         0011 11   33899 


Q ss_pred             ---CCCCcCcccCChHHHHHHHHhhcC
Q psy1773         300 ---PLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       300 ---~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                         ..  |+..+.+...+..|++.+||
T Consensus        85 ~~~~~--C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   85 CDPPH--CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             cCCCC--CCcEeccHHHHHHHHHHhcC
Confidence               76  99999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=82.55  E-value=0.52  Score=38.44  Aligned_cols=38  Identities=26%  Similarity=0.420  Sum_probs=17.5

Q ss_pred             CCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHH
Q psy1773         213 CGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREH  255 (359)
Q Consensus       213 C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H  255 (359)
                      |++.|....-|.+|++.     +-|+|.+|.+.+-+-..|..|
T Consensus        16 cnrefddekiliqhqka-----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   16 CNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             cccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceee
Confidence            45555555545444432     124455554444444444444

>KOG2785|consensus

Probab=81.86  E-value=2.2  Score=37.77  Aligned_cols=22  Identities=23%  Similarity=0.680  Sum_probs=18.1

Q ss_pred             cccCCCccchhhcCHHHHHHHHHH
Q psy1773         145 YPCDQKNCNKRFTTLSNLKMHMVR  168 (359)
Q Consensus       145 ~~c~c~~C~~~f~~~~~l~~H~~~  168 (359)
                      |.|.  .|...|.+....+.|+++
T Consensus         4 ftC~--tC~v~F~~ad~Qr~HyKS   25 (390)
T KOG2785|consen    4 FTCN--TCNVEFDDADEQRAHYKS   25 (390)
T ss_pred             ceee--ceeeeeccHHHHHHHhhh
Confidence            5666  699999999888999875

>KOG2893|consensus

Probab=81.64  E-value=0.46  Score=38.73  Aligned_cols=38  Identities=34%  Similarity=0.717  Sum_probs=20.1

Q ss_pred             cCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHH
Q psy1773         273 CKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEH  317 (359)
Q Consensus       273 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H  317 (359)
                      |.+.|.....|.+|++..|     |+|.+  |.+..-+...|..|
T Consensus        16 cnrefddekiliqhqkakh-----fkchi--chkkl~sgpglsih   53 (341)
T KOG2893|consen   16 CNREFDDEKILIQHQKAKH-----FKCHI--CHKKLFSGPGLSIH   53 (341)
T ss_pred             cccccchhhhhhhhhhhcc-----ceeee--ehhhhccCCCceee
Confidence            5555555555555554333     55555  55555444445444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	359
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-15
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		7e-13
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-12
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-13
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-12
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-09
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		6e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		2e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		6e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		5e-05
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-04
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		5e-04
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		5e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-04

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 79  WSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH 138
           + C   +C          + HL KH  ++PF CK        C  GF S H L RH  +H
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCK-----EEGCEKGFTSLHHLTRHSLTH 67
Query: 139 DEDKKCYPCDQKNCNKRFTTLSNLKMHMVR--HGKPLTLCCEELGCGRKFQTMKQYSTHL 196
             +K  + CD   C+ RFTT +N+K H  R  + K     C    CG+ F+   Q   H 
Sbjct: 68  TGEKN-FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126
Query: 197 KEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP--EDLVCKGCGKQFKV 248
             H+    PY C ++GC K F L + LK H++VH   P  +D  C   GK + +
Sbjct: 127 FSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL 179

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 130 KLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTM 189
           KL  H+  H  +K  +PC ++ C K FT+L +L  H + H       C+  GC  +F T 
Sbjct: 29  KLQAHLCKHTGEKP-FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK 87
Query: 190 KQYSTHLKEHSNVS-APYMCDYKGCGKSFYLMASLKSHQRVHVTN-PEDLVCKGCGKQFK 247
                H     N+    Y+C ++ CGK+F     LK HQ  H    P +   +GC K+F 
Sbjct: 88  ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFS 147
Query: 248 VPCRLREHYK--AVHESTKNFKCTYDG 272
           +P RL+ H K  A +   K+  C++ G
Sbjct: 148 LPSRLKRHEKVHAGYPCKKDDSCSFVG 174

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 202 VSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAV 259
           V   Y+C +  CG ++     L++H   H T  +   CK  GC K F     L  H    
Sbjct: 9   VYKRYICSFADCGAAYNKNWKLQAHLCKH-TGEKPFPCKEEGCEKGFTSLHHLTRH-SLT 66
Query: 260 HESTKNFKCTYDGCKLLFSTKSALKRH-NKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHM 318
           H   KNF C  DGC L F+TK+ +K+H N+  ++ + ++ C    CGK+F +   L+ H 
Sbjct: 67  HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126
Query: 319 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 354
             H +  P + CP++ C   +   S L  H K VH+
Sbjct: 127 FSHTQQLP-YECPHEGCDKRFSLPSRLKRHEK-VHA 160

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 156 FTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGK 215
           F + S++    +  G+    C E   CG+ F      + H + H+    PY C    CGK
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPE---CGKSFSRSDHLAEHQRTHTG-EKPYKCPE--CGK 57
Query: 216 SFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKL 275
           SF     L  HQR H T  +   C  CGK F     LR H +  H   K + C    C  
Sbjct: 58  SFSDKKDLTRHQRTH-TGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPE--CGK 113
Query: 276 LFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 335
            FS  + L+ H ++ H   + + CP   CGKSF R ++L  H   H   KP + CP  +C
Sbjct: 114 SFSQLAHLRAHQRT-HTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKP-YKCP--EC 167
Query: 336 LMSYVAKSSLYAHLKHVHSTNKIT 359
             S+  + +L  H +  H+  K +
Sbjct: 168 GKSFSRRDALNVHQR-THTGKKTS 190

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 208 CDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFK 267
           C +KGC K F   ++++ H  +H   P   VC  CGK F    +L+ H + VH   K F+
Sbjct: 8   CPHKGCTKMFRDNSAMRKH--LHTHGPRVHVCAECGKAFVESSKLKRH-QLVHTGEKPFQ 64
Query: 268 CTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK 325
           CT++GC   FS    L+ H +  H   R + CP   C K F +S +L+ H+L H + K
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE 323
           +   C + GC  +F   SA+++H  +     R+  C    CGK+F+ S  L+ H L H  
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH--GPRVHVC--AECGKAFVESSKLKRHQLVHTG 59
Query: 324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 357
            KP F C ++ C   +    +L  H++ +H+ ++
Sbjct: 60  EKP-FQCTFEGCGKRFSLDFNLRTHVR-IHTGDR 91

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
           P+MC Y GC K ++ ++ L+ H R H                                 K
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSRKHT------------------------------GEK 35
Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN 324
            ++C +  C+  FS    LKRH + +H  ++ F C   TC + F RS+HL+ H   H   
Sbjct: 36  PYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTGE 92
Query: 325 KPKFTCPYQDCLMSYVAKSSLYAH 348
           KP F+C +  C   +     L  H
Sbjct: 93  KP-FSCRWPSCQKKFARSDELVRH 115

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 37/178 (20%)
Query: 147 CDQKNCNKRFTTLSNLKMHMVR---HGKPLTLCCEELGCGRKFQTMK-QY--STHLKEHS 200
           C    C++ F +   L  H+     HG+     C   GC R+ +  K QY    H++ H+
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 201 NVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH 260
               P+ C ++GC KS+  + +LK+H R H                              
Sbjct: 64  G-EKPHKCTFEGCRKSYSRLENLKTHLRSHT----------------------------- 93
Query: 261 ESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHM 318
              K + C ++GC   FS  S   +H    H N + + C L  C K +     L++H+
Sbjct: 94  -GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 208 CDYKGCGKSFYLMASLKSH---QRVHVTNPEDLVC--KGCGKQ---FKVPCRLREHYKAV 259
           C + GC + F     L  H   + +H    E  VC   GC ++   FK    L  H +  
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKE-FVCHWGGCSRELRPFKAQYMLVVHMRR- 61
Query: 260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHML 319
           H   K  KCT++GC+  +S    LK H +S H   + + C    C K+F  +    +H  
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 354
           + + N+  + C    C   Y   SSL  H+K VH 
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 200 SNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAV 259
            + +A + CDY GCGK++   + LK+H R                               
Sbjct: 1   GSRTATHTCDYAGCGKTYTKSSHLKAHLRT------------------------------ 30
Query: 260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHML 319
           H   K + C +DGC   F+    L RH + KH   R F C    C ++F RS+HL  HM 
Sbjct: 31  HTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQ--KCDRAFSRSDHLALHMK 87
Query: 320 QH 321
           +H
Sbjct: 88  RH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN 322
           T    C Y GC   ++  S LK H ++ H   + + C    CG  F RS+ L  H  +H 
Sbjct: 4   TATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62
Query: 323 ENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
            ++P F C  Q C  ++     L  H+K
Sbjct: 63  GHRP-FQC--QKCDRAFSRSDHLALHMK 87

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 33/119 (27%)
Query: 203 SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHES 262
           +A + CDY GCGK++   + LK+H R                               H  
Sbjct: 3   TATHTCDYAGCGKTYTKSSHLKAHLRT------------------------------HTG 32
Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
            K + C +DGC   F+    L RH + KH   R F C    C ++F RS+HL  HM +H
Sbjct: 33  EKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQ--KCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN 322
           T    C Y GC   ++  S LK H ++ H   + + C    CG  F RS+ L  H  +H 
Sbjct: 3   TATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 323 ENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
            ++P F C  Q C  ++     L  H+K
Sbjct: 62  GHRP-FQC--QKCDRAFSRSDHLALHMK 86

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 262 STKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
            +    C + GC  +FS +  L  H K +H++ + F CP   CGKSF   +HL+EHM  H
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63
Query: 322 NENK 325
           ++ +
Sbjct: 64  SDTR 67

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 33/117 (28%)
Query: 206 YMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKN 265
           + CDY GC K +   + LK+H R H                                 K 
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHT------------------------------GEKP 45
Query: 266 FKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN 322
           +KCT++GC   F+    L RH + KH   + F C +  C +SF RS+HL  HM +H 
Sbjct: 46  YKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGV--CNRSFSRSDHLALHMKRHQ 99

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 32/150 (21%)
Query: 211 KGCGKSFYLMASLKSHQRV-HVTNPE--DLVCKGCGKQFKVPCRLREHYKAVHESTKNFK 267
           K C ++F  M  L +H  + HV  PE  + VC               +++      K+FK
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC---------------YWEECPREGKSFK 73
Query: 268 CTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPK 327
             Y   KL+   +          H   + FPCP   CGK F RSE+L+ H   H   KP 
Sbjct: 74  AKY---KLVNHIRV---------HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP- 120
Query: 328 FTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 357
           F C ++ C   +   S    H+ HVH+++K
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHM-HVHTSDK 149

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 79  WSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH 138
           + C   +C          + HL KH  ++PF CK        C  GF S H L RH  +H
Sbjct: 4   YICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCK-----EEGCEKGFTSLHHLTRHSLTH 58
Query: 139 DEDKKCYPCDQKNCNKRFTTLSNLKMHMVR 168
             +K  + CD   C+ RFTT +N+K H  R
Sbjct: 59  TGEKN-FTCDSDGCDLRFTTKANMKKHFNR 87

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 206 YMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHEST 263
           Y+C +  CG ++     L++H   H T  +   CK  GC K F     L  H    H   
Sbjct: 4   YICSFADCGAAYNKNWKLQAHLSKH-TGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTGE 61
Query: 264 KNFKCTYDGCKLLFSTKSALKRH 286
           KNF C  DGC L F+TK+ +K+H
Sbjct: 62  KNFTCDSDGCDLRFTTKANMKKH 84

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE 323
           K + C++  C   ++    L+ H  SKH   + FPC    C K F    HL  H L H  
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAH-LSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 60
Query: 324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 354
            K  FTC    C + +  K+++  H    H+
Sbjct: 61  EK-NFTCDSDGCDLRFTTKANMKKHFNRFHN 90

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 239 CKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFP 298
           C  CGK F     L++H +  H   K +KC    C   FS  S L++H ++ H   + + 
Sbjct: 7   CPECGKSFSQSSNLQKHQR-THTGEKPYKCPE--CGKSFSQSSDLQKHQRT-HTGEKPYK 62
Query: 299 CPLVTCGKSFLRSEHLQEHMLQHNENK 325
           CP   CGKSF RS+HL  H   H   K
Sbjct: 63  CP--ECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 182 CGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKG 241
           CG+ F+     STHL  HS+ + PY C Y  CGK F+  + +K H  +H T  +   C+ 
Sbjct: 7   CGKSFKRSSTLSTHLLIHSD-TRPYPCQY--CGKRFHQKSDMKKHTFIH-TGEKPHKCQV 62
Query: 242 CGKQFKVPCRLREHYK 257
           CGK F     L  H +
Sbjct: 63  CGKAFSQSSNLITHSR 78

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 177 CEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP-- 234
           C    CG+ F+   Q   H   H+    PY C ++GC K F L + LK H++VH   P  
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62
Query: 235 EDLVCKGCGKQF 246
           +D  C   GK +
Sbjct: 63  KDDSCSFVGKTW 74

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 177 CEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP-- 234
           C    CG+ F+   Q   H   H+    PY C ++GC K F L + LK H++VH   P  
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62
Query: 235 EDLVCKGCGKQF 246
           +D  C   GK +
Sbjct: 63  KDDSCSFVGKTW 74

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 145 YPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA 204
           Y C  ++C++RF+  ++L  H+  H       C    C R F      +TH++ H+    
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTG-EK 61
Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHV 231
           P+ CD   CG+ F      K H ++H+
Sbjct: 62  PFACDI--CGRKFARSDERKRHTKIHL 86

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-21
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-15
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-05
2ddh_A	661	Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundl	9e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
1w07_A	659	Acyl-COA oxidase; oxidoreductase, peroxisomal beta	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-04

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 94.6 bits (236), Expect = 2e-23
 Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 25/202 (12%)

Query: 99  HLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTT 158
                   + + C     +   C   +    KL  H+  H  +K  +PC ++ C K FT+
Sbjct: 3   EKALPVVYKRYIC-----SFADCGAAYNKNWKLQAHLCKHTGEKP-FPCKEEGCEKGFTS 56

Query: 159 LSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV-----SAPYMCDYK 211
           L +L  H + H G K  T  C+  GC  +F T      ++K+H N         Y+C ++
Sbjct: 57  LHHLTRHSLTHTGEKNFT--CDSDGCDLRFTT----KANMKKHFNRFHNIKICVYVCHFE 110

Query: 212 GCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCT 269
            CGK+F     LK HQ  H T      C   GC K+F +P RL+ H K VH      K  
Sbjct: 111 NCGKAFKKHNQLKVHQFSH-TQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKD- 167

Query: 270 YDGCKLLFSTKSALKRHNKSKH 291
            D C  +  T +   +H    H
Sbjct: 168 -DSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 82.3 bits (204), Expect = 7e-19
 Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 6/147 (4%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHES 262
            Y+C +  CG ++     L++H   H T  +   CK  GC K F     L  H    H  
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKH-TGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTG 69

Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM-FPCPLVTCGKSFLRSEHLQEHMLQH 321
            KNF C  DGC L F+TK+ +K+H    H      + C    CGK+F +   L+ H   H
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

Query: 322 NENKPKFTCPYQDCLMSYVAKSSLYAH 348
            +  P + CP++ C   +   S L  H
Sbjct: 130 TQQLP-YECPHEGCDKRFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 79.6 bits (197), Expect = 7e-18
 Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 10/167 (5%)

Query: 97  KIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRF 156
           + HL KH  ++PF C         C  GF S H L RH  +H  +K  + CD   C+ RF
Sbjct: 31  QAHLCKHTGEKPFPC-----KEEGCEKGFTSLHHLTRHSLTHTGEKN-FTCDSDGCDLRF 84

Query: 157 TTLSNLKMHMVRH--GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCG 214
           TT +N+K H  R    K     C    CG+ F+   Q   H   H+    PY C ++GC 
Sbjct: 85  TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCD 143

Query: 215 KSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHE 261
           K F L + LK H++VH           C    K      +H    H+
Sbjct: 144 KRFSLPSRLKRHEKVH-AGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE 323
           K + C++  C   ++    L+ H   KH   + FPC    C K F    HL  H L H  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69

Query: 324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 357
            K  FTC    C + +  K+++  H  +     K
Sbjct: 70  EKN-FTCDSDGCDLRFTTKANMKKH-FNRFHNIK 101

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 87.6 bits (218), Expect = 4e-21
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 16/156 (10%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRHG-----KPLTLCCEELGCGRKFQTMKQYSTHLK 197
                D   C++ F +   L  H+         K     C   GC R+ +  K     L 
Sbjct: 2   TDCRWDG--CSQEFDSQEQLVHHINSEHIHGERKEFV--CHWGGCSRELRPFKAQY-MLV 56

Query: 198 EHSNVSA---PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRL 252
            H        P+ C ++GC KS+  + +LK+H R H T  +  +C+  GC K F      
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH-TGEKPYMCEHEGCSKAFSNASDR 115

Query: 253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNK 288
            +H    H + K + C   GC   ++  S+L++H K
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)

Query: 103 HFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH-DEDKKCYPCDQKNCNKRFTTLSN 161
           H +++ F C       +  +  F +++ L+ HM  H  E  K + C  + C K ++ L N
Sbjct: 29  HGERKEFVCH--WGGCSRELRPFKAQYMLVVHMRRHTGE--KPHKCTFEGCRKSYSRLEN 84

Query: 162 LKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSN----VSAPYMCDYKGCGK 215
           LK H+  H G KP    CE  GC + F      ++   +H N       PY+C   GC K
Sbjct: 85  LKTHLRSHTGEKPYM--CEHEGCSKAFSN----ASDRAKHQNRTHSNEKPYVCKLPGCTK 138

Query: 216 SFYLMASLKSHQRVH 230
            +   +SL+ H +  
Sbjct: 139 RYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 15/155 (9%)

Query: 205 PYMCDYKGCGKSFYLMASLKSH---QRVHVTNPEDLVCKGCG-----KQFKVPCRLREHY 256
                  GC + F     L  H   + +H    ++ VC   G     + FK    L  H 
Sbjct: 3   DCRW--DGCSQEFDSQEQLVHHINSEHIH-GERKEFVCHWGGCSRELRPFKAQYMLVVHM 59

Query: 257 KAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQE 316
           +  H   K  KCT++GC+  +S    LK H +S H   + + C    C K+F  +    +
Sbjct: 60  R-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMCEHEGCSKAFSNASDRAK 117

Query: 317 HMLQ-HNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           H  + H+  KP + C    C   Y   SSL  H+K
Sbjct: 118 HQNRTHSNEKP-YVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 76.1 bits (188), Expect = 6e-17
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 21/164 (12%)

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTS---HDEDK--KCYPCDQKNCNKRFTTLSN 161
              +          C   F S+ +L+ H+ S   H E K   C+        + F     
Sbjct: 2   TDCRWD-------GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYM 54

Query: 162 LKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYL 219
           L +HM RH G KP    C   GC + +  ++   THL+ H+    PYMC+++GC K+F  
Sbjct: 55  LVVHMRRHTGEKPHK--CTFEGCRKSYSRLENLKTHLRSHTG-EKPYMCEHEGCSKAFSN 111

Query: 220 MASLKSHQ-RVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVH 260
            +    HQ R H +N +  VCK  GC K++  P  LR+H K VH
Sbjct: 112 ASDRAKHQNRTH-SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 71.5 bits (176), Expect = 3e-15
 Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 239 CKGCGKQFKVPCRLREHYKAVHEST--KNFKCTYDGCKLL---FSTKSALKRHNKSKHLN 293
             GC ++F    +L  H  + H     K F C + GC      F  +  L  H       
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH------- 58

Query: 294 MRM------FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYA 347
           MR         C    C KS+ R E+L+ H+  H   KP + C ++ C  ++   S    
Sbjct: 59  MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAK 117

Query: 348 HLKHVHSTNK 357
           H    HS  K
Sbjct: 118 HQNRTHSNEK 127

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFP-----CPLVTCGKSFLRSEHLQEHM 318
            + +   DGC   F ++  L  H  S+H++                 + F     L  HM
Sbjct: 2   TDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59

Query: 319 LQHNENKPKFTCPYQDCLMSYVAKSSLYAH 348
            +H   KP   C ++ C  SY    +L  H
Sbjct: 60  RRHTGEKP-HKCTFEGCRKSYSRLENLKTH 88

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 85.3 bits (212), Expect = 1e-20
 Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 16/128 (12%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
              C +KGC K F   ++++ H   H       VC  CGK F    +L+ H + VH   K
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKHLHTHGPRV--HVCAECGKAFVESSKLKRH-QLVHTGEK 61

Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM------FPCPLVTCGKSFLRSEHLQEHM 318
            F+CT++GC   FS    L+ H       +R+      + CP   C K F +S +L+ H+
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTH-------VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

Query: 319 LQHNENKP 326
           L H + K 
Sbjct: 115 LTHAKAKN 122

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 76.4 bits (189), Expect = 2e-17
 Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 15/121 (12%)

Query: 141 DKKCYPCDQKNCNKRFTTLSNLKMHMVRHG-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 199
           + +   C  K C K F   S ++ H+  HG +     C E  CG+ F      S+ LK H
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHV--CAE--CGKAFV----ESSKLKRH 53

Query: 200 SNV---SAPYMCDYKGCGKSFYLMASLKSHQRVHVT--NPEDLVCKGCGKQFKVPCRLRE 254
             V     P+ C ++GCGK F L  +L++H R+H T   P      GC K+F     L+ 
Sbjct: 54  QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH-TGDRPYVCPFDGCNKKFAQSTNLKS 112

Query: 255 H 255
           H
Sbjct: 113 H 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 66.4 bits (163), Expect = 8e-14
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 105 DKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKM 164
           + R   C      +  C   F     + +H+ +H    + + C +  C K F   S LK 
Sbjct: 2   EPRTIAC-----PHKGCTKMFRDNSAMRKHLHTHGP--RVHVCAE--CGKAFVESSKLKR 52

Query: 165 HMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV---SAPYMCDYKGCGKSFYL 219
           H + H G KP    C   GCG++F        +L+ H  +     PY+C + GC K F  
Sbjct: 53  HQLVHTGEKPFQ--CTFEGCGKRFSL----DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 106

Query: 220 MASLKSHQRVH 230
             +LKSH   H
Sbjct: 107 STNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.4 bits (119), Expect = 8e-08
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 15/90 (16%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM-----FPCPLVTCGKSFLRSEHLQEHM 318
           +   C + GC  +F   SA+++H       +         C    CGK+F+ S  L+ H 
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKH-------LHTHGPRVHVCA--ECGKAFVESSKLKRHQ 54

Query: 319 LQHNENKPKFTCPYQDCLMSYVAKSSLYAH 348
           L H   KP F C ++ C   +    +L  H
Sbjct: 55  LVHTGEKP-FQCTFEGCGKRFSLDFNLRTH 83

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 82.3 bits (204), Expect = 3e-19
 Identities = 38/157 (24%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 182 CGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVH--------VTN 233
            G   Q +KQ  +                K C ++F  M  L +H  +            
Sbjct: 3   SGSSGQPIKQELSCKWIDEA-QLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 59

Query: 234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLN 293
                C   GK FK   +L  H + VH   K F C + GC  +F+    LK H ++ H  
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTG 117

Query: 294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC 330
            + F C    C + F  S   ++HM  H  +K     
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS-GPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 42/157 (26%), Positives = 58/157 (36%), Gaps = 22/157 (14%)

Query: 213 CGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH---ESTKNFKCT 269
            G S   +    S + +          K C + F     L  H    H       N  C 
Sbjct: 3   SGSSGQPIKQELSCKWID-EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 270 YDGCKL---LFSTKSALKRHNKSKHLNMRM------FPCPLVTCGKSFLRSEHLQEHMLQ 320
           ++ C      F  K  L  H       +R+      FPCP   CGK F RSE+L+ H   
Sbjct: 62  WEECPREGKSFKAKYKLVNH-------IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

Query: 321 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK 357
           H   KP F C ++ C   +   S    H  HVH+++K
Sbjct: 115 HTGEKP-FKCEFEGCDRRFANSSDRKKH-MHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.8 bits (174), Expect = 5e-15
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 24/157 (15%)

Query: 85  NCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH------ 138
           +   +   +            +     K        C   F + H+L+ H+T        
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKK-------SCDRTFSTMHELVTHVTMEHVGGPE 54

Query: 139 DEDKKCYPCDQKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHL 196
             +  CY  +     K F     L  H+  H G KP    C   GCG+ F      S +L
Sbjct: 55  QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFP--CPFPGCGKIFAR----SENL 108

Query: 197 KEHSNV---SAPYMCDYKGCGKSFYLMASLKSHQRVH 230
           K H        P+ C+++GC + F   +  K H  VH
Sbjct: 109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 75.2 bits (186), Expect = 6e-17
 Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 33/144 (22%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV 202
           + + C    CNKR+  LS+L+MH  +H    T        G K                 
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKH----T--------GEK----------------- 35

Query: 203 SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHES 262
             PY CD+K C + F     LK HQR H T  +   CK C ++F     L+ H +  H  
Sbjct: 36  --PYQCDFKDCERRFSRSDQLKRHQRRH-TGVKPFQCKTCQRKFSRSDHLKTHTR-THTG 91

Query: 263 TKNFKCTYDGCKLLFSTKSALKRH 286
            K F C +  C+  F+    L RH
Sbjct: 92  EKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 67.9 bits (167), Expect = 2e-14
 Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 19/125 (15%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVT--NPEDLVCKGCGKQFKVPCRLREHYKAVHES 262
           P+MC Y GC K ++ ++ L+ H R H T   P     K C ++F    +L+ H +  H  
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSRKH-TGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTG 63

Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM------FPCPLVTCGKSFLRSEHLQE 316
            K F+C    C+  FS    LK H        R       F C   +C K F RS+ L  
Sbjct: 64  VKPFQCKT--CQRKFSRSDHLKTH-------TRTHTGEKPFSCRWPSCQKKFARSDELVR 114

Query: 317 HMLQH 321
           H   H
Sbjct: 115 HHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 16/105 (15%)

Query: 97  KIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRF 156
           ++H  KH  ++P++C     +   C   F    +L RH   H   K  + C    C ++F
Sbjct: 25  QMHSRKHTGEKPYQC-----DFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKT--CQRKF 76

Query: 157 TTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEH 199
           +   +LK H   H G KP +  C    C +KF      S  L  H
Sbjct: 77  SRSDHLKTHTRTHTGEKPFS--CRWPSCQKKFAR----SDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 16/91 (17%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM------FPCPLVTCGKSFLRSEHLQEH 317
           + F C Y GC   +   S L+ H        R       + C    C + F RS+ L+ H
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMH-------SRKHTGEKPYQCDFKDCERRFSRSDQLKRH 57

Query: 318 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 348
             +H   KP F C  + C   +     L  H
Sbjct: 58  QRRHTGVKP-FQC--KTCQRKFSRSDHLKTH 85

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 37/119 (31%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHEST- 263
            + CDY GC K +   + LK+H R H                                T 
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTH--------------------------------TG 42

Query: 264 -KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
            K +KCT++GC   F+    L RH   KH   + F C +  C +SF RS+HL  HM +H
Sbjct: 43  EKPYKCTWEGCDWRFARSDELTRH-YRKHTGAKPFQCGV--CNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 142 KKCYPCDQKNCNKRFTTLSNLKMHMVRHG--KPLTLCCEELGCGRKFQTMKQYSTHLKEH 199
           ++ + CD   C K +T  S+LK H+  H   KP    C   GC  +F    + + H ++H
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYK--CTWEGCDWRFARSDELTRHYRKH 70

Query: 200 SNVSAPYMCDYKGCGKSFYLMASLKSHQRVH 230
           +    P+ C    C +SF     L  H + H
Sbjct: 71  TGAK-PFQCGV--CNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE 323
           +   C Y GC  +++  S LK H    H   + + C    C   F RS+ L  H  +H  
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG 72

Query: 324 NKPKFTCPYQDCLMSYVAKSSLYAHLK 350
            KP F C    C  S+     L  H+K
Sbjct: 73  AKP-FQCG--VCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 66  SSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGF 125
           S + G + +K+++  C    C       +  K HL  H  ++P+KC         C W F
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKC-----TWEGCDWRF 57

Query: 126 FSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRH 169
               +L RH   H   K  + C    CN+ F+   +L +HM RH
Sbjct: 58  ARSDELTRHYRKHTGAKP-FQCGV--CNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 277 FSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 335
             +               R+  C    C K + +S HL+ H+  H   KP + C ++ C
Sbjct: 3   SGSSGPDLEK-------RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGC 53

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 37/119 (31%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHEST- 263
            + CDY GCGK++   + LK+H R H                                T 
Sbjct: 5   THTCDYAGCGKTYTKSSHLKAHLRTH--------------------------------TG 32

Query: 264 -KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
            K + C +DGC   F+    L RH   KH   R F C    C ++F RS+HL  HM +H
Sbjct: 33  EKPYHCDWDGCGWKFARSDELTRH-YRKHTGHRPFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.8 bits (133), Expect = 4e-10
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 142 KKCYPCDQKNCNKRFTTLSNLKMHMVRHG--KPLTLCCEELGCGRKFQTMKQYSTHLKEH 199
              + CD   C K +T  S+LK H+  H   KP    C+  GCG KF    + + H ++H
Sbjct: 3   TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYH--CDWDGCGWKFARSDELTRHYRKH 60

Query: 200 SNVSAPYMCDYKGCGKSFYLMASLKSHQRVH 230
           +    P+ C    C ++F     L  H + H
Sbjct: 61  TGHR-PFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN 322
           T    C Y GC   ++  S LK H    H   + + C    CG  F RS+ L  H  +H 
Sbjct: 3   TATHTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 323 ENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
            ++P F C    C  ++     L  H+K
Sbjct: 62  GHRP-FQCQ--KCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 81  CPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDE 140
           C    C  T    +  K HL  H  ++P+ C     +   C W F    +L RH   H  
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHC-----DWDGCGWKFARSDELTRHYRKHTG 62

Query: 141 DKKCYPCDQKNCNKRFTTLSNLKMHMVRH 169
            +  + C +  C++ F+   +L +HM RH
Sbjct: 63  HRP-FQCQK--CDRAFSRSDHLALHMKRH 88

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.6 bits (156), Expect = 3e-12
 Identities = 65/207 (31%), Positives = 83/207 (40%), Gaps = 25/207 (12%)

Query: 125 FFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGC 182
            F     +        +K  Y C +  C K F+   +L  H   H G KP    C E  C
Sbjct: 3   EFGSSSSVAQAALEPGEKP-YACPE--CGKSFSRSDHLAEHQRTHTGEKPYK--CPE--C 55

Query: 183 GRKFQTMKQYSTHLKEHSNV---SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVC 239
           G+ F         L  H        PY C    CGKSF   A+L++HQR H T  +   C
Sbjct: 56  GKSFS----DKKDLTRHQRTHTGEKPYKC--PECGKSFSQRANLRAHQRTH-TGEKPYAC 108

Query: 240 KGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPC 299
             CGK F     LR H +  H   K +KC    C   FS +  L  H ++ H   + + C
Sbjct: 109 PECGKSFSQLAHLRAHQR-THTGEKPYKCPE--CGKSFSREDNLHTHQRT-HTGEKPYKC 164

Query: 300 PLVTCGKSFLRSEHLQEHMLQHNENKP 326
           P   CGKSF R + L  H   H   K 
Sbjct: 165 P--ECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 59.8 bits (146), Expect = 7e-11
 Identities = 63/198 (31%), Positives = 81/198 (40%), Gaps = 25/198 (12%)

Query: 156 FTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV---SAPYMCDY 210
               S+         G KP    C E  CG+ F      S HL EH        PY C  
Sbjct: 3   EFGSSSSVAQAALEPGEKPYA--CPE--CGKSFS----RSDHLAEHQRTHTGEKPYKC-- 52

Query: 211 KGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY 270
             CGKSF     L  HQR H T  +   C  CGK F     LR H +  H   K + C  
Sbjct: 53  PECGKSFSDKKDLTRHQRTH-TGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPE 110

Query: 271 DGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC 330
             C   FS  + L+ H ++ H   + + CP   CGKSF R ++L  H   H   KP + C
Sbjct: 111 --CGKSFSQLAHLRAHQRT-HTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKP-YKC 164

Query: 331 PYQDCLMSYVAKSSLYAH 348
              +C  S+  + +L  H
Sbjct: 165 --PECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.7 bits (107), Expect = 9e-06
 Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 216 SFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKL 275
           S +  +S  +   +     +   C  CGK F     L EH +  H   K +KC    C  
Sbjct: 2   SEFGSSSSVAQAALE-PGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPE--CGK 57

Query: 276 LFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 335
            FS K  L RH ++ H   + + CP   CGKSF +  +L+ H   H   KP + CP  +C
Sbjct: 58  SFSDKKDLTRHQRT-HTGEKPYKCP--ECGKSFSQRANLRAHQRTHTGEKP-YACP--EC 111

Query: 336 LMSYVAKSSLYAH 348
             S+   + L AH
Sbjct: 112 GKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.6 bits (104), Expect = 3e-05
 Identities = 41/129 (31%), Positives = 54/129 (41%), Gaps = 25/129 (19%)

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
           +P+KC         C   F  +  L  H  +H  +K  Y C +  C K F+ L++L+ H 
Sbjct: 76  KPYKCP-------ECGKSFSQRANLRAHQRTHTGEKP-YACPE--CGKSFSQLAHLRAHQ 125

Query: 167 VRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA---PYMCDYKGCGKSFYLMA 221
             H G KP    C E  CG+ F        +L  H        PY C    CGKSF    
Sbjct: 126 RTHTGEKPYK--CPE--CGKSFS----REDNLHTHQRTHTGEKPYKC--PECGKSFSRRD 175

Query: 222 SLKSHQRVH 230
           +L  HQR H
Sbjct: 176 ALNVHQRTH 184

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.9 bits (146), Expect = 5e-12
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHML 319
              +    C + GC  +FS +  L  H K +H++ + F CP   CGKSF   +HL+EHM 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 320 QHNENKPKFTCP 331
            H++ +  + C 
Sbjct: 62  LHSDTRD-YICE 72

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 54.1 bits (131), Expect = 7e-10
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHM-VRHG--KPLTLCCEELGCGRKFQTMKQYSTHLKEH 199
              PCD   C + F+    L  H   +H   K  +  C E  CG+ F     +  HLKEH
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS--CPEPACGKSF----NFKKHLKEH 59

Query: 200 SNV---SAPYMCDYKGCGKSF 217
             +   +  Y+C++   G S 
Sbjct: 60  MKLHSDTRDYICEF--SGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 297 FPCPLVTCGKSFLRSEHLQEHM-LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST 355
            PC    CG+ F   ++L  H   QH   K  F+CP   C  S+  K  L  H   +HS 
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEH-MKLHSD 65

Query: 356 NK 357
            +
Sbjct: 66  TR 67

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 24/104 (23%), Positives = 32/104 (30%), Gaps = 32/104 (30%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
              CD+ GCG+ F     L  H++                               H   K
Sbjct: 7   GMPCDFPGCGRIFSNRQYLNHHKKY-----------------------------QHIHQK 37

Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSF 308
           +F C    C   F+ K  LK H K  H + R + C     G S 
Sbjct: 38  SFSCPEPACGKSFNFKKHLKEHMKL-HSDTRDYICE--FSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 18/82 (21%), Positives = 25/82 (30%), Gaps = 11/82 (13%)

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
               C         C   F ++  L  H       +K + C +  C K F    +LK HM
Sbjct: 6   SGMPCDFPG-----CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

Query: 167 VRHG--KPLTLCCEELGCGRKF 186
             H   +     CE    G   
Sbjct: 61  KLHSDTRDYI--CEF--SGPSS 78

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 206 YMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHEST 263
           Y+C ++ CGK+F     LK HQ  H T      C   GC K+F +P RL+ H K VH   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSH-TQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGY 59

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKH 291
              K   D C  +  T +   +H    H
Sbjct: 60  PCKKD--DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 28/116 (24%), Positives = 37/116 (31%), Gaps = 32/116 (27%)

Query: 145 YPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA 204
           Y C  +NC K F   + LK+H   H                        T          
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSH------------------------TQQL------- 30

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH 260
           PY C ++GC K F L + LK H++VH           C    K      +H    H
Sbjct: 31  PYECPHEGCDKRFSLPSRLKRHEKVH-AGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.1 bits (123), Expect = 8e-09
 Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 4/88 (4%)

Query: 266 FKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK 325
           + C ++ C   F   + LK H +  H     + CP   C K F     L+ H   H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 326 PKFTCPYQDCLMSYVAKSSLYAHLKHVH 353
                    C       +    H+   H
Sbjct: 61  C-KKD--DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 296 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 348
           M+ C    CGK+F +   L+ H   H +  P + CP++ C   +   S L  H
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRH 52

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 22/91 (24%), Positives = 29/91 (31%), Gaps = 11/91 (12%)

Query: 81  CPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDE 140
           C   NC       N  K+H   H  + P++C      +  C   F    +L RH   H  
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQQLPYEC-----PHEGCDKRFSLPSRLKRHEKVHAG 58

Query: 141 DK--KCYPCDQKNCNKRFTTLSNLKMHMVRH 169
               K   C      K +T    LK     H
Sbjct: 59  YPCKKDDSCSF--VGKTWTLY--LKHVAECH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 15/93 (16%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHS 200
           + Y C  ++C++RF+   +L  H+  H G KP    C    C R F      S HL  H 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQ--CRI--CMRNF----SRSDHLTTHI 54

Query: 201 NV---SAPYMCDYKGCGKSFYLMASLKSHQRVH 230
                  P+ CD   CG+ F      K H ++H
Sbjct: 55  RTHTGEKPFACDI--CGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.4 bits (132), Expect = 6e-10
 Identities = 27/117 (23%), Positives = 37/117 (31%), Gaps = 35/117 (29%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
           PY C  + C + F    SL  H R+H T  +   C+ C + F     L  H +  H   K
Sbjct: 4   PYACPVESCDRRFSQSGSLTRHIRIH-TGQKPFQCRICMRNFSRSDHLTTHIR-THTGEK 61

Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
            F C                                   CG+ F RS+  + H   H
Sbjct: 62  PFACD---------------------------------ICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 18/93 (19%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM------FPCPLVTCGKSFLRSEHLQEH 317
           + + C  + C   FS   +L RH       +R+      F C    C ++F RS+HL  H
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRH-------IRIHTGQKPFQCR--ICMRNFSRSDHLTTH 53

Query: 318 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 350
           +  H   KP F C    C   +        H K
Sbjct: 54  IRTHTGEKP-FACD--ICGRKFARSDERKRHTK 83

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 58.3 bits (142), Expect = 6e-11
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREH--YKAVHES 262
              C    C K F     LK H R H T  +   C  CGK +     L EH     ++ S
Sbjct: 7   GVEC--PTCHKKFLSKYYLKVHNRKH-TGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHM 318
            + F C+   C+  F  +  L+ H  S H     + C   +C + F++ + LQ HM
Sbjct: 64  EQVFTCSV--CQETFRRRMELRLHMVS-HTGEMPYKCS--SCSQQFMQKKDLQSHM 114

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 23/130 (17%)

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM 166
              +C         C   F SK+ L  H   H  +K  + C +  C K +    NL  H 
Sbjct: 6   SGVECP-------TCHKKFLSKYYLKVHNRKHTGEKP-FECPK--CGKCYFRKENLLEHE 55

Query: 167 VRHG-----KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMA 221
            R+      +  T  C    C   F+   +   H+  H+    PY C    C + F    
Sbjct: 56  ARNCMNRSEQVFT--CSV--CQETFRRRMELRLHMVSHTG-EMPYKC--SSCSQQFMQKK 108

