Psyllid ID: psy17980

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250--
Protein Sequence
MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA
Secondary Structure (PSIPRED)
cccccccEEEEcccccHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHcccccEEEcccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccccccEEEEEEccEEEccccccEEEEEcccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHcccEEEEccccEEEcccHEEccHHHHHcHcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccEEEEEEEccccccHHHEcccEEEEcccEEEEEEccccEEcccccEEEEEEccccccccccEEEEEEEEEEEEccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mespnglkilkltDSTYMRTMEACVRLGLpvlledvgetldpalgpillkqtytkgktprrsyadqAYIHGMVFTNRACKMTKGFLSVCFLSEIKIwtrnshhgslfydetRYCALSEGGHILFSlctsgphsppmnltnffyppsggrtliklgdtvvdydpkfRLYLttklpnphylpetcIQIGLINFTVTSSGLEEQLMADVVRlerpdleqERNQVIVTMNKDKSMLKEIEDNILRLLFtsegeila
Flexible Loop (DISEMBL)
mespnglkilkltdSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILlkqtytkgktprrsYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRlerpdleqernqvivtmnkdksmlkEIEDNILrllftsegeila
Low Complexity Region (SEG)
MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA
Disordered region (IsUnstruct)
*******KILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRL***********VIVTM*****MLKEIEDNILRLLFT*******
Disordered Region (DISOPRED)
****NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTS*GEIL*
Disordered Region (DISEMBL)
MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA
Disordered Region (DISPRO)
****NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTS******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	252	2.2.26 [Sep-21-2011]
Q9C0G6	4158	Dynein heavy chain 6, axo	yes	N/A	0.484	0.029	0.604	1e-37
Q8WXX0	4024	Dynein heavy chain 7, axo	no	N/A	0.420	0.026	0.528	2e-27
Q63170	4057	Dynein heavy chain 7, axo	no	N/A	0.420	0.026	0.528	2e-27
Q9P2D7	4330	Dynein heavy chain 1, axo	no	N/A	0.400	0.023	0.564	2e-26
Q63164	4516	Dynein heavy chain 1, axo	no	N/A	0.400	0.022	0.564	2e-26
P0C6F1	4456	Dynein heavy chain 2, axo	no	N/A	0.416	0.023	0.514	7e-26
Q9P225	4427	Dynein heavy chain 2, axo	no	N/A	0.416	0.023	0.485	3e-24
Q9MBF8	4513	Dynein-1-beta heavy chain	N/A	N/A	0.412	0.023	0.514	1e-23
P39057	4466	Dynein beta chain, ciliar	N/A	N/A	0.400	0.022	0.544	3e-23
P23098	4466	Dynein beta chain, ciliar	N/A	N/A	0.400	0.022	0.544	4e-23

>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3

 Score =  156 bits (394), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 96/124 (77%), Gaps = 2/124 (1%)

Query: 128  TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
            T  P   P+ L   F   SGGR LI+LGD+ +DYD  FR Y+TTK+PNPHYLPE CI++ 
Sbjct: 3130 TLDPALEPILLKQIFI--SGGRLLIRLGDSDIDYDKNFRFYMTTKMPNPHYLPEVCIKVT 3187

Query: 188  LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
            +INFTVT SGLE+QL++DVVRLE+P LE++R ++IV +N DK+ LK IE+ ILR+LFTSE
Sbjct: 3188 IINFTVTKSGLEDQLLSDVVRLEKPRLEEQRIKLIVRINTDKNQLKTIEEKILRMLFTSE 3247

Query: 248  GEIL 251
            G IL
Sbjct: 3248 GNIL 3251

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.
Homo sapiens (taxid: 9606)

>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 78/106 (73%)

Query: 146  SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
             GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+NF +T  G+++QL+  
Sbjct: 3058 QGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGI 3117

Query: 206  VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG IL
Sbjct: 3118 VVAQERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNIL 3163

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Homo sapiens (taxid: 9606)

>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2 SV=2

 Score =  122 bits (306), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 78/106 (73%)

Query: 146  SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
             GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+NF +T  G+++QL+  
Sbjct: 3091 QGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGI 3150

Query: 206  VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG IL
Sbjct: 3151 VVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNIL 3196

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Rattus norvegicus (taxid: 10116)

>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 76/101 (75%)

Query: 148  GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
            G T++KLGDTV+ Y   FR+Y+TTKLPNPHY PE   ++ LINFT++ SGLE+QL+  VV
Sbjct: 3368 GNTVLKLGDTVIPYHEDFRMYITTKLPNPHYTPEISTKLTLINFTLSPSGLEDQLLGQVV 3427

Query: 208  RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEG 248
              ERPDLE+ +NQ+I++  K +  LK+IED IL  L +SEG
Sbjct: 3428 AEERPDLEEAKNQLIISNAKMRQELKDIEDQILYRLSSSEG 3468

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2 SV=2

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 76/101 (75%)

Query: 148  GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
            G T++KLGDTV+ Y   FR+Y+TTKLPNPHY PE   ++ LINFT++ SGLE+QL+  VV
Sbjct: 3554 GNTVLKLGDTVIPYHEDFRMYITTKLPNPHYSPEVSTKLTLINFTLSPSGLEDQLLGQVV 3613

Query: 208  RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEG 248
              ERPDLE+ +NQ+I++  K +  LK+IED IL  L +SEG
Sbjct: 3614 AEERPDLEEAKNQLIISNAKMRQELKDIEDQILYRLSSSEG 3654

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Rattus norvegicus (taxid: 10116)

>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1

 Score =  117 bits (293), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 74/105 (70%)

Query: 147  GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
            GGR LI++GD  V+Y+P FR YLTTKL NPHY PET  +  ++NF V   GLE QL+  V
Sbjct: 3492 GGRMLIRIGDKEVEYNPNFRFYLTTKLSNPHYNPETSAKTTIVNFAVKEQGLEAQLLGIV 3551

Query: 207  VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            VR ERP+LE++++ +++ +   K  LKE+ED ILRLL  + G +L
Sbjct: 3552 VRKERPELEEQKDSLVINIAAGKRKLKELEDEILRLLNEATGSLL 3596

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Mus musculus (taxid: 10090)

>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3

 Score =  112 bits (279), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 73/105 (69%)

Query: 147  GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
            GGR L+++GD  V+Y+  FR Y+TTKL NPHY PET  +  ++NF V   GLE QL+  V
Sbjct: 3463 GGRLLMRIGDKEVEYNTNFRFYITTKLSNPHYSPETSAKTTIVNFAVKEQGLEAQLLGIV 3522

Query: 207  VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            VR ERP+LE++++ +++ +   K  LKE+ED ILRLL  + G +L
Sbjct: 3523 VRKERPELEEQKDSLVINIAAGKRKLKELEDEILRLLNEATGSLL 3567

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Homo sapiens (taxid: 9606)

>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 72/105 (68%)

Query: 147  GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
            G +TLIKLGD  VDY+  FRLYLTTKL NP Y PE   ++ ++NF V   GLE QL+A V
Sbjct: 3549 GNQTLIKLGDKEVDYNFDFRLYLTTKLANPLYTPEISTKVMIVNFAVKEQGLEAQLLATV 3608

Query: 207  VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            V+ ERPDL++++N ++V +   K    E+ED IL LL T+ G +L
Sbjct: 3609 VKNERPDLDKQKNDLVVKVAAGKRTQAELEDTILHLLSTATGSLL 3653

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for assembly of the I1 inner arm complex and its targeting to the appropriate axoneme location. Also required for phototaxis.

