Diaphorina citri psyllid: psy17879

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----

MNVVTFKDLIQPYSLFNLHPQLTLFSTFTVSNGSIYDLHSNIHPHHHVPNGGAPELPVSSTYAGSLGYAASYSNHIQRSLPNMSQPMSLEPPKIYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHcccHHHHHccHHHHHHHHHHHcccc

**VVTFKDLIQPYSLFNLHPQLTLFSTFTVSNGSIYDLHSNIHP************************************************KIYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF

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MNVVTFKDLIQPYSLFNLHPQLTLFSTFTVSNGSIYDLHSNIHPHHHVPNGGAPELPVSSTYAGSLGYAASYSNHIQRSLPNMSQPMSLEPPKIYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Actin-binding LIM protein 3	May act as scaffold protein. May stimulate ABRA activity and ABRA-dependent SRF transcriptional activity.	confident	O94929
Actin-binding LIM protein 3	May act as scaffold protein. May stimulate ABRA activity and ABRA-dependent SRF transcriptional activity.	confident	Q69ZX8

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0048522 [BP]	positive regulation of cellular process	probable	GO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0045111 [CC]	intermediate filament cytoskeleton	probable	GO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0030016 [CC]	myofibril	probable	GO:0005737, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0015629 [CC]	actin cytoskeleton	probable	GO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0007411 [BP]	axon guidance	probable	GO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UJS, chain A
Confidence level:very confident
Coverage over the Query: 92-154
View the alignment between query and template
View the model in PyMOL