Diaphorina citri psyllid: psy17793

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MRDIQSQCYCLWLDRAGFVSVLRLPARQRPSLSIYCYALDILFRGVAVEITNVLSQVPNVALDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPTDRNTDTIGFFICKLRKKYGEAPEIYIHPHLNDCIVIGPLLKLSQSVVHHPVQIIVDQPCALAVLRGADVFAPGVLAMPLGKNSYKTPYRRVQKTQNKQLYWV
cccHHHHHHHHHHHHHcHHHHHHHHcccccccCEEcccccccccccEEEEccccccccccccccccEEEcccccHHHHcccccccccEEEEEccccccHHHHHHHHccccEEEEECccccHHHHHHHHHHHHccccEEEEECccccccccccHHHHHHHHHccccccEEEEccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccHHccHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHccccccccccccccccEEEEEEEEcccccccccccccccccccccHHHHHHHHHHcccccCECccccccccccccCEEccccccccccccccccccHHHHHHcccccccc
*****SQCYCLWLDRAGFVSVLRLPARQRPSLSIYCYALDILFRGVAVEITNVLSQVPNVALDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPTDRNTDTIGFFICKLRKKYGEAPEIYIHPHLNDCIVIGPLLKLSQSVVHHPVQIIVDQPCALAVLRGADVFAPGVLAMPLGKNSYKTPYRRVQKTQNK*LYWV
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MRDIQSQCYCLWLDRAGFVSVLRLPARQRPSLSIYCYALDILFRGVAVEITNVLSQVPNVALDSSMGILQNLPSILAGHYLDVQPGQKVLDMCAAPGNKLTHIALLMNDTGTLIALDKSKPRVTKLEETIKKLQLSSIQTHVYDSTRINTSSQIDIERMKLQKESFDRILLDAPCSGFGQRPMFYNANSFLNLDKKIKSYANIQKKLLQAVYRFVSLFDWQGIPLLKKDGILVYCTCSLSVEENEAVIAWILHRHPEVELVQTLPQLGMKGLAHKDLEAEDQAVMQRFGPPLIPTDRNTDTIGFFICKLRKKYGEAPEIYIHPHLNDCIVIGPLLKLSQSVVHHPVQIIVDQPCALAVLRGADVFAPGVLAMPLGKNSYKTPYRRVQKTQNKQLYWV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030488 [BP]tRNA methylationprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0032259, GO:0008033, GO:0009987, GO:0006725, GO:0043412, GO:0043414, GO:0008152, GO:0001510, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0008150, GO:0006396
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M6W, chain A
Confidence level:very confident
Coverage over the Query: 62-149,160-210,222-314
View the alignment between query and template
View the model in PyMOL
Template: 2AS0, chain A
Confidence level:very confident
Coverage over the Query: 44-179,194-210,222-255
View the alignment between query and template
View the model in PyMOL
Template: 4FP9, chain A
Confidence level:probable
Coverage over the Query: 2-210,222-248
View the alignment between query and template
View the model in PyMOL
Template: 1Q7H, chain A
Confidence level:probable
Coverage over the Query: 344-378
View the alignment between query and template
View the model in PyMOL