Chlamydomonas reinhardtii (taxid: 3055)

>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 71/101 (70%)

Query: 152  IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
            IK+GD  V+Y+P+FRL L TKL NPHY PE   Q  LINFTVT  GLE+QL+A+VV  ER
Sbjct: 3516 IKIGDKEVEYNPEFRLILQTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLANVVAQER 3575

Query: 212  PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA 252
            PDLE+ ++ +    N  K +LKE+EDN+L  L ++EG  L 
Sbjct: 3576 PDLEKLKSDLTKQQNDFKIILKELEDNLLSRLSSAEGNFLG 3616

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Anthocidaris crassispina (taxid: 7629)

>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1

 Score =  108 bits (270), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%)

Query: 152  IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
            IK+GD  V+Y+P FRL L TKL NPHY PE   Q  LINFTVT  GLE+QL+A+VV  ER
Sbjct: 3516 IKIGDKEVEYNPDFRLILQTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLANVVAQER 3575

Query: 212  PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEILA 252
            PDLE+ ++ +    N  K +LKE+EDN+L  L ++EG  L 
Sbjct: 3576 PDLEKLKSDLTKQQNDFKIILKELEDNLLSRLSSAEGNFLG 3616

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Tripneustes gratilla (taxid: 7673)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
301611982	4069	PREDICTED: dynein heavy chain 6, axonema	0.420	0.026	0.698	4e-39
326663948	3988	PREDICTED: dynein heavy chain 6, axonema	0.484	0.030	0.620	1e-37
194220540	4151	PREDICTED: dynein heavy chain 6, axonema	0.484	0.029	0.620	3e-37
444725018	3879	Dynein heavy chain 6, axonemal [Tupaia c	0.484	0.031	0.612	5e-37
345323579	2776	PREDICTED: dynein heavy chain 6, axonema	0.472	0.042	0.619	6e-37
326436014	4164	dynein heavy chain 6 [Salpingoeca sp. AT	0.484	0.029	0.604	1e-36
156356375	3894	predicted protein [Nematostella vectensi	0.472	0.030	0.636	1e-36
431899718	2278	Dynein heavy chain 6, axonemal [Pteropus	0.472	0.052	0.628	2e-36
390353710	4188	PREDICTED: dynein heavy chain 6, axonema	0.484	0.029	0.612	2e-36
297469251	747	PREDICTED: dynein heavy chain 6, axonema	0.484	0.163	0.604	2e-36

>gi|301611982|ref|XP_002935499.1| PREDICTED: dynein heavy chain 6, axonemal-like [Xenopus (Silurana) tropicalis]

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 74/106 (69%), Positives = 93/106 (87%)

Query: 146  SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
            SGGRTLI+LGD+ +DYD  FR Y+TTK+PNPHYLPE CI++ +INFTVT SGLE+QL++D
Sbjct: 3153 SGGRTLIRLGDSDIDYDKNFRFYMTTKMPNPHYLPEVCIKVTIINFTVTRSGLEDQLLSD 3212

Query: 206  VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            VVR+ERPDLE++RNQ+I+ +N DK+ LK IED IL+LLFTSEG IL
Sbjct: 3213 VVRIERPDLEEQRNQLIIRINSDKNQLKAIEDRILKLLFTSEGNIL 3258

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326663948|ref|XP_001921252.3| PREDICTED: dynein heavy chain 6, axonemal [Danio rerio]

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 98/124 (79%), Gaps = 2/124 (1%)

Query: 128  TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
            T  P   P+ L   F   SGGRTLI+LGD+ +DYD  FR Y+TTK+ NPHYLPE CI++ 
Sbjct: 3139 TLDPALEPILLKQTFV--SGGRTLIRLGDSDIDYDKNFRFYMTTKMANPHYLPEVCIKVT 3196

Query: 188  LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
            +INFTVT SGLE+Q+++DVVRLERPDLE++R+Q+IV +N D++ LK IED IL+LLFTSE
Sbjct: 3197 IINFTVTKSGLEDQILSDVVRLERPDLEEQRSQLIVRINADRNQLKAIEDRILKLLFTSE 3256

Query: 248  GEIL 251
            G IL
Sbjct: 3257 GNIL 3260

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194220540|ref|XP_001916921.1| PREDICTED: dynein heavy chain 6, axonemal [Equus caballus]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 98/124 (79%), Gaps = 2/124 (1%)

Query: 128  TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
            T  P   P+ L   F   SGGR LI+LGD+ +DYD  FR Y+TTKLPNPHYLPE CI++ 
Sbjct: 3123 TLDPALEPILLKQTFI--SGGRLLIRLGDSDIDYDKNFRFYMTTKLPNPHYLPEVCIKVT 3180

Query: 188  LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
            +INFTVT SGLE+QL++DVVRLE+P+LE++RN++IV +N DK+ LK IE+ ILR+LFTSE
Sbjct: 3181 IINFTVTKSGLEDQLLSDVVRLEKPELEEQRNKLIVRINTDKNQLKAIEEKILRMLFTSE 3240

Query: 248  GEIL 251
            G IL
Sbjct: 3241 GNIL 3244

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|444725018|gb|ELW65599.1| Dynein heavy chain 6, axonemal [Tupaia chinensis]

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 2/124 (1%)

Query: 128  TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
            T  P   P+ L   F   SGGR LI+LGD+ +DYD  FR Y+TTK+PNPHYLPE CI++ 
Sbjct: 2851 TLDPALEPILLKQTFL--SGGRLLIRLGDSDIDYDKNFRFYMTTKMPNPHYLPEVCIKVT 2908

Query: 188  LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
            +INFTVT SGLE+QL++DVVRLE+P+LE++RN++IV +N DK+ LK IE+ ILR+LFTSE
Sbjct: 2909 IINFTVTKSGLEDQLLSDVVRLEKPELEEQRNKLIVRINTDKNQLKSIEEKILRMLFTSE 2968

Query: 248  GEIL 251
            G IL
Sbjct: 2969 GNIL 2972

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345323579|ref|XP_003430723.1| PREDICTED: dynein heavy chain 6, axonemal-like [Ornithorhynchus anatinus]

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 97/121 (80%), Gaps = 2/121 (1%)