Query: 222 SLKSHQ-RVH 230
            L+SH  ++H
Sbjct: 109 DLQSHMIKLH 118

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 8/89 (8%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH--ES 262
              C  + CGK F  +  L  H+  H +  +   C  CG +FK   R+  H    H    
Sbjct: 7   GVAC--EICGKIFRDVYHLNRHKLSH-SGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSV 62

Query: 263 TKNFKCTYDGCKLLFSTKSALKRHNKSKH 291
            K + C    C   FS    L  H K  H
Sbjct: 63  GKPYICQS--CGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 10/93 (10%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN- 322
               C    C  +F     L RH  S H   + + CP   CG  F R + +  H+  H+ 
Sbjct: 6   SGVACEI--CGKIFRDVYHLNRHKLS-HSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDG 60

Query: 323 -ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 354
              KP + C  Q C   +     L  H+K VHS
Sbjct: 61  SVGKP-YIC--QSCGKGFSRPDHLNGHIKQVHS 90

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHML 319
               ++  C++ GC   +   S LK H +  H   + F C    C + F RS+ L  H  
Sbjct: 12  SSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRR 70

Query: 320 QH 321
            H
Sbjct: 71  TH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 281 SALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 335
           S+     +     +R   C    CGK++ +S HL+ H   H   KP F+C ++ C
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGC 55

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 160 SNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA---PYMCDYKGCGKS 216
           S      +   +  +  C   GCG+ +      S+HLK H+       P+ C +KGC + 
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFK----SSHLKAHTRTHTGEKPFSCSWKGCERR 58

Query: 217 FYLMASLKSHQRVH 230
           F     L  H+R H
Sbjct: 59  FARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 31/97 (31%)

Query: 190 KQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVP 249
              S    + S     ++C + GCGK+++  + LK+H R H                   
Sbjct: 3   SGSSGPQIDSSR-IRSHICSHPGCGKTYFKSSHLKAHTRTH------------------- 42

Query: 250 CRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRH 286
                      E  K F C++ GC+  F+    L RH
Sbjct: 43  ---------TGE--KPFSCSWKGCERRFARSDELSRH 68

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.5 bits (116), Expect = 6e-08
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
           + + C  + C   FS    L RH    H   + F C +  C ++F RS+HL  H+  H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRH-IRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.7 bits (101), Expect = 6e-06
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 155 RFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCG 214
               ++NL  ++V   +P    C    C R+F    + + H++ H+    P+ C    C 
Sbjct: 2   EPHPMNNLLNYVVPKMRPYA--CPVESCDRRFSRSDELTRHIRIHTGQK-PFQCRI--CM 56

Query: 215 KSFYLMASLKSHQRVH 230
           ++F     L +H R H
Sbjct: 57  RNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 93  LNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNC 152
           +N    +++     RP+ C         C   F    +L RH+  H   K  + C    C
Sbjct: 6   MNNLLNYVVPK--MRPYAC-----PVESCDRRFSRSDELTRHIRIHTGQKP-FQCRI--C 55

Query: 153 NKRFTTLSNLKMHMVRH 169
            + F+   +L  H+  H
Sbjct: 56  MRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 193 STHLKEHSNVSA-PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCR 251
             +L  +      PY C  + C + F     L  H R+H T  +   C+ C + F     
Sbjct: 6   MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIH-TGQKPFQCRICMRNFSRSDH 64

Query: 252 LREHYK 257
           L  H +
Sbjct: 65  LTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 287 NKSKHLNMRM------FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP 331
           +   +L   +      + CP+ +C + F RS+ L  H+  H   KP F C 
Sbjct: 4   HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCR 53

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 127 SKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRH--GKPLTLCCEELGCGR 184
             + LL ++       + Y C  ++C++RF+    L  H+  H   KP    C    C R
Sbjct: 5   PMNNLLNYVVPKM---RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ--CRI--CMR 57

Query: 185 KFQTMKQYSTHLKEHS 200
            F      +TH++ H+
Sbjct: 58  NFSRSDHLTTHIRTHT 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 107 RPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDK--KCYPCDQKNCNKRFTTLSNLKM 164
              +C++       C +    K  L  H   H E      +PC+   C KRF    ++  
Sbjct: 6   SGLQCEI-------CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAA 56

Query: 165 HMVRHGKPLTLCCEE 179
           H  +    L L  +E
Sbjct: 57  HRSKSHPALLLAPQE 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDL--VCKGCGKQFKVPCRLREHYKAVHES 262
              C+   CG +    ASL  HQR H      L   C+ CGK+F+ P  +  H    H +
Sbjct: 7   GLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 263 TKNFKCTYDG 272
                    G
Sbjct: 65  LLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 13/102 (12%), Positives = 26/102 (25%), Gaps = 32/102 (31%)

Query: 145 YPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA 204
             C+   C       ++L  H  +H + +                               
Sbjct: 8   LQCEI--CGFTCRQKASLNWHQRKHAETV---------AAL------------------- 37

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQF 246
            + C++  CGK F    S+ +H+            +  G   
Sbjct: 38  RFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 6/69 (8%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNK--SKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
              +C    C      K++L  H +  ++ +    FPC    CGK F + + +  H  + 
Sbjct: 6   SGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKS 61

Query: 322 NENKPKFTC 330
           +        
Sbjct: 62  HPALLLAPQ 70

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 9e-08
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 19/95 (20%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHS 200
           K + C    C + F+   +L  H+  H G KP    C+   CGRKF      S   K H 
Sbjct: 2   KPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFA--CDI--CGRKFAR----SDERKRHR 51

Query: 201 NV--SAPYMCDYKGCGKSFYLMASLKSHQ---RVH 230
           ++    P + D     +       L++     +  
Sbjct: 52  DIQHILPILEDK--VEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 7/84 (8%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
           P+ C    C ++F     L +H R H T  +   C  CG++F      + H    H    
Sbjct: 3   PFQCRI--CMRNFSRSDHLTTHIRTH-TGEKPFACDICGRKFARSDERKRHRDIQHI--L 57

Query: 265 NFKCTYDGCKLLFSTKSALKRHNK 288
                    + L S    L+    
Sbjct: 58  PILEDK--VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 19/94 (20%), Positives = 26/94 (27%), Gaps = 21/94 (22%)

Query: 264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRM------FPCPLVTCGKSFLRSEHLQEH 317
           K F+C    C   FS    L  H       +R       F C    CG+ F RS+  + H
Sbjct: 2   KPFQCRI--CMRNFSRSDHLTTH-------IRTHTGEKPFACD--ICGRKFARSDERKRH 50

Query: 318 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH 351
               +   P                  L   +  
Sbjct: 51  RDIQHI-LP-ILE--DKVEELLSKNYHLENEVAR 80

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSK-HLNMRMFPCPLVTCGKSFLRSEHLQEHM 318
            E    ++C    C  +++  S   RH  +    N++++PCP   C K F R +++  H+
Sbjct: 5   KEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHV 60

Query: 319 LQHNE 323
              ++
Sbjct: 61  KIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHV-TNPEDLVCKGCGKQFKVPCRLREHYKAVHE 261
            Y C    C + +  +++   H       N +   C  C K+F     +  H K +H+
Sbjct: 10  TYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 33/86 (38%)

Query: 145 YPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA 204
           Y C    C++ +T +SN   H V                                 NV  
Sbjct: 11  YRCKV--CSRVYTHISNFCRHYVTS----------------------------HKRNVK- 39

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
            Y C +  C K F    ++ +H ++ 
Sbjct: 40  VYPCPF--CFKEFTRKDNMTAHVKII 63

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 46.6 bits (112), Expect = 4e-07
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHS 200
             + C+   C K F+    LK HM  H G KP    C+   C          + HL+ HS
Sbjct: 7   GPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYK--CKT--CDYAAADSSSLNKHLRIHS 60

Query: 201 NVSAPYMCDYKGCGKSFYLMASLKSHQRVH 230
           +   P+ C  + C  +    + L  H R H
Sbjct: 61  D-ERPFKC--QICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 26/122 (21%), Positives = 36/122 (29%), Gaps = 37/122 (30%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
           P+ C  + CGK F     LK+H R H T  +   CK C         L +H   +H   +
Sbjct: 8   PHKC--EVCGKCFSRKDKLKTHMRCH-TGVKPYKCKTCDYAAADSSSLNKH-LRIHSDER 63

Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN 324
            FKC                                   C  +   S  L  H+  H  +
Sbjct: 64  PFKCQI---------------------------------CPYASRNSSQLTVHLRSHTGD 90

Query: 325 KP 326
             
Sbjct: 91  SG 92

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 13/95 (13%)

Query: 177 CEELGCGRKFQTMKQYSTHLKEHSNV---SAPYMCDYKGCGKSFYLMASLKSHQRVHVTN 233
           CE   CG+ F         LK H        PY C  K C  +    +SL  H R+H ++
Sbjct: 11  CEV--CGKCFS----RKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIH-SD 61

Query: 234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC 268
                C+ C    +   +L  H +  H        
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLR-SHTGDSGPSS 95

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.1 bits (113), Expect = 4e-07
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 12/110 (10%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
            Y C    CGKSF   +    H  +H        C  CGK+FK+   L  H K +H   K
Sbjct: 10  LYPCQ---CGKSFTHKSQRDRHMSMH-LGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIK 64

Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHL 314
            ++C    C   F  + +  RH        + +        ++   +   
Sbjct: 65  PYECNI--CAKRFMWRDSFHRH---VTSCTKSYEAA--KAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 21/109 (19%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRH-G-KPLTLCCEELGCGRKFQTMKQYSTHLKEHS 200
           K YPC    C K FT  S    HM  H G +P    C    CG+KF    +   HL  H 
Sbjct: 9   KLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYG--CGV--CGKKF----KMKHHLVGHM 57

Query: 201 NV---SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQF 246
            +     PY C    C K F    S   H+ V  +  +        +  
Sbjct: 58  KIHTGIKPYEC--NICAKRFMWRDSF--HRHVT-SCTKSYEAAKAEQNT 101

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 31/126 (24%), Positives = 43/126 (34%), Gaps = 38/126 (30%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTK 264
            ++C  K CG+ F    +L  H+R H T+     C  C K F+    LR+H + +H   K
Sbjct: 17  EFIC--KFCGRHFTKSYNLLIHERTH-TDERPYTCDICHKAFRRQDHLRDH-RYIHSKEK 72

Query: 265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN 324
            FKC                                   CGK F +S  L  H   H + 
Sbjct: 73  PFKCQ---------------------------------ECGKGFCQSRTLAVHKTLHMQT 99

Query: 325 KPKFTC 330
               T 
Sbjct: 100 SS-PTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 17/115 (14%)

Query: 160 SNLKMHMVRHG--KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV---SAPYMCDYKGCG 214
           S      +     K     C+   CGR F      S +L  H        PY C    C 
Sbjct: 3   SGSSGGRLPSKTKKEFI--CKF--CGRHFT----KSYNLLIHERTHTDERPYTC--DICH 52

Query: 215 KSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT 269
           K+F     L+ H+ +H +  +   C+ CGK F     L  H K +H  T +    
Sbjct: 53  KAFRRQDHLRDHRYIH-SKEKPFKCQECGKGFCQSRTLAVH-KTLHMQTSSPTAA 105

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 34/99 (34%)

Query: 130 KLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTM 189
                  +H  +K  Y C    C+ RFT    +KMH+++                     
Sbjct: 2   SSGSSGRTHSGEKP-YECYI--CHARFTQSGTMKMHILQK-------------------- 38

Query: 190 KQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQR 228
                    H+   A + C +  C       + L  H R
Sbjct: 39  ---------HTENVAKFHCPH--CDTVIARKSDLGVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 304 CGKSFLRSEHLQEHMLQHN-ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 354
           C   F +S  ++ H+LQ + EN  KF CP+  C      KS L  HL+  HS
Sbjct: 21  CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 7/59 (11%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDL---VCKGCGKQFKVPCRLREHYKAVH 260
           PY C    C   F    ++K H     T  E++    C  C         L  H +  H
Sbjct: 15  PYECYI--CHARFTQSGTMKMHILQKHT--ENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 222 SLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH--ESTKNFKCTYDGCKLLFST 279
           S  S  R H +  +   C  C  +F     ++ H       E+   F C +  C  + + 
Sbjct: 2   SSGSSGRTH-SGEKPYECYICHARFTQSGTMKMH-ILQKHTENVAKFHCPH--CDTVIAR 57

Query: 280 KSALKRHNKSKH 291
           KS L  H + +H
Sbjct: 58  KSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 10/73 (13%)

Query: 95  TFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH-DEDKKCYPCDQKNCN 153
           +       H  ++P++C +       C   F     +  H+     E+   + C    C+
Sbjct: 2   SSGSSGRTHSGEKPYECYI-------CHARFTQSGTMKMHILQKHTENVAKFHCPH--CD 52

Query: 154 KRFTTLSNLKMHM 166
                 S+L +H+
Sbjct: 53  TVIARKSDLGVHL 65

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 33/116 (28%)

Query: 131 LLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMK 190
                 +H  +K  Y C    C+K F     L MH                         
Sbjct: 3   SGSSGRTHTGEKP-YACSH--CDKTFRQKQLLDMHF------------------------ 35

Query: 191 QYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQF 246
               +   +  V A ++C    CGK+F    ++  H       P+ +  +  G   
Sbjct: 36  --KRYHDPNF-VPAAFVC--SKCGKTFTRRNTMARHADNC-AGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 6/68 (8%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDL---VCKGCGKQFKVPCRLREHYKAVHE 261
           PY C    C K+F     L  H + +          VC  CGK F     +  H      
Sbjct: 15  PYAC--SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NCA 71

Query: 262 STKNFKCT 269
                +  
Sbjct: 72  GPDGVEGE 79

>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A* Length = 661

 Score = 46.4 bits (110), Expect = 9e-06
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 6/63 (9%)

Query: 1   RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYE------DEEDAITEAL 54
              VK   +      D + + VL  L +LYS + + +    F E       +   +   +
Sbjct: 533 YVVVKVFSDKLPKIQDKAVQAVLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARI 592

Query: 55  QSL 57
             L
Sbjct: 593 LEL 595

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 193 STHLKEHSNVSA---PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVP 249
             H   HS+++    PY CD   C  SF    +L SH+ VH T  +   C  CG QF  P
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDR--CQASFRYKGNLASHKTVH-TGEKPYRCNICGAQFNRP 58

Query: 250 CRLREH 255
             L+ H
Sbjct: 59  ANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 15/76 (19%)

Query: 160 SNLKMHMVRHG--KPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA---PYMCDYKGCG 214
            +   H       KP    C+   C   F+    Y  +L  H  V     PY C    CG
Sbjct: 3   HHHHHHSHMTHSDKPYK--CDR--CQASFR----YKGNLASHKTVHTGEKPYRC--NICG 52

Query: 215 KSFYLMASLKSHQRVH 230
             F   A+LK+H R+H
Sbjct: 53  AQFNRPANLKTHTRIH 68

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 261 ESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQ 320
           E+ + ++C    C    S+      H +          CP   C   F   E  QEH  +
Sbjct: 12  ENKEVYQCRL--CNAKLSSLLEQGSHERLCR---NAAVCPY--CSLRFFSPELKQEHESK 64

Query: 321 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT 359
                 K TC   +C+ ++ +  S++ H   VH+ N + 
Sbjct: 65  CEYK--KLTCL--ECMRTFKSSFSIWRHQVEVHNQNNMA 99

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 23/109 (21%), Positives = 32/109 (29%), Gaps = 9/109 (8%)

Query: 197 KEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHY 256
                    Y C    C      +    SH+R+        VC  C  +F  P   +EH 
Sbjct: 8   ASPVENKEVYQCRL--CNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEH- 61

Query: 257 KAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCG 305
                  K   C    C   F +  ++ RH    H    M P    + G
Sbjct: 62  -ESKCEYKKLTCLE--CMRTFKSSFSIWRHQVEVHNQNNMAPTSGPSSG 107

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 35/88 (39%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV 202
               C +  C+   ++ + L++H   H            C  +                 
Sbjct: 8   HPEKCSE--CSYSCSSKAALRIHERIH------------CTDR----------------- 36

Query: 203 SAPYMCDYKGCGKSFYLMASLKSHQRVH 230
             P+ C+Y  C       ++L  H +  
Sbjct: 37  --PFKCNY--CSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYK 257
           P  C    C  S    A+L+ H+R+H        C  C    K P  L +H K
Sbjct: 9   PEKCSE--CSYSCSSKAALRIHERIH-CTDRPFKCNYCSFDTKQPSNLSKHMK 58

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.1 bits (95), Expect = 6e-05
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 17/91 (18%)

Query: 145 YPCDQKNCNKRFTTLSNLKMHMVRH--GKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNV 202
           + C    C K F   S L  H++ H   +P    C+   CG++F       + +K+H+ +
Sbjct: 2   FDCKI--CGKSFKRSSTLSTHLLIHSDTRPYP--CQY--CGKRFH----QKSDMKKHTFI 51

Query: 203 ---SAPYMCDYKGCGKSFYLMASLKSHQRVH 230
                P+ C  + CGK+F   ++L +H R H
Sbjct: 52  HTGEKPHKC--QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.7 bits (94), Expect = 7e-05
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 177 CEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPED 236
           C+   CG+ F+     STHL  HS+ + PY C Y  CGK F+  + +K H  +H T  + 
Sbjct: 4   CKI--CGKSFKRSSTLSTHLLIHSD-TRPYPCQY--CGKRFHQKSDMKKHTFIH-TGEKP 57

Query: 237 LVCKGCGKQFKVPCRLREH 255
             C+ CGK F     L  H
Sbjct: 58  HKCQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 37/116 (31%)

Query: 206 YMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKN 265
           + C  K CGKSF   ++L +H  +H ++     C+ CGK+F     +++H   +H   K 
Sbjct: 2   FDC--KICGKSFKRSSTLSTHLLIH-SDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKP 57

Query: 266 FKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH 321
            KC                                   CGK+F +S +L  H  +H
Sbjct: 58  HKCQ---------------------------------VCGKAFSQSSNLITHSRKH 80

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREH 255
           PY C    CGK+F   + L  HQRVH T  +   C  CGK F     L  H
Sbjct: 14  PYGC--VECGKAFSRSSILVQHQRVH-TGEKPYKCLECGKAFSQNSGLINH 61

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 4/102 (3%)

Query: 222 SLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAV-HESTKNFKCTYDGCKLLFSTK 280
           S K +  +  T      CK C   +     L  H     H    N +   +  K     +
Sbjct: 6   SGKLYGSIF-TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 281 SALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN 322
                  + K    ++  C    CG SF   + L  HM++  
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 7/95 (7%)

Query: 134 HMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHM--VRHGKPLTLCCEELGCGRKFQTMKQ 191
           + +      K + C    C+  + TL  L +HM    H +      +     R  +  K+
Sbjct: 10  YGSIFTGASK-FRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 192 YSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSH 226
               ++   +      C Y  CG SF  +  L  H
Sbjct: 67  SLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVH 99

>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A* Length = 659

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 7/64 (10%)

Query: 1   RFAVKKLLE-FAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYE------DEEDAITEA 53
              V K +    QD      +  L  L  +Y+ + L KHL  F         +     + 
Sbjct: 529 LIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQ 588

Query: 54  LQSL 57
           L+SL
Sbjct: 589 LRSL 592

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVH 260
            ++C+   C ++F     LK H R H TN +   C  C + F     L  H + +H
Sbjct: 2   SFVCEV--CTRAFARQEHLKRHYRSH-TNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 15/74 (20%), Positives = 20/74 (27%), Gaps = 7/74 (9%)

Query: 232 TNPEDLVCKGCGKQFKVPCRLREHYKAVH---ESTKNFKCTYDGCKLL---FSTKSALKR 285
                   K C + F     L  H    H       N  C ++ C      F  K  L  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 286 HNKSKHLNMRMFPC 299
           H +  H   +  P 
Sbjct: 81  HIRV-HTGEKSGPS 93

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.8 bits (89), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREH 255
            Y CD   CGKSF   + L  H+R H T  +   C  CGK F     L  H
Sbjct: 18  RYKCDE--CGKSFSHSSDLSKHRRTH-TGEKPYKCDECGKAFIQRSHLIGH 65

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 43/245 (17%)

Query: 3   AVKKLLEFAQDTDDVSARNVLTKLAVL-YSTWSLEKHLATF-----YEDEEDAITEALQS 56
            ++  L    +  +   R +  +L+V   S       L+         D    + +  + 
Sbjct: 358 IIESSLN-VLEPAEY--RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 57  LGINKEYFISSTGGKNSKKQQLWSCPIVNCNFTSVNLNTFKIH--LLKHFDKRPFKCKLT 114
             + K+            K+   S P +         N + +H  ++ H+     K   +
Sbjct: 415 SLVEKQP-----------KESTISIPSIYLELKVKLENEYALHRSIVDHY--NIPKTFDS 461

Query: 115 TANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLT 174
                P +  +F  H +  H+ + +  ++         + RF  L   K   +RH    T
Sbjct: 462 DDLIPPYLDQYFYSH-IGHHLKNIEHPERMTLFRMVFLDFRF--LEQ-K---IRHDS--T 512

Query: 175 LCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNP 234
                       Q +K Y  ++ ++       +         F     L   +   + + 
Sbjct: 513 AWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI----LDF-----LPKIEENLICSK 563

Query: 235 E-DLV 238
             DL+
Sbjct: 564 YTDLL 568

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 194 THLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVH 230
           +     +    P+ C + GCG  F     L  H+R H
Sbjct: 2   SSGSSGTG-EKPFACTWPGCGWRFSRSDELSRHRRSH 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.58
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.55
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.49
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.49
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.49
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.47
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.46
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.45
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.44
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.43
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.42
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.37
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.3
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.27
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.05
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.02
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.02
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.02
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.02
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.99
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.98
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.97
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.97
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.96
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.94
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.93
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.93
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.92
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.89
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.89
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.88
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.87
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.81
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.81
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.79
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.74
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.73
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.71
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.68
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.66
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.63
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.61
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.6
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.59
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.56
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.56
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.53
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.52
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.43
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.4
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.36
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.35
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.32
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.31
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.3
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.29
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.28
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.28
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.25
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.23
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.2
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.2
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.17
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.14
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.13
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.12
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.11
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.36
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.32
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.02
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.01
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.0
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.97
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.96
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.96
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.95
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.95
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.95
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.93
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.15
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.88
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.85
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.0
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.65
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.81
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.6
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.54
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.34
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.14
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.64
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.47
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.39
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.33
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.02
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.65
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.66
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.48
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	84.91
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.73
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	80.22

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.9e-37  Score=252.08  Aligned_cols=183  Identities=31%  Similarity=0.629  Sum_probs=139.9

Q ss_pred             HHHHHHHHHHhCCCCccccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccccChHHHHHHhhhhcCCCCccc
Q psy1773         159 LSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLV  238 (359)
Q Consensus       159 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~  238 (359)
                      ...|..|+..+.++++|.|..  |++.|.+...|..|++.|.+ +++|.|+.  |++.|.+...|..|+++|+ ++++|.
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~~~~~   79 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTG-EKPYKCPE--CGKSFSDKKDLTRHQRTHT-GEKPYK   79 (190)
T ss_dssp             ---------------------------CCSSHHHHHGGGCC----CCEECTT--TCCEESSHHHHHHHHHHHH-CCCCEE
T ss_pred             hccchhhhhhcCCCCCCcCCC--CccccCCHHHHHHHHHHcCC-CCCccCCC--cCchhCCHHHHHHHHHhcC-CCCCcc
Confidence            456788888899999999999  99999999999999999886 78999987  9999999999999999984 558899


Q ss_pred             cCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHH
Q psy1773         239 CKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       239 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      |+.|++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+
T Consensus        80 C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~  153 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQR-THTGEKPYACPE--CGKSFSQLAHLRAHQR-THTGEKPYKCPE--CGKSFSREDNLHTHQ  153 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHH-HHHTCCCEECTT--TCCEESSHHHHHHHHH-HHHCCCCEECTT--TCCEESCHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHH-hcCCCCCCcCCC--CCCccCCHHHHHHHHH-HhCCCCCeECCC--CCcccCCHHHHHHHH
Confidence            9999999999999999988 888999999976  9999999999999998 689999999998  999999999999999


Q ss_pred             HhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         319 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       319 ~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ++|++++ +|.|++  |++.|.++..|.+|++.|++++
T Consensus       154 ~~H~~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          154 RTHTGEK-PYKCPE--CGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             HHHHCCC-CEECTT--TCCEESSHHHHHHHHTTC----
T ss_pred             HhcCCCC-CeECCC--CCCccCCHHHHHHHHHhcCCCC
Confidence            9999998 699999  9999999999999999998875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=4.2e-36  Score=245.17  Aligned_cols=182  Identities=33%  Similarity=0.648  Sum_probs=86.5

Q ss_pred             hHHHhHHhhhCCCCccccccCCCCCccchhhcccHHHHHhhhhhcCCCCCccccCCCccchhhcCHHHHHHHHHHhCCCC
Q psy1773          94 NTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSHDEDKKCYPCDQKNCNKRFTTLSNLKMHMVRHGKPL  173 (359)
Q Consensus        94 ~~l~~H~~~h~~~~~~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~c~c~~C~~~f~~~~~l~~H~~~h~~~~  173 (359)
                      ..|..|+..|.+++||.|++       |++.|.+...|..|++.|++. .+|.|.  .|++.|.+...|..|++.|.+. 
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~-------C~~~f~~~~~l~~H~~~h~~~-~~~~C~--~C~~~f~~~~~l~~H~~~h~~~-   75 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPE-------CGKSFSRSDHLAEHQRTHTGE-KPYKCP--ECGKSFSDKKDLTRHQRTHTGE-   75 (190)
T ss_dssp             -------------------------------CCSSHHHHHGGGCC----CCEECT--TTCCEESSHHHHHHHHHHHHCC-
T ss_pred             ccchhhhhhcCCCCCCcCCC-------CccccCCHHHHHHHHHHcCCC-CCccCC--CcCchhCCHHHHHHHHHhcCCC-
Confidence            44566666666777777766       666666666666666666554 344444  5555555555555555555444 


Q ss_pred             ccccccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHH
Q psy1773         174 TLCCEELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLR  253 (359)
Q Consensus       174 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~  253 (359)
                                                    ++|.|++  |++.|.+...|..|+++|+ ++++|.|++|++.|.+...|.
T Consensus        76 ------------------------------~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~  122 (190)
T 2i13_A           76 ------------------------------KPYKCPE--CGKSFSQRANLRAHQRTHT-GEKPYACPECGKSFSQLAHLR  122 (190)
T ss_dssp             ------------------------------CCEECTT--TCCEESCHHHHHHHHHHHH-TCCCEECTTTCCEESSHHHHH
T ss_pred             ------------------------------CCccCcc--cCCccCCHHHHHHHHHhcC-CCCCCcCCCCCCccCCHHHHH
Confidence                                          4455543  5555555555555555552 335555555555555555555


Q ss_pred             HHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         254 EHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       254 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      .|++ +|.++++|.|++  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|+|++
T Consensus       123 ~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~-~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          123 AHQR-THTGEKPYKCPE--CGKSFSREDNLHTHQR-THTGEKPYKCPE--CGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             HHHH-HHHCCCCEECTT--TCCEESCHHHHHHHHH-HHHCCCCEECTT--TCCEESSHHHHHHHHTTC----
T ss_pred             HHHH-HhCCCCCeECCC--CCcccCCHHHHHHHHH-hcCCCCCeECCC--CCCccCCHHHHHHHHHhcCCCC
Confidence            5554 555555666644  6666666666666655 355556666665  6666666666666666666655

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=7.1e-32  Score=220.04  Aligned_cols=162  Identities=25%  Similarity=0.556  Sum_probs=88.6

Q ss_pred             chhhcCChHHHHHHHHHcCCCCCCccc--cCCCCCccccChHHHHHHhhhhcCCCCccccC--CcCccCCChHHHHHHHH
Q psy1773         182 CGRKFQTMKQYSTHLKEHSNVSAPYMC--DYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYK  257 (359)
Q Consensus       182 C~~~f~~~~~l~~H~~~h~~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~  257 (359)
                      |++.|.+...|..|++.|.+ +++|.|  +.  |++.|.+...|..|+++| .++++|.|.  .|++.|.+...|..|++
T Consensus        20 C~~~f~~~~~L~~H~~~h~~-~~~~~C~~~~--C~~~f~~~~~l~~H~~~h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~   95 (190)
T 1tf6_A           20 CGAAYNKNWKLQAHLCKHTG-EKPFPCKEEG--CEKGFTSLHHLTRHSLTH-TGEKNFTCDSDGCDLRFTTKANMKKHFN   95 (190)
T ss_dssp             TCCBCSSHHHHHHHHHHHHC-CCSSCCSSTT--CCCCCSSHHHHHHHHTTT-TTCCCEECCSSSCCCEESCHHHHHHHHH
T ss_pred             CcchhCCHHHHHHHHHhcCC-CCCccCCCCC--CChhhCCHHHHHHHHHHc-cCCCceeCCCCCCCCccCCHHHHHHHHH
Confidence            55555555555555555543 455555  33  555555555555555555 333555555  55555555555666653


Q ss_pred             HHc-cCCCcccc--ccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCC
Q psy1773         258 AVH-ESTKNFKC--TYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQD  334 (359)
Q Consensus       258 ~~H-~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~  334 (359)
                      ..| .++++|.|  +.  |++.|.+...|..|++ .|.+++||.|++..|++.|.+...|..|+++|++    |.|....
T Consensus        96 ~~h~~~~~~~~C~~~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~----~~C~~~~  168 (190)
T 1tf6_A           96 RFHNIKICVYVCHFEN--CGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDD  168 (190)
T ss_dssp             TTSSTTTSCCEECSSS--SCEECSSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS----CCCCSTT
T ss_pred             HhcCCCcceeeCCCCC--CccccCCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC----CcCCCCC
Confidence            345 34555666  43  6666666666666655 3555666666322366666666666666666555    4442211


Q ss_pred             -ccccccchhhHHHHHhhhcC
Q psy1773         335 -CLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       335 -C~~~f~~~~~l~~H~~~hh~  354 (359)
                       |++.|.+...|.+|++.||+
T Consensus       169 ~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          169 SCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             TCCCCCSCHHHHHHHHTTCC-
T ss_pred             cCCCccccHHHHHHHHHhhcC
Confidence             66666666666666666655

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=1.1e-31  Score=218.96  Aligned_cols=174  Identities=28%  Similarity=0.559  Sum_probs=142.2

Q ss_pred             CccccCCCccchhhcCHHHHHHHHHHhCCCCcccc--ccccchhhcCChHHHHHHHHHcCCCCCCccccCCCCCccccCh
Q psy1773         143 KCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCC--EELGCGRKFQTMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLM  220 (359)
Q Consensus       143 ~~~~c~c~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~  220 (359)
                      ++|.|.|+.|++.|.+...|..|++.|.++++|.|  ..  |++.|.+...|..|++.|.+ +++|.|+.+.|++.|.+.
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG--CEKGFTSLHHLTRHSLTHTG-EKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTT--CCCCCSSHHHHHHHHTTTTT-CCCEECCSSSCCCEESCH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCC--CChhhCCHHHHHHHHHHccC-CCceeCCCCCCCCccCCH
Confidence            56777666888888888888888888888888888  67  88888888888888888886 788888722399999999


Q ss_pred             HHHHHHh-hhhcCCCCcccc--CCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCccc
Q psy1773         221 ASLKSHQ-RVHVTNPEDLVC--KGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMF  297 (359)
Q Consensus       221 ~~l~~H~-~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~  297 (359)
                      ..|..|+ +.|..+..+|.|  +.|++.|.+...|..|++ +|++++||.|+++.|++.|.+...|..|++ .|++   |
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~---~  162 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---Y  162 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHHHHHHHHT-SSCS---C
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHHHHHHHHH-HhCC---C
Confidence            9999998 555356678999  889999999999999977 899999999953349999999999999998 5777   7


Q ss_pred             CCCCC-CcCcccCChHHHHHHHHhhcCC
Q psy1773         298 PCPLV-TCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       298 ~C~~~-~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      .|... .|++.|.+...|..|+++|+++
T Consensus       163 ~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          163 PCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             cCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            77531 1899999999999999998874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=3e-28  Score=191.89  Aligned_cols=145  Identities=28%  Similarity=0.524  Sum_probs=108.1

Q ss_pred             CCccccCCCCCccccChHHHHHHhh---hhcCCCCccccCC-----cCccCCChHHHHHHHHHHccCCCccccccCCcCc
Q psy1773         204 APYMCDYKGCGKSFYLMASLKSHQR---VHVTNPEDLVCKG-----CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKL  275 (359)
Q Consensus       204 ~~~~C~~~~C~~~f~~~~~l~~H~~---~h~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~  275 (359)
                      .+|.|+.  |++.|.+...|..|++   +| .+.++|.|.+     |++.|.+...|..|++ +|.++++|.|++++|++
T Consensus         2 ~~~~C~~--C~~~f~~~~~L~~H~~~~h~h-~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~   77 (155)
T 2gli_A            2 TDCRWDG--CSQEFDSQEQLVHHINSEHIH-GERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRK   77 (155)
T ss_dssp             CBCCBTT--CCCBCSCHHHHHHHHHHHTSS-SCSSCCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHCCCCCCCCSTTCCC
T ss_pred             CcCCcCC--CccccCCHHHHHHHHHhhccC-CCCcceeCCCCCccchhhhhhhHHHHHHHHH-hcCCCCCccCCCCCCCC
Confidence            3455654  6666666666666666   34 4446666553     3488888888888877 78888888886445888


Q ss_pred             cccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHH-HhhcCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         276 LFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHM-LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       276 ~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      .|.+...|..|++ .|.++++|.|++..|++.|.+...|..|+ ++|++++ +|.|++++|+++|.+.+.|.+|++.|||
T Consensus        78 ~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~-~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           78 SYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK-PYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCSSHHHHHHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC-CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cccCHHHHHHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC-CeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            8888888888887 58888888887445888888888888887 7788777 6888665688888888888888888875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.9e-27  Score=187.22  Aligned_cols=109  Identities=26%  Similarity=0.456  Sum_probs=92.8

Q ss_pred             CCccccChHHHHHHhhhhcCCCCccccCC--cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccccc
Q psy1773         213 CGKSFYLMASLKSHQRVHVTNPEDLVCKG--CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSK  290 (359)
Q Consensus       213 C~~~f~~~~~l~~H~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~  290 (359)
                      |++.|.+...|..|+++| .++++|.|++  |++.|.+...|..|++ +|.++++|.|++++|++.|.+...|..|++..
T Consensus        45 c~~~f~~~~~l~~H~~~h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           45 ELRPFKAQYMLVVHMRRH-TGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             TTCCCSSHHHHHHHTHHH-HCCCCCCCCSTTCCCCCSSHHHHHHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             hhhhhhhHHHHHHHHHhc-CCCCCccCCCCCCCCcccCHHHHHHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence            568899999999999888 4558899985  9999999999999987 78889999996445999999999999998437


Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      |+++++|.|+++.|++.|.+...|..|+++|+|
T Consensus       123 H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999654599999999999999998875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.3e-24  Score=164.17  Aligned_cols=118  Identities=25%  Similarity=0.569  Sum_probs=105.3

Q ss_pred             CCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccccc--ccCCcccCCCCCCcCcccC
Q psy1773         232 TNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSK--HLNMRMFPCPLVTCGKSFL  309 (359)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~--H~~~~~~~C~~~~C~~~f~  309 (359)
                      .+.++|.|++|++.|.+...|..|++ +|.++++|.|++  |++.|.+...|..|++.+  |.++++|.|++  |++.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~   77 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFR   77 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEES
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccC
Confidence            35678999999999999999999987 888899999976  999999999999998752  57889999998  999999


Q ss_pred             ChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         310 RSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       310 ~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      +...|..|+++|++++ +|.|++  |++.|.+...|.+|++.+|++..
T Consensus        78 ~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           78 RRMELRLHMVSHTGEM-PYKCSS--CSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             SHHHHHHHHHHHSSSC-SEECSS--SCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CHHHHHHHHHHcCCCC-CccCCC--ccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999998 799999  99999999999999998777653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=1e-24  Score=163.60  Aligned_cols=114  Identities=29%  Similarity=0.668  Sum_probs=102.0

Q ss_pred             CCCCccccCC--cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccC
Q psy1773         232 TNPEDLVCKG--CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFL  309 (359)
Q Consensus       232 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~  309 (359)
                      .++++|.|.+  |++.|.+...|..|++ +|.++++|.|+++.|++.|.+...|..|++ .|.++++|.|+.  |++.|.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~   77 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKT--CQRKFS   77 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTT--TCCEES
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCc--cCchhC
Confidence            3567899987  9999999999999988 898999999973359999999999999998 588999999998  999999


Q ss_pred             ChHHHHHHHHhhcCCCCceec--cCCCccccccchhhHHHHHhhh
Q psy1773         310 RSEHLQEHMLQHNENKPKFTC--PYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       310 ~~~~l~~H~~~h~~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      +...|..|+++|++++ +|.|  +.  |++.|.+...|.+|+++|
T Consensus        78 ~~~~l~~H~~~h~~~~-~~~C~~~~--C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           78 RSDHLKTHTRTHTGEK-PFSCRWPS--CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CHHHHHHHHHHHHTCC-CEECCSTT--CCCEESSHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHhcCCC-CeeCCCCC--CccccCCHHHHHHHHhcC
Confidence            9999999999999988 6999  67  999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=3e-24  Score=162.22  Aligned_cols=117  Identities=26%  Similarity=0.609  Sum_probs=75.4

Q ss_pred             CccccC--CcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChH
Q psy1773         235 EDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE  312 (359)
Q Consensus       235 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  312 (359)
                      ++|.|+  .|++.|.+...|..|++ +| ++++|.|++  |++.|.+...|..|++ .|.++++|.|++..|++.|.+..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAE--CGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHG-GG-SCCCEECTT--TCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHH-Hc-CCCCeECCC--CCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHH
Confidence            556666  67777777777777765 56 566677755  7777777777777766 46666777775323777777777


Q ss_pred             HHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         313 HLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       313 ~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      .|..|+++|++++ +|.|++.+|++.|.+.+.|.+|++.|++++.
T Consensus        79 ~l~~H~~~h~~~~-~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           79 NLRTHVRIHTGDR-PYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHHHHHHCCC-CCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHHHHHHhCCCC-ceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            7777777777766 5777422377777777777777777766543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=3.9e-24  Score=161.56  Aligned_cols=121  Identities=35%  Similarity=0.685  Sum_probs=102.5

Q ss_pred             CCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHh
Q psy1773         203 SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSA  282 (359)
Q Consensus       203 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~  282 (359)
                      +++|.|+++.|++.|.+...|..|+++|  +.++|.|.+|++.|.+...|..|++ +|.++++|.|+++.|++.|.+...
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH--GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG--SCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc--CCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHH
Confidence            5789998445999999999999999998  5588999999999999999999987 899999999975569999999999


Q ss_pred             hhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCce
Q psy1773         283 LKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF  328 (359)
Q Consensus       283 l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  328 (359)
                      |..|++ .|.++++|.|++..|++.|.+...|..|+++|++++ ++
T Consensus        80 l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k-~~  123 (124)
T 1ubd_C           80 LRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK-NN  123 (124)
T ss_dssp             HHHHHH-HHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHH-HhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc-cC
Confidence            999998 699999999952239999999999999999999988 45

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=1.2e-23  Score=165.37  Aligned_cols=124  Identities=27%  Similarity=0.513  Sum_probs=96.7

