Diaphorina citri psyllid: psy17828

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060-
MSDAWEEIQAIKSKRNSLREKLQKRKQERKDILERDGSLSPARNEEDSVDTSYQTEEDAIKLNPDLELELLEKLCDVSLTEEDAIKLNPDLELELLEKLCDVSLVLPITSQSLMGTLNQEYTHLCLINLLHKFATQKLITINESKDDDNQVEIVSVEHVKLLGMVNEVSKGIKRKADTDTSDYEDDEDLKKFKDNGDETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTRAECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDGAKIKGISDISDEGNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQDEGLLFLWVTGRAMELGRECLKLSLNCQLSQDVEFTWPYLGWMSKFSLHHFFQVVYLAAMIRSIIALHNLINNKITNRDAEVNIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAEKKEITKSKVEDKPQEDKKPEIKVNISSSAQASSMPASTSRITFLGYMDMAGETYGRYTHYVPALIMSVICNTRRVMFISHSGLVEVSKMVGQEVVTSKVVVHPLVLLSVVDHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEDKIRPEREPNPRPSANKAAIGKWKTNTTPNKAFLCGRSSRGGKVGRIRCRSHFSTTGVLSIRRIFNPIGTWTFIRIPTTTWPSRAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHDDGSPTTKTFDHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIKEIEKYVGQVSRYWPPFYVVVINLIDKRSVTHLSGPGRWLLPWGWSIMMWVLVGWGVLGIGWNSAHESSDHLQSTRHLQHVARHY
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHccccccccHHcccccHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHHHHHHcccccEEccccccccccEEEEEEHHHHHHcccccccccccccccccccccccHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEccccccccccccccEEEEEccccccccccccccccHHHHHcccccccccccEEEEEEccHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccHHcccccccccccccccccHHHHHHHccccccccccccccccccccccccHHHHccccccEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccEEEccHHHHHHHHccccHHHHHHcccccccccccccccccccEEEEccccHHHHHHHHHccccccccccEEEEEEEEECcccEEEEEEEEECccccccccccEEEEcHHHHHHHHHHHHHccccccEEEECccccccccccHHHHHHHHHHccccEEEEEccccccccccCEEEEEEcccccccccccccccccccccccccccccccccccEEcccccccCEEEEEEcccccccHHHHHHHHHcccccEEEEcccccccccccccEEEEECccccccccccHHHHHHHHHHccccEEEEEccccccccccCEEEEEEEEEcccccccCEEEEEECcccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHccHHHHHHHHHcc
**DAWEE*QA***********************************************************************EDAIKLNPDLELELLEKLCDVSLVLPITSQSLMGTLNQEYTHLCLINLLHKFATQKLITINESKDDDNQVEIVSVEHVKLLGMVNEV**********************************************************************************YCSHGTRAECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDGA*******************TKLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQDEGLLFLWVTGRAMELGRECLKLSLNCQLSQDVEFTWPYLGWMSKFSLHHFFQVVYLAAMIRSIIALHNLINNKITNRDAEVNIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKI*********************************************RITFLGYMDMAGETYGRYTHYVPALIMSVICNTRRVMFISHSGLVEVSKMVGQEVVTSKVVVHPLVLLSVVDHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDE*******************IGKWKTNTTPNKAFLCGRSSRGGKVGRIRCRSHFSTTGVLSIRRIFNPIGTWTFIRIPTTTWPSRAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEV****SPTTKTFDHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIKEIEKYVGQVSRYWPPFYVVVINLIDKRSVTHLSGPGRWLLPWGWSIMMWVLVGWGVLGIGWNSA*********T*HL*******