Query: 131  PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
            P   P+ L   F   SGGRTLI+LGD+ +DYD  F+ Y+TTK+PNPHYLPE CI++ +IN
Sbjct: 2211 PALEPVLLKQTFV--SGGRTLIRLGDSDIDYDRNFKFYMTTKMPNPHYLPEVCIKVTIIN 2268

Query: 191  FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
            FTVT SGLE+QL++DVVRLE+PDLE++R Q+IV +N DK+ LK IED IL++LFT+EG I
Sbjct: 2269 FTVTRSGLEDQLLSDVVRLEKPDLEEQRIQLIVRINTDKNQLKSIEDKILKMLFTTEGNI 2328

Query: 251  L 251
            L
Sbjct: 2329 L 2329

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326436014|gb|EGD81584.1| dynein heavy chain 6 [Salpingoeca sp. ATCC 50818]

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 96/124 (77%), Gaps = 2/124 (1%)

Query: 128  TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
            T  P   P+ L   F    GGRTLI+LGD+ +DYD  FR Y+TTK+ NPHYLPE CI++ 
Sbjct: 3156 TLDPSLEPILLKQTF--KQGGRTLIRLGDSDIDYDKNFRFYMTTKMANPHYLPEICIKVT 3213

Query: 188  LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
            +INFTVT +GLE+QL+ADVVRLERPDLE+ER ++I+ +N+D++ LK IED IL+LLF SE
Sbjct: 3214 IINFTVTKTGLEDQLLADVVRLERPDLEEERTKLILQINEDRAQLKSIEDEILKLLFNSE 3273

Query: 248  GEIL 251
            G IL
Sbjct: 3274 GNIL 3277

Source: Salpingoeca sp. ATCC 50818

Species: Salpingoeca sp. ATCC 50818

Genus: Salpingoeca

Family: Salpingoecidae

Order: Choanoflagellida

Superkingdom: Eukaryota

>gi|156356375|ref|XP_001623900.1| predicted protein [Nematostella vectensis] gi|156210641|gb|EDO31800.1| predicted protein [Nematostella vectensis]

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 93/121 (76%), Gaps = 2/121 (1%)

Query: 131  PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
            P   P+ L   F    GGR LI+LGD+ +DYD  FR Y+TTKL NPHYLPE CI++ +IN
Sbjct: 2886 PALEPILLKQTFV--QGGRLLIRLGDSDIDYDKNFRFYMTTKLANPHYLPEVCIKVTIIN 2943

Query: 191  FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
            FTVT SGLE+QL++DVVRLERPDLE +RNQ+IV +N DK+ LK IED IL+LLF SEG I
Sbjct: 2944 FTVTKSGLEDQLLSDVVRLERPDLEDQRNQLIVRINSDKNQLKAIEDRILKLLFHSEGNI 3003

Query: 251  L 251
            L
Sbjct: 3004 L 3004

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|431899718|gb|ELK07669.1| Dynein heavy chain 6, axonemal [Pteropus alecto]

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/121 (62%), Positives = 96/121 (79%), Gaps = 2/121 (1%)

Query: 131  PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
            P   P+ L   F   SGGR LI+LGD+ +DYD  FR Y+TTKLPNPHYLPE CI++ +IN
Sbjct: 1630 PALEPILLKQTFL--SGGRLLIRLGDSDIDYDKNFRFYMTTKLPNPHYLPEVCIKVTIIN 1687

Query: 191  FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
            FTVT SGLE+QL++DVVRLE+P+LE++R ++IV +N DK+ LK IED ILR+LFTSEG I
Sbjct: 1688 FTVTKSGLEDQLLSDVVRLEKPELEEQRIKLIVRINADKNQLKTIEDKILRMLFTSEGNI 1747

Query: 251  L 251
            L
Sbjct: 1748 L 1748

Source: Pteropus alecto

Species: Pteropus alecto

Genus: Pteropus

Family: Pteropodidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390353710|ref|XP_786228.3| PREDICTED: dynein heavy chain 6, axonemal-like [Strongylocentrotus purpuratus]

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 95/124 (76%), Gaps = 2/124 (1%)

Query: 128  TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
            T  P   P+ L   F    GGR LI+LGD+ +DYD  FR Y+T+K+ NPHYLPE CI++ 
Sbjct: 3142 TLDPALEPILLKQTFV--QGGRLLIRLGDSDIDYDKNFRFYMTSKMANPHYLPEICIKVT 3199

Query: 188  LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
            +INFTVT SGLE+QL++DVVRLERPDLE++RNQ+IV +N DK+ LK IED IL+LLF SE
Sbjct: 3200 IINFTVTKSGLEDQLLSDVVRLERPDLEEQRNQLIVRINADKNQLKAIEDRILKLLFESE 3259

Query: 248  GEIL 251
            G IL
Sbjct: 3260 GNIL 3263

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|297469251|ref|XP_608502.5| PREDICTED: dynein heavy chain 6, axonemal-like, partial [Bos taurus]

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 97/124 (78%), Gaps = 2/124 (1%)

Query: 128 TSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIG 187
           T  P   P+ L   F   SGGR LI+LGD+ +DYD  FR Y+TTKLPNPHYLPE CI++ 
Sbjct: 553 TLDPALEPILLKQTFV--SGGRLLIRLGDSDIDYDKNFRFYMTTKLPNPHYLPEVCIKVT 610

Query: 188 LINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSE 247
           +INFTVT SGLE+QL++DVVRLE+P+LE++R ++IV +N DK+ LK IE+ IL++LFTSE
Sbjct: 611 IINFTVTKSGLEDQLLSDVVRLEKPELEEQRIKLIVRINTDKNQLKAIEEKILKMLFTSE 670

Query: 248 GEIL 251
           G IL
Sbjct: 671 GNIL 674

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
UNIPROTKB|F1LXT8	1773	Dnahc6 "Protein Dnahc6" [Rattu	0.472	0.067	0.628	1.3e-50
FB|FBgn0013809	4081	Dhc16F "Dynein heavy chain at	0.412	0.025	0.605	3.1e-44
UNIPROTKB|J9NS43	3346	DNAH7 "Uncharacterized protein	0.472	0.035	0.504	9.9e-41
UNIPROTKB|F1N5R7	4024	DNAH7 "Uncharacterized protein	0.472	0.029	0.504	1.2e-40
UNIPROTKB|J9P9Z9	4023	DNAH7 "Uncharacterized protein	0.472	0.029	0.504	1.5e-40
UNIPROTKB|F1PUS6	4026	DNAH7 "Uncharacterized protein	0.472	0.029	0.504	1.5e-40
UNIPROTKB|H7C563	928	DNAH1 "Dynein heavy chain 1, a	0.400	0.108	0.564	2e-40
RGD|621798	4057	Dnah7 "dynein, axonemal, heavy	0.472	0.029	0.495	4e-40
UNIPROTKB|F1LS28	4057	Dnah7 "Dynein heavy chain 7, a	0.472	0.029	0.495	4e-40
UNIPROTKB|Q63170	4057	Dnah7 "Dynein heavy chain 7, a	0.472	0.029	0.495	4e-40