Q ss_pred             CCCccccCCCCCccccChHHHHHHhhhhcCCCCc--------cccCCcCccCCChHHHHHHHHHHccCCCccccccCCcC
Q psy1773         203 SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPED--------LVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCK  274 (359)
Q Consensus       203 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~  274 (359)
                      ..+|.|..  |++.|.+...|..|+++++.+..+        |.|.+|++.|.+...|..|++ +|.++++|.|.+++|+
T Consensus        23 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           23 QLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTTC
T ss_pred             hccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCCC
Confidence            46677775  888888888888888773344333        788888888888888888877 7888888888644588


Q ss_pred             ccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         275 LLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       275 ~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      +.|.+...|..|++ .|.++++|.|++..|++.|.+...|..|+++|++++ +|.|.
T Consensus       100 ~~f~~~~~L~~H~~-~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k-~~~c~  154 (155)
T 2rpc_A          100 KIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK-SGPSS  154 (155)
T ss_dssp             CEESCHHHHHHHHT-TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC-CSCSC
T ss_pred             CccCCHHHHHHHHH-hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC-CCCCC
Confidence            88888888888887 588888888874348888888888888888888888 68774

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=1.8e-24  Score=164.09  Aligned_cols=109  Identities=21%  Similarity=0.514  Sum_probs=98.0

Q ss_pred             HHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCc
Q psy1773         225 SHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTC  304 (359)
Q Consensus       225 ~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C  304 (359)
                      .|..+| .|+++|.|++|+++|.....|..|++ +|++++||+|++  |++.|.+...|..|++ .|++++||.|+.  |
T Consensus        12 h~~~~h-~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~--C   84 (133)
T 2lt7_A           12 HYELIV-DGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRY--CEKVFPLAEYRTKHEI-HHTGERRYQCLA--C   84 (133)
T ss_dssp             EEEEEE-TTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSS--SSCEESSHHHHHHHHH-HHHTCCCEEESS--S
T ss_pred             hceeec-CCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCc--cCeecccccchhhhcc-ccCCCccccCCC--C
Confidence            345556 67799999999999999999999988 899999999976  9999999999999998 699999999998  9


Q ss_pred             CcccCChHHHHHHHHhhcCCCC-----ceeccCCCccccccch
Q psy1773         305 GKSFLRSEHLQEHMLQHNENKP-----KFTCPYQDCLMSYVAK  342 (359)
Q Consensus       305 ~~~f~~~~~l~~H~~~h~~~~~-----~~~C~~~~C~~~f~~~  342 (359)
                      ++.|.+...|..|+++|++++|     +|.|.+  |++.|...
T Consensus        85 ~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~--C~k~~~~~  125 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHP--CRSLQIRQ  125 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCTTSSSCCEEECC--CCSSCCCC
T ss_pred             CCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCC--CCchhhhc
Confidence            9999999999999999987653     599999  99988754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=2.6e-23  Score=155.85  Aligned_cols=113  Identities=35%  Similarity=0.759  Sum_probs=101.1

Q ss_pred             CCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccC--CcCccCCChHHHHHHHHHHccCCCccccccCCcCccccC
Q psy1773         202 VSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFST  279 (359)
Q Consensus       202 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~  279 (359)
                      ++++|.|.++.|++.|.+...|..|+++| .++++|.|+  .|++.|.+...|..|++ +|.++++|.|++  |++.|.+
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~   78 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKH-TGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKT--CQRKFSR   78 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHH-HTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTT--TCCEESC
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhh-CCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCc--cCchhCC
Confidence            36889998556999999999999999998 456889999  79999999999999988 799999999976  9999999


Q ss_pred             hHhhhccccccccCCcccCC--CCCCcCcccCChHHHHHHHHhh
Q psy1773         280 KSALKRHNKSKHLNMRMFPC--PLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       280 ~~~l~~H~~~~H~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      ...|..|++ .|.++++|.|  +.  |++.|.+...|..|+++|
T Consensus        79 ~~~l~~H~~-~h~~~~~~~C~~~~--C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           79 SDHLKTHTR-THTGEKPFSCRWPS--CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHH-HHHTCCCEECCSTT--CCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHH-HhcCCCCeeCCCCC--CccccCCHHHHHHHHhcC
Confidence            999999998 6899999999  66  999999999999999886

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2e-22  Score=152.16  Aligned_cols=115  Identities=30%  Similarity=0.547  Sum_probs=97.3

Q ss_pred             CCCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHH--HccCCCccccccCCcCccccC
Q psy1773         202 VSAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKA--VHESTKNFKCTYDGCKLLFST  279 (359)
Q Consensus       202 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~C~~~~C~~~f~~  279 (359)
                      ++.+|.|+.  |++.|.+...|..|+++| .++++|.|++|++.|.+...|..|++.  .|.++++|.|++  |++.|.+
T Consensus         4 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~   78 (124)
T 2dlq_A            4 GSSGVECPT--CHKKFLSKYYLKVHNRKH-TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRR   78 (124)
T ss_dssp             CCSSCCCTT--TCCCCSSHHHHHHHHHHH-SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESS
T ss_pred             CCCCCCCCC--CCCcCCCHHHHHHHHHhC-CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCC
Confidence            367889986  999999999999999888 455889999999999999999999874  257788899976  9999999


Q ss_pred             hHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHh-hcCC
Q psy1773         280 KSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQ-HNEN  324 (359)
Q Consensus       280 ~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~  324 (359)
                      ...|..|++ .|.+++||.|++  |++.|.+...|..|++. |.++
T Consensus        79 ~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           79 RMELRLHMV-SHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHH-HHSSSCSEECSS--SCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHH-HcCCCCCccCCC--ccchhCCHHHHHHHHHHHCCCC
Confidence            999999998 588889999988  99999999999999875 5443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=4.9e-22  Score=156.13  Aligned_cols=121  Identities=32%  Similarity=0.500  Sum_probs=91.5

Q ss_pred             CccccccccchhhcCChHHHHHHHHHcCCCCC--------CccccCCCCCccccChHHHHHHhhhhcCCCCccccCC--c
Q psy1773         173 LTLCCEELGCGRKFQTMKQYSTHLKEHSNVSA--------PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKG--C  242 (359)
Q Consensus       173 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~--C  242 (359)
                      .+|.|..  |++.|.+...|..|++.++....        .|.|++  |++.|.+...|..|+++| .++++|.|.+  |
T Consensus        24 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h-~~~~~~~C~~~~C   98 (155)
T 2rpc_A           24 LSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVH-TGEKPFPCPFPGC   98 (155)
T ss_dssp             CSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHH-HCCCSEECSCTTT
T ss_pred             ccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhc-CCCCcccCCcCCC
Confidence            3344444  44444444444444444221122        378886  999999999999999998 4568899988  9


Q ss_pred             CccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCC
Q psy1773         243 GKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCP  300 (359)
Q Consensus       243 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  300 (359)
                      ++.|.....|..|++ +|+++++|.|.+++|++.|.+...|..|++ .|++++||.|.
T Consensus        99 ~~~f~~~~~L~~H~~-~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~c~  154 (155)
T 2rpc_A           99 GKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS  154 (155)
T ss_dssp             CCEESCHHHHHHHHT-TTCSSCSBCCSSTTCCCCBSSHHHHHHSST-TTTSCCCSCSC
T ss_pred             CCccCCHHHHHHHHH-hhCCCCCccCCCCCCCCccCCHHHHHHHHH-HhcCCCCCCCC
Confidence            999999999999987 899999999975469999999999999998 68899999885

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=4.2e-22  Score=151.07  Aligned_cols=92  Identities=25%  Similarity=0.551  Sum_probs=87.4

Q ss_pred             HHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCcc
Q psy1773         257 KAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCL  336 (359)
Q Consensus       257 ~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~  336 (359)
                      ..+|.|+++|+|++  |++.|.+...|..|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  ||
T Consensus        14 ~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--C~   85 (133)
T 2lt7_A           14 ELIVDGRVYYICIV--CKRSYVCLTSLRRHFN-IHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGER-RYQCLA--CG   85 (133)
T ss_dssp             EEEETTEEEEEETT--TCCEESCHHHHHHHHH-HHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCC-CEEESS--SC
T ss_pred             eeecCCCcCeECCC--CCCCcCCHHHHHHHHH-HcCCCCCeeCCc--cCeecccccchhhhccccCCCc-cccCCC--CC
Confidence            44789999999976  9999999999999999 699999999999  9999999999999999999999 799999  99


Q ss_pred             ccccchhhHHHHHhhhcCCC
Q psy1773         337 MSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       337 ~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ++|.+.+.|..|++.||+++
T Consensus        86 k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           86 KSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             CEESSHHHHHHHHHHHTCCC
T ss_pred             CCcCCHHHHHHHhHHhcCCC
Confidence            99999999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2.9e-20  Score=131.76  Aligned_cols=89  Identities=27%  Similarity=0.569  Sum_probs=68.9

Q ss_pred             CCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccc
Q psy1773         262 STKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVA  341 (359)
Q Consensus       262 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~  341 (359)
                      +++||.|+++.|++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+++|++++ +|.|+.  |++.|.+
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~   74 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEK-PFACDI--CGRKFAR   74 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCC-CEECTT--TCCEESS
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCC-CccCCC--CCchhCC
Confidence            356788864458888888888888887 577788888887  8888888888888888888877 688888  8888888


Q ss_pred             hhhHHHHHhhhcCCC
Q psy1773         342 KSSLYAHLKHVHSTN  356 (359)
Q Consensus       342 ~~~l~~H~~~hh~~~  356 (359)
                      .+.|.+|++.|++++
T Consensus        75 ~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           75 SDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHHGGGGC--
T ss_pred             HHHHHHHHHHhcccC
Confidence            888888888887765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.4e-19  Score=128.62  Aligned_cols=89  Identities=27%  Similarity=0.514  Sum_probs=62.6

Q ss_pred             ccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccc
Q psy1773         260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSY  339 (359)
Q Consensus       260 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f  339 (359)
                      +.++++|.|++  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+++|++++ +|.|++  |++.|
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f   74 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMR-CHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDER-PFKCQI--CPYAS   74 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGG-GCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCC-CEECSS--SSCEE
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHH-hcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCC-CccCCC--CCCcc
Confidence            34566777755  7777777777777776 466667777776  7777777777777777777766 577777  77777


Q ss_pred             cchhhHHHHHhhhcCCC
Q psy1773         340 VAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       340 ~~~~~l~~H~~~hh~~~  356 (359)
                      .+...|.+|++.|+++.
T Consensus        75 ~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           75 RNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             SSHHHHHHHHTTCCSCC
T ss_pred             CCHHHHHHHHHHhcCCC
Confidence            77777777777777654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=5.9e-19  Score=129.02  Aligned_cols=92  Identities=27%  Similarity=0.574  Sum_probs=81.4

Q ss_pred             CCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCCh
Q psy1773         232 TNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRS  311 (359)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~  311 (359)
                      ..+++|.|.+|++.|.....|..|++ +|.++++|.|.+  |++.|.....|..|++ .|.++++|.|..  |++.|.+.
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~   86 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDI--CHKAFRRQDHLRDHRY-IHSKEKPFKCQE--CGKGFCQS   86 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSS--SCCBCSCHHHHHHHGG-GSCCCCTTSCSS--SCCCCSSH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCC--ccchhCCHHHHHHHHH-HhCCCCCeECCC--cCCcccCH
Confidence            34578999999999999999999987 888899999976  9999999999999998 688999999998  99999999


Q ss_pred             HHHHHHHHhhcCCCCceec
Q psy1773         312 EHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       312 ~~l~~H~~~h~~~~~~~~C  330 (359)
                      ..|..|+++|++++ +|.+
T Consensus        87 ~~L~~H~~~H~~~~-~~~~  104 (106)
T 2ee8_A           87 RTLAVHKTLHMQTS-SPTA  104 (106)
T ss_dssp             HHHHHHHHHTTSCC-CCCC
T ss_pred             HHHHHHHHHhCCCC-CCcC
Confidence            99999999999988 5754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=1.8e-19  Score=133.81  Aligned_cols=104  Identities=22%  Similarity=0.347  Sum_probs=87.3

Q ss_pred             hHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHH--ccCCCcc-ccccCCcCccc--cChHhhhccccccccCC
Q psy1773         220 MASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAV--HESTKNF-KCTYDGCKLLF--STKSALKRHNKSKHLNM  294 (359)
Q Consensus       220 ~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~--H~~~~~~-~C~~~~C~~~f--~~~~~l~~H~~~~H~~~  294 (359)
                      ...|..|+++| .++++|.|.+|++.|.....|..|++ +  |.+.+++ .|++  |++.|  .....|..|++ .|.++
T Consensus         4 ~~~l~~H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~-~H~~~   78 (115)
T 2dmi_A            4 GSSGKLYGSIF-TGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEG-KEDAQ   78 (115)
T ss_dssp             CCCCCCCCCCC-CCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCC-SCCCC
T ss_pred             chhhhhheeee-CCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCC--CCcccccccHHHHHHHhh-ccCCC
Confidence            34577889888 56689999999999999999999988 6  6666665 4976  99988  89999999998 69999


Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      +||.|++  |++.|.+...|..|+++|+... ...++
T Consensus        79 ~~~~C~~--C~k~f~~~~~L~~H~~~hh~~~-~~~~~  112 (115)
T 2dmi_A           79 KVLKCMY--CGHSFESLQDLSVHMIKTKHYQ-KVSGP  112 (115)
T ss_dssp             SSCBCSS--SCCBCSSHHHHHHHHHHTTTTT-CSCCC
T ss_pred             cceECCC--CCCccCCHHHHHHHHHHhCCcc-cCCCC
Confidence            9999998  9999999999999999988766 34444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=4e-19  Score=127.41  Aligned_cols=89  Identities=27%  Similarity=0.537  Sum_probs=75.2

Q ss_pred             CCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCCh
Q psy1773         232 TNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRS  311 (359)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~  311 (359)
                      +++++|.|.+|++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|++ .|.++++|.|++  |++.|.+.
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~   77 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKT--CDYAAADSSSLNKHLR-IHSDERPFKCQI--CPYASRNS   77 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSS--SCCEESSHHHHHHHHH-HSCCCCCEECSS--SSCEESSH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCC--CCCccCCHHHHHHHHH-HhCCCCCccCCC--CCCccCCH
Confidence            45678888888888888888888877 788888888876  8888888888888888 588888888888  88888888


Q ss_pred             HHHHHHHHhhcCCCC
Q psy1773         312 EHLQEHMLQHNENKP  326 (359)
Q Consensus       312 ~~l~~H~~~h~~~~~  326 (359)
                      ..|..|+++|+++++
T Consensus        78 ~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           78 SQLTVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHHHHTTCCSCCC
T ss_pred             HHHHHHHHHhcCCCC
Confidence            888888888888774

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=1.6e-20  Score=139.59  Aligned_cols=101  Identities=19%  Similarity=0.273  Sum_probs=90.4

Q ss_pred             hHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccccc--ccCCccc-CCCCCCcCccc--CChHHHHHHHHhhcC
Q psy1773         249 PCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSK--HLNMRMF-PCPLVTCGKSF--LRSEHLQEHMLQHNE  323 (359)
Q Consensus       249 ~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~--H~~~~~~-~C~~~~C~~~f--~~~~~l~~H~~~h~~  323 (359)
                      ...|..|++ +|++++||.|..  |++.|.+...|..|++ .  |.+.+++ .|+.  |++.|  .....|..|+++|++
T Consensus         4 ~~~l~~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~   77 (115)
T 2dmi_A            4 GSSGKLYGS-IFTGASKFRCKD--CSAAYDTLVELTVHMN-ETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDA   77 (115)
T ss_dssp             CCCCCCCCC-CCCCCCSEEBSS--SSCEESSHHHHHHHHH-HTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCC
T ss_pred             chhhhhhee-eeCCCCCEECCc--cCchhcCHHHHHHHHH-HhCccccCCCccCCC--CCcccccccHHHHHHHhhccCC
Confidence            345778876 899999999976  9999999999999998 5  6666655 5998  99999  999999999999999


Q ss_pred             CCCceeccCCCccccccchhhHHHHHhhhcCCCCC
Q psy1773         324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI  358 (359)
Q Consensus       324 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~~  358 (359)
                      ++ ||.|++  |++.|.+...|.+|++.||...++
T Consensus        78 ~~-~~~C~~--C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           78 QK-VLKCMY--CGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CS-SCBCSS--SCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             Cc-ceECCC--CCCccCCHHHHHHHHHHhCCcccC
Confidence            99 799999  999999999999999999988765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=5.1e-19  Score=122.89  Aligned_cols=82  Identities=28%  Similarity=0.617  Sum_probs=60.0

Q ss_pred             ccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhh
Q psy1773         265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSS  344 (359)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~  344 (359)
                      ||.|++  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+++|++++ +|.|+.  |++.|.+.+.
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~   72 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLL-IHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEK-PHKCQV--CGKAFSQSSN   72 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHH-HHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCC-CEECTT--TSCEESSHHH
T ss_pred             CccCCC--CcccccCchhHHHHHH-HcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCC-CCcCCC--cchhhCChHH
Confidence            466765  7777777777777776 467777777777  7777777777777777777777 577777  7777777777


Q ss_pred             HHHHHhhhcC
Q psy1773         345 LYAHLKHVHS  354 (359)
Q Consensus       345 l~~H~~~hh~  354 (359)
                      |.+|++.|+|
T Consensus        73 l~~H~~~H~g   82 (82)
T 2kmk_A           73 LITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHHhhCC
Confidence            7777777764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=2.1e-18  Score=126.02  Aligned_cols=90  Identities=28%  Similarity=0.607  Sum_probs=84.3

Q ss_pred             ccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccc
Q psy1773         260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSY  339 (359)
Q Consensus       260 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f  339 (359)
                      ..++++|.|.+  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++++ +|.|.+  |++.|
T Consensus        12 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f   83 (106)
T 2ee8_A           12 SKTKKEFICKF--CGRHFTKSYNLLIHER-THTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEK-PFKCQE--CGKGF   83 (106)
T ss_dssp             CCCCCCCBCSS--SCCBCSSHHHHHHHHH-HHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCC-TTSCSS--SCCCC
T ss_pred             cCCCcCeECCC--CCCccCCHHHHHHHHH-HcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCC-CeECCC--cCCcc
Confidence            35678999987  9999999999999999 699999999999  9999999999999999999999 799999  99999


Q ss_pred             cchhhHHHHHhhhcCCCC
Q psy1773         340 VAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       340 ~~~~~l~~H~~~hh~~~~  357 (359)
                      .+...|.+|++.|++++.
T Consensus        84 ~~~~~L~~H~~~H~~~~~  101 (106)
T 2ee8_A           84 CQSRTLAVHKTLHMQTSS  101 (106)
T ss_dssp             SSHHHHHHHHHHTTSCCC
T ss_pred             cCHHHHHHHHHHhCCCCC
Confidence            999999999999998764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=8.4e-19  Score=121.79  Aligned_cols=82  Identities=35%  Similarity=0.703  Sum_probs=71.9

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHH
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQ  315 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~  315 (359)
                      ||.|.+|++.|.+...|..|++ +|.++++|.|+.  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~   74 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQY--CGKRFHQKSDMKKHTF-IHTGEKPHKCQV--CGKAFSQSSNLI   74 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSS--SCCEESSHHHHHHHHH-HHHTCCCEECTT--TSCEESSHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCc--CChhhCCHHHHHHHHH-HhcCCCCCcCCC--cchhhCChHHHH
Confidence            5789999999999999999987 788888999976  9999999999999988 588889999988  999999999999


Q ss_pred             HHHHhhcC
Q psy1773         316 EHMLQHNE  323 (359)
Q Consensus       316 ~H~~~h~~  323 (359)
                      .|+++|+|
T Consensus        75 ~H~~~H~g   82 (82)
T 2kmk_A           75 THSRKHTG   82 (82)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHhhCC
Confidence            99998875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=9.8e-19  Score=123.76  Aligned_cols=86  Identities=29%  Similarity=0.644  Sum_probs=69.6

Q ss_pred             CCccccC--CcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCCh
Q psy1773         234 PEDLVCK--GCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRS  311 (359)
Q Consensus       234 ~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~  311 (359)
                      +++|.|+  .|++.|.....|..|++ +|.++++|.|++  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~   75 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRI--CMRNFSRSDHLTTHIR-THTGEKPFACDI--CGRKFARS   75 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTT--TCCEESCHHHHHHHHH-HHHCCCCEECTT--TCCEESSH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCC--CCcccCCHHHHHHHHH-HcCCCCCccCCC--CCchhCCH
Confidence            4678887  58888888888888877 788888888876  8888888888888887 588888888887  88888888


Q ss_pred             HHHHHHHHhhcCCC
Q psy1773         312 EHLQEHMLQHNENK  325 (359)
Q Consensus       312 ~~l~~H~~~h~~~~  325 (359)
                      ..|..|+++|++++
T Consensus        76 ~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           76 DERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHGGGGC--
T ss_pred             HHHHHHHHHhcccC
Confidence            88888888888765

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.4e-18  Score=123.10  Aligned_cols=87  Identities=28%  Similarity=0.634  Sum_probs=61.2

Q ss_pred             cCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC--CCceeccCCCcccc
Q psy1773         261 ESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN--KPKFTCPYQDCLMS  338 (359)
Q Consensus       261 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~~C~~~~C~~~  338 (359)
                      +++++|.|.+  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+++|+++  + +|.|++  |++.
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~-~~~C~~--C~~~   74 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKL-SHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGK-PYICQS--CGKG   74 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHH-HSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCS-SBCCSS--SCCC
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHH-hcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCC-ceECCC--ccch
Confidence            3566777765  7777777777777776 467777777776  777777777777777777765  4 577777  7777


Q ss_pred             ccchhhHHHHHhhhcCC
Q psy1773         339 YVAKSSLYAHLKHVHST  355 (359)
Q Consensus       339 f~~~~~l~~H~~~hh~~  355 (359)
                      |.+...|.+|++..|.+
T Consensus        75 f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           75 FSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             BSSHHHHHHHHHHTSCC
T ss_pred             hCCHHHHHHHHHHhcCC
Confidence            77777777777644443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.5e-18  Score=126.98  Aligned_cols=95  Identities=20%  Similarity=0.357  Sum_probs=67.8

Q ss_pred             hhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCc
Q psy1773         227 QRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGK  306 (359)
Q Consensus       227 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~  306 (359)
                      +++| .++++|.|.+|++.|.....|..|++ +|  .++|.|.+  |++.|.....|..|+.  |.++++|.|++  |++
T Consensus         8 ~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~-~H--~~~~~C~~--C~~~f~~~~~l~~H~~--H~~~~~~~C~~--C~~   77 (107)
T 1wjp_A            8 ASPV-ENKEVYQCRLCNAKLSSLLEQGSHER-LC--RNAAVCPY--CSLRFFSPELKQEHES--KCEYKKLTCLE--CMR   77 (107)
T ss_dssp             CCCC-CCCCCCBCTTTCCBCSSHHHHHHHHH-HH--HHSBCCTT--TCCCBSSHHHHHHHHH--HCSTGGGEEGG--GTE
T ss_pred             Cccc-CCCcCeECCCCCCccCCHHHHHHHHH-HC--CCCccCCC--CCCccCCHHHHHHHHH--cCCCCCccCcc--ccc
Confidence            4455 45577777777777777777777776 56  35777765  7777777777777773  77777777777  777


Q ss_pred             ccCChHHHHHHHH-hhcCCCCceeccC
Q psy1773         307 SFLRSEHLQEHML-QHNENKPKFTCPY  332 (359)
Q Consensus       307 ~f~~~~~l~~H~~-~h~~~~~~~~C~~  332 (359)
                      .|.+...|..|++ +|++++ +|.|..
T Consensus        78 ~f~~~~~L~~H~~~~H~~~~-~~~~~~  103 (107)
T 1wjp_A           78 TFKSSFSIWRHQVEVHNQNN-MAPTSG  103 (107)
T ss_dssp             ECSSHHHHHHHHHHTSCCCC-CCCCCC
T ss_pred             hhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            7777777777776 666666 576653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=2e-18  Score=127.08  Aligned_cols=85  Identities=31%  Similarity=0.604  Sum_probs=43.8

Q ss_pred             ccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccc
Q psy1773         260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSY  339 (359)
Q Consensus       260 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f  339 (359)
                      |+++++|.| .  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++++ +|.|++  |++.|
T Consensus         5 h~~~k~~~C-~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f   75 (110)
T 2csh_A            5 SSGDKLYPC-Q--CGKSFTHKSQRDRHMS-MHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIK-PYECNI--CAKRF   75 (110)
T ss_dssp             CCCCCCEEC-T--TSCEESSHHHHHHHHH-HHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCC-CEECSS--SCCEE
T ss_pred             CCCCCCEec-c--CCCccCCHHHHHHHHH-HcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCC-CeeCCC--Ccchh
Confidence            444555555 3  5555555555555554 344455555554  5555555555555555555544 355555  55555


Q ss_pred             cchhhHHHHHhhhc
Q psy1773         340 VAKSSLYAHLKHVH  353 (359)
Q Consensus       340 ~~~~~l~~H~~~hh  353 (359)
                      .+...|.+|++.||
T Consensus        76 ~~~~~l~~H~~~~~   89 (110)
T 2csh_A           76 MWRDSFHRHVTSCT   89 (110)
T ss_dssp             SCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHcc
Confidence            55555555555544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=3.9e-18  Score=123.23  Aligned_cols=86  Identities=29%  Similarity=0.593  Sum_probs=46.0

Q ss_pred             CccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchh
Q psy1773         264 KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKS  343 (359)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~  343 (359)
                      ++|.|.+++|++.|.....|..|++ .|.++++|.|++..|++.|.+...|..|+++|++++ +|.|++  |++.|.+..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~   89 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK-PFQCGV--CNRSFSRSD   89 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCC-SCBCSS--SCCBCSSHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCC-CeECCC--CcCccCCHH
Confidence            3455543345555555555555555 355555555531125555555555555555555555 455555  555555555


Q ss_pred             hHHHHHhhhc
Q psy1773         344 SLYAHLKHVH  353 (359)
Q Consensus       344 ~l~~H~~~hh  353 (359)
                      .|.+|+++|+
T Consensus        90 ~l~~H~~~H~   99 (100)
T 2ebt_A           90 HLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            5555555554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=9.2e-18  Score=118.43  Aligned_cols=86  Identities=29%  Similarity=0.607  Sum_probs=65.9

Q ss_pred             CCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccch
Q psy1773         263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAK  342 (359)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~  342 (359)
                      .++|.|++++|++.|.+...|..|++ .|.++++|.|++..|++.|.+...|..|+++|++++ +|.|+.  |++.|.+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~   78 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR-PFQCQK--CDRAFSRS   78 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCC-CEECSS--SSCEESSH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCC-CccCCC--CCcccCCH
Confidence            45677765568888888888888877 577777888862238888888888888888888877 688877  88888888


Q ss_pred             hhHHHHHhhh
Q psy1773         343 SSLYAHLKHV  352 (359)
Q Consensus       343 ~~l~~H~~~h  352 (359)
                      +.|..|++.|
T Consensus        79 ~~l~~H~~~H   88 (89)
T 2wbs_A           79 DHLALHMKRH   88 (89)
T ss_dssp             HHHHHHGGGG
T ss_pred             HHHHHHHHhh
Confidence            8888888776

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.4e-17  Score=119.12  Aligned_cols=87  Identities=30%  Similarity=0.631  Sum_probs=72.4

Q ss_pred             CCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCC--cccCCCCCCcCcccC
Q psy1773         232 TNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNM--RMFPCPLVTCGKSFL  309 (359)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~--~~~~C~~~~C~~~f~  309 (359)
                      .++++|.|.+|++.|.+...|..|++ +|.++++|.|++  |++.|.+...|..|++ .|.++  ++|.|+.  |++.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~--C~~~f~   76 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPV--CGLRFKRKDRMSYHVR-SHDGSVGKPYICQS--CGKGFS   76 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSS--SCCEESCHHHHHHHHH-HHCCCCCSSBCCSS--SCCCBS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCC--CCCccCCHHHHHHHHH-HhcCCCCCceECCC--ccchhC
Confidence            35578889999999988888999987 788888899976  9999999999999988 46665  8899988  999999


Q ss_pred             ChHHHHHHHH-hhcCC
Q psy1773         310 RSEHLQEHML-QHNEN  324 (359)
Q Consensus       310 ~~~~l~~H~~-~h~~~  324 (359)
                      +...|..|++ .|.++
T Consensus        77 ~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           77 RPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SHHHHHHHHHHTSCCC
T ss_pred             CHHHHHHHHHHhcCCC
Confidence            9999999986 56554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.7e-18  Score=123.21  Aligned_cols=88  Identities=27%  Similarity=0.500  Sum_probs=80.1

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCcccc
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMS  338 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~  338 (359)
                      +|+++++|.|.+  |++.|.....|..|++. |  .++|.|++  |++.|.....|..|++ |++++ +|.|.+  |++.
T Consensus        10 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~-H--~~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~-~~~C~~--C~~~   78 (107)
T 1wjp_A           10 PVENKEVYQCRL--CNAKLSSLLEQGSHERL-C--RNAAVCPY--CSLRFFSPELKQEHES-KCEYK-KLTCLE--CMRT   78 (107)
T ss_dssp             CCCCCCCCBCTT--TCCBCSSHHHHHHHHHH-H--HHSBCCTT--TCCCBSSHHHHHHHHH-HCSTG-GGEEGG--GTEE
T ss_pred             ccCCCcCeECCC--CCCccCCHHHHHHHHHH-C--CCCccCCC--CCCccCCHHHHHHHHH-cCCCC-CccCcc--ccch
Confidence            689999999986  99999999999999994 7  47999999  9999999999999996 99988 799999  9999


Q ss_pred             ccchhhHHHHHhhhcCCCC
Q psy1773         339 YVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       339 f~~~~~l~~H~~~hh~~~~  357 (359)
                      |.+...|.+|++.+|.+++
T Consensus        79 f~~~~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNN   97 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCC
Confidence            9999999999985665543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.71  E-value=1.8e-17  Score=119.69  Aligned_cols=87  Identities=34%  Similarity=0.741  Sum_probs=77.2

Q ss_pred             CCCccccCC--cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCC
Q psy1773         233 NPEDLVCKG--CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLR  310 (359)
Q Consensus       233 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~  310 (359)
                      ..++|.|.+  |++.|.....|..|++ +|.++++|.|+++.|++.|.+...|..|++ .|.++++|.|+.  |++.|.+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~   87 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGV--CNRSFSR   87 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTSCCSCBCSS--SCCBCSS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCCCCCeECCC--CcCccCC
Confidence            346799996  9999999999999987 899999999964459999999999999998 689999999998  9999999


Q ss_pred             hHHHHHHHHhhcC
Q psy1773         311 SEHLQEHMLQHNE  323 (359)
Q Consensus       311 ~~~l~~H~~~h~~  323 (359)
                      ...|..|+++|++
T Consensus        88 ~~~l~~H~~~H~~  100 (100)
T 2ebt_A           88 SDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999975

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=8.9e-18  Score=107.58  Aligned_cols=57  Identities=28%  Similarity=0.522  Sum_probs=47.1

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ++||.|+.  ||++|...+.|..|+++|++++ ||.|++  ||++|...+.|.+|+++|+++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ek-p~~C~~--C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYR-PRSCPE--CGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCC-CEECTT--TCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCc-CeECCC--CCCCcCCHHHHHHHhCccCCC
Confidence            67888887  8888888888888888888888 688888  888888888888888887765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.9e-17  Score=121.74  Aligned_cols=85  Identities=24%  Similarity=0.552  Sum_probs=77.9

Q ss_pred             CCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCCh
Q psy1773         232 TNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRS  311 (359)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~  311 (359)
                      .++++|.| .|++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|++ .|.++++|.|++  |++.|.+.
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~   78 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGV--CGKKFKMKHHLVGHMK-IHTGIKPYECNI--CAKRFMWR   78 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTT--TSCEESSSHHHHHHHT-TTCCCCCEECSS--SCCEESCH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCC--CCcccCCHHHHHHHHH-HcCCCCCeeCCC--CcchhcCH
Confidence            56789999 89999999999999988 899999999976  9999999999999998 688999999998  99999999


Q ss_pred             HHHHHHHHhhcC
Q psy1773         312 EHLQEHMLQHNE  323 (359)
Q Consensus       312 ~~l~~H~~~h~~  323 (359)
                      ..|..|+++|+.
T Consensus        79 ~~l~~H~~~~~~   90 (110)
T 2csh_A           79 DSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHccc
Confidence            999999999875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=1.5e-17  Score=117.27  Aligned_cols=84  Identities=36%  Similarity=0.776  Sum_probs=63.8

Q ss_pred             CccccCC--cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChH
Q psy1773         235 EDLVCKG--CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSE  312 (359)
Q Consensus       235 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  312 (359)
                      .+|.|.+  |++.|.+...|..|++ +|.++++|.|+++.|++.|.+...|..|++ .|.++++|.|+.  |++.|.+..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~   79 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQK--CDRAFSRSD   79 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHH-HHHCCCCEECSS--SSCEESSHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHH-HcCCCCCccCCC--CCcccCCHH
Confidence            5677777  8888887778888876 677777788853358888888888888876 577777888877  888888888


Q ss_pred             HHHHHHHhhc
Q psy1773         313 HLQEHMLQHN  322 (359)
Q Consensus       313 ~l~~H~~~h~  322 (359)
                      .|..|+++|.
T Consensus        80 ~l~~H~~~H~   89 (89)
T 2wbs_A           80 HLALHMKRHF   89 (89)
T ss_dssp             HHHHHGGGGC
T ss_pred             HHHHHHHhhC
Confidence            8888877763

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=6.3e-17  Score=111.33  Aligned_cols=77  Identities=32%  Similarity=0.722  Sum_probs=53.4

Q ss_pred             cCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCcccccc
Q psy1773         261 ESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYV  340 (359)
Q Consensus       261 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~  340 (359)
                      +++++|.|.++.|++.|.+...|..|++..|.++++|.|+.+.|++.|.+...|..|+++|++++ +|.|++  |+++|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR-DYICEF--SGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSC-CCSCCS--SSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCC-CeeCCC--CCCCCC
Confidence            45566777655677777777777777764477777777764447777777777777777777776 577777  777763

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=3e-17  Score=105.11  Aligned_cols=58  Identities=31%  Similarity=0.705  Sum_probs=38.6

Q ss_pred             CCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      |+||+|..  |++.|...+.|..|++ .|++++||.|+.  ||++|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRR-AHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHH-HHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHH-HhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            56666654  6666666666666666 466666777766  7777777777777777666653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=6.2e-18  Score=118.99  Aligned_cols=83  Identities=22%  Similarity=0.365  Sum_probs=72.8

Q ss_pred             CCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccch
Q psy1773         263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAK  342 (359)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~  342 (359)
                      ++||.|++  |++.|.+...|..|++ .|.+++||.|+.  |++.|.+...|..|+++|++ . +|.|+.  |++.|.+.
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~-~~~c~~--C~~~f~~~   71 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIR-THTGEKPFACDI--CGRKFARSDERKRHRDIQHI-L-PILEDK--VEELLSKN   71 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHH-HHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-H-HHHHHH--HHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHH-HcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-C-cchHHH--HHHHHHHH
Confidence            46889976  9999999999999988 588889999988  99999999999999999885 4 699988  99999999


Q ss_pred             hhHHHHHhhhcC
Q psy1773         343 SSLYAHLKHVHS  354 (359)
Q Consensus       343 ~~l~~H~~~hh~  354 (359)
                      ..|..|++.+|+
T Consensus        72 ~~L~~H~~~~h~   83 (88)
T 1llm_C           72 YHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHH
Confidence            999999998874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=1.9e-16  Score=110.59  Aligned_cols=84  Identities=24%  Similarity=0.505  Sum_probs=47.3

Q ss_pred             ccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCC-ccccccchh
Q psy1773         265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQD-CLMSYVAKS  343 (359)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~-C~~~f~~~~  343 (359)
                      ||.|+++.|++.|.+...|..|++ .|.++++|.|+..+|++.|.+...|..|+++|++    |.|+..+ |++.|.+.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHH
Confidence            355522226666666666666655 3555556666433366666666666666666655    5554333 666666666


Q ss_pred             hHHHHHhhhc
Q psy1773         344 SLYAHLKHVH  353 (359)
Q Consensus       344 ~l~~H~~~hh  353 (359)
                      .|.+|++.||
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            6666666554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=5.1e-17  Score=114.27  Aligned_cols=82  Identities=21%  Similarity=0.387  Sum_probs=63.2

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHH
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHL  314 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l  314 (359)
                      +||.|.+|++.|.....|..|++ +|.+++||.|++  |++.|.+...|..|++.+| + .+|.|+.  |++.|.+...|
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~-~-~~~~c~~--C~~~f~~~~~L   74 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDI--CGRKFARSDERKRHRDIQH-I-LPILEDK--VEELLSKNYHL   74 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTT--TCCEESSHHHHHHHHHHHT-H-HHHHHHH--HHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCC--CCCccCCHHHHHHHHHHhC-C-CcchHHH--HHHHHHHHhhh
Confidence            57888888888888888888876 677888888865  8888888888888887544 2 6788877  88888888888


Q ss_pred             HHHHHhhcC
Q psy1773         315 QEHMLQHNE  323 (359)
Q Consensus       315 ~~H~~~h~~  323 (359)
                      ..|++.+++
T Consensus        75 ~~H~~~~h~   83 (88)
T 1llm_C           75 ENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888876543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=9.5e-16  Score=106.93  Aligned_cols=82  Identities=32%  Similarity=0.560  Sum_probs=50.2

Q ss_pred             cccc--CCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCC-cCcccCChH
Q psy1773         236 DLVC--KGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVT-CGKSFLRSE  312 (359)
Q Consensus       236 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~-C~~~f~~~~  312 (359)
                      ||.|  +.|++.|.+...|..|++ +|.++++|+|++++|++.|.+...|..|++ .|.+   |.|+... |++.|.+..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHS---EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHH-HhCC---CCCCCCCCCCCccCCHH
Confidence            3566  666666666666666655 566666666643336666666666666665 3554   6665322 666666666


Q ss_pred             HHHHHHHhhc
Q psy1773         313 HLQEHMLQHN  322 (359)
Q Consensus       313 ~l~~H~~~h~  322 (359)
                      .|..|+++|+
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            6666666654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=4.2e-16  Score=109.04  Aligned_cols=79  Identities=24%  Similarity=0.351  Sum_probs=53.0

Q ss_pred             HHHHHHHccCCCccccccCCcCccccChHhhhccccccccCC---cccCCCCCCcCcccCChHHHHHHHHhhcCCCCcee
Q psy1773         253 REHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNM---RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFT  329 (359)
Q Consensus       253 ~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~  329 (359)
                      ..|++ +|+++++|.|.+  |++.|.....|..|++.+|...   ++|.|+.  |++.|.....|..|+++|++++ ++.
T Consensus         4 ~~H~~-~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~-~~~   77 (86)
T 1x6h_A            4 GSSGR-THTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPD-GVE   77 (86)
T ss_dssp             TCCST-TCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCC-SCC
T ss_pred             ccccc-eecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCC-Ccc
Confidence            34555 666667777755  7777777777777766444433   6677776  7777777777777777777777 577


Q ss_pred             ccCCCccccc
Q psy1773         330 CPYQDCLMSY  339 (359)
Q Consensus       330 C~~~~C~~~f  339 (359)
                      |..  |+.+|
T Consensus        78 ~~~--~~~~~   85 (86)
T 1x6h_A           78 GEN--SGPSS   85 (86)
T ss_dssp             CCC--CCCCC
T ss_pred             cCC--CCCCC
Confidence            776  76654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.3e-15  Score=103.42  Aligned_cols=71  Identities=32%  Similarity=0.531  Sum_probs=33.7

