Diaphorina citri psyllid: psy17953


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230----
MIKITKWWLCPKDRRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSNLSVLALVVVRKGEQEIPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKAPKIQRLITPVTLQRKRHLLALKKRRCLKRKEQAAEYAKLLAIRIKEKKKAKEDERKRRRSSSLRLSTASSEPAAKKPAPAAPVTKAAPAPAAQAKGAKGAAAAPVGPTNLP
cccccccCEcccccEEEEEEcccccccccccccccccCEEEEEEEcccccEEEEEEEEccccccccccccccccccccccccHHHHHccccccccccccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHccccccccccccccccc
*IKITKWWLCPKDRRVRLLLSKGHSCYRP**TGERKRKSVRGCIVDSNLSVLALVVVRKGEQEIPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIK****************KLYKAPKIQRLITPVTLQRKRHLLALKKRRCLKRKEQAAEYAKLLAIRI*******************************************************************
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MIKITKWWLCPKDRRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSNLSVLALVVVRKGEQEIPGLTDTTIPRRLGPKRASKIRKLFNLSKEDDVRQYVIKRTLPPKPAKEGKKKVRKLYKAPKIQRLITPVTLQRKRHLLALKKRRCLKRKEQAAEYAKLLAIRIKEKKKAKEDERKRRRSSSLRLSTASSEPAAKKPAPAAPVTKAAPAPAAQAKGAKGAAAAPVGPTNLP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
40S ribosomal protein S6 May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA.very confidentP47838
40S ribosomal protein S6 May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA.very confidentP62754
40S ribosomal protein S6 May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA.very confidentP62755

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022627 [CC]cytosolic small ribosomal subunitprobableGO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0015935, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0044424, GO:0032991, GO:0043228, GO:0030529, GO:0043226, GO:0044422, GO:0005840
GO:0000003 [BP]reproductionprobableGO:0008150
GO:0030686 [CC]90S preribosomeprobableGO:0032991, GO:0044464, GO:0030684, GO:0005623, GO:0030529, GO:0005575, GO:0044424, GO:0005622
GO:0007275 [BP]multicellular organismal developmentprobableGO:0032502, GO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0003735 [MF]structural constituent of ribosomeprobableGO:0003674, GO:0005198
GO:0044767 [BP]single-organism developmental processprobableGO:0032502, GO:0008150, GO:0044699
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576
GO:0043065 [BP]positive regulation of apoptotic processprobableGO:0050794, GO:0050789, GO:0048518, GO:0043067, GO:0065007, GO:0010942, GO:0008150, GO:0010941, GO:0042981, GO:0043068, GO:0048522
GO:0006364 [BP]rRNA processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0006139, GO:0044260, GO:0042254, GO:0071704, GO:0010467, GO:0071840, GO:0022613, GO:0034470, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0016072, GO:0044237, GO:0043170, GO:0044085, GO:0006396
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0042274 [BP]ribosomal small subunit biogenesisprobableGO:0022613, GO:0044085, GO:0008150, GO:0042254, GO:0071840
GO:0043933 [BP]macromolecular complex subunit organizationprobableGO:0008150, GO:0071840, GO:0016043
GO:0009506 [CC]plasmodesmaprobableGO:0055044, GO:0005575, GO:0030054, GO:0005911
GO:0031929 [BP]TOR signaling cascadeprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0035556, GO:0050789, GO:0044699
GO:0032040 [CC]small-subunit processomeprobableGO:0032991, GO:0044464, GO:0030684, GO:0005623, GO:0030529, GO:0005575, GO:0044424, GO:0005622
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3U5C, chain G
Confidence level:very confident
Coverage over the Query: 4-168
View the alignment between query and template
View the model in PyMOL