UNIPROTKB|F1LXT8 Dnahc6 "Protein Dnahc6" [Rattus norvegicus (taxid:10116)]

 Score = 393 (143.4 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
 Identities = 76/121 (62%), Positives = 95/121 (78%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F   SGGR LI+LGD+ +DYD  FR Y+TTK+PNPHYLPE CI++ +IN
Sbjct:   756 PALEPILLKQTFM--SGGRLLIRLGDSDIDYDKSFRFYMTTKMPNPHYLPEVCIKVTIIN 813

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             FTVT SGLE+QL++DVVRLE+P+LE +R Q+IV +N DK+ LK IED IL+LLFTSEG I
Sbjct:   814 FTVTKSGLEDQLLSDVVRLEKPELEGQRVQLIVRINSDKNQLKSIEDKILKLLFTSEGNI 873

Query:   251 L 251
             L
Sbjct:   874 L 874

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

FB|FBgn0013809 Dhc16F "Dynein heavy chain at 16F" [Drosophila melanogaster (taxid:7227)]

 Score = 354 (129.7 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
 Identities = 63/104 (60%), Positives = 81/104 (77%)

Query:   148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
             GRT +KLGD V+DYD  F+LY+TTKLPNPHYLPE CI + L+NF VT SGLE+QL+AD+V
Sbjct:  3083 GRTYLKLGDMVIDYDDNFKLYMTTKLPNPHYLPEVCINVTLVNFLVTESGLEDQLLADIV 3142

Query:   208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
              +E P +E +RN ++V +N DK  L  +ED +L+LLF SEG IL
Sbjct:  3143 AIELPAMEIQRNDLVVKINSDKQQLLALEDKVLKLLFNSEGNIL 3186

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0005858 "axonemal dynein complex" evidence=ISS

GO:0003774 "motor activity" evidence=ISS

GO:0042623 "ATPase activity, coupled" evidence=ISS

GO:0007018 "microtubule-based movement" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

UNIPROTKB|J9NS43 DNAH7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 310 (114.2 bits), Expect = 9.9e-41, Sum P(2) = 9.9e-41
 Identities = 61/121 (50%), Positives = 84/121 (69%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  2367 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLN 2424

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +TS G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  2425 FMITSEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 2484

Query:   251 L 251
             L
Sbjct:  2485 L 2485

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

UNIPROTKB|F1N5R7 DNAH7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 312 (114.9 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 61/121 (50%), Positives = 84/121 (69%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  3045 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYSPDFRFYITTKLRNPHYLPETSVKVTLLN 3102

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +TS G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  3103 FMITSEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 3162

Query:   251 L 251
             L
Sbjct:  3163 L 3163

GO:0005929 "cilium" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

UNIPROTKB|J9P9Z9 DNAH7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 310 (114.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
 Identities = 61/121 (50%), Positives = 84/121 (69%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  3044 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLN 3101

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +TS G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  3102 FMITSEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 3161

Query:   251 L 251
             L
Sbjct:  3162 L 3162

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

UNIPROTKB|F1PUS6 DNAH7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 310 (114.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
 Identities = 61/121 (50%), Positives = 84/121 (69%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  3047 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLN 3104

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +TS G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  3105 FMITSEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 3164

Query:   251 L 251
             L
Sbjct:  3165 L 3165

GO:0005524 "ATP binding" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0001539 "ciliary or flagellar motility" evidence=IEA

UNIPROTKB|H7C563 DNAH1 "Dynein heavy chain 1, axonemal" [Homo sapiens (taxid:9606)]

 Score = 298 (110.0 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
 Identities = 57/101 (56%), Positives = 76/101 (75%)

Query:   148 GRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVV 207
             G T++KLGDTV+ Y   FR+Y+TTKLPNPHY PE   ++ LINFT++ SGLE+QL+  VV
Sbjct:   203 GNTVLKLGDTVIPYHEDFRMYITTKLPNPHYTPEISTKLTLINFTLSPSGLEDQLLGQVV 262

Query:   208 RLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEG 248
               ERPDLE+ +NQ+I++  K +  LK+IED IL  L +SEG
Sbjct:   263 AEERPDLEEAKNQLIISNAKMRQELKDIEDQILYRLSSSEG 303

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

RGD|621798 Dnah7 "dynein, axonemal, heavy chain 7" [Rattus norvegicus (taxid:10116)]

 Score = 305 (112.4 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
 Identities = 60/121 (49%), Positives = 83/121 (68%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  3078 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLN 3135

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +T  G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  3136 FMITPEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 3195

Query:   251 L 251
             L
Sbjct:  3196 L 3196

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005929 "cilium" evidence=ISO

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0035085 "cilium axoneme" evidence=IEA

UNIPROTKB|F1LS28 Dnah7 "Dynein heavy chain 7, axonemal" [Rattus norvegicus (taxid:10116)]

 Score = 305 (112.4 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
 Identities = 60/121 (49%), Positives = 83/121 (68%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  3078 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLN 3135

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +T  G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  3136 FMITPEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 3195

Query:   251 L 251
             L
Sbjct:  3196 L 3196

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

UNIPROTKB|Q63170 Dnah7 "Dynein heavy chain 7, axonemal" [Rattus norvegicus (taxid:10116)]

 Score = 305 (112.4 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
 Identities = 60/121 (49%), Positives = 83/121 (68%)

Query:   131 PHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLIN 190
             P   P+ L   F    GG T I+LGD+ ++Y P FR Y+TTKL NPHYLPET +++ L+N
Sbjct:  3078 PILEPLLLKQTF--KQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLN 3135

Query:   191 FTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEI 250
             F +T  G+++QL+  VV  ERPDLE+E+  +I+   ++K  LKEIED IL +L +SEG I
Sbjct:  3136 FMITPEGMQDQLLGIVVARERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNI 3195

Query:   251 L 251
             L
Sbjct:  3196 L 3196

GO:0001539 "ciliary or flagellar motility" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005858 "axonemal dynein complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C0G6	DYH6_HUMAN	No assigned EC number	0.6048	0.4841	0.0293	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	252
pfam12781	228	pfam12781, AAA_9, ATP-binding dynein motor region	8e-31
pfam12781	228	pfam12781, AAA_9, ATP-binding dynein motor region	3e-06

>gnl|CDD|193257 pfam12781, AAA_9, ATP-binding dynein motor region D5

 Score =  113 bits (284), Expect = 8e-31
 Identities = 55/100 (55%), Positives = 70/100 (70%)

Query: 152 IKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLER 211
           IK+GD  V+Y+PKFRL L TKL NPHY PE   Q  LINFTVT  GLE+QL+A VV  ER
Sbjct: 109 IKIGDKEVEYNPKFRLILHTKLANPHYKPEMQAQCTLINFTVTRDGLEDQLLAAVVAKER 168

