Diaphorina citri psyllid: psy18073

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64
MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC
cccHHHHHHHHHHccHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccCECccccccHHHHHHHcccccccEEcccccCEEEcccccccccccccccccEEEcccccccccccccccccccccccccEEEEEEccccccEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEccccccccEEccEEEEcccEEEEEEccccccEEEEccccEEEEEccccCEEEEECcccccEEEEEEccccccEEEEECccccEEEEEccccCEEEEcccccccccccCEEEEEcccccEEEcccccccEEEEEEccccCEEEEEEcccccEEEEccEEEEEEccccccEEccccccccEEEEEEccccccEEEccccccEEEEEEcccccEEEEEEcccccEEEEEcccccccccEEEECccccccccccccHHHHHHHHccccccEEEEEECccccccccccccEEEEccEEEEEECcccccccccCECccccccccccccccccHHHHHHcccccEEccccccccccccccccccccccEEEcccccEEEEEcccccccccCEEEECcccccc
MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLND**E*
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MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DDB1- and CUL4-associated factor 13 Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.confidentQ5R4T8
DDB1- and CUL4-associated factor 13 Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.confidentQ6PAC3
DDB1- and CUL4-associated factor 13 Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.confidentQ5ZLK1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0080008 [CC]Cul4-RING ubiquitin ligase complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0000151, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0031461

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MKQ, chain A
Confidence level:very confident
Coverage over the Query: 165-367,381-478
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Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 153-349,382-493
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Template: 3DM0, chain A
Confidence level:very confident
Coverage over the Query: 120-339,415-493
View the alignment between query and template
View the model in PyMOL
Template: 2F1Z, chain A
Confidence level:very confident
Coverage over the Query: 482-639
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View the model in PyMOL
Template: 2F1Z, chain A
Confidence level:very confident
Coverage over the Query: 2-109
View the alignment between query and template
View the model in PyMOL
Template: 3MKQ, chain A
Confidence level:very confident
Coverage over the Query: 123-482
View the alignment between query and template
View the model in PyMOL