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MSDAWEExxxxxxxxxxxxxxxxxxxxxxxxxxxxDGSLSPARNEEDSVDTSYQTEEDAIKLNPDLELELLEKLCDVSLTEEDAIKLNPDLELELLEKLCDVSLVLPITSQSLMGTLNQEYTHLCLINLLHKFATQKLITINESKDDDNQVEIVSVEHVKLLGMVNEVSKGIKRKADTDTSDYEDDEDLKKFKDNGDETDVMSLLSKPSIREKQVKQIGEEILDLLTKPTAKERSLAERFRSQSGNQVQEYCSHGTRAECLRMKDTPNICTKLHFRKIIQCHTDESLGDCSFLNTCFHMDSCKYVHYEVDGAKIKGISDISDEGNKSLLEKTKLYPPQWIQCDLRYLDMTVLGKFAVIMADPPWDIHMELPYGTMSDDEMRQLGIPQLQDEGLLFLWVTGRAMELGRECLKLFMLQDEGLLFLWVTGRAMELGRECLKLSLNCQLSQDVEFTWPYLGWMSKFSLHHFFQVVYLAAMIRSIIALHNLINNKITNRDAEVNIEFNFSLQHFSQVVYLAAMIRSIIALHNLINNKITNRDAEKKEITKSKVEDKPQEDKKPEIKVNISSSAQASSMPASTSRITFLGYMDMAGETYGRYTHYVPALIMSVICNTRRVMFISHSGLVEVSKMVGQEVVTSKVVVHPLVLLSVVDHFNRMSKIGNQKRVVGVLLGCWKGKGILDVSNSFAVPFDEDDKDNSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEDKIRPEREPNPRPSANKAAIGKWKTNTTPNKAFLCGRSSRGGKVGRIRCRSHFSTTGVLSIRRIFNPIGTWTFIRIPTTTWPSRAREKVVGWYHTGPKLHQNDIQINELIRRYCTNSVLVIIDAKPKELGLPTEAYRVVDEVHDDGSPTTKTFDHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQRVTNQLMGLKGLNQQIKEIEKYVGQVSRYWPPFYVVVINLIDKRSVTHLSGPGRWLLPWGWSIMMWVLVGWGVLGIGWNSAHESSDHLQSTRHLQHVARHY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
26S proteasome regulatory subunit rpn8 Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.confidentO74440
26S proteasome regulatory subunit RPN8 Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.confidentQ75F44
26S proteasome non-ATPase regulatory subunit 7 Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.confidentQ54WI8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008283 [BP]cell proliferationprobableGO:0008150, GO:0044699
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006511 [BP]ubiquitin-dependent protein catabolic processprobableGO:0051603, GO:1901575, GO:0044265, GO:0044260, GO:0044267, GO:0019538, GO:0009056, GO:0009987, GO:0019941, GO:0044237, GO:0043170, GO:0044248, GO:0071704, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0006508, GO:0043632, GO:0044238, GO:0009057
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699
GO:0000022 [BP]mitotic spindle elongationprobableGO:0006996, GO:0044699, GO:0007017, GO:0007010, GO:0000278, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0000226, GO:0008150, GO:0007051, GO:0007052, GO:0022402, GO:0007049, GO:0044763, GO:0051231, GO:0016043
GO:0005635 [CC]nuclear envelopeprobableGO:0005575, GO:0005623, GO:0005634, GO:0044464, GO:0031967, GO:0031975, GO:0044446, GO:0043229, GO:0044428, GO:0012505, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0030425 [CC]dendriteprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0000502 [CC]proteasome complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2O95, chain A
Confidence level:very confident
Coverage over the Query: 632-773
View the alignment between query and template
View the model in PyMOL
Template: 2O95, chain A
Confidence level:very confident
Coverage over the Query: 806-955
View the alignment between query and template
View the model in PyMOL
Template: 4B4T, chain U
Confidence level:very confident
Coverage over the Query: 633-762,904-986
View the alignment between query and template
View the model in PyMOL
Template: 1G60, chain A
Confidence level:probable
Coverage over the Query: 339-438
View the alignment between query and template
View the model in PyMOL