Q ss_pred             CccccCC--cCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCccc
Q psy1773         235 EDLVCKG--CGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSF  308 (359)
Q Consensus       235 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f  308 (359)
                      ++|.|..  |++.|.+...|..|++.+|.++++|.|+++.|++.|.+...|..|++ .|.+++||.|++  |+++|
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~--C~k~F   78 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEF--SGPSS   78 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCCS--SSCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCCCCCeeCCC--CCCCC
Confidence            4444443  55555555555555443344444555532225555555555555544 344445555544  55444

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=6.7e-16  Score=110.71  Aligned_cols=70  Identities=19%  Similarity=0.314  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHccCCCccccccCCcCcccc-ChHhhhccccccccC-CcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         250 CRLREHYKAVHESTKNFKCTYDGCKLLFS-TKSALKRHNKSKHLN-MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       250 ~~l~~H~~~~H~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~~H~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      ..+..|++ +|.++++|.|.+  |++.|. ....|..|++ .|.+ +++|.|.+  |++.|.+...|..|+++|++++
T Consensus        10 ~~~~~h~~-~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~-~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           10 GPEEQWQR-AIHERGEAVCPT--CNVVTRKTLVGLKKHME-VCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CSCSHHHH-TTTTTSCCCCTT--TCCCCSSCSHHHHHHHH-HHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CcHHHHHH-HhccCCCcCCCC--CCCChhhhHHHHHHHHH-HHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            33444443 454555555543  555555 4555555544 2333 44555544  5555555555555555555444

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=2.7e-16  Score=119.07  Aligned_cols=69  Identities=26%  Similarity=0.452  Sum_probs=46.9

Q ss_pred             cChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         278 STKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       278 ~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      .....|..|++  |++++||.|+.  |++.|.....|..|+++|  ++ ||.|++  |++.|.+.+.|.+|++.||++
T Consensus        58 ~~~~~l~~h~~--h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~-~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLLA--SKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EH-TKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTHHHHHHHHH--HHHHCSEECTT--TCCEESSHHHHHHHHHHT--CC-CCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHH--hCCCCCeECCC--CCcccCCHhHHHHHHHHC--CC-CCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            34555555553  66677777776  777777777777777776  45 577777  777777777777777777765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=3.3e-16  Score=118.59  Aligned_cols=112  Identities=21%  Similarity=0.321  Sum_probs=85.9

Q ss_pred             CCCccccCCCCCccccChHHHHHHhhhhcCCCCccccCCcCccCC------ChHHHHHHHHHHccCCCccccccCCcCcc
Q psy1773         203 SAPYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFK------VPCRLREHYKAVHESTKNFKCTYDGCKLL  276 (359)
Q Consensus       203 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~------~~~~l~~H~~~~H~~~~~~~C~~~~C~~~  276 (359)
                      .++|.|.+..+...|.....+..|....  ..+++.|++|.+.|.      ....|..|+  .|++++||.|.+  |++.
T Consensus        10 ~k~~~~~~k~~~~~~s~ee~~~~~~l~~--~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~--C~k~   83 (129)
T 2wbt_A           10 SKKYLSNHKGIFIHVTLEELKRYHQLTP--EQKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPL--CLMP   83 (129)
T ss_dssp             CCGGGGCSSCEEEECCHHHHHHHTTSCH--HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTT--TCCE
T ss_pred             ccccccccCCeeeeecHHhhhccccCCh--hhCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCC--CCcc
Confidence            6788887644444454433333333322  235677888776665      667777775  588899999976  9999


Q ss_pred             ccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         277 FSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       277 f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      |.....|..|++ .|  ++||.|+.  |++.|.+...|..|+++|++.-
T Consensus        84 f~~~~~l~~H~~-~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           84 FSSSVSLKQHIR-YT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             ESSHHHHHHHHH-HT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCCC
T ss_pred             cCCHhHHHHHHH-HC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCcc
Confidence            999999999998 57  88999999  9999999999999999999863

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4e-15  Score=101.58  Aligned_cols=71  Identities=31%  Similarity=0.569  Sum_probs=62.4

Q ss_pred             hhhccccccccCCcccCCCCCCcCcccCChHHHHHHHH-hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         282 ALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       282 ~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      +|..|++ .|++++||.|++  |++.|.....|..|++ .|.++..+|.|++  |++.|.+...|.+|++.+|+...
T Consensus         2 s~~~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            2 SSGSSGR-THSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCC-CCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCCcccc-ccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCC
Confidence            4678998 699999999998  9999999999999997 5666523799999  99999999999999999998764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.1e-14  Score=98.05  Aligned_cols=65  Identities=28%  Similarity=0.457  Sum_probs=56.8

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      +.+ .|+++++|.|++  |++.|.....|..|+++|++++ +|.|++  |++.|.+...|.+|++.|+++.
T Consensus         5 ~~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSG-IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEK-PYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCC-TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSC-CEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCc-ccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCC-CeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            344 588899999998  9999999999999999999888 699988  9999999999999999988764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=4.1e-15  Score=106.29  Aligned_cols=67  Identities=21%  Similarity=0.417  Sum_probs=41.9

Q ss_pred             cCCCccccccCCcCccccChHhhhccccccc---cCCcccCCCCCCcCcccCChHHHHHH-HHhhcCCCCceeccC
Q psy1773         261 ESTKNFKCTYDGCKLLFSTKSALKRHNKSKH---LNMRMFPCPLVTCGKSFLRSEHLQEH-MLQHNENKPKFTCPY  332 (359)
Q Consensus       261 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~~C~~  332 (359)
                      +|++||.|..  |++.|...+.|..|++..|   ++++||.|+.  ||+.|.....|..| +++|++++ ||.|.+
T Consensus        14 ~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgek-py~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEE-NFKLTM   84 (102)
T ss_dssp             CCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCC-CEEEEE
T ss_pred             CCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCC-CeeCCc
Confidence            3556666654  6666666666666665335   4456666666  66666666666666 56666666 466665

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=8.2e-15  Score=100.03  Aligned_cols=59  Identities=29%  Similarity=0.577  Sum_probs=26.1

Q ss_pred             cCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         292 LNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       292 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      .++++|.|++  |++.|.....|..|+++|++++ +|.|++  |++.|.....|.+|++.|+++
T Consensus        14 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~   72 (77)
T 2cot_A           14 RERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEK-PYKCDE--CGKAFIQRSHLIGHHRVHTGS   72 (77)
T ss_dssp             CCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSC-SEECSS--SCCEESSHHHHHHHGGGSCCC
T ss_pred             CCCCCEECCC--CCcccCCHHHHHHHHHHcCCCc-CeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence            3344444444  4444444444444444444444 344444  444444444444444444433

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=6.9e-15  Score=102.77  Aligned_cols=80  Identities=25%  Similarity=0.434  Sum_probs=55.2

Q ss_pred             HHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCC---CccccccCCcCccccChHhhhccccccccCCcccCC
Q psy1773         223 LKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHEST---KNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPC  299 (359)
Q Consensus       223 l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  299 (359)
                      |.+|+++| .++++|.|.+|++.|.....|..|++..|...   ++|.|.+  |++.|.....|..|++ .|.+++++.|
T Consensus         3 ~~~H~~~H-~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~~   78 (86)
T 1x6h_A            3 SGSSGRTH-TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHAD-NCAGPDGVEG   78 (86)
T ss_dssp             TTCCSTTC-CCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHH-HCCCCCSCCC
T ss_pred             ccccccee-cCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHH-HccCCCCccc
Confidence            45577777 45577777777777777777777766334332   6777765  7777777777777777 4777777777


Q ss_pred             CCCCcCccc
Q psy1773         300 PLVTCGKSF  308 (359)
Q Consensus       300 ~~~~C~~~f  308 (359)
                      ..  |+..|
T Consensus        79 ~~--~~~~~   85 (86)
T 1x6h_A           79 EN--SGPSS   85 (86)
T ss_dssp             CC--CCCCC
T ss_pred             CC--CCCCC
Confidence            76  77654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.4e-14  Score=96.91  Aligned_cols=61  Identities=25%  Similarity=0.385  Sum_probs=42.8

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      |+++++|.|+.  |++.|.+...|..|+++|++++ +|.|++  |++.|.+...|.+|++.||+++
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDR-PFKCNY--CSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSC-SEECSS--SSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCC-CEeCCC--CCCccCCHHHHHHHHHHHhCCC
Confidence            56666777776  7777777777777777777666 577776  7777777777777777777654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=1.4e-14  Score=99.75  Aligned_cols=61  Identities=23%  Similarity=0.580  Sum_probs=55.3

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      .+...++|.|++  |++.|.+...|..|+++|++++ ||.|++  |+++|.++..|.+|++..|.+
T Consensus        22 ~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k-~~~C~~--C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           22 LSASAECHLCPV--CGESFASKGAQERHLRLLHAAQ-VFPCKY--CPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSS-SEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCC-ccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence            467788999999  9999999999999999999999 799999  999999999999998765544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=1.4e-14  Score=92.54  Aligned_cols=57  Identities=30%  Similarity=0.550  Sum_probs=49.4

Q ss_pred             CCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         293 NMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       293 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      +++||.|+.  |++.|.+...|..|+++|++++ +|.|+.  |++.|.+...|.+|++.||+
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEK-PYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCC-CEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCC-CcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            467899998  9999999999999999999998 699999  99999999999999999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.6e-14  Score=95.39  Aligned_cols=60  Identities=22%  Similarity=0.650  Sum_probs=53.7

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHh-h-cCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQ-H-NENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      .|++++||.|+.  |++.|.+...|..|+++ | .+++ +|.|+.  |++.|.+.+.|.+|++.||+
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~-~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVK-VYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCC-CEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCc-CeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            688999999998  99999999999999998 5 4666 799998  99999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.49  E-value=3.7e-14  Score=90.57  Aligned_cols=57  Identities=26%  Similarity=0.636  Sum_probs=51.7

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      ||.|+.  |++.|.+...|..|+++|++++ +|.|+.  |++.|.+...|.+|++.|+++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVR-PYHCTY--CNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCC-CEECSS--SSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCC-CccCCC--CCchhcCHHHHHHHHHHhcccCC
Confidence            688988  9999999999999999999988 699998  99999999999999999988764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.4e-14  Score=103.43  Aligned_cols=66  Identities=23%  Similarity=0.281  Sum_probs=36.2

Q ss_pred             CCCccccCCcCccCCChHHHHHHHHHHc---cCCCccccccCCcCccccChHhhhcc-ccccccCCcccCCCC
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREHYKAVH---ESTKNFKCTYDGCKLLFSTKSALKRH-NKSKHLNMRMFPCPL  301 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~~H~~~~~~~C~~  301 (359)
                      +++||.|..|++.|...+.|..|++.+|   ++++||.|..  |++.|...+.|..| ++ .|++++||.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r-~Htgekpy~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLK-YHPGEENFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHH-TSTTCCCEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHH-hcCCCCCeeCCc
Confidence            3455555555555555555555554345   3455555543  55555555555555 44 455555555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=5.8e-15  Score=105.79  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=68.3

Q ss_pred             CccccChHhhhccccccccCCcccCCCCCCcCcccC-ChHHHHHHHHhhcC-CCCceeccCCCccccccchhhHHHHHhh
Q psy1773         274 KLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFL-RSEHLQEHMLQHNE-NKPKFTCPYQDCLMSYVAKSSLYAHLKH  351 (359)
Q Consensus       274 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~  351 (359)
                      ...+.....+..|++ .|.++++|.|++  |++.|. ....|..|+++|++ ++ +|.|.+  |++.|.++..|.+|++.
T Consensus         3 s~s~~~~~~~~~h~~-~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~-~~~C~~--C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQR-AIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQD-ALKCQH--CRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             CCCCCCCCSCSHHHH-TTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHH-HHSCSS--SCCCCSCHHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHH-HhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCC-CEECCC--CCCccCCHHHHHHHHHH
Confidence            345666777888888 699999999998  999999 99999999999998 77 799998  99999999999999999


Q ss_pred             hcCCCCC
Q psy1773         352 VHSTNKI  358 (359)
Q Consensus       352 hh~~~~~  358 (359)
                      ||+++.+
T Consensus        77 h~~~kp~   83 (98)
T 2gqj_A           77 EHSAKPS   83 (98)
T ss_dssp             HSCSCSS
T ss_pred             HcCCCCC
Confidence            9987643

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=5.3e-14  Score=95.13  Aligned_cols=62  Identities=19%  Similarity=0.379  Sum_probs=47.4

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .+.++++|.|+.  |++.|.+...|..|+++|++++ +|.|.+  |++.|.+...|.+|++.|++++
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~-~~~C~~--C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEK-PYRCNI--CGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCC-SEECTT--TCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCC-CEECCC--CCchhCCHHHHHHHHHhcCCCC
Confidence            356677788877  8888888888888887777777 588877  8888888888888877777664

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.4e-14  Score=95.80  Aligned_cols=71  Identities=24%  Similarity=0.552  Sum_probs=59.3

Q ss_pred             hHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhc
Q psy1773         280 KSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       280 ~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      +..|..|+...|+++++|.|++..|++.|.....|..|+++|++++ +|.|++  |++.|.+...|.+|++.|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            3 PHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQK-PFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             -----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCC-CEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CCCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCC-CeECCC--CCchhCCHHHHHHHHHhcC
Confidence            3457778888899999999973239999999999999999999998 699999  9999999999999998874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=3.3e-14  Score=96.18  Aligned_cols=64  Identities=30%  Similarity=0.632  Sum_probs=50.1

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCce
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF  328 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  328 (359)
                      .+.++++|+|..  |++.|.+...|..|++ .|.++++|.|.+  |++.|.+...|..|+++|++++ ||
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-p~   74 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKT-VHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEK-PY   74 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHH-HHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSC-CC
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHH-HcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCC-CC
Confidence            456777888865  8888888888888887 577788888887  8888888888888888888877 45

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.2e-13  Score=94.08  Aligned_cols=66  Identities=27%  Similarity=0.570  Sum_probs=62.1

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      .+.++++|.|.+  |++.|.....|..|++ .|.++++|.|++  |++.|.....|..|+++|++++ ||.|
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~-p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRR-THTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSG-PSSG   77 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHT-TTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCC-CCCC
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHH-HcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCC-CCCC
Confidence            567889999986  9999999999999999 699999999999  9999999999999999999999 6987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.8e-14  Score=99.78  Aligned_cols=73  Identities=23%  Similarity=0.415  Sum_probs=50.4

Q ss_pred             ccCCChHHHHHHHHHHccCCCccccccCCcCccc-cChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHH-HHhh
Q psy1773         244 KQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLF-STKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEH-MLQH  321 (359)
Q Consensus       244 ~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h  321 (359)
                      .+|.....|..|.+ .|.++++|.|..  |++.| .+...|..|++ .| ++++|.|.+  |++.|.....|..| +++|
T Consensus        14 ~~~~~~~~~~~~~~-~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           14 PVYAAGSLEEQWYL-EIVDKGSVSCPT--CQAVGRKTIEGLKKHME-NC-KQEMFTCHH--CGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CSSCTTCHHHHHHH-HHHHTSCEECTT--TCSCEESSHHHHHHHHH-HH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHH-HhcCCCCcCCCC--CCCCcccCHHHHHHHHH-HH-CCCCeECCC--CCCeeCCHHHHHHHhHHhc
Confidence            45566666667755 566677777754  77777 67777777776 46 777777776  77777777777777 6666


Q ss_pred             cC
Q psy1773         322 NE  323 (359)
Q Consensus       322 ~~  323 (359)
                      ++
T Consensus        87 ~~   88 (96)
T 2ctd_A           87 NS   88 (96)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=2e-14  Score=98.03  Aligned_cols=62  Identities=26%  Similarity=0.548  Sum_probs=33.0

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCC-cccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNM-RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +|++++||.|.+  |++.|.....|..|++..|.+. ++|.|+.  |++.|.+...|..|+++|++.
T Consensus         9 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            9 THSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             ccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence            455555555543  5555555555555554334442 5555555  555555555555555554443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=6e-14  Score=95.93  Aligned_cols=62  Identities=23%  Similarity=0.424  Sum_probs=46.9

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcC---CCCceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE---NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      |+++++|.|++  |++.|.....|..|+++|++   ++ +|.|.+  |++.|.....|.+|++.+|.+..
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~-~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAAL-RFPCEF--CGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTC-CEECTT--TCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCc-ccCCCC--CCchhCCHHHHHHHHHHhCCCCC
Confidence            67777888877  88888888888888887775   55 688877  88888888888888777666543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=4.5e-14  Score=100.36  Aligned_cols=74  Identities=19%  Similarity=0.306  Sum_probs=66.8

Q ss_pred             CccccChHhhhccccccccCCcccCCCCCCcCccc-CChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHH-Hhh
Q psy1773         274 KLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSF-LRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH-LKH  351 (359)
Q Consensus       274 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~  351 (359)
                      ...|.....|..|++ .|.++++|.|+.  |++.| .+...|..|+++| +++ +|.|.+  |++.|..+..|.+| ++.
T Consensus        13 ~~~~~~~~~~~~~~~-~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k-~~~C~~--Cgk~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYL-EIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQE-MFTCHH--CGKQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             CCSSCTTCHHHHHHH-HHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCC-CCCCSS--SCCCCSSHHHHHHHHHHH
T ss_pred             CCCCCCchHHHHHHH-HhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCC-CeECCC--CCCeeCCHHHHHHHhHHh
Confidence            456778888999988 588999999999  99999 9999999999999 888 799999  99999999999999 776


Q ss_pred             hcC
Q psy1773         352 VHS  354 (359)
Q Consensus       352 hh~  354 (359)
                      |.+
T Consensus        86 H~~   88 (96)
T 2ctd_A           86 HNS   88 (96)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=7.3e-14  Score=93.32  Aligned_cols=63  Identities=27%  Similarity=0.451  Sum_probs=55.9

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP  326 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  326 (359)
                      .|+++++|+|.+  |++.|.....|..|++ .|.++++|.|++  |++.|.....|..|+++|+++++
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHER-IHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHG-GGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCC
Confidence            477889999976  9999999999999998 588999999998  99999999999999999998874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=3.1e-14  Score=93.98  Aligned_cols=62  Identities=26%  Similarity=0.674  Sum_probs=50.9

Q ss_pred             HHccCCCccccccCCcCccccChHhhhccccccc-cCCcccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         258 AVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKH-LNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       258 ~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      .+|++++||.|+.  |++.|.+...|..|++.+| ++++||.|+.  |++.|.+...|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            3678888888865  8888888888888887546 6888888888  88888888888888888876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=7.4e-14  Score=93.86  Aligned_cols=62  Identities=29%  Similarity=0.576  Sum_probs=52.9

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +|+++++|+|++  |++.|.....|..|++ .|.++++|.|++  |++.|.+...|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVE--CGKAFSRSSILVQHQR-VHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHH-GGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCC--CCCccCCHHHHHHHHH-hcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            678888888876  8888888888888888 588888888888  9999988888999988888765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=94.76  Aligned_cols=57  Identities=26%  Similarity=0.547  Sum_probs=27.6

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCC
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNM  294 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~  294 (359)
                      ++|.|++|++.|.....|..|++ +|++++||.|.+  |++.|.....|..|++..|+++
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            44455555555555555555544 444555555543  5555555555555543344443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.8e-13  Score=87.44  Aligned_cols=56  Identities=32%  Similarity=0.743  Sum_probs=48.1

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      +||.|+.  |++.|.+...|..|+++|++++ +|.|+.  |++.|.+...|.+|++..|.+
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK-PYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC-SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCC-CccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            4789988  9999999999999999999888 699988  999999999999997655544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3e-14  Score=96.10  Aligned_cols=68  Identities=28%  Similarity=0.610  Sum_probs=44.7

Q ss_pred             HHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         252 LREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       252 l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      |..|++.+|.++++|.|+++.|++.|.....|..|++ .|.++++|.|+.  |++.|.+...|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            4444455666677777753347777777777777766 466777777776  7777777777777777663

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.37  E-value=2e-13  Score=87.12  Aligned_cols=55  Identities=22%  Similarity=0.550  Sum_probs=35.7

Q ss_pred             CCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         263 TKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      +++|.|++  |++.|.+...|..|++ .|.+++||.|+.  |++.|.....|..|+++|+
T Consensus         2 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSY--CGKFFRSNYYLNIHLR-THTGEKPYKCEF--CEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTT--TCCBCSCHHHHHHHHH-HHHCCCCEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCC--CcchhCChHHHHHHHH-HcCCCCCcCCCC--CcchhCCHHHHHHHHHHhc
Confidence            45666754  7777777777777766 466666777766  7777777777777776665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.34  E-value=6e-13  Score=84.86  Aligned_cols=56  Identities=29%  Similarity=0.605  Sum_probs=37.1

Q ss_pred             ccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      ||.|+.  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+++|++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIR-THTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHH-HTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHH-hcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            466654  6666666666666666 466666667766  7777777777777776666654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=4.3e-15  Score=100.31  Aligned_cols=67  Identities=21%  Similarity=0.339  Sum_probs=31.7

Q ss_pred             HHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         252 LREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       252 l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      |..|++ +|.++++|.|.+  |++.|.+...|..        +++|.|+.  |++.|.+...|..|+++|++++ +|.|+
T Consensus         6 l~~H~~-~h~~~~~~~C~~--C~k~f~~~~~l~~--------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~-~~~C~   71 (73)
T 2ctu_A            6 SGKRQK-IHLGDRSQKCSK--CGIIFIRRSTLSR--------RKTPMCEK--CRKDSCQEAALNKDEGNESGKK-TSGPS   71 (73)
T ss_dssp             CCCCCC-CCCCCSEEECSS--SCCEEECCCCCCC--------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCC-CSSCC
T ss_pred             HHHHHH-HhCCCCCeeCCc--ccchhCCHHHhCc--------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCC-CCCCC
Confidence            333433 444444555543  5555544444433        34455544  5555555555555555555444 35554


Q ss_pred             C
Q psy1773         332 Y  332 (359)
Q Consensus       332 ~  332 (359)
                      +
T Consensus        72 ~   72 (73)
T 2ctu_A           72 S   72 (73)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.3e-12  Score=82.99  Aligned_cols=43  Identities=37%  Similarity=0.807  Sum_probs=19.7

Q ss_pred             cCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHH
Q psy1773         273 CKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       273 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+
T Consensus         8 C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            8 CTRAFARQEHLKRHYR-SHTNEKPYPCGL--CNRAFTRRDLLIRHA   50 (60)
T ss_dssp             TCCCBSCHHHHHHHHH-TTTSSCSEECTT--TCCEESSHHHHHHHH
T ss_pred             CccccCCHHHHHHHHH-HhCCCCCccCCC--CCCccCCHHHHHHHH
Confidence            4444444444444444 244444444444  444444444444443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=4.1e-14  Score=95.42  Aligned_cols=71  Identities=18%  Similarity=0.257  Sum_probs=62.0

Q ss_pred             hHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCC
Q psy1773         220 MASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPC  299 (359)
Q Consensus       220 ~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  299 (359)
                      ...|..|+++| .++++|.|.+|++.|.....|..        +++|.|+.  |++.|.....|..|++ .|+++++|.|
T Consensus         3 ~~~l~~H~~~h-~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~--C~~~f~~~~~l~~H~~-~H~~~~~~~C   70 (73)
T 2ctu_A            3 SGSSGKRQKIH-LGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEK--CRKDSCQEAALNKDEG-NESGKKTSGP   70 (73)
T ss_dssp             CCSCCCCCCCC-CCCSEEECSSSCCEEECCCCCCC--------SSSCCCHH--HHHTCSCCCSSCCCSS-CCCCCCCSSC
T ss_pred             chhHHHHHHHh-CCCCCeeCCcccchhCCHHHhCc--------CCCCCCCC--CChhhcCHHHHHHHHH-hhcCCCCCCC
Confidence            44677888888 56689999999999998887765        78999987  9999999999999998 6999999999


Q ss_pred             CCCCc
Q psy1773         300 PLVTC  304 (359)
Q Consensus       300 ~~~~C  304 (359)
                      ++  |
T Consensus        71 ~~--C   73 (73)
T 2ctu_A           71 SS--G   73 (73)
T ss_dssp             CC--C
T ss_pred             CC--C
Confidence            87  7

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.5e-12  Score=88.85  Aligned_cols=56  Identities=27%  Similarity=0.672  Sum_probs=34.4

Q ss_pred             ccCCCccccccCCcCccccChHhhhccccccccC---CcccCCCCCCcCcccCChHHHHHHHHh
Q psy1773         260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLN---MRMFPCPLVTCGKSFLRSEHLQEHMLQ  320 (359)
Q Consensus       260 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~  320 (359)
                      |+++++|+|.+  |++.|.....|..|++ .|.+   +++|.|++  |++.|.....|..|++.
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQR-KHAETVAALRFPCEF--CGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHH-HHHHHTTTCCEECTT--TCCEESSHHHHHHHHHH
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHH-HhhccCCCcccCCCC--CCchhCCHHHHHHHHHH
Confidence            55666666654  6666666666666665 3443   56666666  66666666666666643

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.9e-12  Score=84.27  Aligned_cols=61  Identities=31%  Similarity=0.545  Sum_probs=52.2

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc-CCCccccccchhhHHHHHhhhcCCCCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP-YQDCLMSYVAKSSLYAHLKHVHSTNKI  358 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~hh~~~~~  358 (359)
                      ..+.+||.|+.  |++.|. ...|..|+++ ++++ ||.|+ .  |+++|..++.|.+|++.|.+...|
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~-p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRL-PVACPNQ--CGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSS-EEECTTC--CSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-cCCc-CccCCcc--cCcccccHHHHHHHHHhhcccCcC
Confidence            45678899998  999999 9999999998 8888 79998 8  999999999999999988766543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=4.6e-12  Score=84.92  Aligned_cols=62  Identities=26%  Similarity=0.600  Sum_probs=52.8

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhh
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      .+...++|.|...+|++.|.....|..|+++|++++ +|.|.+.+|++.|.....|.+|++.|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~-~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK-PFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSC-SEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCC-CccCCCCCCCcccCCHHHHHhHhhcC
Confidence            466778899976669999999999999999999988 69995444999999999999998765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=5.3e-12  Score=89.70  Aligned_cols=70  Identities=24%  Similarity=0.308  Sum_probs=44.8

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHH
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQ  315 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~  315 (359)
                      .+.|..|++.|.....|..|++..|.++++..+..  |                     .+|.|+.  |++.|.....|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~--c---------------------~~~~C~~--C~k~f~~~~~L~   79 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV--C---------------------YWEECPR--EGKSFKAKYKLV   79 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCC--C---------------------CCTTCSS--TTCCCSSHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccc--e---------------------eccCCCC--CCcccCCHHHHH
Confidence            35566666666666666666552265555432221  2                     1277877  888888888888


Q ss_pred             HHHHhhcCCCCceecc
Q psy1773         316 EHMLQHNENKPKFTCP  331 (359)
Q Consensus       316 ~H~~~h~~~~~~~~C~  331 (359)
                      .|+++|++++ ||.|+
T Consensus        80 ~H~~~H~~~k-~~~C~   94 (95)
T 2ej4_A           80 NHIRVHTGEK-SGPSS   94 (95)
T ss_dssp             HHHHHHHTCC-CCSSC
T ss_pred             HHHHhcCCCC-CCCCC
Confidence            8888888877 58775

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.20  E-value=1.5e-11  Score=74.35  Aligned_cols=45  Identities=22%  Similarity=0.363  Sum_probs=41.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      +|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2emk_A            2 SSGS-SGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCC-CSSCCC--C
T ss_pred             CCCC-ccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5888 699999999998  9999999999999999999999 799988  7

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=1.7e-11  Score=87.09  Aligned_cols=63  Identities=24%  Similarity=0.359  Sum_probs=54.2

Q ss_pred             CCccccCCCCCccccChHHHHHHhhhhcCCCCc--------cccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         204 APYMCDYKGCGKSFYLMASLKSHQRVHVTNPED--------LVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       204 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      ..|.|..  |++.|.....|..|+++++.+.++        |.|.+|++.|.....|..|++ +|++++||.|.
T Consensus        24 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHTCCCCSSC
T ss_pred             CCCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            3467876  999999999999999983366566        899999999999999999988 89999999884

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=74.39  Aligned_cols=45  Identities=22%  Similarity=0.332  Sum_probs=40.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2ytn_A            2 SSGS-SGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCC-CCSCCC--C
T ss_pred             CCCc-CCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCC-CCCCCC--C
Confidence            5777 699999999998  9999999999999999999998 799987  7

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2e-11  Score=73.86  Aligned_cols=45  Identities=24%  Similarity=0.411  Sum_probs=41.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|++  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2eoq_A            2 SSGS-SGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCC-SSSCCC--C
T ss_pred             CCCC-CCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 799988  7

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.8e-11  Score=74.07  Aligned_cols=45  Identities=24%  Similarity=0.364  Sum_probs=41.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2eq4_A            2 SSGS-SGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSS-CCCCCC--C
T ss_pred             CCcc-cCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCC-CCCCCC--C
Confidence            5888 699999999998  9999999999999999999998 799988  7

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=74.19  Aligned_cols=45  Identities=16%  Similarity=0.223  Sum_probs=40.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2em0_A            2 SSGS-SGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSS-CSCSSC--C
T ss_pred             CCcC-ccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCC-CcCCCC--C
Confidence            5787 699999999998  9999999999999999999998 699987  7

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.2e-11  Score=73.63  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=41.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      +|++ .|++++||.|+.  |++.|.+...|..|+++|++++ +|.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2eov_A            2 SSGS-SGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGER-HSGPSS--G   46 (46)
T ss_dssp             CCCC-CCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCS-SCCSCC--C
T ss_pred             CCCC-CCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCC-CCCCCC--C
Confidence            5888 699999999998  9999999999999999999998 799988  7

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-11  Score=73.97  Aligned_cols=45  Identities=20%  Similarity=0.211  Sum_probs=41.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2eop_A            2 SSGS-SGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGEN-PSGPSS--G   46 (46)
T ss_dssp             CCCC-SCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSC-CSCCCC--C
T ss_pred             CCcc-ccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 799987  7

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=1.9e-11  Score=73.91  Aligned_cols=45  Identities=24%  Similarity=0.316  Sum_probs=41.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2ely_A            2 SSGS-SGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCS-SCSCCC--C
T ss_pred             CCCC-CCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            4787 699999999998  9999999999999999999998 799988  7

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=74.22  Aligned_cols=45  Identities=20%  Similarity=0.341  Sum_probs=41.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|++  |++.|.....|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2eml_A            2 SSGS-SGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCC-CSCSSC--C
T ss_pred             CccC-CcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 699987  7

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=74.23  Aligned_cols=44  Identities=20%  Similarity=0.315  Sum_probs=40.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ytj_A            2 SSGS-SGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQK-PSGPSS   45 (46)
T ss_dssp             CSSC-TTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCC-CSSCSC
T ss_pred             Cccc-CCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5888 699999999998  9999999999999999999998 699987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=74.66  Aligned_cols=45  Identities=29%  Similarity=0.409  Sum_probs=41.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+.+.|..|+++|++++ +|.|+.  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2eoo_A            2 SSGS-SGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREK-SSGPSS--G   46 (46)
T ss_dssp             CCCC-CCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTT-SSCCSC--C
T ss_pred             CCCC-CCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCC-CCCCCC--C
Confidence            6888 699999999998  9999999999999999999998 799987  7

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=74.15  Aligned_cols=45  Identities=22%  Similarity=0.330  Sum_probs=40.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|...+.|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2eoe_A            2 SSGS-SGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVK-PSGPSS--G   46 (46)
T ss_dssp             CCSS-CCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCC-SCSSCC--C
T ss_pred             CCCC-CCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5777 699999999998  9999999999999999999998 799988  7

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.2e-11  Score=73.64  Aligned_cols=45  Identities=20%  Similarity=0.323  Sum_probs=41.2

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2ytr_A            2 SSGS-SGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CSSC-CCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCS-CCCSCC--C
T ss_pred             CCCc-CCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 799988  7

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=74.13  Aligned_cols=45  Identities=22%  Similarity=0.295  Sum_probs=41.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2emy_A            2 SSGS-SGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSC-CSCSSC--C
T ss_pred             CCCC-CCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 799988  7

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.7e-11  Score=74.11  Aligned_cols=45  Identities=29%  Similarity=0.384  Sum_probs=41.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2emm_A            2 SSGS-SGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCS-CSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCC-TTSSSC--C
T ss_pred             CCcC-CcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 799988  7

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=74.08  Aligned_cols=45  Identities=22%  Similarity=0.348  Sum_probs=41.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--c   46 (46)
T 2ytk_A            2 SSGS-SGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSS-CSSCCC--C
T ss_pred             CCcc-cCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 799988  7

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.5e-11  Score=73.42  Aligned_cols=45  Identities=22%  Similarity=0.264  Sum_probs=40.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2epz_A            2 SSGS-SGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCS-SCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCC-CCSSCC--C
T ss_pred             CCCC-CcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999999998 699987  7

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.6e-11  Score=73.30  Aligned_cols=45  Identities=22%  Similarity=0.303  Sum_probs=40.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2ytq_A            2 SSGS-SGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEK-PSGPSS--G   46 (46)
T ss_dssp             CCSS-CSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSC-SSCCCC--C
T ss_pred             CCCc-CcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999999998 699987  7

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.6e-11  Score=74.24  Aligned_cols=45  Identities=20%  Similarity=0.307  Sum_probs=41.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2emp_A            2 SSGS-SGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCS-CSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCS-CCSCCC--C
T ss_pred             Cccc-ccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 799988  7

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=74.00  Aligned_cols=44  Identities=23%  Similarity=0.413  Sum_probs=40.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ep2_A            2 SSGS-SGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEK-PSGPSS   45 (46)
T ss_dssp             CSSS-CSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCC-SCCSCC
T ss_pred             CCCC-CCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 799987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.16  E-value=1.8e-11  Score=74.02  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=40.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ema_A            2 SSGS-SGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEK-PSGPSS   45 (46)
T ss_dssp             CSCS-SCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCC-CCSSSC
T ss_pred             CCcc-CCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCC-CCCCCC
Confidence            5777 699999999998  9999999999999999999998 699987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.9e-11  Score=73.11  Aligned_cols=44  Identities=23%  Similarity=0.264  Sum_probs=39.7

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      |++ .|++++||.|+.  |++.|.+...|..|+++|++++ +|.|++  |
T Consensus         1 H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   44 (44)
T 2emx_A            1 GSS-GSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEK-PSGPSS--G   44 (44)
T ss_dssp             CCC-CCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSC-SCSCCC--C
T ss_pred             CCC-CcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            666 689999999998  9999999999999999999998 699987  7

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.6e-11  Score=73.34  Aligned_cols=45  Identities=20%  Similarity=0.238  Sum_probs=40.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~h~~-~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2elz_A            2 SSGS-SGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEK-TSGPSS--G   46 (46)
T ss_dssp             CCCS-CCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCC-CCCSCC--C
T ss_pred             CCCC-CCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999999998 699987  7

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.6e-11  Score=74.24  Aligned_cols=44  Identities=25%  Similarity=0.363  Sum_probs=39.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2emf_A            2 SSGS-SGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCS-SSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSS-CSCCCC
T ss_pred             cccc-ccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            4777 689999999998  9999999999999999999988 699987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.6e-11  Score=74.33  Aligned_cols=45  Identities=22%  Similarity=0.343  Sum_probs=41.2

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--c   46 (46)
T 2emh_A            2 SSGS-SGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-SCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSS-CSSSCC--C
T ss_pred             CCCC-CCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 699987  7

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=1.6e-11  Score=74.28  Aligned_cols=45  Identities=18%  Similarity=0.248  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+.+.|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2el4_A            2 SSGS-SGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCC-CSCCTT--C
T ss_pred             cccc-CCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            5777 589999999998  9999999999999999999988 699987  7

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.1e-11  Score=73.71  Aligned_cols=45  Identities=24%  Similarity=0.381  Sum_probs=41.2

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2ytd_A            2 SSGS-SGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYR-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCC-SSCSSC--C
T ss_pred             CCcc-ccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 799988  7

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=73.92  Aligned_cols=45  Identities=20%  Similarity=0.278  Sum_probs=40.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+.+.|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2ene_A            2 SSGS-SGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCS-SCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCC-CCSCCC--C
T ss_pred             Cccc-CCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999988 699987  7

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.8e-11  Score=73.16  Aligned_cols=45  Identities=16%  Similarity=0.239  Sum_probs=41.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~h~~-~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2ytm_A            2 SSGS-SGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQR-PSGPSS--G   46 (46)
T ss_dssp             CSCC-CCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCC-CCCCCC--C
T ss_pred             CCCc-CCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999999998 799988  7

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.9e-11  Score=73.95  Aligned_cols=45  Identities=20%  Similarity=0.317  Sum_probs=40.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      +|++ .|+++++|.|++  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2em5_A            2 SSGS-SGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSC-CSSCCC--C
T ss_pred             CCcC-CCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 699987  7

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=73.97  Aligned_cols=45  Identities=27%  Similarity=0.410  Sum_probs=40.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--c   46 (46)
T 2eq0_A            2 SSGS-SGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCC-CSCCSC--C
T ss_pred             CCCc-CCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5777 689999999998  9999999999999999999998 699987  7

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.3e-11  Score=73.55  Aligned_cols=45  Identities=22%  Similarity=0.279  Sum_probs=40.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|++  |++.|.+...|..|+++|++++ +|.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2eme_A            2 SSGS-SGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-TTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCS-CCSSCC--C
T ss_pred             CCCC-CCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCC-CCCCCC--C
Confidence            5887 699999999998  9999999999999999999998 699987  7

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.3e-11  Score=73.57  Aligned_cols=45  Identities=20%  Similarity=0.340  Sum_probs=39.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2em7_A            2 SSGS-SGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-SSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCC-CSSTTC--C
T ss_pred             CCCC-CCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            4777 689999999998  9999999999999999999988 699987  7

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=73.59  Aligned_cols=45  Identities=20%  Similarity=0.271  Sum_probs=41.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ +|.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2epw_A            2 SSGS-SGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDK-HSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCC-CSCCCC--C
T ss_pred             cCcc-cCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 699987  7

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.3e-11  Score=73.53  Aligned_cols=45  Identities=20%  Similarity=0.193  Sum_probs=40.5

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      +|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|+.  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2en8_A            2 SSGS-SGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEK-CSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSC-SSCCSC--C
T ss_pred             Cccc-cCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            5787 699999999998  9999999999999999999998 699987  7

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.13  E-value=2.7e-11  Score=73.28  Aligned_cols=45  Identities=22%  Similarity=0.292  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2em9_A            2 SSGS-SGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEK-PSGPSS--G   46 (46)
T ss_dssp             CSCC-SCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCC-CCSTTC--C
T ss_pred             CCCC-CCCCCcCeECCc--cccccCChHHHHHHHHHhCCCC-CCCCCC--C
Confidence            5777 689999999998  9999999999999999999988 699987  7

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=73.19  Aligned_cols=44  Identities=20%  Similarity=0.315  Sum_probs=39.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      +|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~   45 (46)
T 2ep3_A            2 SSGS-SGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCS-SSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSC-CCCTTC
T ss_pred             CCCC-CCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999988 699987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.8e-11  Score=74.03  Aligned_cols=45  Identities=22%  Similarity=0.343  Sum_probs=40.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2yu8_A            2 SSGS-SGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGK-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCC-CSCSCC--C
T ss_pred             CcCc-CCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCC-CCCCCC--C
Confidence            5777 699999999998  9999999999999999999998 699987  7