Query: 212 PDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
           PDLEQ ++ +    N+ K +LKE+ED++L  L ++ G  L
Sbjct: 169 PDLEQLKSDLTKQQNEFKIVLKELEDSLLSRLSSASGNFL 208

The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This particular family is the D5 ATP-binding region of the motor, but has lost its P-loop. Length = 228

>gnl|CDD|193257 pfam12781, AAA_9, ATP-binding dynein motor region D5

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 16/51 (31%), Positives = 32/51 (62%)

Query: 7   LKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGK 57
           L+++++    Y+  +E  +  G  VL+E++ E++DP L P+L + T  KG+
Sbjct: 57  LRVIRIGQKGYLDVIEQAISEGDTVLIENIEESIDPVLDPLLGRNTIKKGR 107

The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This particular family is the D5 ATP-binding region of the motor, but has lost its P-loop. Length = 228

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	252
PF12781	228	AAA_9: ATP-binding dynein motor region D5; PDB: 3V	100.0
KOG3595|consensus	1395		99.93
COG5245	3164	DYN1 Dynein, heavy chain [Cytoskeleton]	99.36
PF03028	707	Dynein_heavy: Dynein heavy chain and region D6 of	93.33

>PF12781 AAA_9: ATP-binding dynein motor region D5; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A

Probab=100.00  E-value=6.5e-45  Score=323.14  Aligned_cols=156  Identities=51%  Similarity=0.916  Sum_probs=140.2

Q ss_pred             CCCceEeeCCChhHHHHHHHHHHcCCeEEEecCCCCcCccchhhhhhhhhcCCCCCccccchhhhhcccccchhhhhccc
Q psy17980          4 PNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTK   83 (252)
Q Consensus         4 ~~~l~~~~~~~~~~~~~~e~~i~~G~~~lie~~~e~~dp~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (252)
                      ++++.|+++++++|++++|+|+|+|.|||||||+|.+||+|+|+|.|++++                             
T Consensus        54 ~~~l~v~~~~~~~~~~~le~air~G~~llIe~v~e~~dp~l~plL~k~~~~-----------------------------  104 (228)
T PF12781_consen   54 KNDLEVTSFSDSNFLKQLENAIRFGKPLLIENVGESLDPILDPLLRKNIIK-----------------------------  104 (228)
T ss_dssp             CCCEEEEETTSTCHHHHHHHHHHCT-EEEEC-GCSCHHCTCHHHHTTT-EE-----------------------------
T ss_pred             hhcccccccchHhHHHHHHHHHHcCCeeeecccccccChhhhhhhcchhcc-----------------------------
Confidence            467999999999999999999999999999999999999999999999887                             


Q ss_pred             cccchhhhhhhhhhhccCCCCCcccccccccccccCccccccccCCCCCCCCCCCCCcccCCCCCeEEEEeCCeeeeeCC
Q psy17980         84 GFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDP  163 (252)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~veynp  163 (252)
                                                                                    +| + +|++||+.|+|+|
T Consensus       105 --------------------------------------------------------------~g-~-~i~igd~~v~~~~  120 (228)
T PF12781_consen  105 --------------------------------------------------------------SG-K-FIKIGDKEVDYNP  120 (228)
T ss_dssp             ---------------------------------------------------------------S-S-EEESSSSEEE--S
T ss_pred             --------------------------------------------------------------CC-c-eEEecCeEEEeec
Confidence                                                                          32 3 6899999999999


Q ss_pred             CceEEEeecCCCCCCChhhcceeEEEEeeeChhhHHHHHHHHHHhhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17980        164 KFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLL  243 (252)
Q Consensus       164 nFRLYLtTKL~nPhy~PEV~SkvTVINFTVT~eGLEeQLLsiVV~~ErPELEeqR~eLike~ae~K~~Lk~LED~LL~~L  243 (252)
                      +|||||+|+++||||+|+++++|++|||++|++|||+|||+.+|+.|+|+||++|.+|+++.+++|.+|+++|++||+.|
T Consensus       121 ~FrL~L~T~~~~p~~~pe~~s~vtviNFtvt~~gLe~qll~~vv~~e~PeLe~~r~~L~~~~~~~k~~L~~lEd~lL~~L  200 (228)
T PF12781_consen  121 NFRLYLTTKLPNPHYPPEVSSKVTVINFTVTQEGLEDQLLSIVVKHERPELEEQRNELLKEIAENKIQLKELEDQLLELL  200 (228)
T ss_dssp             S-EEEEEESSTTSHHHHHHHHCSEEEE----CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_pred             cceEEEeecCCCCCCChhhhceeeEEEEEecHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCC
Q psy17980        244 FTSEGEILA  252 (252)
Q Consensus       244 S~S~g~il~  252 (252)
                      ++++|+||.
T Consensus       201 s~s~g~iLe  209 (228)
T PF12781_consen  201 SNSEGNILE  209 (228)
T ss_dssp             CCTSSCCCC
T ss_pred             HhCCCCccC
Confidence            999999985

>KOG3595|consensus

Probab=99.93  E-value=2.6e-25  Score=237.63  Aligned_cols=161  Identities=54%  Similarity=0.908  Sum_probs=156.8

Q ss_pred             CCCCCCceEeeCCChhHHHHHHHHHHcCCeEEEecCCCCcCccchhhhhhhhhcCCCCCccccchhhhhcccccchhhhh
Q psy17980          1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACK   80 (252)
Q Consensus         1 ~~~~~~l~~~~~~~~~~~~~~e~~i~~G~~~lie~~~e~~dp~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (252)
                      +++.|++.+++++++.|++.+|+|+++|.|++++|++|.+||+|+|++.+++++                          
T Consensus      1122 ~~~~~~~~~i~~~~~~~l~~le~a~~~g~~il~~~~~e~~d~~l~~ll~~~~~~-------------------------- 1175 (1395)
T KOG3595|consen 1122 KESENKLQVISFNEKEFLRQLENALRFGEPVLIEDVNEELDPALEPLLLKETFK-------------------------- 1175 (1395)
T ss_pred             hhhhcccceeeccchhHHHHHHhHhccCCceeccchhhhhchhhhhhcccceee--------------------------
Confidence            356789999999999999999999999999999999999999999999999998                          


Q ss_pred             ccccccchhhhhhhhhhhccCCCCCcccccccccccccCccccccccCCCCCCCCCCCCCcccCCCCCeEEEEeCCeeee
Q psy17980         81 MTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVD  160 (252)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve  160 (252)
                                                                                       .||+..+++||+.++
T Consensus      1176 -----------------------------------------------------------------~g~~~~~~~gd~~~~ 1190 (1395)
T KOG3595|consen 1176 -----------------------------------------------------------------QGGRVLIKLGDKEID 1190 (1395)
T ss_pred             -----------------------------------------------------------------ccCeEeeecCceeee
Confidence                                                                             788999999999999


