Diaphorina citri psyllid: psy17980

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250--
MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA
cccccccEEEEcccccHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHcccccEECcccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccccccEEEEEEccCEEccccccEEEEEcccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
****NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTS*GEIL*
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MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dynein heavy chain 6, axonemal Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.confidentQ9C0G6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005874 [CC]microtubuleprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0017111 [MF]nucleoside-triphosphatase activityprobableGO:0016787, GO:0016818, GO:0003824, GO:0016817, GO:0016462, GO:0003674
GO:0005938 [CC]cell cortexprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0071944, GO:0044424
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0035085 [CC]cilium axonemeprobableGO:0005737, GO:0005575, GO:0044463, GO:0043231, GO:0032838, GO:0031514, GO:0044441, GO:0044464, GO:0043229, GO:0005623, GO:0043226, GO:0044446, GO:0044444, GO:0097014, GO:0005929, GO:0044424, GO:0042995, GO:0043227, GO:0005930, GO:0044422, GO:0005622

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3vkg, chain A very confident Alignment | Template Structure