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.5e-11  Score=73.40  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=41.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~h~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2en6_A            2 SSGS-SGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEK-PSGPSS--G   46 (46)
T ss_dssp             CCSC-CCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCC-CSSSCC--C
T ss_pred             CCCC-ccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCC-CCCCCC--C
Confidence            5777 699999999998  9999999999999999999998 699987  7

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.4e-11  Score=72.80  Aligned_cols=45  Identities=20%  Similarity=0.268  Sum_probs=41.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2yso_A            2 SSGS-SGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQK-NSGPSS--G   46 (46)
T ss_dssp             CCSC-CSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCS-CCCTTC--C
T ss_pred             Cccc-ccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999999998 699987  7

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=73.59  Aligned_cols=44  Identities=23%  Similarity=0.365  Sum_probs=38.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~   45 (46)
T 2en1_A            2 SSGS-SGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEK-PSGPSS   45 (46)
T ss_dssp             CSTT-CCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCC-CSCCCC
T ss_pred             Cccc-CCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5777 688899999988  9999999999999999998888 699987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.4e-11  Score=72.80  Aligned_cols=45  Identities=20%  Similarity=0.297  Sum_probs=40.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~h~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2enc_A            2 SSGS-SGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEK-PSGPSS--G   46 (46)
T ss_dssp             CCSS-CCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSS-CCSSCC--C
T ss_pred             CCCC-CCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999999998 699987  7

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.12  E-value=3.8e-11  Score=72.59  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~h~~-~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2el6_A            2 SSGS-SGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREK-PSGPSS--G   46 (46)
T ss_dssp             CSCC-SSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSS-CCSCCC--C
T ss_pred             CCCC-CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            4677 689999999998  9999999999999999999988 699987  7

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.8e-11  Score=73.17  Aligned_cols=45  Identities=16%  Similarity=0.247  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         2 ~H~~-~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2ysp_A            2 SSGS-SGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGER-PSGPSS--G   46 (46)
T ss_dssp             CCCC-CCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCC-SSCCSC--C
T ss_pred             CCCc-CCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCC-CCCCCC--C
Confidence            4777 689999999998  9999999999999999999988 699987  7

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=73.97  Aligned_cols=44  Identities=25%  Similarity=0.368  Sum_probs=36.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ytg_A            2 SSGS-SGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCC-SSCSCC
T ss_pred             CCCC-CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5777 588888888888  8888888888888888888888 688877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=4.5e-11  Score=74.98  Aligned_cols=47  Identities=23%  Similarity=0.489  Sum_probs=39.8

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHH-hhcCCCCceeccCCCccccccc
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPYQDCLMSYVA  341 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~~~C~~~f~~  341 (359)
                      .|++++||.|+.  |++.|.....|..|++ +|++++ +|.|++  |+++|.+
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k-~~~C~~--C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSER-PHKCQV--WVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCC-CCCSSS--SCCSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCC-CccCCC--CCCCCCC
Confidence            477888899988  9999999999999986 888888 699988  9988875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.8e-11  Score=72.10  Aligned_cols=45  Identities=20%  Similarity=0.328  Sum_probs=41.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHH-hhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|++ +|++++ ||.|++  |
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k-~~~C~~--C   47 (47)
T 2epx_A            2 SSGS-SGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEK-PSGPSS--G   47 (47)
T ss_dssp             CCCC-CCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSC-SSSCCC--C
T ss_pred             cccc-ccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCC-CCCCCC--C
Confidence            4777 699999999998  9999999999999999 999998 799987  7

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4e-11  Score=72.48  Aligned_cols=45  Identities=20%  Similarity=0.247  Sum_probs=40.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ +|.|++  |
T Consensus         2 ~h~~-~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~--C   46 (46)
T 2em8_A            2 SSGS-SGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEK-LSGPSS--G   46 (46)
T ss_dssp             CCCC-CCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCC-CCCSCC--C
T ss_pred             CCCC-CCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCC-CCCCCC--C
Confidence            4677 699999999998  9999999999999999999998 699987  7

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.9e-11  Score=80.29  Aligned_cols=57  Identities=23%  Similarity=0.477  Sum_probs=33.1

Q ss_pred             CCCccccccCCcCccccChHhhhccccccccCCcccCCC-CCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         262 STKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCP-LVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       262 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +++||.|..  |++.|. ...|..|++ . ++++||.|+ .  |++.|...+.|..|+++|....
T Consensus         7 ~~~~~~C~~--C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTY--CTKEFV-FDTIQSHQY-Q-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSS--SCCEEE-HHHHHHHHH-H-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccc--cCCccC-HHHHHHHHH-H-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccC
Confidence            445566644  666666 666666655 3 555666665 5  6666666666666666655443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5e-11  Score=72.02  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=40.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2em2_A            2 SSGS-SGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-SCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCC-SSCSSC
T ss_pred             CCCC-CCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5777 699999999998  9999999999999999999998 799987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.7e-11  Score=70.95  Aligned_cols=44  Identities=20%  Similarity=0.370  Sum_probs=40.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ep1_A            2 SSGS-SGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGEN-PSGPSS   45 (46)
T ss_dssp             CCCC-CCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSC-CCSSSC
T ss_pred             cccc-CCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5887 699999999998  9999999999999999999998 699975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.2e-11  Score=71.33  Aligned_cols=44  Identities=23%  Similarity=0.340  Sum_probs=39.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2enf_A            2 SSGS-SGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSS-CCCCSC
T ss_pred             CCCc-CCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCC-CCCCCC
Confidence            5777 699999999998  9999999999999999999998 699975

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.2e-11  Score=71.06  Aligned_cols=44  Identities=20%  Similarity=0.340  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eq2_A            2 SSGS-SGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-SSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCC-CCCCCC
T ss_pred             Cccc-ccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.6e-11  Score=69.41  Aligned_cols=42  Identities=14%  Similarity=0.289  Sum_probs=37.7

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      |++ .|++++||.|+.  |++.|.+.+.|..|+++|++++ +|.|+
T Consensus         1 H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   42 (42)
T 2yte_A            1 GSS-GSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKS-GPSSG   42 (42)
T ss_dssp             CCS-SSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCS-SCCCC
T ss_pred             CCc-CcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCC-CCCCC
Confidence            566 589999999998  9999999999999999999998 69885

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.2e-11  Score=71.06  Aligned_cols=44  Identities=23%  Similarity=0.350  Sum_probs=39.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2yti_A            2 SSGS-SGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSC-CSSTTC
T ss_pred             CCCc-CCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCC-CCCCCC
Confidence            5777 699999999998  9999999999999999999998 699975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.7e-11  Score=70.94  Aligned_cols=44  Identities=20%  Similarity=0.272  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~   45 (46)
T 2emg_A            2 SSGS-SGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGER-PSGPSS   45 (46)
T ss_dssp             CCCC-CCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCC-CSCSCC
T ss_pred             CCCC-CCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.08  E-value=6.4e-11  Score=71.54  Aligned_cols=44  Identities=27%  Similarity=0.354  Sum_probs=40.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2emj_A            2 SSGS-SGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSC-SSSSCC
T ss_pred             CCCC-CCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 799975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.08  E-value=7.3e-11  Score=69.74  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=36.9

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      |++ .|+++++|.|+.  |++.|.+...|..|+++|++++ +|.|+
T Consensus         1 H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   42 (42)
T 2el5_A            1 GSS-GSSGENPYECSE--CGKAFNRKDQLISHQRTHAGES-GPSSG   42 (42)
T ss_dssp             CCS-SSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCC-SCCCC
T ss_pred             CCC-CCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCC-CCCCC
Confidence            566 588999999998  9999999999999999999988 69885

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1e-10  Score=70.60  Aligned_cols=44  Identities=23%  Similarity=0.338  Sum_probs=40.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~h~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2en9_A            2 SSGS-SGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCS-SCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSC-CCSCCC
T ss_pred             CCCC-CCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5777 699999999998  9999999999999999999998 699975

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.5e-11  Score=71.24  Aligned_cols=44  Identities=20%  Similarity=0.396  Sum_probs=40.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~C~~   45 (46)
T 2em3_A            2 SSGS-SGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCC-CCCSCC
T ss_pred             CCCC-CCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5888 699999999998  9999999999999999999998 799975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.5e-11  Score=70.77  Aligned_cols=44  Identities=25%  Similarity=0.404  Sum_probs=39.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2yth_A            2 SSGS-SGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCS-CCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCC-CSSCCC
T ss_pred             Cccc-CCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.2e-11  Score=71.31  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=40.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eow_A            2 SSGS-SGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCS-CSCTTC
T ss_pred             CccC-CCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.7e-11  Score=70.72  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=40.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eq1_A            2 SSGS-SGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSC-CSSCCC
T ss_pred             Cccc-ccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5887 699999999998  9999999999999999999998 699975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7.5e-11  Score=71.25  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=40.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2em4_A            2 SSGS-SGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEK-PSGPSS   45 (46)
T ss_dssp             CSCC-CCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSS-CCCCCC
T ss_pred             CCcc-ccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1e-10  Score=70.59  Aligned_cols=44  Identities=27%  Similarity=0.484  Sum_probs=39.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2em6_A            2 SSGS-SGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCS-CCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSC-CCCTTC
T ss_pred             CCcc-ccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5777 699999999998  9999999999999999999998 699975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.3e-11  Score=71.30  Aligned_cols=44  Identities=25%  Similarity=0.362  Sum_probs=39.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ytp_A            2 SSGS-SGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-SSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCC-CCSSCC
T ss_pred             Cccc-CcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5777 689999999998  9999999999999999999988 699975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.2e-10  Score=69.52  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=39.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   44 (44)
T 2en7_A            2 SSGS-SGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGES-GPSSG   44 (44)
T ss_dssp             CSCC-CSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSS-SSCCC
T ss_pred             CCCc-CCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCC-CCCCC
Confidence            5787 699999999998  9999999999999999999998 69885

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-10  Score=70.03  Aligned_cols=44  Identities=18%  Similarity=0.356  Sum_probs=39.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ +|.|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eoh_A            2 SSGS-SGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGER-SSGPSS   45 (46)
T ss_dssp             CCCC-SCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCC-SCSTTC
T ss_pred             CCCC-CcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            4777 699999999998  9999999999999999999998 799974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1e-10  Score=70.64  Aligned_cols=44  Identities=23%  Similarity=0.382  Sum_probs=39.5

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ +|.|++
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2emi_A            2 SSGS-SGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-SCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCC-CCSCCC
T ss_pred             CCCc-ccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.7e-11  Score=71.19  Aligned_cols=44  Identities=25%  Similarity=0.419  Sum_probs=39.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-p~~C~~   45 (46)
T 2eor_A            2 SSGS-SGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CSSS-SSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCC-CSSSTT
T ss_pred             CCCc-CcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.1e-11  Score=70.85  Aligned_cols=44  Identities=20%  Similarity=0.271  Sum_probs=39.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ytf_A            2 SSGS-SGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-SSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSS-SSCCCC
T ss_pred             CCCC-CCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5777 689999999998  9999999999999999999988 699975

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=70.52  Aligned_cols=44  Identities=23%  Similarity=0.405  Sum_probs=38.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|++
T Consensus         2 ~h~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eon_A            2 SSGS-SGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGER-PSGPSS   45 (46)
T ss_dssp             CCSS-SCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCC-SCTTSC
T ss_pred             CCCC-CCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCC-CCCCCC
Confidence            3677 689999999998  9999999999999999999988 699975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.7e-11  Score=70.74  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=39.2

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2yrj_A            2 SSGS-SGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCC-SSCSCC
T ss_pred             CCcc-CCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCC-CCCCCC
Confidence            5777 689999999998  9999999999999999999988 699975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.2e-10  Score=69.87  Aligned_cols=42  Identities=21%  Similarity=0.473  Sum_probs=38.4

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCcc
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCL  336 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~  336 (359)
                      .|++++||.|+.  |++.|.....|..|+++|++++ +|.|++  ||
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~-~~~C~~--cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSV-GKSGPS--SG   45 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCC-CCCCCC--CC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCC-CCCCcC--CC
Confidence            588999999998  9999999999999999999988 699998  86

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.3e-11  Score=70.82  Aligned_cols=44  Identities=25%  Similarity=0.407  Sum_probs=38.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-p~~C~~   45 (46)
T 2yts_A            2 SSGS-SGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CCSC-CCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCC-SSCCCC
T ss_pred             CCCC-CCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCC-CcCCCC
Confidence            5777 688999999998  9999999999999999999988 699875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.8e-11  Score=70.71  Aligned_cols=44  Identities=23%  Similarity=0.466  Sum_probs=39.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ +|.|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~~   45 (46)
T 2eoz_A            2 SSGS-SGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQET-LSGPSS   45 (46)
T ss_dssp             CSCC-CCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCC-SSSCCC
T ss_pred             Cccc-cCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.04  E-value=6.4e-11  Score=74.29  Aligned_cols=51  Identities=14%  Similarity=0.192  Sum_probs=39.6

Q ss_pred             CccccChHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCce
Q psy1773         274 KLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF  328 (359)
Q Consensus       274 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  328 (359)
                      ++.|.....|..|++ .|+++++|.|+.  |++.|...+.|..|+++|++++ ||
T Consensus         3 ~k~~~~~~~l~~h~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-p~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRS-RSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAK-PG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHH-HHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTS-CC
T ss_pred             ccccCCCcchhhHHH-hcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCC-CC
Confidence            356777777888877 578888888887  8888888888888888888877 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=70.33  Aligned_cols=44  Identities=20%  Similarity=0.363  Sum_probs=39.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      +|++ .|++++||.|+.  |++.|.....|..|+++|++++ +|.|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2yto_A            2 SSGS-SGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGER-HSGPSS   45 (46)
T ss_dssp             CCCC-CCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCC-BTTTBC
T ss_pred             Cccc-ccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCC-CCCCCC
Confidence            5888 699999999998  9999999999999999999998 799973

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=70.27  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=40.2

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ +|.|++
T Consensus         2 ~h~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2emz_A            2 SSGS-SGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREK-SSGPSS   45 (46)
T ss_dssp             CCCS-CSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTT-CCCSCC
T ss_pred             CCCc-CCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5787 699999999998  9999999999999999999998 699975

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=69.46  Aligned_cols=43  Identities=16%  Similarity=0.268  Sum_probs=38.5

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   44 (44)
T 2eof_A            2 SSGS-SGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGES-GPSSG   44 (44)
T ss_dssp             CCSS-CCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSS-CSCCC
T ss_pred             CCcc-CCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCC-CCCCC
Confidence            5777 699999999998  9999999999999999999988 69885

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.03  E-value=1.3e-10  Score=70.22  Aligned_cols=43  Identities=28%  Similarity=0.410  Sum_probs=28.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emk_A            3 SGSSG-TGEKPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCC-SSSCSCBCSSSCCBCSCHHHHHHHHH-HHSSCCCSSCCC
T ss_pred             CCCcc-CCCCceECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            55566 44566777777777777777777765 666777777654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.03  E-value=3.7e-11  Score=77.76  Aligned_cols=55  Identities=24%  Similarity=0.504  Sum_probs=47.2

Q ss_pred             hhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHH
Q psy1773         283 LKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLY  346 (359)
Q Consensus       283 l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~  346 (359)
                      |..|++ .|++++||.|+.  |++.|.....|.   ++|++++ ||.|++  ||+.|....++.
T Consensus         2 L~~h~~-~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k-~~~C~~--C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDER-DSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTG-TFRCTF--CHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSS-SCCSSSEEECSS--SCCEEEHHHHHH---HEETTTT-EEBCSS--SCCBCEECTTCS
T ss_pred             hhhHHH-HcCCCCCccCCC--CCchhccHHHhH---hhcCCCC-CEECCC--CCCccccCcccc
Confidence            567888 699999999998  999999988886   8899988 799999  999998876654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=69.66  Aligned_cols=43  Identities=21%  Similarity=0.354  Sum_probs=38.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ +|.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   44 (44)
T 2eoj_A            2 SSGS-SGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQS-GPSSG   44 (44)
T ss_dssp             CSCC-SSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSC-SCCCC
T ss_pred             CCcc-ccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCC-CCCCC
Confidence            5777 699999999998  9999999999999999999988 69884

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=69.86  Aligned_cols=43  Identities=26%  Similarity=0.322  Sum_probs=27.1

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2eq4_A            3 SGSSG-TGEKLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCS-SCCCCCCBTTTTBCCSCHHHHHHHHH-HCCSSSCCCCCC
T ss_pred             CcccC-CCCCCeECCCCCCccCchHHHHHHHH-hcCCCCCCCCCC
Confidence            55555 44466666666666666666666655 566666666653

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.4e-10  Score=69.32  Aligned_cols=43  Identities=16%  Similarity=0.290  Sum_probs=38.5

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ +|.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   44 (44)
T 2yu5_A            2 SSGS-SGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKS-GPSSG   44 (44)
T ss_dssp             CCSC-CCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCC-SSCCC
T ss_pred             CCcc-ccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCC-CCCCC
Confidence            5777 699999999998  9999999999999999999988 69884

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.02  E-value=4.8e-10  Score=74.88  Aligned_cols=62  Identities=26%  Similarity=0.481  Sum_probs=52.7

Q ss_pred             CCCCCCeeeccCCCCCCcccChhHHHhHHhhhCCCCccccccCCCCCccchhhcccHHHHHhhhhhc
Q psy1773          72 NSKKQQLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKLTTANNTPCMWGFFSKHKLLRHMTSH  138 (359)
Q Consensus        72 ~~~~~~~~~C~~~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~~~~~~~~C~~~f~~~~~l~~H~~~~  138 (359)
                      .....++|.|.+..|++.|.....|..|++.|++++||.|.+-     .|++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~-----~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWK-----GCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCT-----TCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCC-----CCCcccCCHHHHHhHhhcC
Confidence            3456788999844599999999999999999999999999521     2999999999999998765

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=68.81  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=34.8

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|
T Consensus         1 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C   42 (42)
T 2ytb_A            1 GSSG-SSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSG-PSSG   42 (42)
T ss_dssp             CCCC-CCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCS-CCCC
T ss_pred             CCcc-ccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCC-CCCC
Confidence            3676 588888888888  8888888888888888888888 6876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.8e-10  Score=69.57  Aligned_cols=43  Identities=28%  Similarity=0.356  Sum_probs=28.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|++
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eoq_A            3 SGSSG-TGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCS-SSSCSCCCSSSCCCCSSHHHHHHHHH-HTTCCCSSSCCC
T ss_pred             CCCCC-CCCCCcCCCcCCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            55666 44566777777777777777777765 677777777754

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=69.64  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=27.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytj_A            3 SGSSG-TGEKPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGPSS   45 (46)
T ss_dssp             SSCTT-SSCCSEECSSSCCEESSHHHHHHHHH-HTSCCCCSSCSC
T ss_pred             cccCC-CCCcCeECCCCChhhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            55565 44466666666666666666666655 666666666653

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=69.58  Aligned_cols=43  Identities=28%  Similarity=0.431  Sum_probs=28.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2eov_A            3 SGSSG-TGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGPSS   45 (46)
T ss_dssp             CCCCC-SSCCSCBCSSSCCBCSSHHHHHHHHH-HHSCCSSCCSCC
T ss_pred             CCCCC-CCCCCccCCccChhhCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            55666 44566777777777777777777765 677777777654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.4e-10  Score=70.06  Aligned_cols=44  Identities=23%  Similarity=0.282  Sum_probs=38.5

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcC-CCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE-NKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++ ++ ||.|++
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~-~~~C~~   46 (46)
T 2eoy_A            2 SSGS-SGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVK-SGPSSG   46 (46)
T ss_dssp             CCCC-CCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCT-TSSSCC
T ss_pred             CCcc-ccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            4777 689999999998  99999999999999999998 88 699864

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=70.13  Aligned_cols=35  Identities=26%  Similarity=0.457  Sum_probs=16.3

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      +++|.|++|++.|.....|..|++ +|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPS   44 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGG-GTSCCCCCSCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhh-hcCCCCCCCCC
Confidence            344444444444444444444433 44444444443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=70.34  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=26.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|...+.|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emp_A            3 SGSSG-TGVKPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCS-SCCCSEECSSSCCEESCHHHHHHHHH-HHHCCSCCSCCC
T ss_pred             ccccc-CCCcCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            55555 34466666666666666666666655 566666666654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.4e-10  Score=69.23  Aligned_cols=43  Identities=16%  Similarity=0.311  Sum_probs=37.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C~   44 (44)
T 2emb_A            2 SSGS-SGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKS-GPSSG   44 (44)
T ss_dssp             CCCS-CCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCC-CTTCC
T ss_pred             Cccc-ccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCC-CcCCC
Confidence            5777 688899999988  9999999999999999999888 68884

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.8e-10  Score=69.48  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=36.5

Q ss_pred             ccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         287 NKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       287 ~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      ++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         4 ~~-~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2ep0_A            4 GS-SGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CC-SSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSC-CCSCCC
T ss_pred             CC-CCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCC-CCCCCC
Confidence            44 588889999988  9999999999999999999888 699987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.5e-10  Score=69.81  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=26.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emm_A            3 SGSSG-TGERPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCS-SCCCSEECSSSCCEESSHHHHHHHHH-HHSCCCTTSSSC
T ss_pred             CcCCc-CCCCCeeCCCCChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            55555 34466666666666666666666655 566666666643

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=70.07  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=26.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emy_A            3 SGSSG-TGENPYECHECGKAFSRKYQLISHQR-THAGEKPSGPSS   45 (46)
T ss_dssp             CCCCC-CSSCCEECSSSCCEESSHHHHHHHHH-HHTTSCCSCSSC
T ss_pred             CCCCC-CCCcCcCCCCCCcccCcHHHHHHHHH-HcCCCCCCCCCC
Confidence            55555 34466666666666666666666655 566666666654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=70.06  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=21.7

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eoe_A            3 SGSSG-TGEKPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGPS   44 (46)
T ss_dssp             CSSCC-CCCCSSEETTTTEECSSHHHHHHHHG-GGSCCCSCSSC
T ss_pred             CCCCC-CCCCCeECCCcChhhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44444 33455555555555555555555544 45555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.7e-10  Score=72.31  Aligned_cols=46  Identities=24%  Similarity=0.298  Sum_probs=22.6

Q ss_pred             ccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCcccC
Q psy1773         260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSFL  309 (359)
Q Consensus       260 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~  309 (359)
                      |++++||.|.+  |++.|.....|..|++..|++++||.|++  |++.|.
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPS   52 (54)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCC
Confidence            34445555543  55555555555555432355555555554  555554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.00  E-value=1.3e-10  Score=70.10  Aligned_cols=40  Identities=25%  Similarity=0.401  Sum_probs=18.5

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|++++||+|+.  |++.|...+.|..|++ .|++++||.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2em0_A            6 SGMGEKTWKCRE--CDMCFSQASSLRLHQN-VHVGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCCCSS--SCCCCSSHHHHHHHGG-GGSSSSCSCSSC
T ss_pred             ccCCCcCeECCC--CCcccCCHHHHHHHHH-HcCCCCCcCCCC
Confidence            344444444433  4444444444444444 244444444443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=69.78  Aligned_cols=42  Identities=21%  Similarity=0.386  Sum_probs=21.7

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eop_A            3 SGSSG-TGEKPHECRECGKSFSFNSQLIVHQR-IHTGENPSGPS   44 (46)
T ss_dssp             CCCSC-CCCCSCBCTTTCCBCSSHHHHHHHHT-TTTTSCCSCCC
T ss_pred             Ccccc-CCCCCeeCCCCCchhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44444 33455555555555555555555544 45555555554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=69.75  Aligned_cols=43  Identities=21%  Similarity=0.386  Sum_probs=27.0

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2ytd_A            3 SGSSG-SGEKPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCS-CCCCSEECSSSCCEESSHHHHHHHHH-HHTCCCSSCSSC
T ss_pred             Ccccc-CCCcCeECCCCCCeeCChHHHHHHHH-HcCCCCCCCCCC
Confidence            55555 34466666666666666666666655 566666666654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.8e-10  Score=68.73  Aligned_cols=41  Identities=20%  Similarity=0.268  Sum_probs=23.1

Q ss_pred             hhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         227 QRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       227 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      +++| .++++|.|.+|++.|...+.|..|++ +|++++||.|.
T Consensus         2 ~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   42 (44)
T 2emx_A            2 SSGS-SGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPS   42 (44)
T ss_dssp             CCCC-SSCCCEECSSSSCEESSHHHHHHHHH-HHTSSCSCSCC
T ss_pred             CCCc-CCCcCccCCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            4444 34455666666666666666666654 55555566554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2e-10  Score=67.80  Aligned_cols=41  Identities=20%  Similarity=0.448  Sum_probs=35.5

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      |++ .|++++||.|+.  |++.|.+.+.|..|+++|++++ ||.|
T Consensus         2 H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C   42 (42)
T 2eos_A            2 SSG-SSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSG-PSSG   42 (42)
T ss_dssp             CCS-CCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCS-STTC
T ss_pred             CCc-ccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCC-CCCC
Confidence            666 588899999988  9999999999999999999888 6877

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=69.39  Aligned_cols=41  Identities=27%  Similarity=0.404  Sum_probs=37.4

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCc
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC  335 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C  335 (359)
                      .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|++  |
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREK-PSGPSS--G   46 (46)
T ss_dssp             SCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCC-CCSCCC--C
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCC-CCCCCC--C
Confidence            588999999998  9999999999999999999988 699987  7

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.00  E-value=2e-10  Score=69.32  Aligned_cols=43  Identities=26%  Similarity=0.348  Sum_probs=26.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ely_A            3 SGSSG-TGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCC-CCCCSBCCSSSCCCBSSTTHHHHHHH-HHSCCSSCSCCC
T ss_pred             CCCCC-CCCCCcccCccCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            45555 34466666666666666666666655 566666666643

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.5e-10  Score=68.86  Aligned_cols=44  Identities=18%  Similarity=0.315  Sum_probs=38.4

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|+++++|.|++  |++.|.....|..|+++|++++ ||.|+.
T Consensus         2 ~h~~-~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2enh_A            2 SSGS-SGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEK-PSGPSS   45 (46)
T ss_dssp             CCCC-CCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSC-CCCCCC
T ss_pred             CCCC-CcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            3666 589999999998  9999999999999999999988 699874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2e-10  Score=69.34  Aligned_cols=44  Identities=20%  Similarity=0.314  Sum_probs=39.1

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ ||.|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eq3_A            2 SSGS-SGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKK-PSGPSS   45 (46)
T ss_dssp             CCCC-SSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCC-CCCSCC
T ss_pred             Cccc-CCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            5777 689999999998  9999999999999999999998 699974

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=69.90  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=20.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eml_A            3 SGSSG-TGEKPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGPS   44 (46)
T ss_dssp             CCCCC-SSCCSEECSSSCCEESSHHHHHHHHG-GGSSCCCSCSS
T ss_pred             ccCCc-CCCCCeeCCCcCCccCCHHHHHHHHH-HhcCCCCCCCC
Confidence            34444 33345555555555555555555544 45555555553

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=69.81  Aligned_cols=43  Identities=21%  Similarity=0.426  Sum_probs=25.7

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|++
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2ytk_A            3 SGSSG-SGEKPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCS-SSSCSEECSSSCCEESSHHHHHHHHH-HHSSSSCSSCCC
T ss_pred             CcccC-CCCCCEeCCcCCCccCCHHHHHHHHH-HHCCCCCCCCCC
Confidence            45555 34456666666666666666666655 566666666643

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=70.04  Aligned_cols=43  Identities=26%  Similarity=0.381  Sum_probs=26.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emh_A            3 SGSSG-TGERPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSC-SCCCSEECTTTCCEESSHHHHHHHHH-HHHCSSCSSSCC
T ss_pred             CCCCC-CCCCCcCCCCCCchhCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            55555 34466666666666666666666655 566666666643

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.99  E-value=1.3e-10  Score=70.20  Aligned_cols=40  Identities=25%  Similarity=0.364  Sum_probs=19.0

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|++++||.|.+  |++.|...+.|..|++ .|++++||.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2el4_A            6 SGTGVKPYGCSQ--CAKTFSLKSQLIVHQR-SHTGVKPSGPSS   45 (46)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHGG-GSSSCCCSCCTT
T ss_pred             CCCCCCceECCC--CCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            344444444443  4444444444444444 344444444443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.7e-10  Score=67.35  Aligned_cols=43  Identities=23%  Similarity=0.270  Sum_probs=38.6

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|+
T Consensus         2 ~h~~-~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~   44 (44)
T 2eou_A            2 SSGS-SGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGES-GPSSG   44 (44)
T ss_dssp             CCSC-SCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSC-CCCCC
T ss_pred             CCCC-CCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCC-CCCCC
Confidence            3676 699999999998  9999999999999999999998 69984

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=69.95  Aligned_cols=43  Identities=26%  Similarity=0.326  Sum_probs=26.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|...+.|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eoo_A            3 SGSSG-SGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGPSS   45 (46)
T ss_dssp             CCCCC-SCCCCEECSSSCCEESSHHHHHHHHH-HHHSTTSSCCSC
T ss_pred             CCCCC-CCCCCEEccccCcccCCHHHHHHHHH-HHcCCCCCCCCC
Confidence            55555 44466666666666666666666655 566666666653

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.99  E-value=2.5e-10  Score=67.37  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=36.6

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      |++ .|++++||.|+.  |++.|.+.+.|..|+++|++++ ||.|
T Consensus         2 H~~-~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k-~~~C   42 (42)
T 2epc_A            2 SSG-SSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSG-PSSG   42 (42)
T ss_dssp             CCS-CCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCC-CCCC
T ss_pred             CCc-cCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCC-CCCC
Confidence            666 689999999998  9999999999999999999998 6887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.99  E-value=1.5e-10  Score=69.84  Aligned_cols=42  Identities=26%  Similarity=0.430  Sum_probs=20.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ema_A            3 SGSSG-TGEKRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGPS   44 (46)
T ss_dssp             SCSSC-TTSCCEECSSSCCEESSHHHHHHHHT-GGGCCCCCSSS
T ss_pred             CccCC-CCCcCcCCCCCcchhCCHHHHHHHHH-hcCCCCCCCCC
Confidence            34444 33345555555555555555555544 45555555553

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=69.04  Aligned_cols=42  Identities=24%  Similarity=0.389  Sum_probs=20.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSG-TGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCSSC-CCCCSBCCTTTCCCBSSHHHHHHHHT-TTTTCCCCSSC
T ss_pred             CCCCc-CCCCCeECCCCCceeCCHHHHHHHHH-HhCCCCCCCCC
Confidence            34444 33345555555555555555555544 45555555553

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=69.81  Aligned_cols=42  Identities=24%  Similarity=0.383  Sum_probs=20.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq0_A            3 SGSSG-TGEKPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCT-TCCCCEECTTTCCEESSHHHHHHHHT-TTCCCCCSCCS
T ss_pred             CCcCC-CCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            34444 33345555555555555555555544 45555555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.1e-10  Score=69.22  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=23.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ep2_A            3 SGSSG-TGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGPS   44 (46)
T ss_dssp             SSSCS-SCCCSEECSSSCCEESSHHHHHHHHH-TTSSCCSCCSC
T ss_pred             CCCCC-CCCcCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44455 34455556666666666556666654 55555555554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=69.41  Aligned_cols=42  Identities=24%  Similarity=0.441  Sum_probs=21.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2ytr_A            3 SGSSG-TGEKPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             SSCCC-SSCCTTCCTTTCCCCSSHHHHHHHHT-TTTTCSCCCSC
T ss_pred             CCcCC-CCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            44444 33455555555555555555555544 45555555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.5e-10  Score=69.88  Aligned_cols=42  Identities=19%  Similarity=0.447  Sum_probs=19.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2em5_A            3 SGSSG-SSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-CCSCSEECSSSCCEESSHHHHHHHHT-TTSCSCCSSCC
T ss_pred             CcCCC-CCCCCeECCcCCCccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            34444 23344555555555555555555543 44445555443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=69.36  Aligned_cols=43  Identities=23%  Similarity=0.301  Sum_probs=26.1

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2epw_A            3 SGSSG-TGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGPSS   45 (46)
T ss_dssp             CCCCC-CCCCSEECSSSCCEESSSHHHHHHHH-HCCSCCCSCCCC
T ss_pred             CcccC-CCCCCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            45555 34466666666666666666666655 566666666643

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=68.76  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=20.1

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSG-AGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGPS   44 (46)
T ss_dssp             CSSCS-SCCCSCBCSSSCCBCSCHHHHHHHHT-TTCCSCSSCCC
T ss_pred             CCcCc-CCCCCcCCCccChhhCChHHHHHHHH-HhCCCCCCCCC
Confidence            33444 33344555555555555555555544 45555555553

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=69.26  Aligned_cols=42  Identities=24%  Similarity=0.438  Sum_probs=20.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eme_A            3 SGSSG-SGEKPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCTT-CCCCSEECSSSCCEESSHHHHHHHHG-GGCCCSCCSSC
T ss_pred             CCCCC-CCCCCeECCCCChhhCCHHHHHHHHH-hcCCCCCCCCC
Confidence            44444 33345555555555555555555544 45555555553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=1.8e-10  Score=70.24  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=33.8

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccc
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLM  337 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~  337 (359)
                      .|.++++|.|++  |++.|.+...|..|+++|++++ ||.|++  |++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~--C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEK-PYSSGP--SSG   48 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCC-CCCSCC--CCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCC-CccCCC--CCC
Confidence            366777888887  8888888888888888888877 688887  874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=68.77  Aligned_cols=43  Identities=19%  Similarity=0.306  Sum_probs=26.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|++
T Consensus         3 h~~~h-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSG-TGEKPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCC-SSCCSSSBTTTTBCCSSHHHHHHHHH-HHHSCCCCCCCC
T ss_pred             CCcCC-CCCCCcCCCCCCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            45555 44466666666666666666666655 566666666654

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=69.20  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=19.2

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|...+.|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ene_A            3 SGSSG-TGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCSSC-CCSSSEECSSSCCEESSHHHHHHHHT-TTCCCCCCSCC
T ss_pred             cccCC-CCCCCeECCCCCchhCChHHHHHHHh-hcCCCCCCCCC
Confidence            33444 23344444444444444444444443 44444444443

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=67.95  Aligned_cols=41  Identities=22%  Similarity=0.469  Sum_probs=35.9

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      |++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|
T Consensus         2 H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~-~~~C   42 (42)
T 2en2_A            2 SSG-SSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSG-PSSG   42 (42)
T ss_dssp             CCC-CCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCC-SSCC
T ss_pred             CCc-ccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCC-CCCC
Confidence            666 588999999988  9999999999999999999988 6877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.8e-10  Score=69.53  Aligned_cols=42  Identities=26%  Similarity=0.376  Sum_probs=19.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2en8_A            3 SGSSG-SGEKSHTCDECGKNFCYISALRIHQR-VHMGEKCSGPS   44 (46)
T ss_dssp             CCCCC-CCCSSEECTTTCCEESSHHHHHHHHT-TTCCSCSSCCS
T ss_pred             ccccC-CCCCCeECCCcCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            34444 23344555555555555555555543 44444455443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=69.75  Aligned_cols=43  Identities=21%  Similarity=0.323  Sum_probs=39.0

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|++++||.|+.  |++.|.....|..|+++|++++ +|.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~C~   44 (46)
T 2en3_A            2 SSGS-SGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTD-PSGPS   44 (46)
T ss_dssp             CCCC-CSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSC-CSSCS
T ss_pred             cccc-ccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCC-CCCCC
Confidence            5887 699999999998  9999999999999999999998 69986

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.8e-10  Score=68.67  Aligned_cols=40  Identities=18%  Similarity=0.306  Sum_probs=18.4

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|++++||.|.+  |++.|.....|..|++ .|++++||.|++
T Consensus         6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2elz_A            6 SGSVEKPYKCED--CGKGYNRRLNLDMHQR-VHMGEKTSGPSS   45 (46)
T ss_dssp             CCCCCSSCBCSS--SCCBCSSHHHHHHHGG-GGGSCCCCCSCC
T ss_pred             CCCCCCCeeCcc--cCchhCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            344444444433  4444444444444444 344444444443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.4e-10  Score=68.24  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=24.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|.+
T Consensus         3 h~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSG-SGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCC-CCCCSEECSSSCCEESSHHHHHHHHH-HSCCSSCCSSCC
T ss_pred             CCCCC-CCCCCcCCCCCCCcCCChHHHHHHHH-HhCCCCCCCCCC
Confidence            44455 34455666666666666666666654 566666666543

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=69.27  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=25.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 h~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2en6_A            3 SGSSG-SGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGPSS   45 (46)
T ss_dssp             CSCCC-CSSCCEEETTTTEEESSHHHHHHHHH-HHSSCCCSSSCC
T ss_pred             CCCcc-CCCcCeECCCCCcccCchHHHHHHHH-HcCCCCCCCCCC
Confidence            45555 34456666666666666666666655 566666666643

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=69.25  Aligned_cols=43  Identities=23%  Similarity=0.412  Sum_probs=37.3

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|++++||.|+.  |++.|.+...|..|+++|++++ ||.|+
T Consensus         2 ~H~~-~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~C~   44 (44)
T 2eox_A            2 SSGS-SGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKS-GPSSG   44 (44)
T ss_dssp             CCCC-CCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCC-CCSCC
T ss_pred             CCCc-CCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCC-CCCCC
Confidence            5777 688999999998  9999999999999999999888 68884

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=5.9e-10  Score=67.20  Aligned_cols=42  Identities=24%  Similarity=0.319  Sum_probs=37.8

Q ss_pred             ccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         287 NKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       287 ~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      ++ .|+++++|.|+.  |++.|.+...|..|+++|++++ ||.|.+
T Consensus         4 ~~-~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (46)
T 2eom_A            4 GS-SGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEK-PSGPSS   45 (46)
T ss_dssp             CC-CCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCC-CSSCCC
T ss_pred             CC-CCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCC-CCCCCC
Confidence            44 588999999998  9999999999999999999998 699975

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.3e-10  Score=68.31  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=26.2

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yso_A            3 SGSSG-SREKSHQCRECGEIFFQYVSLIEHQV-LHMGQKNSGPSS   45 (46)
T ss_dssp             CSCCS-SCCCCEECTTTCCEESSHHHHHHHHH-HHSCCSCCCTTC
T ss_pred             ccccc-CCCCCEEccccChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            45555 34466666666666666666666655 566666666643

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=69.99  Aligned_cols=42  Identities=26%  Similarity=0.400  Sum_probs=21.2

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSG-TGEKPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCSSEECSSSCCEESSSHHHHHHTH-HHHSCCCSCSC
T ss_pred             cCcCC-CCCCCeECCcCCchhCCHHHHHHHHH-hcCCCCCCCCC
Confidence            44444 33355555555555555555555544 45555555554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.9e-10  Score=67.26  Aligned_cols=43  Identities=19%  Similarity=0.286  Sum_probs=37.7

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      .|++ .|++++||.|+.  |++.|...+.|..|+++|++++ ||.|+
T Consensus         2 ~H~~-~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~~g   44 (44)
T 2epv_A            2 SSGS-SGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVS-GPSSG   44 (44)
T ss_dssp             CCCC-CCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCS-CCCCC
T ss_pred             CCCc-ccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCC-CCCCC
Confidence            5777 689999999998  9999999999999999999988 68773

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=69.09  Aligned_cols=42  Identities=26%  Similarity=0.370  Sum_probs=20.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2ep3_A            3 SGSSG-TGEKPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGPS   44 (46)
T ss_dssp             CCSSS-SCCCSEECSSSCCEESSHHHHHHHHT-TTTTSCCCCTT
T ss_pred             CCCCC-CCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44444 33345555555555555555555544 45555555553