Q ss_pred             eCCCceEEEeecCCCCCCChhhcceeEEEEeeeChhhHHHHHHHHHHhhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17980        161 YDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNIL  240 (252)
Q Consensus       161 ynpnFRLYLtTKL~nPhy~PEV~SkvTVINFTVT~eGLEeQLLsiVV~~ErPELEeqR~eLike~ae~K~~Lk~LED~LL  240 (252)
                      ++++|++|++|+++||||.|+++++++++||++|..++++|+|+.++..|+|+++++|..|+++.++++.+|+++|+.+|
T Consensus      1191 ~~~~f~~~~~t~~~~~~~~p~~~~~~~~v~f~~t~~~l~~qll~~v~~~e~~~~~~~~~~l~~~~~~~~~~lk~le~~lL 1270 (1395)
T KOG3595|consen 1191 LNPDFRLYITTKLRNPHYLPELSARVTLVNFTVTPSGLEDQLLGSVVAIERPDLEEERSDLIKLQAEIKRQLKELEDRLL 1270 (1395)
T ss_pred             cCCCeeEEEeecccCcccChhhhhceeEEEeEechhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q psy17980        241 RLLFTSEGEILA  252 (252)
Q Consensus       241 ~~LS~S~g~il~  252 (252)
                      +.|+.++|++++
T Consensus      1271 ~~l~~s~~~~l~ 1282 (1395)
T KOG3595|consen 1271 ERLSSSEGNILE 1282 (1395)
T ss_pred             HHHhcccCcccc
Confidence            999999999874

>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton]

Probab=99.36  E-value=2.6e-12  Score=137.85  Aligned_cols=156  Identities=11%  Similarity=0.082  Sum_probs=146.0

Q ss_pred             CCceEeeCCChhHHHHHHHHHHcCCeEEEecCCCCcCccchhhhhhhhhcCCCCCccccchhhhhcccccchhhhhcccc
Q psy17980          5 NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTKG   84 (252)
Q Consensus         5 ~~l~~~~~~~~~~~~~~e~~i~~G~~~lie~~~e~~dp~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (252)
                      +.-..++|....|...+++|+|.|..++|.| +|-+||.++|++.++|.+                              
T Consensus      2503 kkail~sf~e~~f~~~L~~a~r~gs~~iI~d-aE~~d~~i~rlIk~ef~s------------------------------ 2551 (3164)
T COG5245        2503 KKAILGSFREMEFAFGLSQARREGSDKIIGD-AEALDEEIGRLIKEEFKS------------------------------ 2551 (3164)
T ss_pred             chhhhhhhhhHHHHHHHHHHHHhccceEecc-hhhhhhhhhhhhhHHHhc------------------------------
Confidence            4444567889999999999999999999999 799999999999999888                              


Q ss_pred             ccchhhhhhhhhhhccCCCCCcccccccccccccCccccccccCCCCCCCCCCCCCcccCCCCCeEEEEeCCeeeeeCCC
Q psy17980         85 FLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDPK  164 (252)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~veynpn  164 (252)
                                                                                   .+|+..+.+|+..|...-.
T Consensus      2552 -------------------------------------------------------------~~~eV~v~i~~~eI~~S~~ 2570 (3164)
T COG5245        2552 -------------------------------------------------------------NLSEVKVMINPPEIVRSTV 2570 (3164)
T ss_pred             -------------------------------------------------------------CCceEEEEECCCeeEEecc
Confidence                                                                         6688899999999999999


Q ss_pred             ceEEEeecCCCCCCChhhcceeEEEEeeeChhhHHHHHHHHHHhhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17980        165 FRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLF  244 (252)
Q Consensus       165 FRLYLtTKL~nPhy~PEV~SkvTVINFTVT~eGLEeQLLsiVV~~ErPELEeqR~eLike~ae~K~~Lk~LED~LL~~LS  244 (252)
                      |.+|..+..++-..+.-..+++.+|+|+....|+|.|+++.+++.+.|++..++..|.+..+..+.+|+.|+.+||..|.
T Consensus      2571 ~~vf~~se~~Sgdm~~~~~k~l~~v~Fvs~v~~~ET~i~d~~~~~~~~~lf~~~~~l~~lk~~~~l~L~~L~~~ll~~L~ 2650 (3164)
T COG5245        2571 EAVFWLSEGRSGDMGSIEWKQLIQVMFVSKVLGCETEIPDALEKLVSGPLFVHEKALNALKACGSLFLWVLARYLLAKLM 2650 (3164)
T ss_pred             eeEEEEeecCCCchhHHHHHHhHhhheehhhhhhhhhhhHHHHhhhccchhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            99999999998777777889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy17980        245 TSEGEILA  252 (252)
Q Consensus       245 ~S~g~il~  252 (252)
                      ++.|+++.
T Consensus      2651 ~s~~nm~~ 2658 (3164)
T COG5245        2651 LSISNMEQ 2658 (3164)
T ss_pred             hccccccc
Confidence            99999863

>PF03028 Dynein_heavy: Dynein heavy chain and region D6 of dynein motor; InterPro: IPR004273 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella

Probab=93.33  E-value=0.6  Score=47.77  Aligned_cols=106  Identities=22%  Similarity=0.363  Sum_probs=72.1

Q ss_pred             CCceEeeCCChh---HHHHHHHHHHcCCeEEEecCCCCcCccchhhhhhhhhcCCCCCccccchhhhhcccccchhhhhc
Q psy17980          5 NGLKILKLTDST---YMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKM   81 (252)
Q Consensus         5 ~~l~~~~~~~~~---~~~~~e~~i~~G~~~lie~~~e~~dp~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (252)
                      .++.++.++...   -.+.|+.|++.|.-|+|+|+  .+-|.--+.|.+.+...                          
T Consensus       145 ~~~~~islG~~~~~~a~~~l~~a~~~G~Wv~L~N~--HL~~~wl~~Le~~l~~~--------------------------  196 (707)
T PF03028_consen  145 KKLQSISLGSGQGPEAEKALKEAAKEGHWVLLQNC--HLAPSWLPQLEKKLESL--------------------------  196 (707)
T ss_dssp             --EEEEETTSHHHHHHHHHHHHHHHHTSEEEEETG--GGGCCCHHCHHHHHHC---------------------------
T ss_pred             hheeecCCCCchHHHHHHHHHHHhcCCeEEEcccc--hhHHHHHHHHHHHHhcc--------------------------
Confidence            468888887654   35779999999999999998  46676666776654441                          


Q ss_pred             cccccchhhhhhhhhhhccCCCCCcccccccccccccCccccccccCCCCCCCCCCCCCcccCCCCCeEEEEeCCeeeee
Q psy17980         82 TKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDY  161 (252)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vey  161 (252)
                                                                                      ..            +.
T Consensus       197 ----------------------------------------------------------------~~------------~~  200 (707)
T PF03028_consen  197 ----------------------------------------------------------------SP------------EI  200 (707)
T ss_dssp             ----------------------------------------------------------------SS------------TT
T ss_pred             ----------------------------------------------------------------cc------------cc
Confidence                                                                            00            45