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.7e-10  Score=68.73  Aligned_cols=34  Identities=26%  Similarity=0.487  Sum_probs=15.6

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      ++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGPS   44 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHT-TSCSCCSSCCS
T ss_pred             CCeECCCCCCccCCHHHHHHHHH-hhCCCCCCCCC
Confidence            44444444444444444444443 44444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.94  E-value=3.2e-10  Score=68.37  Aligned_cols=35  Identities=26%  Similarity=0.370  Sum_probs=16.7

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      +++|.|++|++.|.....|..|++ +|++++||.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGPS   44 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHG-GGCCSSCCSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            344444444444444444444443 44444444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.94  E-value=7.5e-10  Score=65.64  Aligned_cols=40  Identities=23%  Similarity=0.285  Sum_probs=36.0

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|+++++|.|+.  |++.|.....|..|+++|++++ ||.|++
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDK-SGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTT-CSSSCC
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCC-CccCCC
Confidence            588899999998  9999999999999999999998 699864

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=69.44  Aligned_cols=40  Identities=30%  Similarity=0.389  Sum_probs=21.1

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|++++||.|.+  |++.|.....|..|++ .|++++||.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emf_A            6 SGTGGKHFECTE--CGKAFTRKSTLSMHQK-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCCEECSS--SCCEESCHHHHHHHGG-GTSCSSCSCCCC
T ss_pred             ccCCCCCeECCC--CCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            455555555543  5555555555555555 355555555544

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5e-10  Score=67.51  Aligned_cols=43  Identities=23%  Similarity=0.441  Sum_probs=27.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|++
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSG-SGEKPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSC-CCCCSEECSSSCCEESSHHHHHHHHH-HHCCCCSSCSSC
T ss_pred             CCCCC-CCCCCEECCcCCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            45555 44566666666666666666666665 666666666653

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.9e-10  Score=65.41  Aligned_cols=41  Identities=20%  Similarity=0.317  Sum_probs=26.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|++|++.|...+.|..|++ +|++++||+|
T Consensus         1 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGS-SGEKPYSCAECKETFSDNNRLVQHQK-MHTVKSGPSS   41 (42)
T ss_dssp             CCSSS-CSCCSCBCTTTCCBCSSHHHHHHHHH-HTSCCSSCCC
T ss_pred             CCcCc-CCCCCeECCCCCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            44555 44566777777777777777777765 6766666666

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4e-10  Score=67.94  Aligned_cols=43  Identities=23%  Similarity=0.300  Sum_probs=25.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|++
T Consensus         3 h~~~h-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2em8_A            3 SGSSG-SGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCC-CSCCSEECSSSCCEESSHHHHHHHHH-HHHCCCCCCSCC
T ss_pred             CCCCC-CCCCCeECcccCchhCCHHHHHHHHH-HHcCCCCCCCCC
Confidence            34455 34456666666666666666666655 566666666643

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.93  E-value=4.4e-10  Score=66.28  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=20.5

Q ss_pred             hhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         227 QRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       227 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      +++| .++++|.|++|++.|.....|..|++ +|++++||.|
T Consensus         2 ~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGS-SGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS   41 (42)
T ss_dssp             CSSS-SSCCSEECSSSCCEESSHHHHHHHHG-GGCCCCSCCC
T ss_pred             CCCC-CCCCCccCCCcChhhCCHHHHHHHHH-hcCCCCCCCC
Confidence            3444 33455555555555555555555544 4555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.1e-10  Score=68.13  Aligned_cols=43  Identities=26%  Similarity=0.351  Sum_probs=36.5

Q ss_pred             cccccccCCcccCCC--CCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         286 HNKSKHLNMRMFPCP--LVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       286 H~~~~H~~~~~~~C~--~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      |.+ .|+++++|.|.  .  |++.|.....|..|+++|++++ ||.|.+
T Consensus         3 ~~~-~H~~~k~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C~~   47 (48)
T 2ent_A            3 SGS-SGTGEKPFACTWPG--CGWRFSRSDELSRHRRSHSGVK-PSGPSS   47 (48)
T ss_dssp             CCC-SSCCCCCEECCSSS--CCCEESSHHHHHHHHTTSCCCC-SCSSCC
T ss_pred             CCC-CcCCCCCeECCCCC--CCCccCCHHHHHHHHHHhCCCC-CCCCCC
Confidence            455 58888999997  6  9999999999999999999888 699987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.93  E-value=4.1e-10  Score=67.91  Aligned_cols=42  Identities=24%  Similarity=0.474  Sum_probs=28.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSG-TGEKPFECAECGKSFSISSQLATHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCSEECSSSSCEESSHHHHHHHHH-HHTTSCSSSSC
T ss_pred             CCCCC-CCCCCEECCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            55666 44567777777777777777777765 67777777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.9e-10  Score=67.89  Aligned_cols=34  Identities=26%  Similarity=0.424  Sum_probs=14.8

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      ++|.|++|++.|.....|..|++.+|++++||+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            4444444444444444444443223444444444

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.7e-10  Score=67.62  Aligned_cols=42  Identities=24%  Similarity=0.372  Sum_probs=28.6

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSG-TGEKPYKCNECGKAFRARSSLAIHQA-THSGEKPSGPS   44 (46)
T ss_dssp             CCCCS-CCCCCEECTTSCCEESSHHHHHHHHH-HHCCCSCSCTT
T ss_pred             ccCCC-CCCCCeeccccCChhcCHHHHHHHHH-HcCCCCCCCCC
Confidence            55666 44567777777777777777777765 67777777765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.2e-10  Score=67.44  Aligned_cols=42  Identities=21%  Similarity=0.382  Sum_probs=25.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSG-TGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGPS   44 (46)
T ss_dssp             CCCCC-SSCCSSCCSSSCCCCSSHHHHHHHHG-GGSSSCCCSSS
T ss_pred             cccCC-CCCCCcCCCCCCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            45555 34456666666666666666666655 56666666664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.1e-10  Score=67.13  Aligned_cols=42  Identities=19%  Similarity=0.320  Sum_probs=29.2

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 h~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSG-AGKKLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCSSC-CSSCCCBCTTTCCBCSSHHHHHHHHH-HHTSSCCCSCC
T ss_pred             CCCCC-CCCCCEECCccCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            55666 45567777777777777777777766 67777777775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.8e-10  Score=67.58  Aligned_cols=42  Identities=24%  Similarity=0.364  Sum_probs=23.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSG-TGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCSCBCSSSCCBCSSHHHHHHHHT-TTTTSSCCCCS
T ss_pred             CCcCC-CCCcCeECCCCCcccCCHHHHHHHHH-hhCCCCCCCCC
Confidence            44455 34455666666666666666666654 55555555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.4e-10  Score=68.96  Aligned_cols=40  Identities=20%  Similarity=0.323  Sum_probs=28.4

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|+++++|.|.+  |++.|.....|..|++ .|++++||.|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytg_A            6 SGTGEKPFKCGE--CGKSYNQRVHLTQHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECTT--TCCEESSSHHHHTTGG-GGSSCCSSCSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            567777777755  7777777777777776 477777777765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.6e-10  Score=68.83  Aligned_cols=40  Identities=20%  Similarity=0.234  Sum_probs=21.4

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|+++++|.|+.  |++.|.....|..|++ .|++++||.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em7_A            6 SGTGEKPYKCEE--CGKGFICRRDLYTHHM-VHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSS--SCCEESCHHHHHHHGG-GGTTCCCSSTTC
T ss_pred             CCCCCcCccCCC--ccchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            455555555543  5555555555555555 355555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.2e-10  Score=67.45  Aligned_cols=42  Identities=26%  Similarity=0.360  Sum_probs=28.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSG-TGEKPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-SSCCSEECSSSCCEESSHHHHHHHHH-HHCCCCCCCSC
T ss_pred             CCCCC-CCCcCeECCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            55666 44567777777777777777777765 67777777775

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=5.8e-10  Score=67.22  Aligned_cols=42  Identities=26%  Similarity=0.346  Sum_probs=27.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSG-TGQRPYECIECGKAFKTKSSLICHRR-SHTGEKPSGPS   44 (46)
T ss_dssp             SCCCC-CCSSSEECSSSCCEESSHHHHHHHHH-HHSSSSCCCCC
T ss_pred             Ccccc-CCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            55566 44566777777777777777777765 66677777665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5e-10  Score=67.50  Aligned_cols=42  Identities=26%  Similarity=0.436  Sum_probs=22.6

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSG-TGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCCSS-SSSCSSSCCSSCCCCSSHHHHHHHGG-GGCCCCCCCCC
T ss_pred             ccccc-CCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44444 33455555555555555555555544 55555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3e-10  Score=68.51  Aligned_cols=40  Identities=25%  Similarity=0.360  Sum_probs=22.5

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|+++++|.|.+  |++.|...+.|..|++ .|++++||.|+.
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2en1_A            6 SGSGEKPFKCEE--CGKRFTQNSQLHSHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGG-GGSCCCCSCCCC
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            455555555543  5555555555555555 355555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.7e-10  Score=66.44  Aligned_cols=42  Identities=21%  Similarity=0.346  Sum_probs=29.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSG-SGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGPS   44 (46)
T ss_dssp             CCCSC-CCSCSCCCSSSCCCCSSHHHHHHHHH-HCSSCCSCSTT
T ss_pred             CCCCc-CCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            55666 45577777777777777777777766 67777777775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.3e-10  Score=67.40  Aligned_cols=42  Identities=24%  Similarity=0.375  Sum_probs=23.7

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSG-TGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-SCCCTTCCSSSCCCCSSHHHHHHHHT-TTSCSCCSSTT
T ss_pred             CCcCC-CCCcCeECCCCCcccCChhHHHHHhH-hcCCCCCCCCC
Confidence            44455 34455666666666666666666654 55555565554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.8e-10  Score=66.90  Aligned_cols=42  Identities=24%  Similarity=0.404  Sum_probs=24.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSG-TGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGPS   44 (46)
T ss_dssp             CCCCC-CSCCSCBCTTTCCBCSSHHHHHHHHT-TTSCCCCSCSC
T ss_pred             CCCCC-CCCCCEECCccCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            45555 34456666666666666666666655 56666666664

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=2.8e-10  Score=71.28  Aligned_cols=51  Identities=18%  Similarity=0.221  Sum_probs=46.9

Q ss_pred             CcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCCCC
Q psy1773         305 GKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI  358 (359)
Q Consensus       305 ~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~~  358 (359)
                      ++.|.....|..|+++|++++ +|.|..  |++.|...+.|.+|++.|++++..
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k-~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQ-PATCPI--CYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSC-CEECTT--TCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCC-CccCCC--CCcccCCHHHHHHHHHHhccCCCC
Confidence            578999999999999999999 799999  999999999999999999987653

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.90  E-value=2.9e-10  Score=68.57  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=21.4

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|++++||.|.+  |++.|.+...|..|++ .|++++||.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2em9_A            6 SGTGEKPYNCKE--CGKSFRWASCLLKHQR-VHSGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSS--SCCEESSHHHHHHHGG-GGTSCCCCSTTC
T ss_pred             CCCCCcCeECCc--cccccCChHHHHHHHH-HhCCCCCCCCCC
Confidence            455555555543  5555555555555554 355555555554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.9e-10  Score=66.83  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=34.3

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|+++++|.|+.  |++.|.....|..|+++|++++ +|.|++
T Consensus         6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k-~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEK-SGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCC-CCCSCC
T ss_pred             CCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCC-CCCCCC
Confidence            588888999988  9999999999999999998888 688863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.7e-10  Score=67.62  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=22.7

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSG-TGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCSS-CCCCCEECSSSCCEESSHHHHHHHHT-TTSCCCCCSSC
T ss_pred             cccCc-CCCCCeECCcCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44444 33455555555555555555555544 55555555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6e-10  Score=67.15  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=25.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSG-TGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPS   44 (46)
T ss_dssp             CCCSS-CCCCSEECSSSCCEESSHHHHHHHHH-TSCSSSSSCCC
T ss_pred             CCCCC-CCCCCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            45555 34456666666666666666666655 56666666664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.4e-10  Score=67.04  Aligned_cols=42  Identities=24%  Similarity=0.390  Sum_probs=23.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSG-MGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCSCC-CCCCCCBCSSSCCBCSSHHHHHHHHT-TTSSSCCCCTT
T ss_pred             Ccccc-CCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44555 34455666666666666666666654 55556666554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.8e-10  Score=66.90  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=27.7

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSG-TGEKPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             SSSSS-SCCCSEECTTTCCEESSHHHHHHHHH-HHHSCCCSSST
T ss_pred             CCcCc-CCCcCccCCCCCCCcCCHHHHHHHHH-hcCCCCCCCCC
Confidence            55566 44566777777777777777777765 66666676665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.4e-10  Score=66.30  Aligned_cols=41  Identities=15%  Similarity=0.279  Sum_probs=27.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSG-AGENPFKCSKCDRVFTQRNYLVQHER-THARKSGPSS   43 (44)
T ss_dssp             CSCCC-SCCCSEECSSSSCEESSSHHHHHHHH-HCCCCCSSCC
T ss_pred             Ccccc-CCCCCeECCCCCchhCCHHHHHHHhH-hcCCCCCCCC
Confidence            55565 44566777777777777777777765 6766666666

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.9e-10  Score=66.15  Aligned_cols=41  Identities=20%  Similarity=0.329  Sum_probs=26.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSG-TGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSS   43 (44)
T ss_dssp             CSSCC-SCCCSEECTTTCCEESCHHHHHHHHH-HTTTSSCSCC
T ss_pred             CccCC-CCCCCeECCCCCcccCCHhHHHHHHH-HhCCCCCCCC
Confidence            55555 44566666666666666666666665 6666666666

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.89  E-value=9.4e-11  Score=75.79  Aligned_cols=56  Identities=20%  Similarity=0.378  Sum_probs=34.0

Q ss_pred             HHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcc
Q psy1773         224 KSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRH  286 (359)
Q Consensus       224 ~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H  286 (359)
                      ..|+++| .++++|.|+.|++.|.....|.   + +|++++||.|++  |++.|....++..+
T Consensus         3 ~~h~~~H-~~~k~~~C~~C~k~F~~~~~l~---~-~H~~~k~~~C~~--C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            3 ETDERDS-TNRASFKCPVCSSTFTDLEANQ---L-FDPMTGTFRCTF--CHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCSSSC-CSSSEEECSSSCCEEEHHHHHH---H-EETTTTEEBCSS--SCCBCEECTTCSCC
T ss_pred             hhHHHHc-CCCCCccCCCCCchhccHHHhH---h-hcCCCCCEECCC--CCCccccCcccccc
Confidence            3455666 4456666777776666666554   3 666666666654  66666665554443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.4e-10  Score=67.03  Aligned_cols=43  Identities=23%  Similarity=0.368  Sum_probs=29.8

Q ss_pred             HHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         225 SHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       225 ~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      +|+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         2 ~H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSG-TGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGPS   44 (46)
T ss_dssp             CCCCCC-CSCCCEECSSSCCEESSHHHHHHHHH-HHTCCCBTTTB
T ss_pred             Cccccc-CCCCCEECcccCCccCCHhHHHHHHH-HcCCCCCCCCC
Confidence            356666 44567777777777777777777766 67777777774

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.5e-10  Score=67.00  Aligned_cols=42  Identities=24%  Similarity=0.410  Sum_probs=24.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSG-TGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-CCSCCCCCTTTTCCCSSHHHHHHHHT-TTCCSCCSSCC
T ss_pred             ccccc-CCCCCeECCcCChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            45555 34456666666666666666666654 56666666654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=66.96  Aligned_cols=42  Identities=24%  Similarity=0.453  Sum_probs=20.6

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSG-SGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCSCC-CCSSSBCCSSSCCCBSSHHHHHHHGG-GGTTCCCSSCC
T ss_pred             cccCC-CCCcCCCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            44444 33345555555555555555555544 45555555543

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8e-10  Score=66.58  Aligned_cols=42  Identities=24%  Similarity=0.378  Sum_probs=23.8

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSG-TGERHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGPS   44 (46)
T ss_dssp             CCCSC-SSCCCEECSSSCCEESSHHHHHHHHG-GGCSCCCCSCC
T ss_pred             CCccc-CCCCCCCCCCCCcccCCHHHHHHHHh-HhCCCCCCCCC
Confidence            44555 34455666666666666666666654 55556666554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.5e-10  Score=66.25  Aligned_cols=41  Identities=24%  Similarity=0.395  Sum_probs=23.1

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSG-TGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS   43 (44)
T ss_dssp             SCCCS-SSSSSSCCTTTCCCCSSHHHHHHHHT-TTCCSSSSCC
T ss_pred             CCcCC-CCCcCeECCCCCCccCCHHHHHHHhh-hcCCCCCCCC
Confidence            44555 34455666666666666666666654 5555555555

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.6e-10  Score=67.29  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=19.9

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSG-TGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             CSCCC-CSCCSEECSSSCCEESSHHHHHHHGG-GTSSCCSSCCC
T ss_pred             CCCCC-CCCcCEECCCCChhhCChHHHHHHHH-hcCCCCCcCCC
Confidence            34444 23344555555555555555555543 45445555443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.3e-10  Score=67.07  Aligned_cols=42  Identities=24%  Similarity=0.418  Sum_probs=28.1

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSG-TGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPS   44 (46)
T ss_dssp             SCCCC-SSCCSEEETTTTEEESSHHHHHHHHH-HHSSCCSSSCC
T ss_pred             ccccC-CCCCCeECcccChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            55666 44566777777777777777777765 67777777664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.9e-10  Score=66.62  Aligned_cols=39  Identities=26%  Similarity=0.353  Sum_probs=17.9

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCP  300 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  300 (359)
                      +|++++||.|.+  |++.|.....|..|++ .|++++||.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eon_A            6 SGTGEKPYKCQV--CGKAFRVSSHLVQHHS-VHSGERPSGPS   44 (46)
T ss_dssp             SCSSCCSCBCSS--SCCBCSSHHHHHHHTT-TTTSCCSCTTS
T ss_pred             CCCCCcccCCCC--CCcccCcHHHHHHHHH-hcCCCCCCCCC
Confidence            344444444433  4444444444444444 34444444443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=67.07  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=22.5

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSG-TGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCCEECSSSCCEESSHHHHHHHHT-TTSSCCSSCSC
T ss_pred             CccCC-CCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44444 33455555555555555555555544 55555555554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=3.9e-10  Score=75.76  Aligned_cols=67  Identities=18%  Similarity=0.269  Sum_probs=57.8

Q ss_pred             hHhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         280 KSALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       280 ~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      +..|..|++ .|.+.+||.|+.  |++.| ....|..|+ .|.+++ +|.|+.  |++.|. +..|..|++.+.+.
T Consensus         2 ~~~L~~H~~-~~c~~r~~~C~~--C~~~~-~~~~L~~H~-~~c~~~-~~~C~~--C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            2 SSGSSGHEE-TECPLRLAVCQH--CDLEL-SILKLKEHE-DYCGAR-TELCGN--CGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCSCCCC-CCCCCCCEECSS--SCCEE-CHHHHHHHH-HHHHHC-EEECSS--SCCEEE-TTGGGTHHHHBTTB
T ss_pred             chHHHhhCc-ccCCCcccCCcc--cChHh-hHHHHHHHH-hHcCCC-ceEccc--CCCcCc-HHHHHHHHHHccCC
Confidence            356888987 699999999998  99999 499999999 899988 799998  999877 68999999887654

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=1.2e-09  Score=64.34  Aligned_cols=41  Identities=17%  Similarity=0.265  Sum_probs=25.6

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|
T Consensus         2 H~~~H-~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSS-GGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPSSG   42 (42)
T ss_dssp             CCSCC-CSSCCEECSSSCCEESSHHHHHHHHH-HTTCCCCCCC
T ss_pred             CCccC-CCCCCeECCCCCcccCCHHHHHHHhh-hcCCCCCCCC
Confidence            34455 44466666666666666666666655 6666666665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.5e-10  Score=65.76  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=21.2

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|+++++|+|
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSG-TGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS   43 (44)
T ss_dssp             SCCSS-SSCCSCEETTTTEECSSHHHHHHHHT-TSSSSCSCCC
T ss_pred             Ccccc-CCCcCeeCCCCCCccCCHHHHHHHHH-HcCCCCCCCC
Confidence            44444 33355555555555555555555544 4555555554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8e-10  Score=66.59  Aligned_cols=42  Identities=21%  Similarity=0.404  Sum_probs=28.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|+++++|.|+
T Consensus         3 h~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSG-SGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGPS   44 (46)
T ss_dssp             CCSCS-SCCCSCCCSSSCCCCSSHHHHHHHHH-HHHHTTCCCSC
T ss_pred             CCcCC-CCCCCeECCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            55666 45567777777777777777777765 67777777664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.1e-09  Score=64.14  Aligned_cols=38  Identities=26%  Similarity=0.413  Sum_probs=29.8

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      .|++++||.|+.  |++.|.....|..|+++|++++ ||.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSG-PSSG   41 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCS-CSCC
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCC-CcCC
Confidence            577778888877  8888888888888888888777 5776

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=9.9e-10  Score=64.71  Aligned_cols=38  Identities=21%  Similarity=0.303  Sum_probs=18.6

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPC  299 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  299 (359)
                      +|++++||+|..  |++.|...+.|..|++ .|++++||.|
T Consensus         5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEI--CGTRFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             ccCCCCCEECCC--CCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            344455555543  5555555555555544 3445555544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.8e-10  Score=66.17  Aligned_cols=42  Identities=26%  Similarity=0.422  Sum_probs=24.1

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||+|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSG-TGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGPS   44 (46)
T ss_dssp             CCCSS-CCCCSSEETTTTEECSSHHHHHHHHT-TSCCCCCCCSC
T ss_pred             cccCC-CCCCCeECCCCChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44555 34455666666666666666666654 56666666554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.9e-10  Score=64.91  Aligned_cols=41  Identities=20%  Similarity=0.367  Sum_probs=22.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|..|++.|.....|..|++ +|++++||.|
T Consensus         2 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSS-GGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGPSSG   42 (42)
T ss_dssp             CCCCC-CSSCSEECTTTCCEESSHHHHHHHTH-HHHSCCSSCC
T ss_pred             CCccc-CCCCCEeCCCcChhhCCHHHHHHHHH-HcCCCCCCCC
Confidence            34444 34455555555555555555555554 5555555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=9.3e-10  Score=65.59  Aligned_cols=33  Identities=21%  Similarity=0.415  Sum_probs=15.4

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      ++|.|.+|++.|.....|..|++ +|++++||+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQK-THAAKSGPSS   43 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHGG-GGCCCCCTTC
T ss_pred             CCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCC
Confidence            44444444444444444444443 4444444444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.3e-09  Score=63.86  Aligned_cols=41  Identities=22%  Similarity=0.355  Sum_probs=27.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||+|
T Consensus         3 h~~~h-~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSG-AAKTTSECQECGKIFRHSSLLIEHQA-LHAGESGPSS   43 (44)
T ss_dssp             CSCSC-SSSCCCCCTTTCCCCSSHHHHHHHHH-HHTTSCCCCC
T ss_pred             CCCCC-CCCcCeECCCCCcccCCHHHHHHHHH-HHCCCCCCCC
Confidence            44555 44566777777777777777777765 6777777766

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=2.4e-09  Score=65.13  Aligned_cols=42  Identities=19%  Similarity=0.367  Sum_probs=26.3

Q ss_pred             ccCCCccccccCCcCccccChHhhhccccccccCCcccCCCCCCcCc
Q psy1773         260 HESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGK  306 (359)
Q Consensus       260 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~  306 (359)
                      |.++++|.|.+  |++.|.....|..|++ .|++++||.|++  |++
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            7 GRTRKQVACEI--CGKIFRDVYHLNRHKL-SHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCSEEETT--TTEEESSHHHHHHHGG-GSCSCCCCCSCC--CCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHH-hcCCCCCccCCC--CCC
Confidence            45566666654  6666666666666666 466666666666  654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=3.7e-09  Score=67.51  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=34.6

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHH-HhhcCCCCceeccC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHM-LQHNENKPKFTCPY  332 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~~C~~  332 (359)
                      .+++++||+|....|+++|...+.|..|+ ++|++++ ||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEK-P~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDL-PAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC-CCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCC-Cccccc
Confidence            36889999997555999999999999997 6899998 688854

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.5e-10  Score=66.46  Aligned_cols=42  Identities=29%  Similarity=0.499  Sum_probs=27.3

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++++||.|+
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSG-TGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGPS   44 (46)
T ss_dssp             CCCCS-CCCCSEECSSSCCEESSSHHHHHHHH-HHHHSCCSSCS
T ss_pred             ccccc-CCCCCeeCcccChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            55565 44566777777777777677777765 66666666664

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.4e-09  Score=65.44  Aligned_cols=41  Identities=20%  Similarity=0.339  Sum_probs=19.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccC-CCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHES-TKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-~~~~~C  268 (359)
                      |+++| .++++|.|.+|++.|.....|..|++ +|++ ++||.|
T Consensus         3 H~~~H-~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSG-QKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPS   44 (46)
T ss_dssp             CCCCC-CCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSS
T ss_pred             Ccccc-CCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCC
Confidence            33444 33344555555555555555555543 4444 445444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.7e-09  Score=65.12  Aligned_cols=34  Identities=26%  Similarity=0.416  Sum_probs=16.6

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      +++|.|.+|++.|.....|..|++ +|++++||+|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGP   43 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHHHHGG-GSCCSCCCCC
T ss_pred             CCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            344555555555555555555543 4444444444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.2e-09  Score=64.25  Aligned_cols=38  Identities=24%  Similarity=0.345  Sum_probs=24.9

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPC  299 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  299 (359)
                      +|++++||.|+.  |++.|...+.|..|++ .|++++||.|
T Consensus         5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQ--CGKAFSQKGSLIVHIR-VHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTT--TTCCBSSHHHHHTTGG-GTSCCSCCCC
T ss_pred             ccCCCCCeeCCC--ccchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            566666666654  6666666666666666 4666666665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.8e-10  Score=65.47  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=19.6

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|++|++.|.....|..|++ +|++++||.|
T Consensus         3 H~~~H-~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSG-TDSKSYNCNECGKAFTRIFHLTRHQK-IHTRKSGPSS   43 (44)
T ss_dssp             CCCCC-CCCCCEEETTTTEEESSSHHHHTTHH-HHCCCCCCSC
T ss_pred             CCcCC-CCCCCeECcccCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            34444 33344555555555555555555544 4445555444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=1.9e-09  Score=64.57  Aligned_cols=37  Identities=22%  Similarity=0.383  Sum_probs=19.7

Q ss_pred             CCCccccCCcCccCCChHHHHHHHHHHccCCCcccccc
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTY  270 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  270 (359)
                      ++++|.|.+|++.|.....|..|++ +|+++++|.|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~   43 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKSGPS   43 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHH-HHSCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHH-HccCCCCCCCcC
Confidence            3455555555555555555555544 455555555543

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.6e-09  Score=63.62  Aligned_cols=40  Identities=23%  Similarity=0.313  Sum_probs=21.9

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|+++++|.|.+  |++.|.....|..|++ .|++++||.|++
T Consensus         6 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ep0_A            6 SGTGEKPYKCDV--CHKSFRYGSSLTVHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSTTCCSEECSS--SCCEESSHHHHHHHHT-TTSSSCCCSCCC
T ss_pred             CCCCCCCeeCcc--cCcccCChHHHHHHHH-HhCCCCCCCCCC
Confidence            455555555543  5555555555555555 355555555554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=5.4e-09  Score=62.84  Aligned_cols=40  Identities=20%  Similarity=0.355  Sum_probs=25.0

Q ss_pred             hhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         228 RVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       228 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      ++| .++++|.|.+|++.|.....|..|++ +|++++||+|.
T Consensus         5 ~~h-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSG-HGERGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCSSCCCSSSCCCCSSHHHHHHHHH-HHSSCCCSSCC
T ss_pred             CCC-CCCCCcCCCCCCCeeCChHHHHHHHH-HhCCCCCCCCC
Confidence            344 34466666666666666666666655 56666666664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=64.37  Aligned_cols=40  Identities=23%  Similarity=0.274  Sum_probs=19.2

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|+++++|.|.+  |++.|.....|..|++ .|++++||.|++
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytt_A            6 SGEGEKPYQCSE--CGKSFSGSYRLTQHWI-THTREKPSGPSS   45 (46)
T ss_dssp             SCSCCCTTCCSS--SCCCCSSHHHHHHHHT-HHHHCCCCSCCC
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            344444555543  5555555555555544 344444555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.2e-09  Score=62.66  Aligned_cols=41  Identities=20%  Similarity=0.306  Sum_probs=21.4

Q ss_pred             HhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         226 HQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       226 H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      |+++| .++++|.|.+|++.|...+.|..|++ +|++++||.|
T Consensus         3 H~~~H-~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSG-SGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS   43 (44)
T ss_dssp             CCCCC-CCCCSEECSSSCCEESSHHHHHHHHG-GGSSCSCCCC
T ss_pred             CCccc-CCCcCeECCCCCcccCchHHHHHHHh-HhcCCCCCCC
Confidence            44444 33455555555555555555555544 5555555544

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.73  E-value=9.2e-09  Score=60.80  Aligned_cols=36  Identities=19%  Similarity=0.345  Sum_probs=20.9

Q ss_pred             CCCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      ++++|.|..|++.|.....|..|++ +|++++||+|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   42 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTL-QTHSDKSGPSS   42 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHH-HHTCTTCSSSC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHH-hhCCCCCccCC
Confidence            3455666666666666666666654 55566666553

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.71  E-value=6.5e-09  Score=60.00  Aligned_cols=37  Identities=22%  Similarity=0.451  Sum_probs=28.4

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceec
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC  330 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  330 (359)
                      |++++||.|+.  |++.|...+.|..|+++|++++ +|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k-~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDR-ARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSC-TTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCc-ccee
Confidence            56677888887  8888888888888888888877 5755

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=4.6e-10  Score=77.82  Aligned_cols=56  Identities=18%  Similarity=0.287  Sum_probs=44.9

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      .|++++||.|+.  |++.|.....|..|+++|++++ ||.|..  |.    .+..|..|.+.|.+
T Consensus        19 ~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ek-p~~C~~--~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEF-QKRAKR--QE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHH-HHHCCC--CS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCC-Ccccch--hh----hHHHHHhhhccccc
Confidence            488899999998  9999999999999999999988 799977  54    44556666666554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=1.5e-08  Score=57.58  Aligned_cols=36  Identities=33%  Similarity=0.612  Sum_probs=24.5

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |++ .|++++||.|+.  |++.|.....|..|+++|+++
T Consensus         2 H~~-~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STR-GSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSS-TTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCC-cCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            555 466777777776  777777777777777776653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.2e-08  Score=58.14  Aligned_cols=34  Identities=24%  Similarity=0.294  Sum_probs=19.5

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +++++||+|+...|+++|.+.+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4555666665223666666666666666666553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=9.3e-09  Score=60.04  Aligned_cols=38  Identities=18%  Similarity=0.315  Sum_probs=24.2

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPC  299 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  299 (359)
                      +|++++||+|+.  |++.|.....|..|++ .|++++||.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHER-IHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGG-GCCCCSCSCC
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHH-HhCCCCCcCC
Confidence            466666666654  6666666666666666 4666666665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.7e-09  Score=61.58  Aligned_cols=39  Identities=28%  Similarity=0.461  Sum_probs=20.2

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCP  300 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  300 (359)
                      +|+++++|+|.+  |++.|.....|..|++ .|++++||.|+
T Consensus         6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTH--CGKSFRAKGNLVTHQR-IHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETT--TTEEESSHHHHHHHHT-TTSSCCCCCSC
T ss_pred             CCCCCcCccCCC--CCCccCChHHHHHHHH-HhCCCCCCCCC
Confidence            345555555543  5555555555555554 35555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.1e-08  Score=62.05  Aligned_cols=42  Identities=29%  Similarity=0.498  Sum_probs=21.2

Q ss_pred             HccCCCccccccCCcCccccChHhhhccccccccCCcccCCCC
Q psy1773         259 VHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMFPCPL  301 (359)
Q Consensus       259 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  301 (359)
                      +|+++++|+|.++.|++.|.....|..|++ .|++++||.|..
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   47 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPSS   47 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCCCCSCSSCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            445555555531125555555555555555 355555555554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.8e-08  Score=57.26  Aligned_cols=34  Identities=24%  Similarity=0.551  Sum_probs=24.2

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      .|++++||.|+.  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            466777777776  7777777777777777777665

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.63  E-value=9.4e-09  Score=58.47  Aligned_cols=36  Identities=25%  Similarity=0.310  Sum_probs=33.3

Q ss_pred             HHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         317 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       317 H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      |+++|++++ ||.|+.  |++.|.....|.+|++.|+++
T Consensus         2 H~~~h~~~k-~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIK-PFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSS-SBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCC-CccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            678999999 799999  999999999999999999874

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=4.5e-08  Score=62.56  Aligned_cols=38  Identities=26%  Similarity=0.340  Sum_probs=24.3

Q ss_pred             CCCCccccCC--cCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         232 TNPEDLVCKG--CGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       232 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      .+++||.|..  |+++|...+.|..|++.+|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3456666654  7777776666777764466666666664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.61  E-value=2.7e-08  Score=55.65  Aligned_cols=33  Identities=24%  Similarity=0.431  Sum_probs=20.9

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      |+++++|.|+.  |++.|...+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            55566666666  6666666666666666666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=6.3e-09  Score=72.05  Aligned_cols=58  Identities=14%  Similarity=0.249  Sum_probs=46.2

Q ss_pred             hhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhccccccccC
Q psy1773         227 QRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNKSKHLN  293 (359)
Q Consensus       227 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~H~~  293 (359)
                      .++| .++++|.|.+|++.|.....|..|++ +|++++||+|..  |.    ....|..|.+ .|.+
T Consensus        17 ~~~H-~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~--~~----~~~~~~~~~~-~~~~   74 (88)
T 1x6f_A           17 NGPR-LQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQKRAKR--QE----RRKQLLSKQK-YADG   74 (88)
T ss_dssp             CCSC-CCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHHHHCCC--CS----CCCCCCCCCC-CCCC
T ss_pred             cccc-CCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCcccch--hh----hHHHHHhhhc-cccc
Confidence            4456 56689999999999999999999987 899999999863  54    5667788877 4655

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.59  E-value=3.3e-08  Score=55.32  Aligned_cols=33  Identities=21%  Similarity=0.447  Sum_probs=21.5

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      |++++||.|+.  |++.|.....|..|+++|++++
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCC
Confidence            55666666666  6666666666666666666654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3.7e-08  Score=56.05  Aligned_cols=36  Identities=28%  Similarity=0.361  Sum_probs=30.9

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .+++++ ||.|+..+|+++|..++.|.+|+++|++++
T Consensus         3 ~~~gek-p~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGI-LLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCC-CEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCC-CCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367788 799975569999999999999999998863

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.56  E-value=5.5e-08  Score=53.65  Aligned_cols=32  Identities=38%  Similarity=0.696  Sum_probs=26.9

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCCCcee
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFT  329 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~  329 (359)
                      +||.|+.  |++.|...+.|..|+++|++++ +|.
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~-~~~   32 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLG-EER   32 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTC-CCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCC-CCC
Confidence            4788888  9999999999999998888888 564

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=9e-10  Score=73.96  Aligned_cols=59  Identities=20%  Similarity=0.299  Sum_probs=29.7

Q ss_pred             HHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccc
Q psy1773         223 LKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNK  288 (359)
Q Consensus       223 l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~  288 (359)
                      |..|++++ .+.+++.|..|++.|. ...|..|+  .|.+++|+.|+.  |++.|. ...|..|++
T Consensus         5 L~~H~~~~-c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~--C~~~~~-~~~l~~H~~   63 (75)
T 2d9k_A            5 SSGHEETE-CPLRLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGN--CGRNVL-VKDLKTHPE   63 (75)
T ss_dssp             CSCCCCCC-CCCCCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSS--SCCEEE-TTGGGTHHH
T ss_pred             HHhhCccc-CCCcccCCcccChHhh-HHHHHHHH--hHcCCCceEccc--CCCcCc-HHHHHHHHH
Confidence            34444444 3335555555555553 55555553  345555555543  555544 255555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=3.8e-08  Score=56.24  Aligned_cols=37  Identities=30%  Similarity=0.561  Sum_probs=24.8

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCce
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF  328 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  328 (359)
                      |++++||.|.+..|++.|...+.|..|+++|++++ +|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k-~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL-KF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT-TT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC-CC
Confidence            45667777772227777777777777777777766 44

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.52  E-value=2.4e-07  Score=59.53  Aligned_cols=57  Identities=23%  Similarity=0.430  Sum_probs=44.7

Q ss_pred             cCCCCCCcCcccCChHHHHHHH-HhhcCCC-----CceeccCCCccccccchhhHHHHHhhhc
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHM-LQHNENK-----PKFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~-----~~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      |.|.+..|++.|.+...|..|+ +.|.+.+     ++|.|...+|+..+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            5677777888888888888887 4676554     2688887788888888888888888776

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=1.2e-07  Score=53.37  Aligned_cols=34  Identities=26%  Similarity=0.517  Sum_probs=25.3

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      .|+++++|.|+.  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            466777777777  7777777777777777777653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=4.1e-08  Score=55.74  Aligned_cols=35  Identities=20%  Similarity=0.504  Sum_probs=32.1

Q ss_pred             HhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         319 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       319 ~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ++|++++ +|.|..  |+++|...+.|.+|++.|++++
T Consensus         2 ~~h~~~k-~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGR-SYSCPV--CEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCC-CCEETT--TTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCC-CcCCCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            5788988 799999  9999999999999999999865

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=9e-08  Score=53.84  Aligned_cols=32  Identities=19%  Similarity=0.412  Sum_probs=19.8

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |++++||.|+.  |++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            55566666665  666666666666666666554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1e-07  Score=53.65  Aligned_cols=32  Identities=25%  Similarity=0.471  Sum_probs=19.6

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |++++||.|+.  |++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            55566666665  666666666666666666554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=9e-08  Score=53.88  Aligned_cols=32  Identities=22%  Similarity=0.526  Sum_probs=18.5

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |++++||.|+.  |++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            45555566655  666666666666666555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1e-07  Score=54.07  Aligned_cols=32  Identities=28%  Similarity=0.594  Sum_probs=18.2

Q ss_pred             ccCCcccCCCCCCcCcccCCh-HHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRS-EHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~h~~~  324 (359)
                      |++++||.|+.  |++.|... +.|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            55555555555  55555555 5555555555543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.43  E-value=9.2e-08  Score=54.98  Aligned_cols=35  Identities=23%  Similarity=0.459  Sum_probs=19.3

Q ss_pred             CCCccccCCcCccCCChHHHHHHHHHHccCCCcccc
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKC  268 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  268 (359)
                      ++++|.|.+|++.|...+.|..|++ +|++++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMN-VHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHH-TTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHH-HcCCCcccee
Confidence            3455555555555555555555554 5555555543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.42  E-value=1.5e-07  Score=52.54  Aligned_cols=34  Identities=24%  Similarity=0.617  Sum_probs=30.7

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      +|++++ +|.|..  |++.|...+.|.+|++.|++++
T Consensus         1 ~h~~~k-~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSS-GYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCC-SEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCC-CeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            477888 799999  9999999999999999998875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.42  E-value=2.1e-07  Score=51.21  Aligned_cols=31  Identities=26%  Similarity=0.492  Sum_probs=21.5

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCCCccc
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHESTKNFK  267 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  267 (359)
                      ||.|++|++.|...+.|..|++ +|+++++|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHIT-LHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH-HHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHH-HhCCCCCCC
Confidence            5677777777777777777765 677776654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=5.9e-08  Score=58.46  Aligned_cols=41  Identities=24%  Similarity=0.492  Sum_probs=26.8

Q ss_pred             hccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         284 KRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       284 ~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      ..|.. .|++++||.|++..|++.|...+.|..|+++|++++
T Consensus         7 ~~~~~-~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHh-ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            33443 477777777742127777777777777777777653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.4e-07  Score=53.50  Aligned_cols=31  Identities=19%  Similarity=0.446  Sum_probs=16.2

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHH-HHhhcC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEH-MLQHNE  323 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~  323 (359)
                      |++++||.|+.  |++.|.....|..| +++|++
T Consensus         4 H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            45555555554  55555555555555 455543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.9e-07  Score=52.53  Aligned_cols=32  Identities=28%  Similarity=0.553  Sum_probs=18.9

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |.+++||.|+.  |++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            45555666655  666666666666666666554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.38  E-value=2.1e-07  Score=51.88  Aligned_cols=34  Identities=26%  Similarity=0.485  Sum_probs=30.6

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      +|++++ +|.|..  |++.|...+.|.+|++.|+++.
T Consensus         1 ~H~~~k-~~~C~~--C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKR-PFVCRI--CLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCS-CEECSS--SCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCc-CeeCCC--CCcccCCHHHHHHHHHHcCCCC
Confidence            477888 799999  9999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.3e-07  Score=53.64  Aligned_cols=35  Identities=17%  Similarity=0.330  Sum_probs=30.7

Q ss_pred             HHhhcCCCCceeccCCCccccccchhhHHHH-HhhhcCC
Q psy1773         318 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAH-LKHVHST  355 (359)
Q Consensus       318 ~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~hh~~  355 (359)
                      +++|++++ ||.|+.  |+++|...+.|.+| ++.|++.
T Consensus         1 ~~~H~~~k-~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGH-LYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSC-EEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCc-CeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            35788988 799999  99999999999999 8877764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.36  E-value=3e-07  Score=59.05  Aligned_cols=57  Identities=19%  Similarity=0.339  Sum_probs=41.1

Q ss_pred             cccccCCcCccccChHhhhccccccccCCc------ccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         266 FKCTYDGCKLLFSTKSALKRHNKSKHLNMR------MFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       266 ~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      +.|...+|++.|.+...|..|+...|.+.+      +|.|.+.+|++.+.....|..|+++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            456666677777777777777754566544      688877778888888888888887653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.35  E-value=2.1e-07  Score=52.68  Aligned_cols=34  Identities=24%  Similarity=0.500  Sum_probs=20.5

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |++++||.|.+..|++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5566666665222666666666666666666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=4.6e-08  Score=58.96  Aligned_cols=41  Identities=12%  Similarity=0.426  Sum_probs=33.9

Q ss_pred             HHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         315 QEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       315 ~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ..|...|++++ ||.|.+++|+++|...+.|.+|++.|++++
T Consensus         7 ~~~~~~H~~~k-~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDK-TFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTT-EEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCC-CeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34556799998 799963339999999999999999998763

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=2.2e-07  Score=52.55  Aligned_cols=35  Identities=20%  Similarity=0.495  Sum_probs=31.2

Q ss_pred             HhhcCCCCceeccCCCccccccch-hhHHHHHhhhcCCC
Q psy1773         319 LQHNENKPKFTCPYQDCLMSYVAK-SSLYAHLKHVHSTN  356 (359)
Q Consensus       319 ~~h~~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~hh~~~  356 (359)
                      ++|++++ +|.|+.  |++.|... +.|.+|++.|++++
T Consensus         2 ~~h~~~k-~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGR-AMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCC-CEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCC-CeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            4688888 799999  99999999 99999999998763

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.5e-07  Score=51.31  Aligned_cols=34  Identities=24%  Similarity=0.522  Sum_probs=30.6

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      +|++++ +|.|..  |++.|.....|.+|++.|++++
T Consensus         3 ~h~~~k-~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGK-PYKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCC-SEECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCC-CCCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            578888 799999  9999999999999999998763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=3e-07  Score=51.65  Aligned_cols=34  Identities=26%  Similarity=0.486  Sum_probs=30.5

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      +|++++ ||.|..  |++.|...+.|.+|++.|++++
T Consensus         3 ~h~~~k-~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGK-PFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCC-SEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCC-CccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            578888 799999  9999999999999999988753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.7e-07  Score=51.80  Aligned_cols=33  Identities=9%  Similarity=0.174  Sum_probs=30.0

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      .|++++ ||.|..  |++.|...+.|.+|++.|+++
T Consensus         3 ~h~~~k-~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGL-LYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCC-CEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCC-CeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            578888 799999  999999999999999998875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.32  E-value=2.4e-07  Score=56.02  Aligned_cols=34  Identities=21%  Similarity=0.454  Sum_probs=25.3

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHH-hhcCCCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKP  326 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~  326 (359)
                      |++++||.|.+  |++.|.....|..|++ +|+++..
T Consensus         2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCCC
Confidence            67788888887  8888888888888888 7877653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=7.5e-07  Score=57.45  Aligned_cols=39  Identities=31%  Similarity=0.623  Sum_probs=33.1

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY  332 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  332 (359)
                      .|.+++||.|..  |++.|.....|..|+++|+++.  ..+.+
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~--~~~~~   45 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS--LQLGY   45 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS--CCCCS
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc--ccccc
Confidence            477889999998  9999999999999999999875  44555

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.30  E-value=2.5e-07  Score=51.74  Aligned_cols=26  Identities=31%  Similarity=0.545  Sum_probs=18.3

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHH
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      +.+++||.|+.  |+++|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC
Confidence            45667777776  777777777777776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.29  E-value=5e-07  Score=51.10  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=30.6

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .|++++ +|.|.+++|++.|...+.|.+|++.|++++
T Consensus         2 ~~~~~k-~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKK-QHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCC-CEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCC-CCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367888 799984449999999999999999998763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=6.5e-07  Score=48.66  Aligned_cols=28  Identities=36%  Similarity=0.733  Sum_probs=16.2

Q ss_pred             cccCCC--CCCcCcccCChHHHHHHHHhhcCC
Q psy1773         295 RMFPCP--LVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       295 ~~~~C~--~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +||.|+  .  |++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPG--CDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTT--CCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCC--CCCccCCHHHHHHHHHHccCC
Confidence            455565  4  666666666666666665554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.28  E-value=5.9e-07  Score=48.42  Aligned_cols=29  Identities=41%  Similarity=0.725  Sum_probs=16.0

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      ||.|++..|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            55565111666666666666666666554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=5.9e-07  Score=50.34  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=30.4

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .|++++ +|.|.+  |++.|.....|.+|++.|++++
T Consensus         3 ~h~~~~-~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGK-THLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCS-SCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCC-CeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            467788 799999  9999999999999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.25  E-value=9.3e-07  Score=46.66  Aligned_cols=27  Identities=37%  Similarity=0.853  Sum_probs=16.2

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      ||.|+.  |++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            456655  666666666666666666554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.23  E-value=5e-07  Score=54.54  Aligned_cols=34  Identities=18%  Similarity=0.400  Sum_probs=28.8

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHh-hhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~hh~~~  356 (359)
                      +|++++ +|.|.+  |++.|.....|.+|++ .|.+++
T Consensus         1 ~Ht~~k-p~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDK-PYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTS-CEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCc-CEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            578888 799999  9999999999999999 777664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=8.7e-07  Score=49.66  Aligned_cols=34  Identities=35%  Similarity=0.555  Sum_probs=30.1

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .|.+++ +|.|+.  |++.|.....|..|++.|++++
T Consensus         3 ~~~~~k-~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGK-IFTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCC-CEECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCC-CEECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            467777 799999  9999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=7.4e-07  Score=47.44  Aligned_cols=27  Identities=26%  Similarity=0.680  Sum_probs=13.2

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      +||.|..  |++.|.....|..|+++|++
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHHhcc
Confidence            3444544  55555555555555554444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.20  E-value=5.9e-08  Score=53.08  Aligned_cols=30  Identities=27%  Similarity=0.482  Sum_probs=14.6

Q ss_pred             ccccccCCcCccccChHhhhccccccccCCccc
Q psy1773         265 NFKCTYDGCKLLFSTKSALKRHNKSKHLNMRMF  297 (359)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~~H~~~~~~  297 (359)
                      ||+|..  |++.|...+.|..|++ .|++++||
T Consensus         2 p~~C~~--C~k~f~~~~~L~~H~~-~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPA--CPKRFMRSDALSKHIK-TAFIVVAL   31 (32)
T ss_dssp             CSSSSS--SCTTHHHHHTTSSSTT-SSSSSSSC
T ss_pred             CCCCCC--CCcccCCHHHHHHHHH-HHccCCCC
Confidence            445543  5555555555555554 35544443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.20  E-value=7e-07  Score=47.18  Aligned_cols=25  Identities=24%  Similarity=0.575  Sum_probs=11.7

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |.|+.  |++.|...+.|..|++.|++
T Consensus         3 ~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            3 FACPE--CPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             EECSS--SSCEESCSHHHHHHHTGGGS
T ss_pred             ccCCC--CCchhCCHHHHHHHHHHhcC
Confidence            44444  44444444444444444443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.17  E-value=1.7e-06  Score=45.96  Aligned_cols=28  Identities=18%  Similarity=0.452  Sum_probs=16.2

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +|.|+.  |++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            455655  6666666666666666555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=1.3e-06  Score=46.02  Aligned_cols=27  Identities=30%  Similarity=0.618  Sum_probs=14.5

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      ||.|+.  |++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            455555  555555555555555555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.14  E-value=1.6e-06  Score=49.22  Aligned_cols=37  Identities=22%  Similarity=0.380  Sum_probs=31.3

Q ss_pred             hcCCCCceeccCCCccccccchhhHHHHHhhhcCCCCC
Q psy1773         321 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI  358 (359)
Q Consensus       321 h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~~  358 (359)
                      |++++ +|.|.+++|+++|...+.|.+|++.|++++..
T Consensus         1 H~~~k-~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDK-PFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCC-CEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCc-ceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            56778 79999334999999999999999999987653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=1.1e-06  Score=46.37  Aligned_cols=27  Identities=33%  Similarity=0.667  Sum_probs=13.5

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      ||.|+.  |++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            444544  555555555555555555443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.1e-06  Score=46.06  Aligned_cols=24  Identities=29%  Similarity=0.761  Sum_probs=10.9

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      ||.|+.  |++.|.....|..|+++|
T Consensus         3 ~~~C~~--C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            3 PYSCSV--CGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             SEECSS--SCCEESCHHHHHHHHTTS
T ss_pred             CccCCC--CCcccCCHHHHHHHHHhc
Confidence            344444  444444444444444444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.12  E-value=1.3e-06  Score=48.72  Aligned_cols=24  Identities=33%  Similarity=0.800  Sum_probs=13.2

Q ss_pred             CCCccccCCcCccCCChHHHHHHH
Q psy1773         233 NPEDLVCKGCGKQFKVPCRLREHY  256 (359)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~  256 (359)
                      +++||.|+.|+++|...+.|.+|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            345555555555555555555553

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.11  E-value=1.7e-06  Score=44.79  Aligned_cols=25  Identities=32%  Similarity=0.751  Sum_probs=12.5

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      |.|+.  |++.|.....|..|+++|++
T Consensus         2 ~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            44544  55555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=1.4e-06  Score=45.21  Aligned_cols=23  Identities=26%  Similarity=0.509  Sum_probs=10.6

Q ss_pred             eeccCCCccccccchhhHHHHHhhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      |.|+.  ||+.|...+.|..|++.|
T Consensus         4 ~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            4 FSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             EECSS--SSCEESSHHHHHHHHHHC
T ss_pred             ccCCC--cChhhCCHHHHHHHHHHc
Confidence            44444  444444444444444433

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.3e-07  Score=48.10  Aligned_cols=26  Identities=35%  Similarity=0.714  Sum_probs=12.4

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ||.|+.  |++.|...+.|..|+++|++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVM--CGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            344444  44444444444444444443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=1e-06  Score=45.72  Aligned_cols=24  Identities=25%  Similarity=0.611  Sum_probs=12.1

Q ss_pred             ceeccCCCccccccchhhHHHHHhhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ||.|+.  ||++|...+.|.+|++.|
T Consensus         3 ~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             CcCCCC--CCcccCCHHHHHHHHHhc
Confidence            355554  555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.5e-07  Score=48.04  Aligned_cols=26  Identities=27%  Similarity=0.538  Sum_probs=12.6

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ||.|+.  |++.|.....|..|+++|++
T Consensus         3 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIH--CQRQFADPGALQRHVRIHTG   28 (30)
Confidence            444444  55555444444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.02  E-value=3.8e-06  Score=45.45  Aligned_cols=30  Identities=20%  Similarity=0.440  Sum_probs=25.7

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|..++|++.|...+.|..|++.|++++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            799982229999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=3.7e-06  Score=44.53  Aligned_cols=28  Identities=25%  Similarity=0.552  Sum_probs=25.8

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|..  |++.|.....|..|++.|++++
T Consensus         3 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            3 PYQCDY--CGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CEECTT--TCCEESCHHHHHHHHHTTCCCC
T ss_pred             CccCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            799999  9999999999999999988763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.00  E-value=1.4e-06  Score=47.40  Aligned_cols=31  Identities=32%  Similarity=0.614  Sum_probs=24.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCCCce
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF  328 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  328 (359)
                      +||.|+.  |++.|...+.|..|+++|++++ ||
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~k-p~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVV-AL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSS-SC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCC-CC
Confidence            4688887  8888888888888888888877 45

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.00  E-value=3.2e-06  Score=43.64  Aligned_cols=27  Identities=30%  Similarity=0.508  Sum_probs=23.8

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|..  |++.|...+.|.+|++.|+++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCCC
Confidence            589999  999999999999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.97  E-value=3.6e-06  Score=44.67  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=13.1

Q ss_pred             ccCCCCCCcCcccCChHHHHHH-HHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEH-MLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H-~~~h~~  323 (359)
                      ||.|+.  |++.|.+.+.|..| +++|++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGL--CNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTT--TCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcc--cCcccCChHHHHHHHHHHccC
Confidence            455554  55555555555555 344444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.96  E-value=4.1e-06  Score=43.69  Aligned_cols=26  Identities=15%  Similarity=0.436  Sum_probs=24.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      +|.|+.  |++.|...+.|..|++.|++
T Consensus         3 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            3 PYSCSV--CGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             SEECSS--SCCEESCHHHHHHHHTTSCC
T ss_pred             CccCCC--CCcccCCHHHHHHHHHhcCC
Confidence            799999  99999999999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.96  E-value=4.4e-06  Score=44.83  Aligned_cols=30  Identities=17%  Similarity=0.407  Sum_probs=25.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|+...||++|...+.|..|++.|++++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            699982229999999999999999998763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.95  E-value=5e-06  Score=43.71  Aligned_cols=29  Identities=48%  Similarity=0.949  Sum_probs=26.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +||.|+.  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCCC
Confidence            5799998  9999999999999999999864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.95  E-value=5.1e-06  Score=43.98  Aligned_cols=29  Identities=34%  Similarity=0.694  Sum_probs=26.7

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      +|.|..  |++.|...+.|..|++.|+++++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQY--CEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCC--CCCccCCHHHHHHHHHHHccCCC
Confidence            699999  99999999999999999998753

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.95  E-value=5.4e-06  Score=43.52  Aligned_cols=28  Identities=18%  Similarity=0.498  Sum_probs=25.7

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|+.  |++.|...+.|..|++.|++++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCC--CCcccCCHHHHHHHHHHhcCCC
Confidence            699999  9999999999999999998753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=3.9e-06  Score=43.42  Aligned_cols=27  Identities=30%  Similarity=0.593  Sum_probs=24.8

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      ++||.|+.  |++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhcC
Confidence            46899998  9999999999999999885

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=5.1e-06  Score=42.90  Aligned_cols=27  Identities=22%  Similarity=0.508  Sum_probs=24.9

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      ++||.|+.  |++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHHHcc
Confidence            46899998  9999999999999999985

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.93  E-value=6.3e-06  Score=53.06  Aligned_cols=33  Identities=18%  Similarity=0.257  Sum_probs=29.7

Q ss_pred             hcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         321 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       321 h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      +.+++ ||.|..  |++.|...+.|.+|+++|+++.
T Consensus         8 ~~~ek-py~C~~--CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAG-ILPCGL--CGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCC-CCCCTT--TCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCcc-CcCCCC--CCCccCCHHHHHhhhhhhCCCc
Confidence            56667 799999  9999999999999999999865

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=1.4e-06  Score=44.69  Aligned_cols=24  Identities=38%  Similarity=0.873  Sum_probs=10.3

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      ||.|+.  |++.|...+.|..|+++|
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            344443  444444444444444433

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.88  E-value=6.6e-06  Score=43.10  Aligned_cols=28  Identities=29%  Similarity=0.468  Sum_probs=26.0

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|+.  |++.|.....|..|++.|++++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPH--CDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCSS--CCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCcCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            699999  9999999999999999998764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=6e-06  Score=43.35  Aligned_cols=25  Identities=24%  Similarity=0.398  Sum_probs=13.2

Q ss_pred             ceecc--CCCccccccchhhHHHHHhhhc
Q psy1773         327 KFTCP--YQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       327 ~~~C~--~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      +|.|.  .  |++.|...+.|..|++.|+
T Consensus         2 ~~~C~~~~--C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFEN--CGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTT--TCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCc--CcCccCCHHHHHHHHHHhC
Confidence            35555  4  5555555555555555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=8.1e-06  Score=42.77  Aligned_cols=28  Identities=18%  Similarity=0.395  Sum_probs=25.9

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|+.  |++.|.....|..|++.|++++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            699999  9999999999999999998763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.02  E-value=2.6e-06  Score=45.25  Aligned_cols=27  Identities=15%  Similarity=0.413  Sum_probs=25.3

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|..  |++.|...+.|..|++.|+++
T Consensus         3 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIH--CQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            699999  999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=2.9e-06  Score=44.72  Aligned_cols=27  Identities=26%  Similarity=0.485  Sum_probs=25.3

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|+.  |++.|...+.|..|++.|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVM--CGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            699999  999999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.65  E-value=2.6e-05  Score=40.76  Aligned_cols=27  Identities=30%  Similarity=0.611  Sum_probs=24.7

Q ss_pred             cccCCC--CCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCP--LVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~--~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ++|.|+  .  |++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~--C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFEN--CGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTT--TCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCc--CcCccCCHHHHHHHHHHhCC
Confidence            478999  7  99999999999999999974

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.81  E-value=7.1e-06  Score=41.89  Aligned_cols=25  Identities=28%  Similarity=0.632  Sum_probs=23.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhc
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      ||.|+.  ||++|...+.|..|++.|+
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIRHHD   26 (26)
Confidence            699999  9999999999999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.60  E-value=2.8e-05  Score=41.02  Aligned_cols=27  Identities=19%  Similarity=0.439  Sum_probs=23.8

Q ss_pred             ceeccCCCccccccchhhHHHH-HhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAH-LKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H-~~~hh~~  355 (359)
                      ||.|+.  |++.|.+.+.|..| ++.|.++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            699999  99999999999999 6777654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.54  E-value=0.0035  Score=48.88  Aligned_cols=123  Identities=19%  Similarity=0.358  Sum_probs=79.3

Q ss_pred             CCccccChHHHHHHhhhhcCCCCccccCCcCccCCChH-----HHHHHHHHHccCCCccccccCCcCccccChHhhhccc
Q psy1773         213 CGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPC-----RLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHN  287 (359)
Q Consensus       213 C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~-----~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~  287 (359)
                      ||-.|-.. -+...+...     ...|+.|...+....     .+..-+.     .....|+..+|+..+. ...|..|+
T Consensus        36 CgH~fC~~-Ci~~~~~~~-----~~~CP~Cr~~~~~~~~~~~~~~~~~i~-----~l~v~C~n~GC~~~~~-~~~l~~H~  103 (170)
T 3hcs_A           36 CGHRFCKA-CIIKSIRDA-----GHKCPVDNEILLENQLFPDNFAKREIL-----SLMVKCPNEGCLHKME-LRHLEDHQ  103 (170)
T ss_dssp             TSCEEEHH-HHHHHHHHH-----CSBCTTTCCBCCGGGCEECHHHHHHHH-----TSEEECCSTTCCCEEE-GGGHHHHH
T ss_pred             CCCHHHHH-HHHHHHHhC-----CCCCCCCccCcchhhhhhhHHHHHHHh-----hcccCCCCCCCCceec-HhHHHHHH
Confidence            77766532 333333322     137889988776532     2222221     3456786557887765 45677776


Q ss_pred             cccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         288 KSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       288 ~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .  .-.-++..|+.  |+..+ ....|..|+...-..+ +-.|+.  |+..+. ...|..|...+.|+.
T Consensus       104 ~--~C~~~~v~C~~--C~~~~-~r~~l~~H~~~~C~~r-~~~C~~--C~~~~~-~~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          104 A--HCEFALMDCPQ--CQRPF-QKFHINIHILKDCPRR-QVSCDN--CAASMA-FEDKEIHDQNCPLAL  163 (170)
T ss_dssp             T--TCTTSEEECTT--TCCEE-EGGGHHHHHHHTCTTC-EEECTT--TCCEEE-GGGHHHHHTTCCC--
T ss_pred             h--cCCceeeECCC--CChHH-HHHHHHHHhhhhCCCC-CeECCC--CCCccC-HHHHHhHHHhCcChh
Confidence            4  33456678986  99888 6778999988777777 688998  988874 567889987776653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.34  E-value=0.0013  Score=48.38  Aligned_cols=78  Identities=18%  Similarity=0.312  Sum_probs=41.0

Q ss_pred             CccccCCcCccCCChHHHHHHHH-HHccCC-Ccccccc----CCcCccccChHhhhccccccccCCcccCCCCCCcCccc
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYK-AVHEST-KNFKCTY----DGCKLLFSTKSALKRHNKSKHLNMRMFPCPLVTCGKSF  308 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~-~~H~~~-~~~~C~~----~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f  308 (359)
                      +++.|.+|...|.+.+.+..|+. ..|... +.+.+..    +.=+..+..    ..+.. .+.+.+.|.|.+  |++.|
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~C~~--C~~~f  103 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKA----APAEI-SDGEDRSKCCPV--CNMTF  103 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSC----CSSCC-SSCCCTTTEETT--TTEEC
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCC----Ccccc-ccCCCCCeEcCC--CCCEe
Confidence            45677777777777777777763 134321 2233210    000111111    11222 345566677777  77777


Q ss_pred             CChHHHHHHHH
Q psy1773         309 LRSEHLQEHML  319 (359)
Q Consensus       309 ~~~~~l~~H~~  319 (359)
                      .+...|..|..
T Consensus       104 ~s~~~~~~H~~  114 (127)
T 1zu1_A          104 SSPVVAESHYI  114 (127)
T ss_dssp             SSHHHHHHHHT
T ss_pred             CCHHHHHHHHC
Confidence            77777777764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.14  E-value=0.0015  Score=47.20  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=26.6

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      .|+|+++|.|..  |++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            589999999998  999999999999998764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.64  E-value=0.012  Score=43.15  Aligned_cols=79  Identities=22%  Similarity=0.372  Sum_probs=50.5

Q ss_pred             CCccccccCCcCccccChHhhhccccc-cccCC-cccCCCC----CCcCcccCChHHHHHHHHhhcCCCCceeccCCCcc
Q psy1773         263 TKNFKCTYDGCKLLFSTKSALKRHNKS-KHLNM-RMFPCPL----VTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCL  336 (359)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-~H~~~-~~~~C~~----~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~  336 (359)
                      .+++.|.+  |...|.+.+.+..|... .|... +.|.+..    +.=++.+....    +...+.+.. .|.|.+  |+
T Consensus        30 ~~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~C~~--C~  100 (127)
T 1zu1_A           30 FSDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDR-SKCCPV--CN  100 (127)
T ss_dssp             BCSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCT-TTEETT--TT
T ss_pred             CCCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCC-CeEcCC--CC
Confidence            46789987  99999999999999831 35322 3333310    00022332211    122344445 699999  99


Q ss_pred             ccccchhhHHHHHh
Q psy1773         337 MSYVAKSSLYAHLK  350 (359)
Q Consensus       337 ~~f~~~~~l~~H~~  350 (359)
                      ..|.+...|..|..
T Consensus       101 ~~f~s~~~~~~H~~  114 (127)
T 1zu1_A          101 MTFSSPVVAESHYI  114 (127)
T ss_dssp             EECSSHHHHHHHHT
T ss_pred             CEeCCHHHHHHHHC
Confidence            99999999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.47  E-value=0.0035  Score=45.21  Aligned_cols=32  Identities=13%  Similarity=0.255  Sum_probs=27.9

Q ss_pred             HHhhcCCCCceeccCCCccccccchhhHHHHHhhh
Q psy1773         318 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       318 ~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ...|+|++ +|.|..  |++.|.+.+.|..|++..
T Consensus        42 ded~tGek-pfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGG-LHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGG-CSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCc-ceEccc--CcchhCCHHHHHHHHhhh
Confidence            34578888 799999  999999999999998764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.39  E-value=0.0099  Score=46.24  Aligned_cols=68  Identities=16%  Similarity=0.333  Sum_probs=28.4

Q ss_pred             CCccccChHHHHHHhhhhcCCCCccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccc
Q psy1773         213 CGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNK  288 (359)
Q Consensus       213 C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~  288 (359)
                      |+..+. ...+..|+..-  .-.+..|+.|+..+ .+..|..|+. ..-..++..|++  |+..+.. ..|..|..
T Consensus        90 C~~~~~-~~~l~~H~~~C--~~~~v~C~~C~~~~-~r~~l~~H~~-~~C~~r~~~C~~--C~~~~~~-~~l~~H~~  157 (170)
T 3hcs_A           90 CLHKME-LRHLEDHQAHC--EFALMDCPQCQRPF-QKFHINIHIL-KDCPRRQVSCDN--CAASMAF-EDKEIHDQ  157 (170)
T ss_dssp             CCCEEE-GGGHHHHHTTC--TTSEEECTTTCCEE-EGGGHHHHHH-HTCTTCEEECTT--TCCEEEG-GGHHHHHT
T ss_pred             CCceec-HhHHHHHHhcC--CceeeECCCCChHH-HHHHHHHHhh-hhCCCCCeECCC--CCCccCH-HHHHhHHH
Confidence            444332 23444554332  12344555555544 3344555543 233334444443  4444422 23444443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.33  E-value=0.012  Score=33.72  Aligned_cols=23  Identities=35%  Similarity=0.645  Sum_probs=19.7

Q ss_pred             CccccCCcCccCCChHHHHHHHH
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYK  257 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~  257 (359)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56888889988888888888877

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.02  E-value=0.023  Score=30.48  Aligned_cols=28  Identities=32%  Similarity=0.660  Sum_probs=23.6

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCC
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHEST  263 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  263 (359)
                      .|.|++|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999988778643

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.65  E-value=0.044  Score=31.43  Aligned_cols=27  Identities=30%  Similarity=0.437  Sum_probs=20.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      .+|.|+.  |+..|....+|+.||+---+
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCc--ccccccchHHHHhhhhhcCc
Confidence            5688887  88888888888888874433

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.66  E-value=0.058  Score=28.90  Aligned_cols=28  Identities=32%  Similarity=0.737  Sum_probs=20.4

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .|.|++  |.+.|.+...|..|....|...
T Consensus         5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQ--CMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTT--TCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcH--HHHHcCCHHHHHHHHHhccccC
Confidence            377777  7777777777777777776543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.48  E-value=0.64  Score=23.96  Aligned_cols=25  Identities=24%  Similarity=0.505  Sum_probs=20.4

Q ss_pred             cccCCcCccCCChHHHHHHHHHHcc
Q psy1773         237 LVCKGCGKQFKVPCRLREHYKAVHE  261 (359)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~~~H~  261 (359)
                      -.|..|.+.|+.-.+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3588899999998899999887664

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=84.91  E-value=0.25  Score=33.75  Aligned_cols=29  Identities=24%  Similarity=0.595  Sum_probs=17.8

Q ss_pred             cCCcccCCC-CCCcCcccCChHHHHHHHHh
Q psy1773         292 LNMRMFPCP-LVTCGKSFLRSEHLQEHMLQ  320 (359)
Q Consensus       292 ~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~  320 (359)
                      .....|.|. ..+|.++|-+..+|+.|+..
T Consensus        54 ~~~~if~C~~~~~CkrtyLs~rdlqaHI~~   83 (101)
T 3vk6_A           54 TRGSLFMCSIVQGCKRTYLSQRDLQAHINH   83 (101)
T ss_dssp             EGGGCCCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred             ccCCEEECCCCCCHHHHhcCHHHHHHHHHH
Confidence            334556666 55666666666666666643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.73  E-value=1.5  Score=23.54  Aligned_cols=24  Identities=17%  Similarity=0.263  Sum_probs=18.1

Q ss_pred             CCccccCCcCccCCChHHHHHHHH
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYK  257 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~  257 (359)
                      ...+.|..|+.+|.+...+..|.+
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            345778888888888888888854

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=80.22  E-value=1.3  Score=30.32  Aligned_cols=51  Identities=29%  Similarity=0.570  Sum_probs=39.6

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc-CCCccccccchhhHHHHHhhhcCCC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP-YQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .-.|+.  |...+.+-..       +..+. .|.|+ .++|.++|-+..+|+.|+...|..+
T Consensus        37 ~k~Cp~--C~~~V~rVe~-------~~~~~-if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~   88 (101)
T 3vk6_A           37 DKMCPG--CSDPVQRIEQ-------CTRGS-LFMCSIVQGCKRTYLSQRDLQAHINHRHMRA   88 (101)
T ss_dssp             CCBCTT--TCCBCSEEEE-------EEGGG-CCCCCCCCCCCCCCSSHHHHHHHHHHHTTTS
T ss_pred             CCCCcC--cCCeeeeeEE-------eccCC-EEECCCCCCHHHHhcCHHHHHHHHHHHhhhc
Confidence            357887  8887766543       22244 69999 9999999999999999999888543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	359
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d2ddha2	181	a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-	3e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	8e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.002
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-04
d1w07a2	198	a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, do	2e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.004

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           P+MC +  CGK F     L+ H+R H
Sbjct: 2   PFMCTWSYCGKRFTRSDELQRHKRTH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           P+ C ++GC KS+  + +LK+H R H
Sbjct: 2   PHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRH 169
           K + C  + C K ++ L NLK H+  H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 181

class: All alpha proteins
fold: Bromodomain-like
superfamily: Acyl-CoA dehydrogenase C-terminal domain-like
family: acyl-CoA oxidase C-terminal domains
domain: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 1   RFAVKKLLEFAQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYED 45
              VK   +      D + + VL  L +LYS + + +    F E 
Sbjct: 59  YVVVKVFSDKLPKIQDKAVQAVLRNLCLLYSLYGISQKGGDFLEG 103

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (89), Expect = 3e-05
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           PY C  + C + F   A L  H R+H
Sbjct: 2   PYACPVESCDRRFSRSADLTRHIRIH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 8e-05
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           PY+C + GC K F    +LKSH   H
Sbjct: 2   PYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRH 169
           + Y C    CNK+F   +NLK H++ H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 295 RMFPCPLVTCGKSFLRSEHLQEHMLQH 321
           R + CP   C K F +S +L+ H+L H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           PY CD+ GC K+F     L  H++ H
Sbjct: 3   PYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRHGK 171
           + Y CD   C+K F    +L  H   H +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 1e-04
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 297 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY 332
           F CP   CGKSF   +HL+EHM  H++ +  + C +
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 7e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 206 YMCDYKGCGKSFYLMASLKSHQRVH 230
           + C    CGKSF     LK H ++H
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLH 26

>d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 198

class: All alpha proteins
fold: Bromodomain-like
superfamily: Acyl-CoA dehydrogenase C-terminal domain-like
family: acyl-CoA oxidase C-terminal domains
domain: Acyl-coenzyme A oxidase 1, domains 3 and 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 7/64 (10%)

Query: 1   RFAVKKLLEF-AQDTDDVSARNVLTKLAVLYSTWSLEKHLATFYEDEE------DAITEA 53
              V K +    QD      +  L  L  +Y+ + L KHL  F               + 
Sbjct: 68  LIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQ 127

Query: 54  LQSL 57
           L+SL
Sbjct: 128 LRSL 131

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 19/26 (73%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           P+ C ++GCGK F L  +L++H R+H
Sbjct: 2   PFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVHVTNPEDLVCKGCGKQFKVPCRLREHYK 257
            Y C    CGKSF   +    H  +H+       C  CGK+FK+   L  H K
Sbjct: 3   LYPCQ---CGKSFTHKSQRDRHMSMHLGLRPY-GCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 143 KCYPCDQKNCNKRFTTLSNLKMHMVRHGKPLTLCCEELGCGRKFQTMKQYSTHLKEH 199
           K YPC    C K FT  S    HM  H       C    CG+KF+       H+K H
Sbjct: 2   KLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           PY C    CGK+F   + L  HQRVH
Sbjct: 7   PYGCVE--CGKAFSRSSILVQHQRVH 30

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (77), Expect = 0.002
 Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 188 TMKQYSTHLKEHSNVSAPYMCDYKGCGKSFYLMASLKSHQRVH 230
           ++ +Y   + +       + C + GC K+F    +++SH + H
Sbjct: 6   SIDKYVKEMPDK-----TFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.2 bits (74), Expect = 0.004
 Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 2/26 (7%)

Query: 205 PYMCDYKGCGKSFYLMASLKSHQRVH 230
           P+ C    C ++F     L +H R H
Sbjct: 3   PFQCRI--CMRNFSRSDHLTTHIRTH 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	359
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.51
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.27
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.21
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.17
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.1
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.09
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.07
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.04
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.04
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.99
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.93
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.89
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.89
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.89
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.86
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.85
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.85
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.83
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.78
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.77
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.76
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.75
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.71
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.6
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.51
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.39
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.13
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.98
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.98
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.94
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.85
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.84
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.79
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.78
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.78
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.75
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.75
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.68
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.64
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.62
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.6
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.56
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.55
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.52
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.49
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.49
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.47
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.45
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.34
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.34
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.32
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.28
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.15
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.11
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.04
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.03
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.99
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.93
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.74
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.65
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.64
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.6
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.38
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.37
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.3
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.27
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.11
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.04
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.89
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.84
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.8
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.41
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.2
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.18
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.17
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.14
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.95
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.7
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.7
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.66
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.64
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.43
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.24
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.16
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.14
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.65
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.33
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.04
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	91.4
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.4
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.07
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.73
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.52
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	86.96
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.28
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.06
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	85.12
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.08
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	83.08
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	80.11

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.8e-16  Score=96.39  Aligned_cols=53  Identities=30%  Similarity=0.625  Sum_probs=47.6

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhh
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ++||+| .  ||++|.....|..|+++|++++ ||.|++  ||++|.+.+.|.+|+++|
T Consensus         1 EK~y~C-~--Cgk~F~~~~~l~~H~~~Ht~ek-py~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLR-PYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-T--TSCEESSHHHHHHHHHHHSCCC-SEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-C--CCCeECCHHHhHHHhhcccccc-CCcCCC--cCCEecCHHHHHHHHhcC
Confidence            578999 5  9999999999999999999998 699988  999999999999998876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-15  Score=92.43  Aligned_cols=50  Identities=28%  Similarity=0.547  Sum_probs=24.5

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCCccccccCCcCccccChHhhhcccc
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCTYDGCKLLFSTKSALKRHNK  288 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~  288 (359)
                      +||.|. ||++|.....|..|++ +|++++||.|..  ||++|...+.|..|++
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~-~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGV--CGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHH-HHSCCCSEECTT--TSCEESSSHHHHHHHT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhh-ccccccCCcCCC--cCCEecCHHHHHHHHh
Confidence            445552 5555555555555543 455555555533  5555555555555544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.4e-12  Score=72.24  Aligned_cols=36  Identities=39%  Similarity=0.791  Sum_probs=24.5

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHccCCCccccc
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHESTKNFKCT  269 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  269 (359)
                      ++||.|.+||+.|...+.|..|++.+|++++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            366777777777777777777765567777777664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.7e-12  Score=71.35  Aligned_cols=37  Identities=32%  Similarity=0.568  Sum_probs=30.9

Q ss_pred             ccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         285 RHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       285 ~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +|++ .|++++||.|+.  ||++|...++|..|+++|+||
T Consensus         2 rH~~-~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEW-QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCS-CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCc-ccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5777 588888888887  888888888888888888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.5e-12  Score=67.71  Aligned_cols=32  Identities=34%  Similarity=0.597  Sum_probs=20.2

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |++++||+|..  ||++|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            56666666665  666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.5e-12  Score=70.16  Aligned_cols=37  Identities=30%  Similarity=0.679  Sum_probs=26.4

Q ss_pred             CCcccCCCCCCcCcccCChHHHHHHHH-hhcCCCCceeccC
Q psy1773         293 NMRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPY  332 (359)
Q Consensus       293 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~  332 (359)
                      .++||+|..  ||++|...+.|..|++ +|++++ ||.|.+
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ek-py~C~i   39 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSER-PHKCQV   39 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCC-CCCSSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCc-CcCCcC
Confidence            356777777  7777777777777765 577777 577753

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=7e-12  Score=68.56  Aligned_cols=33  Identities=27%  Similarity=0.548  Sum_probs=17.7

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      +|+|++ ||.|.+  ||++|...+.|.+|+++|+++
T Consensus         2 ~HTgek-Py~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEK-PYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCC-CEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCC-CEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            455555 455555  555555555555555555544

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=9.6e-12  Score=67.83  Aligned_cols=35  Identities=20%  Similarity=0.506  Sum_probs=24.5

Q ss_pred             HhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         319 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       319 ~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      |+|+|++ ||.|++  |+++|..+++|.+|++.+|+++
T Consensus         1 R~HTgek-P~~C~~--C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEK-PYECYI--CHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCC-SEECTT--TCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCC-CEeCCC--CcccccchHHHHHHcccccCCC
Confidence            4677777 577777  7777777777777777666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=3.7e-12  Score=70.76  Aligned_cols=37  Identities=22%  Similarity=0.399  Sum_probs=34.8

Q ss_pred             HHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         316 EHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       316 ~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      +|+++|++++ ||.|+.  ||++|...++|.+|+++|+|+
T Consensus         2 rH~~~Ht~ek-py~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERR-RYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSC-SSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCC-CEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            4889999999 799999  999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=7.6e-12  Score=72.72  Aligned_cols=43  Identities=23%  Similarity=0.531  Sum_probs=30.8

Q ss_pred             HhhhccccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         281 SALKRHNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       281 ~~l~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      ..|..|+.  |++++||.|.+++|+++|...+.|..|+++|+|++
T Consensus         5 ~~l~~h~~--h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE--EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh--ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34566663  77777777766667777777777777777777764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2e-11  Score=66.33  Aligned_cols=34  Identities=44%  Similarity=0.966  Sum_probs=27.7

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhcCCCCceecc
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP  331 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  331 (359)
                      |.|++++|+++|.+...|++|+++|+|++ ||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgek-py~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTR-DYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSC-CCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCC-CEeCC
Confidence            67777778888888888888888888888 68886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=4.2e-11  Score=65.89  Aligned_cols=35  Identities=34%  Similarity=0.650  Sum_probs=24.3

Q ss_pred             cccccccCCcccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         286 HNKSKHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       286 H~~~~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      |.+ .|++++||+|+.  |+++|...+.|..|+++|.+
T Consensus         2 h~R-~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STR-GSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSS-TTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCC-ccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            555 477777777776  77777777777777777653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.7e-11  Score=63.67  Aligned_cols=33  Identities=21%  Similarity=0.358  Sum_probs=31.0