Q ss_pred             CCCceEEEeecCCCCCCChhhcceeEEEEeeeChhhHHHHHHHHHHhhhCCcHHH
Q psy17980        162 DPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQ  216 (252)
Q Consensus       162 npnFRLYLtTKL~nPhy~PEV~SkvTVINFTVT~eGLEeQLLsiVV~~ErPELEe  216 (252)
                      |++|||||++. +.|.+|+.+..+...|-|- .+.|+..-|+...-....+.++.
T Consensus       201 h~~FRL~lt~~-~~~~~P~~lL~~s~kv~~E-~p~gik~~l~~~~~~~~~~~~~~  253 (707)
T PF03028_consen  201 HPNFRLFLTSE-PSPSFPISLLQSSIKVTYE-PPPGIKANLLRTYNSISQDFFEM  253 (707)
T ss_dssp             STT-EEEEEEE-SSTTS-HHHHHCSEEEEE----SSHHHHHHHHHCC--SCCHHH
T ss_pred             ccceEEEEEec-CcccCCHHHHHcccceeeC-ChhHHHHHHHHHHHhhhhhhhhc
Confidence            99999999884 6789999877666666555 56678888888777766666655

The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits, intermediate size subunits and small subunits (see IPR001372 from INTERPRO). This family represents the C-terminal region of dynein heavy chain. The dynein heavy chain also exhibits ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. ; GO: 0003777 microtubule motor activity, 0007018 microtubule-based movement, 0030286 dynein complex; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	252
3vkg_A	3245	X-Ray Structure Of An Mtbd Truncation Mutant Of Dyn		1e-16
3vkh_A	3367	X-Ray Structure Of A Functional Full-Length Dynein		1e-16

>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain Length = 3245

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 65/105 (61%)
Query: 147  GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
            GGR LI+LGD  VD+ P F ++L T+ P  H+ P+ C ++  +NFTVT S L+ Q + + 
Sbjct: 2257 GGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEA 2316
Query: 207  VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            ++ ERPD  ++R+ ++    + +  L+ +E ++L  L  + G IL
Sbjct: 2317 LKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNIL 2361

>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor Domain Length = 3367

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 65/105 (61%)
Query: 147  GGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADV 206
            GGR LI+LGD  VD+ P F ++L T+ P  H+ P+ C ++  +NFTVT S L+ Q + + 
Sbjct: 2379 GGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEA 2438
Query: 207  VRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
            ++ ERPD  ++R+ ++    + +  L+ +E ++L  L  + G IL
Sbjct: 2439 LKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNIL 2483

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	252
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	8e-50
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	2e-16
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	1e-47
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	4e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score =  174 bits (442), Expect = 8e-50
 Identities = 38/106 (35%), Positives = 65/106 (61%)

Query: 146  SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
             GGR LI+LGD  VD+ P F ++L T+ P  H+ P+ C ++  +NFTVT S L+ Q + +
Sbjct: 2256 KGGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHE 2315

Query: 206  VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
             ++ ERPD  ++R+ ++    + +  L+ +E ++L  L  + G IL
Sbjct: 2316 ALKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNIL 2361

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 77.6 bits (191), Expect = 2e-16
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 1    MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKT 58
              +   +      DS++M+ +E+ +R G P+L++DV E +DP L P+L K+   KG  
Sbjct: 2203 QYADKKITKTSFLDSSFMKNLESALRFGCPLLVQDV-ENIDPVLNPVLNKEIRKKGGR 2259

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score =  168 bits (427), Expect = 1e-47
 Identities = 24/106 (22%), Positives = 52/106 (49%)

Query: 146  SGGRTLIKLGDTVVDYDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMAD 205
            +G R  +++GD  VD    F+L++ +  P+         ++ L++F      +E ++   
Sbjct: 2076 AGNRVTVEIGDHEVDVSGDFKLFIHSCDPSGDIPIFLRSRVRLVHFVTNKESIETRIFDI 2135

Query: 206  VVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLLFTSEGEIL 251
             +  E  +++++R  +I    + K  LK +E  +L  L  S+G +L
Sbjct: 2136 TLTEENAEMQRKREDLIKLNTEYKLKLKNLEKRLLEELNNSQGNML 2181

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score = 71.0 bits (174), Expect = 4e-14
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 5    NGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKT 58
            N   +L   +  +++ +E  +R G  V+++D GE  DP +  ++ ++    G  
Sbjct: 2027 NKTVLLSFLEEGFVKRLENAIRFGSVVIIQD-GEFFDPIISRLISREFNHAGNR 2079

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 36/308 (11%), Positives = 75/308 (24%), Gaps = 87/308 (28%)

Query: 14  DSTYMRTMEACVRLGLPVLLEDV-GETLDPALGPILLK----------QTYTKGKTPR-- 60
           +    + +E  +R+    L+  +  E   P++   +            Q + K    R  
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 61  ---------RSYADQAYI--HGM------VFTNRACKMTKGFLSVCFLSEIKIW----TR 99
                            +   G+            C   K  +      +I  W      
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK--VQCKMDFKI-FWLNLKNC 192

Query: 100 NSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMN-------LTNFFYPPSGGRTLI 152
           NS    L   +     +           +    +  +        L            L+
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSR----SDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 153 KLGD----TVVD-YDPKFRLYLTTK-------LPNPHYLPETCIQIGLINFTVTSSGLEE 200
            L +       + ++   ++ LTT+       L        +      +  T       +
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH-SMTLTPDEV---K 304

Query: 201 QLMADVVRLERPDLEQE---------------------RNQVIVTMNKDKSMLKEIEDNI 239
            L+   +     DL +E                            +N DK  L  I ++ 
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK--LTTIIESS 362

Query: 240 LRLLFTSE 247
           L +L  +E
Sbjct: 363 LNVLEPAE 370

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	252
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	100.0
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	100.0

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A

Probab=100.00  E-value=2e-43  Score=390.73  Aligned_cols=157  Identities=22%  Similarity=0.441  Sum_probs=153.9

Q ss_pred             CCCceEeeCCChhHHHHHHHHHHcCCeEEEecCCCCcCccchhhhhhhhhcCCCCCccccchhhhhcccccchhhhhccc
Q psy17980          4 PNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACKMTK   83 (252)
Q Consensus         4 ~~~l~~~~~~~~~~~~~~e~~i~~G~~~lie~~~e~~dp~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (252)
                      +++|+|++++|++|++++|+|||+|.|||||| +|+|||+|+|||+|++++                             
T Consensus      2026 ~~~l~v~~~~d~~f~~~lE~ai~~G~pvLien-~E~lDp~L~pvL~k~~~k----------------------------- 2075 (2695)
T 4akg_A         2026 GNKTVLLSFLEEGFVKRLENAIRFGSVVIIQD-GEFFDPIISRLISREFNH----------------------------- 2075 (2695)
T ss_dssp             GGGEEEECTTSSTHHHHHHHHHHTTCEEEESC-SSSCCSTTHHHHTTCCEE-----------------------------
T ss_pred             cCCceEeeCCcHHHHHHHHHHHHcCCeEEEcc-ccccchhHHHHHhhHhhh-----------------------------
Confidence            46899999999999999999999999999999 799999999999999999                             