Q ss_pred             hhcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         320 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       320 ~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      +|++++ ||.|..  ||++|..++.|.+|+++|+++
T Consensus         1 IHTgek-py~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEK-PYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCC-CEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCC-CeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            589999 799999  999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=65.79  Aligned_cols=34  Identities=21%  Similarity=0.519  Sum_probs=30.0

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      .|+|++||+|..  ||++|...+.|..|+++|+++.
T Consensus         2 ~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           2 THTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCCC
Confidence            589999999998  9999999999999999998764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.7e-11  Score=62.37  Aligned_cols=31  Identities=45%  Similarity=0.763  Sum_probs=18.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +||.|++++|+++|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            3566655556666666666666666666653

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=3.7e-11  Score=64.62  Aligned_cols=31  Identities=23%  Similarity=0.493  Sum_probs=18.5

Q ss_pred             ccCCcccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         291 HLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       291 H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      |+|++||+|++  |++.|...+.|.+|+++|++
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCC
Confidence            45566666655  66666666666666666554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=5.4e-11  Score=61.17  Aligned_cols=29  Identities=41%  Similarity=0.884  Sum_probs=21.5

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +||.|++  |+++|...+.|.+|+++|+||+
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            4677777  7777777777777777777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=8e-11  Score=60.75  Aligned_cols=30  Identities=30%  Similarity=0.615  Sum_probs=18.0

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +||.|++++|+++|.+.+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            356666555666666666666666666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=2.7e-11  Score=66.66  Aligned_cols=35  Identities=26%  Similarity=0.318  Sum_probs=32.4

Q ss_pred             HHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         317 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       317 H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |.|+|+|++ ||.|+.  |+++|.+++.|.+|+++|-+
T Consensus         2 h~R~HTgeK-Py~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIK-PFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSS-SBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCcc-CeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            678999999 799999  99999999999999998854

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.7e-11  Score=61.48  Aligned_cols=28  Identities=32%  Similarity=0.610  Sum_probs=13.3

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ||.|++++|+++|.+.+.|.+|+|+|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            4444444444444444444444444444

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.2e-10  Score=59.70  Aligned_cols=29  Identities=45%  Similarity=0.994  Sum_probs=20.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +||.|+.  ||++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            4677776  7777777777777777777764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.00  E-value=1.3e-11  Score=71.70  Aligned_cols=43  Identities=12%  Similarity=0.381  Sum_probs=38.1

Q ss_pred             HHHHHHHHhhcCCCCceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         312 EHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       312 ~~l~~H~~~h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ..|..|+. |++++ ||.|.+++|+++|...+.|.+|+++|++++
T Consensus         5 ~~l~~h~~-h~gek-py~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDK-TFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTT-EEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCC-CeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45667774 99999 799998889999999999999999999974

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=7.6e-11  Score=59.79  Aligned_cols=28  Identities=36%  Similarity=0.803  Sum_probs=15.6

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ++||+|+.  |+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            34555555  55555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.1e-10  Score=62.37  Aligned_cols=33  Identities=24%  Similarity=0.570  Sum_probs=26.6

Q ss_pred             cccCCcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         290 KHLNMRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       290 ~H~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      .|+|++||+|+.  |+++|...++|..|++.++++
T Consensus         2 ~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYI--CHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCC--CcccccchHHHHHHcccccCC
Confidence            588888888888  888888888888887665554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=2.9e-10  Score=61.04  Aligned_cols=32  Identities=28%  Similarity=0.557  Sum_probs=29.5

Q ss_pred             hcCCCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         321 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       321 h~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      |+|++ ||.|.+  |+++|.++++|.+|+++|.+.
T Consensus         2 ~TGek-Py~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKR-PFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCS-CEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCc-cccCCC--CCCcccChHHHHHHccccCCc
Confidence            78999 799999  999999999999999998764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.1e-10  Score=61.51  Aligned_cols=35  Identities=29%  Similarity=0.546  Sum_probs=32.3

Q ss_pred             eeccCCCCCCcccChhHHHhHHhhhCCCCcccccc
Q psy1773          79 WSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFKCKL  113 (359)
Q Consensus        79 ~~C~~~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  113 (359)
                      |.|++..|++.|...+.|+.|+++|+|++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78988889999999999999999999999999963

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.5e-10  Score=57.89  Aligned_cols=29  Identities=24%  Similarity=0.532  Sum_probs=27.8

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|+++||+++|...+.|.+|+++|+|+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            79999999999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.2e-10  Score=58.15  Aligned_cols=29  Identities=17%  Similarity=0.473  Sum_probs=27.7

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|++++|+++|...+.|.+|+++|+|+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            79999999999999999999999999886

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.9e-10  Score=58.43  Aligned_cols=30  Identities=17%  Similarity=0.407  Sum_probs=28.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|++++|+++|+..+.|.+|+++|++++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            799998899999999999999999999874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.86  E-value=8.6e-10  Score=56.59  Aligned_cols=29  Identities=31%  Similarity=0.725  Sum_probs=18.1

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHccCCC
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHESTK  264 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  264 (359)
                      +||.|++|++.|...+.|.+|++ +|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccC-cccCCC
Confidence            35666666666666666666655 666653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=3.8e-10  Score=57.59  Aligned_cols=28  Identities=18%  Similarity=0.536  Sum_probs=16.1

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      ||.|+++||+++|.+.+.|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4555555566666555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=1.2e-09  Score=57.23  Aligned_cols=29  Identities=34%  Similarity=0.694  Sum_probs=14.5

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      +||.|++++|+++|.+.+.|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            44555544455555555555555555543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=7.5e-10  Score=56.04  Aligned_cols=28  Identities=21%  Similarity=0.591  Sum_probs=26.1

Q ss_pred             CCCceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       324 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |+ ||.|++  |+++|...+.|.+|+++|+|
T Consensus         1 EK-Py~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QK-PFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CC-CEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             Cc-CccCCC--CcCEecccccccccCCCccC
Confidence            46 799999  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=6.5e-10  Score=55.99  Aligned_cols=26  Identities=19%  Similarity=0.664  Sum_probs=12.4

Q ss_pred             ceeccCCCccccccchhhHHHHHhhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ||.|+++|||++|.+.+.|.+|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            34444444444444444444444444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=1.4e-09  Score=55.49  Aligned_cols=29  Identities=34%  Similarity=0.793  Sum_probs=27.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      +||.|++++|+++|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            68999999999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.77  E-value=2.4e-09  Score=55.96  Aligned_cols=31  Identities=19%  Similarity=0.481  Sum_probs=28.5

Q ss_pred             CCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       324 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      |+ ||.|.++||+++|.+.+.|.+|+++|...
T Consensus         1 Er-P~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DR-PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CC-SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             Cc-CeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            45 79999999999999999999999999865

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.3e-09  Score=53.60  Aligned_cols=24  Identities=21%  Similarity=0.433  Sum_probs=11.5

Q ss_pred             ceeccCCCccccccchhhHHHHHhhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ||.|..  ||++|..++.|.+|+++|
T Consensus         2 Py~C~e--CgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLE--CGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHH
T ss_pred             CccCCC--CcCeeccCcccccCccCC
Confidence            344444  444444444444444444

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.5e-09  Score=54.65  Aligned_cols=28  Identities=29%  Similarity=0.663  Sum_probs=26.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|++  ||++|...+.|.+|+++|++++
T Consensus         2 py~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            799999  9999999999999999999874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.4e-09  Score=53.88  Aligned_cols=28  Identities=39%  Similarity=0.861  Sum_probs=26.8

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      +||.|++++|+++|.+.+.|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899999999999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=9e-09  Score=50.55  Aligned_cols=26  Identities=31%  Similarity=0.643  Sum_probs=24.8

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      +||+|..  ||++|...+.|..|+|+|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            6999998  9999999999999999995

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.3e-08  Score=48.27  Aligned_cols=28  Identities=36%  Similarity=0.685  Sum_probs=22.0

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      ||.|.+.||++++...++|++|++.+||
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6788777888888888888888887775

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=8.7e-08  Score=44.36  Aligned_cols=26  Identities=38%  Similarity=0.781  Sum_probs=18.3

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      |.+|++  |++.|+++..|+.|||.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            356776  77777777777777777764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=9.1e-08  Score=46.70  Aligned_cols=29  Identities=21%  Similarity=0.501  Sum_probs=23.4

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      +||.|.+.+|++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            57888888888888888888888887764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.9e-07  Score=43.68  Aligned_cols=29  Identities=28%  Similarity=0.778  Sum_probs=21.2

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      ++||.|++  |+..|.++..+..|.|+|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            46777777  777777777777777777664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.13  E-value=7.9e-07  Score=42.36  Aligned_cols=26  Identities=27%  Similarity=0.475  Sum_probs=19.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ||.|+..||+++|...+.|++|-+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            57777777777777777777777665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=8.6e-07  Score=42.51  Aligned_cols=25  Identities=36%  Similarity=0.866  Sum_probs=14.2

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      +||.|++  ||+.|......++|.++|
T Consensus         2 kPf~C~~--CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDI--CGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTT--TCCEESSHHHHHHHHGGG
T ss_pred             CCcccch--hhhhhhcchhhhhhhhhc
Confidence            4555555  555555555555555555

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1e-06  Score=41.79  Aligned_cols=27  Identities=30%  Similarity=0.559  Sum_probs=13.3

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      +||+|.+  |+..-.+.+.|..|+|.|+|
T Consensus         2 rpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             Ccceeee--cccccCCchheEEeeecccC
Confidence            3455544  55544455555555555444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.98  E-value=2.1e-06  Score=40.87  Aligned_cols=27  Identities=30%  Similarity=0.556  Sum_probs=21.1

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      .||+|+..+|+++|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467787777888888888888887776

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2e-06  Score=39.74  Aligned_cols=26  Identities=19%  Similarity=0.427  Sum_probs=23.9

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |..|++  |++.|..+..|..|++.|++
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            478999  99999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.1e-06  Score=43.16  Aligned_cols=23  Identities=17%  Similarity=0.426  Sum_probs=13.6

Q ss_pred             ceeccCCCccccccchhhHHHHH
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHL  349 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~  349 (359)
                      ||.|.++||.++|.+.+.-.+|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            45666556666666655555565

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=5.3e-06  Score=39.71  Aligned_cols=27  Identities=22%  Similarity=0.359  Sum_probs=24.4

Q ss_pred             CCCceeccCCCccccccchhhHHHHHhhhc
Q psy1773         324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       324 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      ++ ||.|.+  ||+.|+......+|.+.|-
T Consensus         1 Ek-Pf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EK-PFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CC-CEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CC-Ccccch--hhhhhhcchhhhhhhhhcc
Confidence            45 799999  9999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.8e-06  Score=41.13  Aligned_cols=32  Identities=19%  Similarity=0.423  Sum_probs=27.1

Q ss_pred             CeeeccCCCCCCcccChhHHHhHHhhhCCCCccc
Q psy1773          77 QLWSCPIVNCNFTSVNLNTFKIHLLKHFDKRPFK  110 (359)
Q Consensus        77 ~~~~C~~~~C~~~~~~~~~l~~H~~~h~~~~~~~  110 (359)
                      +...|+  .|++.|.+...|.+|..+|++++||.
T Consensus         4 k~~~ce--~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACE--ICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEET--TTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHH--HHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            456788  69999999999999999999999873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=8.2e-06  Score=39.58  Aligned_cols=29  Identities=21%  Similarity=0.614  Sum_probs=26.2

Q ss_pred             CCCceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       324 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ++ ||.|++  |+.+|..+..+.-|++.|-|+
T Consensus         1 ek-p~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EK-PYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CC-SSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CC-Ccccch--HHHHhhccccceEeeecccCc
Confidence            45 799999  999999999999999998765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=4.3e-06  Score=41.60  Aligned_cols=29  Identities=38%  Similarity=0.794  Sum_probs=20.0

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhcCCCCce
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF  328 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  328 (359)
                      ..|..  ||+.|...-.|.+|..+|++++ ||
T Consensus         6 ~~ce~--cgk~frdvyhlnrhklshs~ek-py   34 (35)
T d2epra1           6 VACEI--CGKIFRDVYHLNRHKLSHSGEK-PY   34 (35)
T ss_dssp             EEETT--TTEEESSHHHHHHHGGGSCSCC-CC
T ss_pred             hhHHH--HHHHHHHHHHHHhhhcccCCCC-CC
Confidence            35666  7777777777777777777777 45

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.78  E-value=5.6e-06  Score=39.57  Aligned_cols=28  Identities=39%  Similarity=0.715  Sum_probs=14.1

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      ||.|...+|.+.|.+.-.|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            4445444455555555555555555544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=9.4e-06  Score=38.46  Aligned_cols=27  Identities=26%  Similarity=0.474  Sum_probs=25.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||+|..  |.+.-.+.+.|..|++.|+|+
T Consensus         3 pfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           3 PFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             cceeee--cccccCCchheEEeeecccCc
Confidence            799999  999999999999999999985

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.1e-05  Score=42.10  Aligned_cols=29  Identities=21%  Similarity=0.431  Sum_probs=19.7

Q ss_pred             CCCceeccCCCccccccchhhHHHHHhhhc
Q psy1773         324 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       324 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      ++ ||.|..+||+.+|.+...|..|...|-
T Consensus         4 dk-PF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DK-PFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CC-CEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CC-ceecCCCCccccccchHHHHHhhhhhe
Confidence            44 577777777777777777777766654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=7e-06  Score=40.28  Aligned_cols=30  Identities=20%  Similarity=0.473  Sum_probs=27.4

Q ss_pred             cccCCCCCCcCcccCChHHHHHHH-HhhcCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHM-LQHNEN  324 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~  324 (359)
                      +||.|.+++|.|.|++.++-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            589999999999999999999997 998764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1e-05  Score=38.10  Aligned_cols=25  Identities=40%  Similarity=0.780  Sum_probs=14.2

Q ss_pred             cccCCcCccCCChHHHHHHHHHHccC
Q psy1773         237 LVCKGCGKQFKVPCRLREHYKAVHES  262 (359)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~~~H~~  262 (359)
                      ..|.+||+.|...+.|++|.. +|++
T Consensus         3 hvc~ecgkaf~essklkrh~l-vhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQL-VHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGG-GTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhh-cccC
Confidence            345566666666666666643 5554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=2.8e-05  Score=37.07  Aligned_cols=26  Identities=23%  Similarity=0.566  Sum_probs=17.4

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      |.|+.  ||......+-|+.|+|+|+++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            56666  666666666666666666665

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.62  E-value=1.7e-05  Score=38.89  Aligned_cols=28  Identities=25%  Similarity=0.615  Sum_probs=23.5

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|.+  |++.|+.+..|.+|++.-|+++
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcCc
Confidence            588888  8888888888888888888765

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2e-05  Score=41.08  Aligned_cols=30  Identities=30%  Similarity=0.656  Sum_probs=22.7

Q ss_pred             CCcccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         293 NMRMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       293 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      .++||.|..++|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            467788877778888888888888877664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=3e-05  Score=36.97  Aligned_cols=27  Identities=19%  Similarity=0.363  Sum_probs=25.4

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      |.|+.  ||....-.+.|.+|++.|++++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCCC
Confidence            89999  9999999999999999999864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=3.4e-05  Score=36.93  Aligned_cols=28  Identities=32%  Similarity=0.681  Sum_probs=21.4

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      ||.|..  |.++.+..++|..|+++.|+..
T Consensus         2 py~cqy--c~yrsadssnlkthiktkhske   29 (30)
T d1klra_           2 TYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             Cccccc--cccccccchhhhhhhhcccccC
Confidence            577877  8877777788888887777654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.6e-05  Score=36.61  Aligned_cols=26  Identities=23%  Similarity=0.525  Sum_probs=13.6

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      +||+|..  |.......++|+.|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            3455555  5555555555555555553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=3.2e-05  Score=35.22  Aligned_cols=23  Identities=35%  Similarity=0.636  Sum_probs=11.9

Q ss_pred             eeccCCCccccccchhhHHHHHhhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      |.|+.  |..+|..++.|.+|++.|
T Consensus         1 ykcgl--cersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhh
Confidence            34544  555555555555555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=6.1e-05  Score=34.85  Aligned_cols=26  Identities=38%  Similarity=0.682  Sum_probs=18.3

Q ss_pred             CCCCCCcCcccCChHHHHHHHHhhcCCC
Q psy1773         298 PCPLVTCGKSFLRSEHLQEHMLQHNENK  325 (359)
Q Consensus       298 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~  325 (359)
                      +|+.  |.++|.++.-|+.|-|.|+|++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            4666  7777777777777777777664

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.7e-05  Score=36.20  Aligned_cols=25  Identities=24%  Similarity=0.353  Sum_probs=15.0

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      ..|..  ||++|...+.|++|+..|++
T Consensus         3 hvc~e--cgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAE--CGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTT--TCCEESSHHHHHHHGGGTSC
T ss_pred             chHHH--HhHHHHHHHHHHHHhhcccC
Confidence            34555  66666666666666666654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.47  E-value=4.8e-05  Score=34.62  Aligned_cols=24  Identities=33%  Similarity=0.769  Sum_probs=18.3

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      |+|..  |.++|..++.|.+|++.|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            56777  8888888888888877764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4.7e-05  Score=36.26  Aligned_cols=24  Identities=33%  Similarity=0.780  Sum_probs=17.5

Q ss_pred             ceeccCCCccccccchhhHHHHHhhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      ||.|..  |+.+|.++.+|.+||+..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            477777  777777777777777654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.34  E-value=8.1e-05  Score=35.47  Aligned_cols=29  Identities=17%  Similarity=0.334  Sum_probs=27.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|...||.+.|.+-..|.+|...|+++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            79999999999999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00013  Score=34.89  Aligned_cols=28  Identities=21%  Similarity=0.374  Sum_probs=16.5

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCC
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHEST  263 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  263 (359)
                      ||.|..|.......++|..|++..|+.+
T Consensus         2 py~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccccccccccccchhhhhhhhcccccC
Confidence            5566666666666666666666555543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=0.00011  Score=34.85  Aligned_cols=29  Identities=21%  Similarity=0.531  Sum_probs=20.9

Q ss_pred             CCeeeccCCCCCCcccChhHHHhHHhhhCCC
Q psy1773          76 QQLWSCPIVNCNFTSVNLNTFKIHLLKHFDK  106 (359)
Q Consensus        76 ~~~~~C~~~~C~~~~~~~~~l~~H~~~h~~~  106 (359)
                      ++.|.|.  .|..+|+..-.|+.||.+|+|+
T Consensus         2 eqvftcs--~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCS--VCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeH--HHHHHHHHHHhheeeeecccCC
Confidence            3457777  6777777777777777777764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.32  E-value=0.00012  Score=33.91  Aligned_cols=26  Identities=31%  Similarity=0.558  Sum_probs=18.6

Q ss_pred             ccCCcCccCCChHHHHHHHHHHccCCC
Q psy1773         238 VCKGCGKQFKVPCRLREHYKAVHESTK  264 (359)
Q Consensus       238 ~C~~C~~~f~~~~~l~~H~~~~H~~~~  264 (359)
                      .|+.|.++|.++..|+.|-+ .|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr-~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR-KHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH-HHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccc-cccCCC
Confidence            47777777777777777755 677663

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=9.4e-05  Score=37.70  Aligned_cols=29  Identities=28%  Similarity=0.470  Sum_probs=17.8

Q ss_pred             ccCCCCCCcCc---ccCChHHHHHHHHhhcCC
Q psy1773         296 MFPCPLVTCGK---SFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       296 ~~~C~~~~C~~---~f~~~~~l~~H~~~h~~~  324 (359)
                      .|.|.+.+|.+   .|.....|..|||+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            35566656643   366666666777766664

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00011  Score=34.89  Aligned_cols=28  Identities=32%  Similarity=0.790  Sum_probs=19.1

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      ..|.|.+  |...|.+...|+.||-.|+|+
T Consensus         3 qvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            3466766  777777777777777777664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00011  Score=38.70  Aligned_cols=24  Identities=21%  Similarity=0.804  Sum_probs=14.1

Q ss_pred             CCcccCCCCCCcCcccCChHHHHHHH
Q psy1773         293 NMRMFPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       293 ~~~~~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      |.+||.|.+  |++.|-+..++.+|.
T Consensus         2 GiKPYeC~~--C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNI--CAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSS--SCCEESCHHHHHHHH
T ss_pred             CCCceeccc--hhhhhhhHHHHHHhh
Confidence            455666655  666666666665553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.11  E-value=0.00011  Score=35.92  Aligned_cols=27  Identities=22%  Similarity=0.412  Sum_probs=14.2

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccC
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHES  262 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  262 (359)
                      ||.|.+|++.|..+..|.+|.+..|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            355555555555555555555544443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.04  E-value=0.00022  Score=37.42  Aligned_cols=28  Identities=29%  Similarity=0.705  Sum_probs=16.3

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +.|.|.+  |++.|.+..+|--||+.|..+
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcch
Confidence            3456665  666666666666666665443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00024  Score=33.26  Aligned_cols=25  Identities=28%  Similarity=0.462  Sum_probs=23.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhc
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      ||.|..  |++.-...++|.+|+|.|.
T Consensus         3 p~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             Cccccc--ccchhcchhhHhhhhhccc
Confidence            799999  9999999999999999885

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00025  Score=33.84  Aligned_cols=27  Identities=33%  Similarity=0.690  Sum_probs=22.4

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||+|..  |..-..++++|..|++.-|++
T Consensus         2 PFkC~~--CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNY--CSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHHHHSS
T ss_pred             Ccccce--ecccccCcchHHHHHHHHccC
Confidence            688888  888888888888888887765

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00028  Score=37.12  Aligned_cols=26  Identities=19%  Similarity=0.497  Sum_probs=22.9

Q ss_pred             cCCCCceeccCCCccccccchhhHHHHHh
Q psy1773         322 NENKPKFTCPYQDCLMSYVAKSSLYAHLK  350 (359)
Q Consensus       322 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~  350 (359)
                      +|-+ ||.|.+  |++.|..+.++.+|..
T Consensus         1 TGiK-PYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIK-PYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCC-CEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCC-ceeccc--hhhhhhhHHHHHHhhh
Confidence            4567 799999  9999999999999964

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00066  Score=32.33  Aligned_cols=27  Identities=30%  Similarity=0.546  Sum_probs=19.0

Q ss_pred             CccccCCcCccCCChHHHHHHHHHHcc
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYKAVHE  261 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  261 (359)
                      +||+|..|.....+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777765553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00072  Score=31.82  Aligned_cols=24  Identities=25%  Similarity=0.588  Sum_probs=14.5

Q ss_pred             eccCCCccccccchhhHHHHHhhh
Q psy1773         329 TCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       329 ~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      .|+..||++.|...+.+++|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            355556666666666666666554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0006  Score=34.66  Aligned_cols=29  Identities=14%  Similarity=0.280  Sum_probs=18.1

Q ss_pred             eeeccCCCCCC---cccChhHHHhHHhhhCCC
Q psy1773          78 LWSCPIVNCNF---TSVNLNTFKIHLLKHFDK  106 (359)
Q Consensus        78 ~~~C~~~~C~~---~~~~~~~l~~H~~~h~~~  106 (359)
                      .|.|.|..|..   .|.....|..||+.|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            36666666654   356666666677766654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0007  Score=32.14  Aligned_cols=24  Identities=29%  Similarity=0.603  Sum_probs=18.2

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhh
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      ||.|..  |+.+|.++.+|..||++.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            577777  888888888888887654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.38  E-value=0.0013  Score=29.75  Aligned_cols=22  Identities=27%  Similarity=0.539  Sum_probs=12.9

Q ss_pred             ccccCCcCccCCChHHHHHHHH
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYK  257 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~  257 (359)
                      ||+|.-|...|..+..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4556666666666666666553

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.37  E-value=0.00096  Score=32.28  Aligned_cols=27  Identities=30%  Similarity=0.615  Sum_probs=13.1

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |.|..++|+..|.....|..|+-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            444444455555444445555444444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.30  E-value=0.0015  Score=34.23  Aligned_cols=29  Identities=17%  Similarity=0.508  Sum_probs=26.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK  357 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~  357 (359)
                      .|.|.+  |++.|.+...|--|++.|..++.
T Consensus         5 ~~~C~~--C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           5 SYTCSF--CKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHHTTCCSCT
T ss_pred             ccCCCC--CCCccCCcccccchHhhhcchHH
Confidence            599999  99999999999999999877654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.27  E-value=0.0017  Score=29.49  Aligned_cols=24  Identities=29%  Similarity=0.496  Sum_probs=19.2

Q ss_pred             cccCCcCccCCChHHHHHHHHHHc
Q psy1773         237 LVCKGCGKQFKVPCRLREHYKAVH  260 (359)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~~~H  260 (359)
                      |.|++|-+.|..+.++..|.+.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.11  E-value=0.0019  Score=31.19  Aligned_cols=30  Identities=23%  Similarity=0.665  Sum_probs=27.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHHHhhcCC
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN  324 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  324 (359)
                      +.|.|..+.|+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            568999999999999999999999999985

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0027  Score=29.80  Aligned_cols=24  Identities=29%  Similarity=0.696  Sum_probs=19.7

Q ss_pred             CCCCCCcCcccCChHHHHHHHHhh
Q psy1773         298 PCPLVTCGKSFLRSEHLQEHMLQH  321 (359)
Q Consensus       298 ~C~~~~C~~~f~~~~~l~~H~~~h  321 (359)
                      .|+..+|++.|.+.+.++.|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            466667999999999999998887

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0033  Score=29.40  Aligned_cols=24  Identities=25%  Similarity=0.275  Sum_probs=15.1

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      -+|+.  |.++.+++..|+.|.|+|-
T Consensus         3 ekc~e--csyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSE--CSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSS--SSCEESSHHHHHHHHGGGC
T ss_pred             ccCcc--cccccCcHHHHHHhhcccc
Confidence            35655  6666666666666666663

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.84  E-value=0.0033  Score=29.06  Aligned_cols=25  Identities=16%  Similarity=0.493  Sum_probs=13.3

Q ss_pred             eeccCCCccccccchhhHHHHHhhh
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      |.|...+|++.|.....|+.|+..|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            4454445555555555555555544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.80  E-value=0.0027  Score=29.36  Aligned_cols=26  Identities=31%  Similarity=0.814  Sum_probs=18.2

Q ss_pred             cCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      |.|...+|++.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45655667777777777777777664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.41  E-value=0.0061  Score=27.63  Aligned_cols=24  Identities=33%  Similarity=0.999  Sum_probs=14.8

Q ss_pred             eeccCCCccccccchhhHHHHHhhhc
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      |.|+.  |-+.|..+.++..|++.-|
T Consensus         2 ypcp~--cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHHHT
T ss_pred             cCCch--hhHHhccccCceEEEEEec
Confidence            55666  6666666666666665544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.20  E-value=0.0075  Score=27.19  Aligned_cols=21  Identities=33%  Similarity=0.884  Sum_probs=10.6

Q ss_pred             ccCCCCCCcCcccCChHHHHHHH
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      ||+|..  |...|..+.+|..||
T Consensus         2 pykcss--csqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHH
Confidence            445544  555555555555554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.008  Score=27.96  Aligned_cols=24  Identities=21%  Similarity=0.437  Sum_probs=16.9

Q ss_pred             cccCCcCccCCChHHHHHHHHHHc
Q psy1773         237 LVCKGCGKQFKVPCRLREHYKAVH  260 (359)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~~~H  260 (359)
                      |.|+.|+-....++.|+.|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            567777777777777777776555

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.0083  Score=27.91  Aligned_cols=26  Identities=46%  Similarity=0.737  Sum_probs=20.5

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      .|+|+.  |+-....++.|..|++.-|.
T Consensus         2 k~qcph--c~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCc--chhheeehhhhhHHhhhccc
Confidence            378888  88888888888888887653

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.0065  Score=30.23  Aligned_cols=23  Identities=30%  Similarity=0.667  Sum_probs=19.0

Q ss_pred             CccccCCcCccCCChHHHHHHHH
Q psy1773         235 EDLVCKGCGKQFKVPCRLREHYK  257 (359)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~  257 (359)
                      ..|.|..|+++|..+..+.+|..
T Consensus         3 ~afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             ceeeecccccchhcchHHHHHhh
Confidence            45889999999999988888854

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0052  Score=28.97  Aligned_cols=21  Identities=38%  Similarity=0.941  Sum_probs=10.5

Q ss_pred             cccCCcCccccChHhhhcccc
Q psy1773         268 CTYDGCKLLFSTKSALKRHNK  288 (359)
Q Consensus       268 C~~~~C~~~f~~~~~l~~H~~  288 (359)
                      |.+++|++.|+++.-|..|.+
T Consensus         3 cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchhhhccHHHHHhHHH
Confidence            334455555555555555444

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.70  E-value=0.015  Score=27.47  Aligned_cols=29  Identities=24%  Similarity=0.659  Sum_probs=23.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      .|.|...+|+..|.++.++.+|..+-|+-
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn~   30 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHNI   30 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhccC
Confidence            47888778999999999999888877753

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.70  E-value=0.011  Score=27.38  Aligned_cols=22  Identities=36%  Similarity=0.720  Sum_probs=12.9

Q ss_pred             ceeccCCCccccccchhhHHHHHh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLK  350 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~  350 (359)
                      ||.|+.  ||+.+..+.+|..|-.
T Consensus         1 pf~c~k--cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHH
Confidence            356655  6666666666666543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.016  Score=27.03  Aligned_cols=26  Identities=23%  Similarity=0.316  Sum_probs=23.2

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |-+|+.  |.++..++..|+.|-|.|-.
T Consensus         2 pekc~e--csyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSE--CSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcc--cccccCcHHHHHHhhccccC
Confidence            467988  99999999999999998864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.64  E-value=0.014  Score=27.05  Aligned_cols=22  Identities=50%  Similarity=1.029  Sum_probs=19.3

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHH
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHML  319 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~  319 (359)
                      ||+|..  ||+.+-++..|..|..
T Consensus         1 pf~c~k--cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHH
Confidence            689988  9999999999999864

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.015  Score=27.39  Aligned_cols=24  Identities=25%  Similarity=0.492  Sum_probs=16.0

Q ss_pred             ccCCCccccccchhhHHHHHhhhc
Q psy1773         330 CPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       330 C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      |..+|||+-|+++.-|..|.+-.|
T Consensus         3 cdf~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHHHGG
T ss_pred             CCCCCchhhhccHHHHHhHHHHHH
Confidence            555667777777777777765544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.019  Score=31.17  Aligned_cols=25  Identities=44%  Similarity=0.978  Sum_probs=21.6

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhc
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHN  322 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  322 (359)
                      .|.|..  |+|.|.....|+.|...|-
T Consensus         6 l~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccc--cccccCCHHHHhHhHHhcC
Confidence            588998  9999999999999988773

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.013  Score=31.84  Aligned_cols=25  Identities=16%  Similarity=0.299  Sum_probs=22.5

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhc
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVH  353 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh  353 (359)
                      .|.|..  |++.|.....|+.|-..|-
T Consensus         6 l~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccc--cccccCCHHHHhHhHHhcC
Confidence            588999  9999999999999988764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.14  E-value=0.045  Score=27.13  Aligned_cols=25  Identities=16%  Similarity=0.530  Sum_probs=15.3

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |.|..  ||+.|..+..+.+|.-.-.+
T Consensus         5 fvcsk--cgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSK--CGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSS--SCCEESCHHHHHHHHHHCCC
T ss_pred             eeecc--cccchhcchHHHHHhhhcCC
Confidence            66666  66666666666666554443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.65  E-value=0.056  Score=26.50  Aligned_cols=23  Identities=35%  Similarity=0.823  Sum_probs=18.1

Q ss_pred             CCccccCCcCccCCChHHHHHHH
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHY  256 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~  256 (359)
                      ...|.|.-||..|++.+.|..|.
T Consensus         6 parf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHT
T ss_pred             ccceeccccceeecChhHHHhhh
Confidence            34688888888888888888884

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.33  E-value=0.055  Score=26.53  Aligned_cols=22  Identities=32%  Similarity=0.637  Sum_probs=16.7

Q ss_pred             cccCCCCCCcCcccCChHHHHHHH
Q psy1773         295 RMFPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       295 ~~~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      ..|.|.-  ||-.|++.+.|..|+
T Consensus         7 arf~c~p--cgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTT--TCCBCSCHHHHHHHT
T ss_pred             cceeccc--cceeecChhHHHhhh
Confidence            3577877  888888888888774

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.04  E-value=0.066  Score=26.61  Aligned_cols=29  Identities=21%  Similarity=0.487  Sum_probs=23.1

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHccC
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHES  262 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  262 (359)
                      ...|.|.+|.+++...+++-+|.-..|..
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            35688999999999999998888766653

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.088  Score=29.14  Aligned_cols=29  Identities=24%  Similarity=0.635  Sum_probs=20.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHST  355 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~  355 (359)
                      ||.|..+||...|+-..+|..|-+..|..
T Consensus        20 pyrcvhqgc~aaftiq~nlilhy~avh~s   48 (61)
T d1x3ca1          20 PYRCVHQGCFAAFTIQQNLILHYQAVHKS   48 (61)
T ss_dssp             SCBCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred             ceeeeccchhhhhhhhhhHHHHHHHHhhh
Confidence            57777777777777777777777766643

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.14  Score=24.06  Aligned_cols=26  Identities=31%  Similarity=0.616  Sum_probs=19.7

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHcc
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHE  261 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~  261 (359)
                      -|.|..|++...+...++-|+...|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            36788888888888888888765554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.07  E-value=0.18  Score=23.67  Aligned_cols=22  Identities=23%  Similarity=0.622  Sum_probs=11.6

Q ss_pred             cCCCCCCcCcccCChHHHHHHH
Q psy1773         297 FPCPLVTCGKSFLRSEHLQEHM  318 (359)
Q Consensus       297 ~~C~~~~C~~~f~~~~~l~~H~  318 (359)
                      |.|+..+|+.+|..+..++.|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhf   24 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHF   24 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHH
Confidence            4454444555555555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.73  E-value=0.48  Score=22.18  Aligned_cols=26  Identities=27%  Similarity=0.675  Sum_probs=18.3

Q ss_pred             ccCCCCCCcCcccCChHHHHHHHHhhcC
Q psy1773         296 MFPCPLVTCGKSFLRSEHLQEHMLQHNE  323 (359)
Q Consensus       296 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  323 (359)
                      .|.|..  ||+...+...++.|+..-++
T Consensus         2 ~ftc~h--cgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHH--CGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechh--HHHHHhhccCceEEEeeccc
Confidence            367776  88888777777777655444

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.52  E-value=0.23  Score=24.63  Aligned_cols=28  Identities=25%  Similarity=0.514  Sum_probs=18.6

Q ss_pred             ceeccCCCccccccchhhHHHHHhhhcCCC
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHVHSTN  356 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~hh~~~  356 (359)
                      .|.|.+  |.+.+..-+++-+|.-..|..|
T Consensus         8 ~yRC~~--C~r~YTHISNFCRHyvtSHk~n   35 (37)
T d2drpa1           8 TYRCKV--CSRVYTHISNFCRHYVTSHKRN   35 (37)
T ss_dssp             EEECTT--TCCEESSHHHHHHHHHHHSSSS
T ss_pred             EEEeeh--hhHHHHHHHHHHHHHHhhcccC
Confidence            467766  7777777777777766666543

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.96  E-value=0.32  Score=24.34  Aligned_cols=29  Identities=28%  Similarity=0.643  Sum_probs=22.4

Q ss_pred             eeccCCCccccccchhhHHHHHhhhcCCCCC
Q psy1773         328 FTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI  358 (359)
Q Consensus       328 ~~C~~~~C~~~f~~~~~l~~H~~~hh~~~~~  358 (359)
                      ..|-.  |-..|.+.-++.+|+-..|++|.+
T Consensus         4 ltcle--cmrtfkssfsiwrhqvevhnqn~m   32 (41)
T d1wjpa3           4 LTCLE--CMRTFKSSFSIWRHQVEVHNQNNM   32 (41)
T ss_dssp             GEEGG--GTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             ccHHH--HHHHHHHHHHHHHhhheecccccc
Confidence            56766  888888888888888888887765

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.28  E-value=0.33  Score=26.07  Aligned_cols=28  Identities=21%  Similarity=0.325  Sum_probs=21.6

Q ss_pred             CCccccCCcCccCCChHHHHHHHHHHcc
Q psy1773         234 PEDLVCKGCGKQFKVPCRLREHYKAVHE  261 (359)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~  261 (359)
                      +.|-.|++|+....+..+|++|+...|.
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            4567788888888888888888775564

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.06  E-value=0.12  Score=31.19  Aligned_cols=25  Identities=24%  Similarity=0.559  Sum_probs=17.2

Q ss_pred             CcccCCCCCCcCcccCChHHHHHHHHh
Q psy1773         294 MRMFPCPLVTCGKSFLRSEHLQEHMLQ  320 (359)
Q Consensus       294 ~~~~~C~~~~C~~~f~~~~~l~~H~~~  320 (359)
                      ...|-|..  |++.|.+...|..|+++
T Consensus        13 ~gqfYCv~--C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLA--CARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             CCEEeccc--ccCccCCHHHHHHHHcc
Confidence            34467776  77777777777777653

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.12  E-value=0.24  Score=27.36  Aligned_cols=28  Identities=21%  Similarity=0.326  Sum_probs=15.4

Q ss_pred             CCcccCCCCCCcCcccCChHHHHHHHHh
Q psy1773         293 NMRMFPCPLVTCGKSFLRSEHLQEHMLQ  320 (359)
Q Consensus       293 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~  320 (359)
                      .-+||.|..++|...|.-..+|.-|-+.
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~a   44 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQA   44 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHH
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHH
Confidence            3445555555555555555555555443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.08  E-value=0.19  Score=30.23  Aligned_cols=24  Identities=17%  Similarity=0.459  Sum_probs=21.5

Q ss_pred             ceeccCCCccccccchhhHHHHHhhh
Q psy1773         327 KFTCPYQDCLMSYVAKSSLYAHLKHV  352 (359)
Q Consensus       327 ~~~C~~~~C~~~f~~~~~l~~H~~~h  352 (359)
                      .|-|..  |++.|.+...|..|++..
T Consensus        15 qfYCv~--C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          15 LHRCLA--CARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             CSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             EEeccc--ccCccCCHHHHHHHHccc
Confidence            589999  999999999999998753

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.08  E-value=0.41  Score=23.93  Aligned_cols=28  Identities=29%  Similarity=0.567  Sum_probs=21.7

Q ss_pred             ccccCCcCccCCChHHHHHHHHHHccCC
Q psy1773         236 DLVCKGCGKQFKVPCRLREHYKAVHEST  263 (359)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  263 (359)
                      ...|-+|.++|.+..++.+|.-.+|...
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnqn   30 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQN   30 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecccc
Confidence            3568888888888888888877677543

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.11  E-value=0.73  Score=22.45  Aligned_cols=25  Identities=20%  Similarity=0.578  Sum_probs=17.4

Q ss_pred             ccCCCccccccchhhHHHHHhhhcC
Q psy1773         330 CPYQDCLMSYVAKSSLYAHLKHVHS  354 (359)
Q Consensus       330 C~~~~C~~~f~~~~~l~~H~~~hh~  354 (359)
                      |-..+|+..|.+-..|..|+..-|-
T Consensus         4 ChW~~C~~eFdtQd~LV~HinndHI   28 (32)
T d2glia1           4 CRWDGCSQEFDSQEQLVHHINSEHI   28 (32)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTS
T ss_pred             ccccccccccCCHHHHHHHcccccc
Confidence            4445677777777777777776653