Q ss_pred             cccchhhhhhhhhhhccCCCCCcccccccccccccCccccccccCCCCCCCCCCCCCcccCCCCCeEEEEeCCeeeeeCC
Q psy17980         84 GFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVDYDP  163 (252)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~veynp  163 (252)
                                                                                    +||+.+|++||+.|||||
T Consensus      2076 --------------------------------------------------------------~gg~~~i~lGdk~idy~~ 2093 (2695)
T 4akg_A         2076 --------------------------------------------------------------AGNRVTVEIGDHEVDVSG 2093 (2695)
T ss_dssp             --------------------------------------------------------------CSSCEEEECSSSEEECCS
T ss_pred             --------------------------------------------------------------cCCeEEEEECCeeEecCC
Confidence                                                                          789999999999999999


Q ss_pred             CceEEEeecCCCCCCChhhcceeEEEEeeeChhhHHHHHHHHHHhhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17980        164 KFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNILRLL  243 (252)
Q Consensus       164 nFRLYLtTKL~nPhy~PEV~SkvTVINFTVT~eGLEeQLLsiVV~~ErPELEeqR~eLike~ae~K~~Lk~LED~LL~~L  243 (252)
                      +|||||+||++||||+||++++||+||||||++|||+|||+.||+.|+||||++|.+|+++++++|++|++|||+||+.|
T Consensus      2094 ~FrlyltTkl~np~y~Pei~~~vt~iNFtvT~~GLedQLL~~vv~~ErPdLE~~r~~Li~~~~~~k~~Lk~lEd~lL~~L 2173 (2695)
T 4akg_A         2094 DFKLFIHSCDPSGDIPIFLRSRVRLVHFVTNKESIETRIFDITLTEENAEMQRKREDLIKLNTEYKLKLKNLEKRLLEEL 2173 (2695)
T ss_dssp             SCEEEEEECCTTCCCCHHHHHHEEEEECCCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeeCCCCCCCCHHHHhheeEEEEEEcHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCC
Q psy17980        244 FTSEGEILA  252 (252)
Q Consensus       244 S~S~g~il~  252 (252)
                      ++|+|+||.
T Consensus      2174 s~s~GniLd 2182 (2695)
T 4akg_A         2174 NNSQGNMLE 2182 (2695)
T ss_dssp             HHSSSSCST
T ss_pred             hhCCCCccC
Confidence            999999985

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*

Probab=100.00  E-value=1.4e-43  Score=395.39  Aligned_cols=160  Identities=34%  Similarity=0.677  Sum_probs=118.3

Q ss_pred             CCCCCCceEeeCCChhHHHHHHHHHHcCCeEEEecCCCCcCccchhhhhhhhhcCCCCCccccchhhhhcccccchhhhh
Q psy17980          1 MESPNGLKILKLTDSTYMRTMEACVRLGLPVLLEDVGETLDPALGPILLKQTYTKGKTPRRSYADQAYIHGMVFTNRACK   80 (252)
Q Consensus         1 ~~~~~~l~~~~~~~~~~~~~~e~~i~~G~~~lie~~~e~~dp~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (252)
                      ||+.|+|+|++++|++|++++|+|||+|.||||||| |++||+|+|||+|++++                          
T Consensus      2203 ~~~~~~l~v~~~~d~~f~~~LE~ai~fG~pvLienv-E~lDP~L~pvL~k~~~k-------------------------- 2255 (3245)
T 3vkg_A         2203 QYADKKITKTSFLDSSFMKNLESALRFGCPLLVQDV-ENIDPVLNPVLNKEIRK-------------------------- 2255 (3245)
T ss_dssp             HTGGGCCCCCCC-----HHHHHHHHHHTCCEECCCC-C------------------------------------------
T ss_pred             HhccCCceEeecCchhHHHHHHHHHHcCCeEEEccc-cccchhHHHHHHHHHHh--------------------------
Confidence            467789999999999999999999999999999999 99999999999999999                          


Q ss_pred             ccccccchhhhhhhhhhhccCCCCCcccccccccccccCccccccccCCCCCCCCCCCCCcccCCCCCeEEEEeCCeeee
Q psy17980         81 MTKGFLSVCFLSEIKIWTRNSHHGSLFYDETRYCALSEGGHILFSLCTSGPHSPPMNLTNFFYPPSGGRTLIKLGDTVVD  160 (252)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve  160 (252)
                                                                                       +||+.+|++||+.|+
T Consensus      2256 -----------------------------------------------------------------~gg~~~I~lGdk~id 2270 (3245)
T 3vkg_A         2256 -----------------------------------------------------------------KGGRILIRLGDQDVD 2270 (3245)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -----------------------------------------------------------------cCceEEEEECCeeEe
Confidence                                                                             788999999999999


Q ss_pred             eCCCceEEEeecCCCCCCChhhcceeEEEEeeeChhhHHHHHHHHHHhhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17980        161 YDPKFRLYLTTKLPNPHYLPETCIQIGLINFTVTSSGLEEQLMADVVRLERPDLEQERNQVIVTMNKDKSMLKEIEDNIL  240 (252)
Q Consensus       161 ynpnFRLYLtTKL~nPhy~PEV~SkvTVINFTVT~eGLEeQLLsiVV~~ErPELEeqR~eLike~ae~K~~Lk~LED~LL  240 (252)
                      |+|+|||||+||++||||+||++++||+||||||++|||+|||+.||+.|+||||++|.+|+++++++|++|++|||+||
T Consensus      2271 y~~~FrlyltTkl~np~y~Pev~~kvtlINFtvT~~GLedQLL~~vv~~ErPeLE~~r~~Li~~~~~~k~~L~~LEd~lL 2350 (3245)
T 3vkg_A         2271 FSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEALKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLL 2350 (3245)
T ss_dssp             ---CCCEEEEECCTTCCCCHHHHHTSEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHHTTTHHHH
T ss_pred             cCCCceEEEEecCCCCCCCHHHHhheEEEEEEecHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q psy17980        241 RLLFTSEGEILA  252 (252)
Q Consensus       241 ~~LS~S~g~il~  252 (252)
                      +.|++|+|+||.
T Consensus      2351 ~~Ls~s~GniLd 2362 (3245)
T 3vkg_A         2351 NALSQASGNILD 2362 (3245)
T ss_dssp             HHHHTTSSCGGG
T ss_pred             HHHHhCCCcccc
Confidence            999999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00